FFCP PHASE1:Mm9::chr2:65405349..65405366,-: Difference between revisions
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{{FFCP|EntrezGene=20269|HGNC=|MCL_coexpression_id=13|UniProt=A2ASI5,Q3UF73|association_with_transcript=182bp_to_ENSMUST00000066432,NM_018732,uc012bwa.1_5end|description=CAGE_peak_4_at_Scn3a_5end|id=chr2:65405349..65405366,-|ontology_enrichment_celltype=CL:0000117!6.92e-17!23;CL:0000337!6.92e-17!23;CL:0000540!1.36e-12!33;CL:0000047!1.36e-12!33;CL:0000031!1.36e-12!33;CL:0000404!1.36e-12!33;CL:0000393!2.98e-09!39;CL:0000211!2.98e-09!39;CL:0002319!3.72e-08!43;CL:0000221!8.90e-08!44;CL:0000133!8.90e-08!44|ontology_enrichment_celltype_v019_2=CL:0000117,2.63e-23,23;CL:0000337,2.63e-23,23;CL:0000540,2.51e-15,33;CL:0000047,2.51e-15,33;CL:0000031,2.51e-15,33;CL:0000404,2.51e-15,33;CL:0000393,1.66e-12,39;CL:0000211,1.66e-12,39;CL:0002319,4.59e-11,43;CL:0000221,9.57e-11,44;CL:0000133,9.57e-11,44;CL:0000120,3.56e-10,3;CL:0002613,7.58e-10,3;CL:0002611,9.70e-07,2|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002020!4.42e-23!34;UBERON:0001049!4.25e-22!52;UBERON:0005068!4.25e-22!52;UBERON:0006241!4.25e-22!52;UBERON:0007135!4.25e-22!52;UBERON:0002346!1.24e-21!71;UBERON:0003075!1.24e-21!71;UBERON:0007284!1.24e-21!71;UBERON:0001017!1.61e-21!73;UBERON:0005743!1.61e-21!73;UBERON:0000073!3.47e-21!75;UBERON:0001016!3.47e-21!75;UBERON:0000955!2.08e-19!50;UBERON:0006238!2.08e-19!50;UBERON:0003080!2.11e-19!40;UBERON:0004121!5.55e-19!102;UBERON:0000924!5.55e-19!102;UBERON:0006601!5.55e-19!102;UBERON:0002791!1.11e-18!29;UBERON:0003528!1.11e-18!29;UBERON:0001893!1.11e-18!29;UBERON:0002780!1.33e-18!39;UBERON:0001890!1.33e-18!39;UBERON:0006240!1.33e-18!39;UBERON:0002616!1.40e-18!49;UBERON:0003056!2.44e-18!49;UBERON:0000033!1.37e-16!63;UBERON:0000956!1.35e-11!21;UBERON:0001869!1.35e-11!21;UBERON:0000203!1.35e-11!21;UBERON:0002619!2.95e-10!17;UBERON:0002021!6.00e-09!10;UBERON:0000411!6.00e-09!10;UBERON:0001950!6.00e-09!10;UBERON:0007811!9.25e-09!86;UBERON:0002420!1.23e-08!8;UBERON:0007245!1.23e-08!8;UBERON:0010009!1.23e-08!8;UBERON:0010011!1.23e-08!8;UBERON:0000454!1.23e-08!8;UBERON:0000153!2.46e-07!94|ontology_enrichment_uberon_v019_2=UBERON:0002020,6.64e-25,34;UBERON:0001017,7.30e-25,73;UBERON:0000073,1.69e-24,54;UBERON:0001016,4.64e-24,75;UBERON:0001049,5.51e-21,52;UBERON:0005068,5.51e-21,52;UBERON:0006241,5.51e-21,52;UBERON:0007135,5.51e-21,52;UBERON:0002420,4.25e-18,8;UBERON:0007245,4.25e-18,8;UBERON:0010009,4.25e-18,8;UBERON:0010011,4.25e-18,8;UBERON:0000454,4.25e-18,8;UBERON:0004121,7.03e-18,95;UBERON:0000924,7.03e-18,95;UBERON:0006601,7.03e-18,95;UBERON:0003080,7.15e-18,40;UBERON:0003528,2.29e-17,29;UBERON:0002791,2.29e-17,29;UBERON:0001893,2.29e-17,29;UBERON:0000955,1.24e-16,47;UBERON:0006238,1.24e-16,47;UBERON:0002780,2.94e-16,39;UBERON:0001890,2.94e-16,39;UBERON:0006240,2.94e-16,39;UBERON:0002346,3.29e-16,64;UBERON:0003075,3.29e-16,64;UBERON:0007284,3.29e-16,64;UBERON:0000369,3.92e-15,5;UBERON:0002435,3.92e-15,5;UBERON:0000204,3.92e-15,5;UBERON:0010082,3.92e-15,5;UBERON:0002616,4.61e-15,46;UBERON:0003056,6.46e-14,49;UBERON:0010371,1.17e-13,73;UBERON:0001948,5.77e-10,5;UBERON:0002315,5.77e-10,5;UBERON:0010314,6.50e-10,92;UBERON:0002240,2.62e-08,6;UBERON:0005174,2.62e-08,6;UBERON:0001137,2.62e-08,6;UBERON:0002619,1.59e-07,17;UBERON:0002950,2.77e-07,4;UBERON:0001891,2.77e-07,4;UBERON:0009616,2.77e-07,4;UBERON:0010286,2.77e-07,4;UBERON:0002021,3.26e-07,10;UBERON:0000411,3.26e-07,10;UBERON:0001950,3.26e-07,10;UBERON:0000025,3.81e-07,114;UBERON:0002256,9.70e-07,2|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0.0992909512008853,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.22548106945558,2.11596391708813,3.1691570175309,0,0,0,0,0,0,0,0.207379224616955,0.135005938331691,0.420649922702764,1.14260393761521,1.54607978666129,0.61245399607477,0.479227355091182,0.919218786610021,0,1.40456071893706,1.0752457327937,3.42904348098504,3.47653045689157,1.04182674111352,0.837548997004143,2.25105044012672,2.13917546887534,0.589257170947335,4.12877874317399,1.4911955666024,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148442139064825,0,0.304465478312141,0.230615497256059,0.150722640552623,0.352766121407114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04853447583376,2.28750301409313,1.13088916901578,0.347648640384553,0.511430914660661,1.24672826735736,0.648965052271031,0,0,0,0,0,0.459804208866946,0,0.30140963567143,0.204109497453984,0.2562274405697,0.0937017245597288,0,0,0.189106080167819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,1.05144974282064,1.3377599609307,0,0,0,0,0.128867461322093,0.201683524623343,0.22237804384487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0.327726629431476,0.690739927463582,0.144649058581512,0,0,0,0.275936746304732,0.481651769963376,0.703270119553219,0,0,0,0,0.861693590931196,0,0.222798674082394,0,0,0.876767573733936,0,1.28528526568723,0,0,0.162886959353576,0.164970122972535,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,1.7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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:20269 | |||
|HGNC= | |||
|MCL_coexpression_id=13 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:A2ASI5,uniprot:Q3UF73 | |||
|association_with_transcript=182bp_to_ENSMUST00000066432,NM_018732,uc012bwa.1_5end | |||
|cluster_id=chr2:65405349..65405366,- | |||
|description=CAGE_peak_4_at_Scn3a_5end | |||
|id=chr2:65405349..65405366,- | |||
|ontology_enrichment_celltype=CL:0000117!6.92e-17!23;CL:0000337!6.92e-17!23;CL:0000540!1.36e-12!33;CL:0000047!1.36e-12!33;CL:0000031!1.36e-12!33;CL:0000404!1.36e-12!33;CL:0000393!2.98e-09!39;CL:0000211!2.98e-09!39;CL:0002319!3.72e-08!43;CL:0000221!8.90e-08!44;CL:0000133!8.90e-08!44 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.63e-23,23;CL:0000337,2.63e-23,23;CL:0000540,2.51e-15,33;CL:0000047,2.51e-15,33;CL:0000031,2.51e-15,33;CL:0000404,2.51e-15,33;CL:0000393,1.66e-12,39;CL:0000211,1.66e-12,39;CL:0002319,4.59e-11,43;CL:0000221,9.57e-11,44;CL:0000133,9.57e-11,44;CL:0000120,3.56e-10,3;CL:0002613,7.58e-10,3;CL:0002611,9.70e-07,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!4.42e-23!34;UBERON:0001049!4.25e-22!52;UBERON:0005068!4.25e-22!52;UBERON:0006241!4.25e-22!52;UBERON:0007135!4.25e-22!52;UBERON:0002346!1.24e-21!71;UBERON:0003075!1.24e-21!71;UBERON:0007284!1.24e-21!71;UBERON:0001017!1.61e-21!73;UBERON:0005743!1.61e-21!73;UBERON:0000073!3.47e-21!75;UBERON:0001016!3.47e-21!75;UBERON:0000955!2.08e-19!50;UBERON:0006238!2.08e-19!50;UBERON:0003080!2.11e-19!40;UBERON:0004121!5.55e-19!102;UBERON:0000924!5.55e-19!102;UBERON:0006601!5.55e-19!102;UBERON:0002791!1.11e-18!29;UBERON:0003528!1.11e-18!29;UBERON:0001893!1.11e-18!29;UBERON:0002780!1.33e-18!39;UBERON:0001890!1.33e-18!39;UBERON:0006240!1.33e-18!39;UBERON:0002616!1.40e-18!49;UBERON:0003056!2.44e-18!49;UBERON:0000033!1.37e-16!63;UBERON:0000956!1.35e-11!21;UBERON:0001869!1.35e-11!21;UBERON:0000203!1.35e-11!21;UBERON:0002619!2.95e-10!17;UBERON:0002021!6.00e-09!10;UBERON:0000411!6.00e-09!10;UBERON:0001950!6.00e-09!10;UBERON:0007811!9.25e-09!86;UBERON:0002420!1.23e-08!8;UBERON:0007245!1.23e-08!8;UBERON:0010009!1.23e-08!8;UBERON:0010011!1.23e-08!8;UBERON:0000454!1.23e-08!8;UBERON:0000153!2.46e-07!94 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,6.64e-25,34;UBERON:0001017,7.30e-25,73;UBERON:0000073,1.69e-24,54;UBERON:0001016,4.64e-24,75;UBERON:0001049,5.51e-21,52;UBERON:0005068,5.51e-21,52;UBERON:0006241,5.51e-21,52;UBERON:0007135,5.51e-21,52;UBERON:0002420,4.25e-18,8;UBERON:0007245,4.25e-18,8;UBERON:0010009,4.25e-18,8;UBERON:0010011,4.25e-18,8;UBERON:0000454,4.25e-18,8;UBERON:0004121,7.03e-18,95;UBERON:0000924,7.03e-18,95;UBERON:0006601,7.03e-18,95;UBERON:0003080,7.15e-18,40;UBERON:0003528,2.29e-17,29;UBERON:0002791,2.29e-17,29;UBERON:0001893,2.29e-17,29;UBERON:0000955,1.24e-16,47;UBERON:0006238,1.24e-16,47;UBERON:0002780,2.94e-16,39;UBERON:0001890,2.94e-16,39;UBERON:0006240,2.94e-16,39;UBERON:0002346,3.29e-16,64;UBERON:0003075,3.29e-16,64;UBERON:0007284,3.29e-16,64;UBERON:0000369,3.92e-15,5;UBERON:0002435,3.92e-15,5;UBERON:0000204,3.92e-15,5;UBERON:0010082,3.92e-15,5;UBERON:0002616,4.61e-15,46;UBERON:0003056,6.46e-14,49;UBERON:0010371,1.17e-13,73;UBERON:0001948,5.77e-10,5;UBERON:0002315,5.77e-10,5;UBERON:0010314,6.50e-10,92;UBERON:0002240,2.62e-08,6;UBERON:0005174,2.62e-08,6;UBERON:0001137,2.62e-08,6;UBERON:0002619,1.59e-07,17;UBERON:0002950,2.77e-07,4;UBERON:0001891,2.77e-07,4;UBERON:0009616,2.77e-07,4;UBERON:0010286,2.77e-07,4;UBERON:0002021,3.26e-07,10;UBERON:0000411,3.26e-07,10;UBERON:0001950,3.26e-07,10;UBERON:0000025,3.81e-07,114;UBERON:0002256,9.70e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0.0992909512008853,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.22548106945558,2.11596391708813,3.1691570175309,0,0,0,0,0,0,0,0.207379224616955,0.135005938331691,0.420649922702764,1.14260393761521,1.54607978666129,0.61245399607477,0.479227355091182,0.919218786610021,0,1.40456071893706,1.0752457327937,3.42904348098504,3.47653045689157,1.04182674111352,0.837548997004143,2.25105044012672,2.13917546887534,0.589257170947335,4.12877874317399,1.4911955666024,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148442139064825,0,0.304465478312141,0.230615497256059,0.150722640552623,0.352766121407114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04853447583376,2.28750301409313,1.13088916901578,0.347648640384553,0.511430914660661,1.24672826735736,0.648965052271031,0,0,0,0,0,0.459804208866946,0,0.30140963567143,0.204109497453984,0.2562274405697,0.0937017245597288,0,0,0.189106080167819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,1.05144974282064,1.3377599609307,0,0,0,0,0.128867461322093,0.201683524623343,0.22237804384487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0.327726629431476,0.690739927463582,0.144649058581512,0,0,0,0.275936746304732,0.481651769963376,0.703270119553219,0,0,0,0,0.861693590931196,0,0.222798674082394,0,0,0.876767573733936,0,1.28528526568723,0,0,0.162886959353576,0.164970122972535,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,1.70219802876894,0,0,0,0.177340233642274,0,0.329098041204242,0.304464949114599,0,0,0,0,0,0,0.119372344003136,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209088296014469,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,1.12950368523413,3.22227665555024,1.14579102687879,2.06223818812425,0.685082519770642,0.755393897389701,0.675022500231806,1.35096360967266,0.906284817968409,0.51776031175182,0,0.798049746802062,1.02440163452481,0.729320151204882,1.04806581313991,0.183843508450014,0.888986911206461,0.618105171716683,0.64183841918363,0.252697211763798,0.25347929989024,0.565879024158229,0.37456602987953,0.320125762024346,0.34461281373368,1.42888107384922,0.115884325944855,0.77163688185482,0.824171801606613,0.147198920134397,1.02860775715625,0.70990322463735,0.715308569841963,0.436039249896986,0.282328141245992,0.25384382367503,0.182927972872773,0,0.271608227691724,0.561142271657738,0.593175090620871,0.197008964751127,0.409231043169689,0.309873682371932,0.578719832943424,0,0.233931608445408,0.429742108096597,0.382576664137687,0,0.463735671240843 | |||
|short_description=p4@Scn3a | |||
}} |
Revision as of 08:23, 5 August 2015
Short description: | p4@Scn3a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Scn3a_5end |
Coexpression cluster: | MCL_coexpression_mm9:13 |
Association with transcript: | 182bp_to_ENSMUST00000066432, NM_018732, uc012bwa.1_5end |
EntrezGene: | 20269 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.63e-23 | 23 |
neuroblast (sensu Vertebrata) | 2.63e-23 | 23 |
neuron | 2.51e-15 | 33 |
neuronal stem cell | 2.51e-15 | 33 |
neuroblast | 2.51e-15 | 33 |
electrically signaling cell | 2.51e-15 | 33 |
electrically responsive cell | 1.66e-12 | 39 |
electrically active cell | 1.66e-12 | 39 |
neural cell | 4.59e-11 | 43 |
ectodermal cell | 9.57e-11 | 44 |
neurectodermal cell | 9.57e-11 | 44 |
granule cell | 3.56e-10 | 3 |
striatum neuron | 7.58e-10 | 3 |
neuron of the dorsal spinal cord | 9.70e-07 | 2 |