FFCP PHASE1:Mm9::chr6:136123290..136123321,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=362|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr6:136123290..136123321,-|id=chr6:136123290..136123321,-|ontology_enrichment_celltype=CL:0000117!2.64e-16!23;CL:0000337!2.64e-16!23;CL:0000540!2.49e-12!33;CL:0000047!2.49e-12!33;CL:0000031!2.49e-12!33;CL:0000404!2.49e-12!33;CL:0000393!3.35e-09!39;CL:0000211!3.35e-09!39;CL:0002319!1.20e-07!43;CL:0000221!2.62e-07!44;CL:0000133!2.62e-07!44|ontology_enrichment_celltype_v019_2=CL:0000117,2.68e-15,23;CL:0000337,2.68e-15,23;CL:0000540,9.64e-10,33;CL:0000047,9.64e-10,33;CL:0000031,9.64e-10,33;CL:0000404,9.64e-10,33;CL:0002610,7.75e-08,3;CL:0000393,8.57e-08,39;CL:0000211,8.57e-08,39;CL:0002612,3.65e-07,3;CL:0002319,8.36e-07,43|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!7.56e-26!73;UBERON:0005743!7.56e-26!73;UBERON:0001049!4.06e-25!52;UBERON:0005068!4.06e-25!52;UBERON:0006241!4.06e-25!52;UBERON:0007135!4.06e-25!52;UBERON:0000073!1.16e-24!75;UBERON:0001016!1.16e-24!75;UBERON:0002020!4.11e-24!34;UBERON:0000955!7.47e-24!50;UBERON:0006238!7.47e-24!50;UBERON:0002616!8.85e-23!49;UBERON:0000033!5.00e-21!63;UBERON:0002791!9.35e-20!29;UBERON:0003528!9.35e-20!29;UBERON:0001893!9.35e-20!29;UBERON:0002346!5.38e-19!71;UBERON:0003075!5.38e-19!71;UBERON:0007284!5.38e-19!71;UBERON:0003080!3.93e-18!40;UBERON:0004121!5.22e-18!102;UBERON:0000924!5.22e-18!102;UBERON:0006601!5.22e-18!102;UBERON:0003056!8.08e-18!49;UBERON:0002780!2.94e-17!39;UBERON:0001890!2.94e-17!39;UBERON:0006240!2.94e-17!39;UBERON:0000956!2.55e-13!21;UBERON:0001869!2.55e-13!21;UBERON:0000203!2.55e-13!21;UBERON:0007811!2.07e-11!86;UBERON:0002021!2.44e-11!10;UBERON:0000411!2.44e-11!10;UBERON:0001950!2.44e-11!10;UBERON:0002619!7.46e-11!17;UBERON:0000153!1.75e-10!94;UBERON:0002420!1.04e-07!8;UBERON:0007245!1.04e-07!8;UBERON:0010009!1.04e-07!8;UBERON:0010011!1.04e-07!8;UBERON:0000454!1.04e-07!8;UBERON:0003076!1.42e-07!12;UBERON:0003057!1.42e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.46e-40,54;UBERON:0001017,7.83e-37,73;UBERON:0001049,1.27e-36,52;UBERON:0005068,1.27e-36,52;UBERON:0006241,1.27e-36,52;UBERON:0007135,1.27e-36,52;UBERON:0001016,1.20e-35,75;UBERON:0002020,4.43e-34,34;UBERON:0000955,1.32e-28,47;UBERON:0006238,1.32e-28,47;UBERON:0002346,1.95e-28,64;UBERON:0003075,1.95e-28,64;UBERON:0007284,1.95e-28,64;UBERON:0002616,1.14e-26,46;UBERON:0004121,1.55e-26,95;UBERON:0000924,1.55e-26,95;UBERON:0006601,1.55e-26,95;UBERON:0003528,2.05e-25,29;UBERON:0002791,2.05e-25,29;UBERON:0001893,2.05e-25,29;UBERON:0010371,4.63e-24,73;UBERON:0003080,4.69e-24,40;UBERON:0002021,6.78e-23,10;UBERON:0000411,6.78e-23,10;UBERON:0001950,6.78e-23,10;UBERON:0002780,2.05e-22,39;UBERON:0001890,2.05e-22,39;UBERON:0006240,2.05e-22,39;UBERON:0003056,1.23e-18,49;UBERON:0002619,1.46e-18,17;UBERON:0010314,1.24e-17,92;UBERON:0000956,2.58e-17,21;UBERON:0001869,2.58e-17,21;UBERON:0000203,2.58e-17,21;UBERON:0003076,5.51e-13,12;UBERON:0003057,5.51e-13,12;UBERON:0000025,7.26e-13,114;UBERON:0002240,2.41e-12,6;UBERON:0005174,2.41e-12,6;UBERON:0001137,2.41e-12,6;UBERON:0004111,1.47e-11,122;UBERON:0001948,2.31e-10,5;UBERON:0002315,2.31e-10,5;UBERON:0002420,3.17e-09,8;UBERON:0007245,3.17e-09,8;UBERON:0010009,3.17e-09,8;UBERON:0010011,3.17e-09,8;UBERON:0000454,3.17e-09,8;UBERON:0011216,5.42e-09,194;UBERON:0004684,7.75e-08,3;UBERON:0002275,7.75e-08,3;UBERON:0002257,3.65e-07,3;UBERON:0000369,4.74e-07,5;UBERON:0002435,4.74e-07,5;UBERON:0000204,4.74e-07,5;UBERON:0010082,4.74e-07,5|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.61853168687678,1.5869729378161,0.633831403506179,0,0,0,0,0,0,0,0.207379224616955,0.405017814995072,0.630974884054146,1.14260393761521,1.32521124570968,0.61245399607477,0.287536413054709,0,4.40463523997555,4.85211884723713,2.15049146558741,0.659431438650969,1.46380229763855,1.04182674111352,0.558365998002762,2.25105044012672,2.13917546887534,1.76777151284201,3.13217697758026,2.05039390407831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46390398505774,0.83778682725382,0,0,0,0,2.84602214869163,3.66000482254901,2.51308704225729,8.16974304903699,4.09144731728529,5.194701113989,6.00292673350703,0.101839363850316,0,0,0.631325567659422,0,0,0,0,0.136072998302656,0.12811372028485,0.468508622798644,0.517406741478031,0,0.189106080167819,0,0,0,0,0.411564272815887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.8791366052324,3.60166143327496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0.167506257441816,0,0,0.157635144106191,0,0,0,0,0,0,0,0,0,3.21101179975584,1.87538698547525,0,0,0,0,0,0.477937595905104,0.222798674082394,0.849229592366497,0,0,0,9.3183181762324,0.141940085208269,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0.177340233642274,0,0,0,0,0,0,0,0.161464426695906,0,0,0,0,2.96680483216816,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183151624267265,0,0,6.21227026878773,2.76195141904306,2.86447756719698,3.95262319390481,3.42541259885321,5.2877572817279,2.02506750069542,8.10578165803597,4.53142408984205,5.1776031175182,0,0.798049746802062,0.170733605754134,0.243106717068294,0.209613162627982,0.735374033800057,0.222246727801615,0.824140228955577,0.320919209591815,0.505394423527595,0.50695859978048,0.943131706930381,0.280924522409647,0.512201219238954,0.746661096422973,1.42888107384922,0.695305955669133,0.38581844092741,0.412085900803307,0.441596760403192,0.685738504770831,0.354951612318675,0.715308569841963,0.290692833264657,0.470546902076653,0.423073039458382,0.182927972872773,0.526139422875686,0.543216455383447,0.561142271657738,0.237270036248348,0.197008964751127,0,0,0.192906610981141,1.24905288968973,0,0.859484216193193,0,0,0.463735671240843|short_description=p@chr6:136123290..136123321,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=362 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr6:136123290..136123321,- | |||
|description=CAGE_peak_at_chr6:136123290..136123321,- | |||
|id=chr6:136123290..136123321,- | |||
|ontology_enrichment_celltype=CL:0000117!2.64e-16!23;CL:0000337!2.64e-16!23;CL:0000540!2.49e-12!33;CL:0000047!2.49e-12!33;CL:0000031!2.49e-12!33;CL:0000404!2.49e-12!33;CL:0000393!3.35e-09!39;CL:0000211!3.35e-09!39;CL:0002319!1.20e-07!43;CL:0000221!2.62e-07!44;CL:0000133!2.62e-07!44 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.68e-15,23;CL:0000337,2.68e-15,23;CL:0000540,9.64e-10,33;CL:0000047,9.64e-10,33;CL:0000031,9.64e-10,33;CL:0000404,9.64e-10,33;CL:0002610,7.75e-08,3;CL:0000393,8.57e-08,39;CL:0000211,8.57e-08,39;CL:0002612,3.65e-07,3;CL:0002319,8.36e-07,43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!7.56e-26!73;UBERON:0005743!7.56e-26!73;UBERON:0001049!4.06e-25!52;UBERON:0005068!4.06e-25!52;UBERON:0006241!4.06e-25!52;UBERON:0007135!4.06e-25!52;UBERON:0000073!1.16e-24!75;UBERON:0001016!1.16e-24!75;UBERON:0002020!4.11e-24!34;UBERON:0000955!7.47e-24!50;UBERON:0006238!7.47e-24!50;UBERON:0002616!8.85e-23!49;UBERON:0000033!5.00e-21!63;UBERON:0002791!9.35e-20!29;UBERON:0003528!9.35e-20!29;UBERON:0001893!9.35e-20!29;UBERON:0002346!5.38e-19!71;UBERON:0003075!5.38e-19!71;UBERON:0007284!5.38e-19!71;UBERON:0003080!3.93e-18!40;UBERON:0004121!5.22e-18!102;UBERON:0000924!5.22e-18!102;UBERON:0006601!5.22e-18!102;UBERON:0003056!8.08e-18!49;UBERON:0002780!2.94e-17!39;UBERON:0001890!2.94e-17!39;UBERON:0006240!2.94e-17!39;UBERON:0000956!2.55e-13!21;UBERON:0001869!2.55e-13!21;UBERON:0000203!2.55e-13!21;UBERON:0007811!2.07e-11!86;UBERON:0002021!2.44e-11!10;UBERON:0000411!2.44e-11!10;UBERON:0001950!2.44e-11!10;UBERON:0002619!7.46e-11!17;UBERON:0000153!1.75e-10!94;UBERON:0002420!1.04e-07!8;UBERON:0007245!1.04e-07!8;UBERON:0010009!1.04e-07!8;UBERON:0010011!1.04e-07!8;UBERON:0000454!1.04e-07!8;UBERON:0003076!1.42e-07!12;UBERON:0003057!1.42e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.46e-40,54;UBERON:0001017,7.83e-37,73;UBERON:0001049,1.27e-36,52;UBERON:0005068,1.27e-36,52;UBERON:0006241,1.27e-36,52;UBERON:0007135,1.27e-36,52;UBERON:0001016,1.20e-35,75;UBERON:0002020,4.43e-34,34;UBERON:0000955,1.32e-28,47;UBERON:0006238,1.32e-28,47;UBERON:0002346,1.95e-28,64;UBERON:0003075,1.95e-28,64;UBERON:0007284,1.95e-28,64;UBERON:0002616,1.14e-26,46;UBERON:0004121,1.55e-26,95;UBERON:0000924,1.55e-26,95;UBERON:0006601,1.55e-26,95;UBERON:0003528,2.05e-25,29;UBERON:0002791,2.05e-25,29;UBERON:0001893,2.05e-25,29;UBERON:0010371,4.63e-24,73;UBERON:0003080,4.69e-24,40;UBERON:0002021,6.78e-23,10;UBERON:0000411,6.78e-23,10;UBERON:0001950,6.78e-23,10;UBERON:0002780,2.05e-22,39;UBERON:0001890,2.05e-22,39;UBERON:0006240,2.05e-22,39;UBERON:0003056,1.23e-18,49;UBERON:0002619,1.46e-18,17;UBERON:0010314,1.24e-17,92;UBERON:0000956,2.58e-17,21;UBERON:0001869,2.58e-17,21;UBERON:0000203,2.58e-17,21;UBERON:0003076,5.51e-13,12;UBERON:0003057,5.51e-13,12;UBERON:0000025,7.26e-13,114;UBERON:0002240,2.41e-12,6;UBERON:0005174,2.41e-12,6;UBERON:0001137,2.41e-12,6;UBERON:0004111,1.47e-11,122;UBERON:0001948,2.31e-10,5;UBERON:0002315,2.31e-10,5;UBERON:0002420,3.17e-09,8;UBERON:0007245,3.17e-09,8;UBERON:0010009,3.17e-09,8;UBERON:0010011,3.17e-09,8;UBERON:0000454,3.17e-09,8;UBERON:0011216,5.42e-09,194;UBERON:0004684,7.75e-08,3;UBERON:0002275,7.75e-08,3;UBERON:0002257,3.65e-07,3;UBERON:0000369,4.74e-07,5;UBERON:0002435,4.74e-07,5;UBERON:0000204,4.74e-07,5;UBERON:0010082,4.74e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.61853168687678,1.5869729378161,0.633831403506179,0,0,0,0,0,0,0,0.207379224616955,0.405017814995072,0.630974884054146,1.14260393761521,1.32521124570968,0.61245399607477,0.287536413054709,0,4.40463523997555,4.85211884723713,2.15049146558741,0.659431438650969,1.46380229763855,1.04182674111352,0.558365998002762,2.25105044012672,2.13917546887534,1.76777151284201,3.13217697758026,2.05039390407831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46390398505774,0.83778682725382,0,0,0,0,2.84602214869163,3.66000482254901,2.51308704225729,8.16974304903699,4.09144731728529,5.194701113989,6.00292673350703,0.101839363850316,0,0,0.631325567659422,0,0,0,0,0.136072998302656,0.12811372028485,0.468508622798644,0.517406741478031,0,0.189106080167819,0,0,0,0,0.411564272815887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.8791366052324,3.60166143327496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0.167506257441816,0,0,0.157635144106191,0,0,0,0,0,0,0,0,0,3.21101179975584,1.87538698547525,0,0,0,0,0,0.477937595905104,0.222798674082394,0.849229592366497,0,0,0,9.3183181762324,0.141940085208269,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0.177340233642274,0,0,0,0,0,0,0,0.161464426695906,0,0,0,0,2.96680483216816,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183151624267265,0,0,6.21227026878773,2.76195141904306,2.86447756719698,3.95262319390481,3.42541259885321,5.2877572817279,2.02506750069542,8.10578165803597,4.53142408984205,5.1776031175182,0,0.798049746802062,0.170733605754134,0.243106717068294,0.209613162627982,0.735374033800057,0.222246727801615,0.824140228955577,0.320919209591815,0.505394423527595,0.50695859978048,0.943131706930381,0.280924522409647,0.512201219238954,0.746661096422973,1.42888107384922,0.695305955669133,0.38581844092741,0.412085900803307,0.441596760403192,0.685738504770831,0.354951612318675,0.715308569841963,0.290692833264657,0.470546902076653,0.423073039458382,0.182927972872773,0.526139422875686,0.543216455383447,0.561142271657738,0.237270036248348,0.197008964751127,0,0,0.192906610981141,1.24905288968973,0,0.859484216193193,0,0,0.463735671240843 | |||
|short_description=p@chr6:136123290..136123321,- | |||
}} |
Latest revision as of 07:53, 5 August 2015
Short description: | p@chr6:136123290..136123321, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:136123290..136123321, - |
Coexpression cluster: | MCL_coexpression_mm9:362 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.68e-15 | 23 |
neuroblast (sensu Vertebrata) | 2.68e-15 | 23 |
neuron | 9.64e-10 | 33 |
neuronal stem cell | 9.64e-10 | 33 |
neuroblast | 9.64e-10 | 33 |
electrically signaling cell | 9.64e-10 | 33 |
raphe nuclei neuron | 7.75e-08 | 3 |
electrically responsive cell | 8.57e-08 | 39 |
electrically active cell | 8.57e-08 | 39 |
neuron of the ventral spinal cord | 3.65e-07 | 3 |
neural cell | 8.36e-07 | 43 |