FFCP PHASE1:Mm9::chr4:150436922..150436948,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=145|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr4:150436922..150436948,-|id=chr4:150436922..150436948,-|ontology_enrichment_celltype=CL:0000117!1.95e-14!23;CL:0000337!1.95e-14!23;CL:0000540!2.14e-12!33;CL:0000047!2.14e-12!33;CL:0000031!2.14e-12!33;CL:0000404!2.14e-12!33;CL:0000393!7.26e-09!39;CL:0000211!7.26e-09!39;CL:0000221!5.80e-08!44;CL:0000133!5.80e-08!44;CL:0002319!1.32e-07!43|ontology_enrichment_celltype_v019_2=CL:0000117,4.37e-30,23;CL:0000337,4.37e-30,23;CL:0000540,7.75e-22,33;CL:0000047,7.75e-22,33;CL:0000031,7.75e-22,33;CL:0000404,7.75e-22,33;CL:0000393,1.06e-17,39;CL:0000211,1.06e-17,39;CL:0002319,1.37e-15,43;CL:0000221,4.03e-15,44;CL:0000133,4.03e-15,44;CL:0002610,2.96e-08,3;CL:0002612,7.57e-08,3;CL:0002321,1.01e-07,70;CL:0002614,5.79e-07,3;CL:0002613,6.68e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!1.41e-23!71;UBERON:0003075!1.41e-23!71;UBERON:0007284!1.41e-23!71;UBERON:0000033!9.33e-23!63;UBERON:0004121!4.78e-22!102;UBERON:0000924!4.78e-22!102;UBERON:0006601!4.78e-22!102;UBERON:0001017!5.57e-22!73;UBERON:0005743!5.57e-22!73;UBERON:0001049!1.31e-21!52;UBERON:0005068!1.31e-21!52;UBERON:0006241!1.31e-21!52;UBERON:0007135!1.31e-21!52;UBERON:0000073!1.93e-21!75;UBERON:0001016!1.93e-21!75;UBERON:0000955!2.87e-20!50;UBERON:0006238!2.87e-20!50;UBERON:0002616!1.20e-19!49;UBERON:0003056!8.81e-19!49;UBERON:0002020!9.95e-19!34;UBERON:0003080!9.19e-16!40;UBERON:0002780!4.84e-15!39;UBERON:0001890!4.84e-15!39;UBERON:0006240!4.84e-15!39;UBERON:0002791!8.93e-15!29;UBERON:0003528!8.93e-15!29;UBERON:0001893!8.93e-15!29;UBERON:0007811!2.94e-11!86;UBERON:0000956!7.74e-11!21;UBERON:0001869!7.74e-11!21;UBERON:0000203!7.74e-11!21;UBERON:0000153!1.91e-10!94;UBERON:0000025!1.94e-09!114;UBERON:0002021!3.14e-09!10;UBERON:0000411!3.14e-09!10;UBERON:0001950!3.14e-09!10;UBERON:0004111!4.86e-09!122;UBERON:0002619!1.66e-08!17|ontology_enrichment_uberon_v019_2=UBERON:0000073,5.45e-43,54;UBERON:0001017,3.89e-36,73;UBERON:0001049,5.65e-36,52;UBERON:0005068,5.65e-36,52;UBERON:0006241,5.65e-36,52;UBERON:0007135,5.65e-36,52;UBERON:0001016,5.96e-35,75;UBERON:0002020,9.18e-35,34;UBERON:0002346,6.63e-30,64;UBERON:0003075,6.63e-30,64;UBERON:0007284,6.63e-30,64;UBERON:0002616,4.98e-28,46;UBERON:0000955,2.73e-27,47;UBERON:0006238,2.73e-27,47;UBERON:0004121,7.73e-26,95;UBERON:0000924,7.73e-26,95;UBERON:0006601,7.73e-26,95;UBERON:0003528,1.88e-25,29;UBERON:0002791,1.88e-25,29;UBERON:0001893,1.88e-25,29;UBERON:0010371,2.90e-25,73;UBERON:0003080,2.45e-23,40;UBERON:0002780,8.80e-22,39;UBERON:0001890,8.80e-22,39;UBERON:0006240,8.80e-22,39;UBERON:0010314,2.22e-21,92;UBERON:0003056,5.43e-18,49;UBERON:0002021,1.35e-17,10;UBERON:0000411,1.35e-17,10;UBERON:0001950,1.35e-17,10;UBERON:0000956,1.56e-17,21;UBERON:0001869,1.56e-17,21;UBERON:0000203,1.56e-17,21;UBERON:0000025,1.69e-14,114;UBERON:0002619,3.33e-14,17;UBERON:0003076,3.69e-13,12;UBERON:0003057,3.69e-13,12;UBERON:0004111,4.95e-13,122;UBERON:0001948,3.20e-11,5;UBERON:0002315,3.20e-11,5;UBERON:0002240,2.80e-09,6;UBERON:0005174,2.80e-09,6;UBERON:0001137,2.80e-09,6;UBERON:0002420,5.06e-09,8;UBERON:0007245,5.06e-09,8;UBERON:0010009,5.06e-09,8;UBERON:0010011,5.06e-09,8;UBERON:0000454,5.06e-09,8;UBERON:0002950,8.64e-09,4;UBERON:0001891,8.64e-09,4;UBERON:0009616,8.64e-09,4;UBERON:0010286,8.64e-09,4;UBERON:0011216,2.54e-08,194;UBERON:0004684,2.96e-08,3;UBERON:0002275,2.96e-08,3;UBERON:0002257,7.57e-08,3;UBERON:0000483,1.57e-07,174;UBERON:0000119,2.35e-07,176;UBERON:0002038,5.79e-07,3;UBERON:0009663,5.79e-07,3;UBERON:0009661,5.79e-07,3;UBERON:0000125,5.79e-07,3;UBERON:0002308,5.79e-07,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41621522601718,3.70293685490423,0,0,0,0,0,0,0,0,0.622137673850866,1.21505344498522,1.26194976810829,1.14260393761521,2.65042249141936,0.734944795289724,1.53352753629178,0,7.70811166995721,6.12899222808901,5.9906547969935,1.45074916503213,2.65314166446988,1.56274011167028,2.51264699101243,1.12552522006336,3.51435969886663,8.2496003932627,6.12198227436143,1.67759501242771,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0.422530259330042,0,0,0,0,0,0,0.11418387971906,0,0,0,0.304465478312141,0,0.301445281105245,0.23517741427141,0,0,0,0,0,0.441683036920787,0,0,1.46390398505774,2.30391377494801,0,0,0,0,1.9472783122627,0,0.753926112677186,1.39059456153821,1.02286182932132,1.66230435647648,1.62241263067758,0,0,0,0.210441855886474,0.260240885925407,0.229902104433473,0.180062129805349,0.30140963567143,0.340182495756639,0.896796041993948,0.843315521037559,0.258703370739016,0.215567992932842,0.189106080167819,0,0,0.556094498451196,0,0,0,0,0,0,0,1.40715635988658,0.540186184383045,0.23674473558521,0.393528463494808,0.462801338662135,2.09280550275367,0.804820204198858,0.817357396570186,0.493679549740441,0.820837320395476,0.405344047729279,0.438599962275997,0.219550115291051,0.134206418760372,2.10289948564127,0.720332286654991,0,0,0.213288250535234,0.696710015581316,0,0,0,0,0,0.164698954724011,0,0,0,0,0,0.199141273254367,0,0.685491075658373,0,0.407302655690628,0.193952487167626,0.140271639780637,0.126473074248515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0.169745085775188,0,0.167506257441816,0,0,0.157635144106191,0,0.159454768657487,0,0,0,0,0,0,0,1.44495530989013,1.64096361229084,0,0.252470927204373,0,0.390438744296638,1.93881057959519,0,0,0.283076530788832,0,0.584511715822624,0.395287777946524,0.963963949265421,0.141940085208269,0.178065603667255,0,0,0,0,0,0.377210159511796,0,0,0,0,0,0.316036757935816,0,0,0,0.36012218806262,0.129358683782755,0,0,0.356737635204141,0.164549020602121,0.608929898229199,0,0,0,0,0.161464426695906,0.0603129249281559,0.238744688006273,0,0.291480836629851,0.927126510052548,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0.108005340821801,0,0,0.269728692769641,0.165306911450672,0,0,0,0,0,0,0,0,0.337912250981556,0,0,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0.167884616364078,0.386379188064381,0,0,0,0,5.0827665835536,1.38097570952153,3.43737308063638,2.57779773515531,0.685082519770642,4.5323633843382,5.40018000185445,4.05289082901798,3.17199686288943,7.24864436452548,0.207574695168353,1.19707462020309,0.170733605754134,0,0.209613162627982,0,0.44449345560323,0,0.320919209591815,0,0.50695859978048,0,0.280924522409647,0,0.0574354689556133,0,0.231768651889711,0,0,0,0,0.532427418478012,0,0.290692833264657,0.188218760830661,0.0846146078916765,0.365855945745545,0.526139422875686,0.271608227691724,1.12228454331548,0.237270036248348,0.394017929502254,0.409231043169689,0.154936841185966,0,0.249810577937946,0.233931608445408,0.214871054048298,0,0,0|short_description=p@chr4:150436922..150436948,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=145 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr4:150436922..150436948,- | |||
|description=CAGE_peak_at_chr4:150436922..150436948,- | |||
|id=chr4:150436922..150436948,- | |||
|ontology_enrichment_celltype=CL:0000117!1.95e-14!23;CL:0000337!1.95e-14!23;CL:0000540!2.14e-12!33;CL:0000047!2.14e-12!33;CL:0000031!2.14e-12!33;CL:0000404!2.14e-12!33;CL:0000393!7.26e-09!39;CL:0000211!7.26e-09!39;CL:0000221!5.80e-08!44;CL:0000133!5.80e-08!44;CL:0002319!1.32e-07!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,4.37e-30,23;CL:0000337,4.37e-30,23;CL:0000540,7.75e-22,33;CL:0000047,7.75e-22,33;CL:0000031,7.75e-22,33;CL:0000404,7.75e-22,33;CL:0000393,1.06e-17,39;CL:0000211,1.06e-17,39;CL:0002319,1.37e-15,43;CL:0000221,4.03e-15,44;CL:0000133,4.03e-15,44;CL:0002610,2.96e-08,3;CL:0002612,7.57e-08,3;CL:0002321,1.01e-07,70;CL:0002614,5.79e-07,3;CL:0002613,6.68e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!1.41e-23!71;UBERON:0003075!1.41e-23!71;UBERON:0007284!1.41e-23!71;UBERON:0000033!9.33e-23!63;UBERON:0004121!4.78e-22!102;UBERON:0000924!4.78e-22!102;UBERON:0006601!4.78e-22!102;UBERON:0001017!5.57e-22!73;UBERON:0005743!5.57e-22!73;UBERON:0001049!1.31e-21!52;UBERON:0005068!1.31e-21!52;UBERON:0006241!1.31e-21!52;UBERON:0007135!1.31e-21!52;UBERON:0000073!1.93e-21!75;UBERON:0001016!1.93e-21!75;UBERON:0000955!2.87e-20!50;UBERON:0006238!2.87e-20!50;UBERON:0002616!1.20e-19!49;UBERON:0003056!8.81e-19!49;UBERON:0002020!9.95e-19!34;UBERON:0003080!9.19e-16!40;UBERON:0002780!4.84e-15!39;UBERON:0001890!4.84e-15!39;UBERON:0006240!4.84e-15!39;UBERON:0002791!8.93e-15!29;UBERON:0003528!8.93e-15!29;UBERON:0001893!8.93e-15!29;UBERON:0007811!2.94e-11!86;UBERON:0000956!7.74e-11!21;UBERON:0001869!7.74e-11!21;UBERON:0000203!7.74e-11!21;UBERON:0000153!1.91e-10!94;UBERON:0000025!1.94e-09!114;UBERON:0002021!3.14e-09!10;UBERON:0000411!3.14e-09!10;UBERON:0001950!3.14e-09!10;UBERON:0004111!4.86e-09!122;UBERON:0002619!1.66e-08!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,5.45e-43,54;UBERON:0001017,3.89e-36,73;UBERON:0001049,5.65e-36,52;UBERON:0005068,5.65e-36,52;UBERON:0006241,5.65e-36,52;UBERON:0007135,5.65e-36,52;UBERON:0001016,5.96e-35,75;UBERON:0002020,9.18e-35,34;UBERON:0002346,6.63e-30,64;UBERON:0003075,6.63e-30,64;UBERON:0007284,6.63e-30,64;UBERON:0002616,4.98e-28,46;UBERON:0000955,2.73e-27,47;UBERON:0006238,2.73e-27,47;UBERON:0004121,7.73e-26,95;UBERON:0000924,7.73e-26,95;UBERON:0006601,7.73e-26,95;UBERON:0003528,1.88e-25,29;UBERON:0002791,1.88e-25,29;UBERON:0001893,1.88e-25,29;UBERON:0010371,2.90e-25,73;UBERON:0003080,2.45e-23,40;UBERON:0002780,8.80e-22,39;UBERON:0001890,8.80e-22,39;UBERON:0006240,8.80e-22,39;UBERON:0010314,2.22e-21,92;UBERON:0003056,5.43e-18,49;UBERON:0002021,1.35e-17,10;UBERON:0000411,1.35e-17,10;UBERON:0001950,1.35e-17,10;UBERON:0000956,1.56e-17,21;UBERON:0001869,1.56e-17,21;UBERON:0000203,1.56e-17,21;UBERON:0000025,1.69e-14,114;UBERON:0002619,3.33e-14,17;UBERON:0003076,3.69e-13,12;UBERON:0003057,3.69e-13,12;UBERON:0004111,4.95e-13,122;UBERON:0001948,3.20e-11,5;UBERON:0002315,3.20e-11,5;UBERON:0002240,2.80e-09,6;UBERON:0005174,2.80e-09,6;UBERON:0001137,2.80e-09,6;UBERON:0002420,5.06e-09,8;UBERON:0007245,5.06e-09,8;UBERON:0010009,5.06e-09,8;UBERON:0010011,5.06e-09,8;UBERON:0000454,5.06e-09,8;UBERON:0002950,8.64e-09,4;UBERON:0001891,8.64e-09,4;UBERON:0009616,8.64e-09,4;UBERON:0010286,8.64e-09,4;UBERON:0011216,2.54e-08,194;UBERON:0004684,2.96e-08,3;UBERON:0002275,2.96e-08,3;UBERON:0002257,7.57e-08,3;UBERON:0000483,1.57e-07,174;UBERON:0000119,2.35e-07,176;UBERON:0002038,5.79e-07,3;UBERON:0009663,5.79e-07,3;UBERON:0009661,5.79e-07,3;UBERON:0000125,5.79e-07,3;UBERON:0002308,5.79e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41621522601718,3.70293685490423,0,0,0,0,0,0,0,0,0.622137673850866,1.21505344498522,1.26194976810829,1.14260393761521,2.65042249141936,0.734944795289724,1.53352753629178,0,7.70811166995721,6.12899222808901,5.9906547969935,1.45074916503213,2.65314166446988,1.56274011167028,2.51264699101243,1.12552522006336,3.51435969886663,8.2496003932627,6.12198227436143,1.67759501242771,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0.422530259330042,0,0,0,0,0,0,0.11418387971906,0,0,0,0.304465478312141,0,0.301445281105245,0.23517741427141,0,0,0,0,0,0.441683036920787,0,0,1.46390398505774,2.30391377494801,0,0,0,0,1.9472783122627,0,0.753926112677186,1.39059456153821,1.02286182932132,1.66230435647648,1.62241263067758,0,0,0,0.210441855886474,0.260240885925407,0.229902104433473,0.180062129805349,0.30140963567143,0.340182495756639,0.896796041993948,0.843315521037559,0.258703370739016,0.215567992932842,0.189106080167819,0,0,0.556094498451196,0,0,0,0,0,0,0,1.40715635988658,0.540186184383045,0.23674473558521,0.393528463494808,0.462801338662135,2.09280550275367,0.804820204198858,0.817357396570186,0.493679549740441,0.820837320395476,0.405344047729279,0.438599962275997,0.219550115291051,0.134206418760372,2.10289948564127,0.720332286654991,0,0,0.213288250535234,0.696710015581316,0,0,0,0,0,0.164698954724011,0,0,0,0,0,0.199141273254367,0,0.685491075658373,0,0.407302655690628,0.193952487167626,0.140271639780637,0.126473074248515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0.169745085775188,0,0.167506257441816,0,0,0.157635144106191,0,0.159454768657487,0,0,0,0,0,0,0,1.44495530989013,1.64096361229084,0,0.252470927204373,0,0.390438744296638,1.93881057959519,0,0,0.283076530788832,0,0.584511715822624,0.395287777946524,0.963963949265421,0.141940085208269,0.178065603667255,0,0,0,0,0,0.377210159511796,0,0,0,0,0,0.316036757935816,0,0,0,0.36012218806262,0.129358683782755,0,0,0.356737635204141,0.164549020602121,0.608929898229199,0,0,0,0,0.161464426695906,0.0603129249281559,0.238744688006273,0,0.291480836629851,0.927126510052548,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0.108005340821801,0,0,0.269728692769641,0.165306911450672,0,0,0,0,0,0,0,0,0.337912250981556,0,0,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0.167884616364078,0.386379188064381,0,0,0,0,5.0827665835536,1.38097570952153,3.43737308063638,2.57779773515531,0.685082519770642,4.5323633843382,5.40018000185445,4.05289082901798,3.17199686288943,7.24864436452548,0.207574695168353,1.19707462020309,0.170733605754134,0,0.209613162627982,0,0.44449345560323,0,0.320919209591815,0,0.50695859978048,0,0.280924522409647,0,0.0574354689556133,0,0.231768651889711,0,0,0,0,0.532427418478012,0,0.290692833264657,0.188218760830661,0.0846146078916765,0.365855945745545,0.526139422875686,0.271608227691724,1.12228454331548,0.237270036248348,0.394017929502254,0.409231043169689,0.154936841185966,0,0.249810577937946,0.233931608445408,0.214871054048298,0,0,0 | |||
|short_description=p@chr4:150436922..150436948,- | |||
}} |
Latest revision as of 05:46, 5 August 2015
Short description: | p@chr4:150436922..150436948, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:150436922..150436948, - |
Coexpression cluster: | MCL_coexpression_mm9:145 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 4.37e-30 | 23 |
neuroblast (sensu Vertebrata) | 4.37e-30 | 23 |
neuron | 7.75e-22 | 33 |
neuronal stem cell | 7.75e-22 | 33 |
neuroblast | 7.75e-22 | 33 |
electrically signaling cell | 7.75e-22 | 33 |
electrically responsive cell | 1.06e-17 | 39 |
electrically active cell | 1.06e-17 | 39 |
neural cell | 1.37e-15 | 43 |
ectodermal cell | 4.03e-15 | 44 |
neurectodermal cell | 4.03e-15 | 44 |
raphe nuclei neuron | 2.96e-08 | 3 |
neuron of the ventral spinal cord | 7.57e-08 | 3 |
embryonic cell | 1.01e-07 | 70 |
neuron of the substantia nigra | 5.79e-07 | 3 |
striatum neuron | 6.68e-07 | 3 |