FFCP PHASE1:Mm9::chr6:30754185..30754209,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=145|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr6:30754185..30754209,+|id=chr6:30754185..30754209,+|ontology_enrichment_celltype=CL:0000117!7.87e-10!23;CL:0000337!7.87e-10!23|ontology_enrichment_celltype_v019_2=CL:0000117,4.09e-15,23;CL:0000337,4.09e-15,23;CL:0000540,1.72e-09,33;CL:0000047,1.72e-09,33;CL:0000031,1.72e-09,33;CL:0000404,1.72e-09,33;CL:0000393,1.59e-07,39;CL:0000211,1.59e-07,39;CL:0002610,1.90e-07,3;CL:0002614,3.22e-07,3;CL:0002612,6.21e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!8.09e-16!52;UBERON:0005068!8.09e-16!52;UBERON:0006241!8.09e-16!52;UBERON:0007135!8.09e-16!52;UBERON:0000033!9.00e-16!63;UBERON:0002020!9.10e-16!34;UBERON:0002346!1.78e-15!71;UBERON:0003075!1.78e-15!71;UBERON:0007284!1.78e-15!71;UBERON:0000955!8.79e-15!50;UBERON:0006238!8.79e-15!50;UBERON:0003056!2.92e-14!49;UBERON:0002616!3.72e-14!49;UBERON:0002791!1.81e-12!29;UBERON:0003528!1.81e-12!29;UBERON:0001893!1.81e-12!29;UBERON:0001017!2.29e-12!73;UBERON:0005743!2.29e-12!73;UBERON:0003080!7.41e-12!40;UBERON:0004121!1.26e-11!102;UBERON:0000924!1.26e-11!102;UBERON:0006601!1.26e-11!102;UBERON:0000073!1.38e-11!75;UBERON:0001016!1.38e-11!75;UBERON:0000025!1.54e-11!114;UBERON:0002780!3.74e-11!39;UBERON:0001890!3.74e-11!39;UBERON:0006240!3.74e-11!39;UBERON:0004111!8.26e-10!122;UBERON:0002021!4.94e-09!10;UBERON:0000411!4.94e-09!10;UBERON:0001950!4.94e-09!10;UBERON:0002619!1.05e-07!17;UBERON:0007811!1.06e-07!86;UBERON:0002420!1.73e-07!8;UBERON:0007245!1.73e-07!8;UBERON:0010009!1.73e-07!8;UBERON:0010011!1.73e-07!8;UBERON:0000454!1.73e-07!8;UBERON:0000956!5.37e-07!21;UBERON:0001869!5.37e-07!21;UBERON:0000203!5.37e-07!21|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.07e-26,54;UBERON:0001017,4.62e-24,73;UBERON:0001049,2.64e-23,52;UBERON:0005068,2.64e-23,52;UBERON:0006241,2.64e-23,52;UBERON:0007135,2.64e-23,52;UBERON:0001016,3.35e-23,75;UBERON:0002020,2.13e-22,34;UBERON:0002346,1.47e-20,64;UBERON:0003075,1.47e-20,64;UBERON:0007284,1.47e-20,64;UBERON:0004121,4.90e-19,95;UBERON:0000924,4.90e-19,95;UBERON:0006601,4.90e-19,95;UBERON:0000955,3.59e-18,47;UBERON:0006238,3.59e-18,47;UBERON:0003528,3.00e-17,29;UBERON:0002791,3.00e-17,29;UBERON:0001893,3.00e-17,29;UBERON:0010371,4.05e-17,73;UBERON:0002616,5.60e-17,46;UBERON:0003080,1.90e-16,40;UBERON:0002021,8.64e-16,10;UBERON:0000411,8.64e-16,10;UBERON:0001950,8.64e-16,10;UBERON:0003056,3.16e-15,49;UBERON:0002780,4.51e-15,39;UBERON:0001890,4.51e-15,39;UBERON:0006240,4.51e-15,39;UBERON:0010314,4.35e-12,92;UBERON:0002619,1.57e-10,17;UBERON:0000956,9.18e-10,21;UBERON:0001869,9.18e-10,21;UBERON:0000203,9.18e-10,21;UBERON:0002420,1.75e-09,8;UBERON:0007245,1.75e-09,8;UBERON:0010009,1.75e-09,8;UBERON:0010011,1.75e-09,8;UBERON:0000454,1.75e-09,8;UBERON:0002950,4.23e-09,4;UBERON:0001891,4.23e-09,4;UBERON:0009616,4.23e-09,4;UBERON:0010286,4.23e-09,4;UBERON:0000025,1.28e-08,114;UBERON:0002240,1.48e-08,6;UBERON:0005174,1.48e-08,6;UBERON:0001137,1.48e-08,6;UBERON:0004111,1.34e-07,122;UBERON:0003076,1.47e-07,12;UBERON:0003057,1.47e-07,12;UBERON:0004684,1.90e-07,3;UBERON:0002275,1.90e-07,3;UBERON:0002038,3.22e-07,3;UBERON:0009663,3.22e-07,3;UBERON:0009661,3.22e-07,3;UBERON:0000125,3.22e-07,3;UBERON:0002308,3.22e-07,3;UBERON:0002257,6.21e-07,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.61853168687678,2.11596391708813,0,0,0,0,0,0,0,0,0,0.135005938331691,0,1.42825492201902,0.441737081903227,0.244981598429908,0.287536413054709,0,3.30347642998166,3.70293280447044,7.52672012955593,0.923204014111357,3.84248103130121,5.73004707612436,1.67509799400829,3.93933827022176,13.5990440521361,6.18720029494702,3.41692033917847,1.4911955666024,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0,0,0,0.304465478312141,0,0.150722640552623,0.352766121407114,0,0,0,0,0.161766849947409,0.220841518460394,0,0,0,0.83778682725382,0,0,0,0,3.59497534571574,0.915001205637253,3.01570445070875,1.56441888173049,3.58001640262463,3.1168206683934,2.75810147215188,0.101839363850316,0,0,0.631325567659422,0.130120442962704,0,0.360124259610698,0.60281927134286,0.340182495756639,1.15302348256365,0.187403449119458,1.03481348295606,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0,0.234526059981096,0,0,0.393528463494808,0.154267112887378,0.697601834251224,0.268273401399619,0.700592054203017,0.658239399653922,0.656669856316381,0.486412857275134,0.146199987425332,0.219550115291051,0,0.841159794256509,2.6755199218614,0,0,0,0.464473343720877,0,0,0,0,0,0,0,0,0,0,0.216138049874694,0.199141273254367,0,0,0,0.203651327845314,0.193952487167626,0.561086559122548,0.126473074248515,0.295220295959204,0.156998727841375,0,0,0,0,0.224862112384854,0,0,0,0,0.810676133875177,0.274561413188081,4.31304619582064,0.372140947668503,0.312037673114561,0,0,0,0,0,0,0,0.469380496577004,0.335012514883631,0,1.75620283072019,0.788175720530955,0.8858587585951,0.797273843287435,0.81931657357869,0.172684981865896,0.289298117163023,0,0,0,0,3.37156238974363,1.99259867206745,0,0,0,0,0,0,0,0,0,0,0,1.60660658210904,0,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0,0.178368817602071,0.329098041204242,0,0,0.847328283455281,0,0,0.161464426695906,0.0603129249281559,0.119372344003136,0,0,4.63563255026274,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0.404593039154462,0,0,0,0,0,0,0,0,0,0,0.234714477291508,0,0,0,0,0,0,0,0,0.179026695667481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.7770221114048,3.68260189205742,2.29158205375759,1.71853182343688,5.48066015816514,3.0215755895588,1.35004500046361,0.900642406448441,3.17199686288943,4.14208249401456,0.103787347584177,0,0,0.243106717068294,0.209613162627982,0.183843508450014,1.33348036680969,0.412070114477788,0,0,0.25347929989024,0.188626341386076,0.280924522409647,0.320125762024346,0.287177344778066,0,0.347652977834566,0.77163688185482,0,0.441596760403192,1.02860775715625,1.59728225543404,0.715308569841963,0.581385666529314,0.0941093804153306,0.676916863133412,1.09756783723664,2.10455769150274,0.407412341537585,1.68342681497322,0.593175090620871,1.18205378850676,1.22769312950907,0.464810523557898,0.192906610981141,0.499621155875892,0.233931608445408,0.859484216193193,0.382576664137687,0,0|short_description=p@chr6:30754185..30754209,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=145 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr6:30754185..30754209,+ | |||
|description=CAGE_peak_at_chr6:30754185..30754209,+ | |||
|id=chr6:30754185..30754209,+ | |||
|ontology_enrichment_celltype=CL:0000117!7.87e-10!23;CL:0000337!7.87e-10!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,4.09e-15,23;CL:0000337,4.09e-15,23;CL:0000540,1.72e-09,33;CL:0000047,1.72e-09,33;CL:0000031,1.72e-09,33;CL:0000404,1.72e-09,33;CL:0000393,1.59e-07,39;CL:0000211,1.59e-07,39;CL:0002610,1.90e-07,3;CL:0002614,3.22e-07,3;CL:0002612,6.21e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!8.09e-16!52;UBERON:0005068!8.09e-16!52;UBERON:0006241!8.09e-16!52;UBERON:0007135!8.09e-16!52;UBERON:0000033!9.00e-16!63;UBERON:0002020!9.10e-16!34;UBERON:0002346!1.78e-15!71;UBERON:0003075!1.78e-15!71;UBERON:0007284!1.78e-15!71;UBERON:0000955!8.79e-15!50;UBERON:0006238!8.79e-15!50;UBERON:0003056!2.92e-14!49;UBERON:0002616!3.72e-14!49;UBERON:0002791!1.81e-12!29;UBERON:0003528!1.81e-12!29;UBERON:0001893!1.81e-12!29;UBERON:0001017!2.29e-12!73;UBERON:0005743!2.29e-12!73;UBERON:0003080!7.41e-12!40;UBERON:0004121!1.26e-11!102;UBERON:0000924!1.26e-11!102;UBERON:0006601!1.26e-11!102;UBERON:0000073!1.38e-11!75;UBERON:0001016!1.38e-11!75;UBERON:0000025!1.54e-11!114;UBERON:0002780!3.74e-11!39;UBERON:0001890!3.74e-11!39;UBERON:0006240!3.74e-11!39;UBERON:0004111!8.26e-10!122;UBERON:0002021!4.94e-09!10;UBERON:0000411!4.94e-09!10;UBERON:0001950!4.94e-09!10;UBERON:0002619!1.05e-07!17;UBERON:0007811!1.06e-07!86;UBERON:0002420!1.73e-07!8;UBERON:0007245!1.73e-07!8;UBERON:0010009!1.73e-07!8;UBERON:0010011!1.73e-07!8;UBERON:0000454!1.73e-07!8;UBERON:0000956!5.37e-07!21;UBERON:0001869!5.37e-07!21;UBERON:0000203!5.37e-07!21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.07e-26,54;UBERON:0001017,4.62e-24,73;UBERON:0001049,2.64e-23,52;UBERON:0005068,2.64e-23,52;UBERON:0006241,2.64e-23,52;UBERON:0007135,2.64e-23,52;UBERON:0001016,3.35e-23,75;UBERON:0002020,2.13e-22,34;UBERON:0002346,1.47e-20,64;UBERON:0003075,1.47e-20,64;UBERON:0007284,1.47e-20,64;UBERON:0004121,4.90e-19,95;UBERON:0000924,4.90e-19,95;UBERON:0006601,4.90e-19,95;UBERON:0000955,3.59e-18,47;UBERON:0006238,3.59e-18,47;UBERON:0003528,3.00e-17,29;UBERON:0002791,3.00e-17,29;UBERON:0001893,3.00e-17,29;UBERON:0010371,4.05e-17,73;UBERON:0002616,5.60e-17,46;UBERON:0003080,1.90e-16,40;UBERON:0002021,8.64e-16,10;UBERON:0000411,8.64e-16,10;UBERON:0001950,8.64e-16,10;UBERON:0003056,3.16e-15,49;UBERON:0002780,4.51e-15,39;UBERON:0001890,4.51e-15,39;UBERON:0006240,4.51e-15,39;UBERON:0010314,4.35e-12,92;UBERON:0002619,1.57e-10,17;UBERON:0000956,9.18e-10,21;UBERON:0001869,9.18e-10,21;UBERON:0000203,9.18e-10,21;UBERON:0002420,1.75e-09,8;UBERON:0007245,1.75e-09,8;UBERON:0010009,1.75e-09,8;UBERON:0010011,1.75e-09,8;UBERON:0000454,1.75e-09,8;UBERON:0002950,4.23e-09,4;UBERON:0001891,4.23e-09,4;UBERON:0009616,4.23e-09,4;UBERON:0010286,4.23e-09,4;UBERON:0000025,1.28e-08,114;UBERON:0002240,1.48e-08,6;UBERON:0005174,1.48e-08,6;UBERON:0001137,1.48e-08,6;UBERON:0004111,1.34e-07,122;UBERON:0003076,1.47e-07,12;UBERON:0003057,1.47e-07,12;UBERON:0004684,1.90e-07,3;UBERON:0002275,1.90e-07,3;UBERON:0002038,3.22e-07,3;UBERON:0009663,3.22e-07,3;UBERON:0009661,3.22e-07,3;UBERON:0000125,3.22e-07,3;UBERON:0002308,3.22e-07,3;UBERON:0002257,6.21e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.61853168687678,2.11596391708813,0,0,0,0,0,0,0,0,0,0.135005938331691,0,1.42825492201902,0.441737081903227,0.244981598429908,0.287536413054709,0,3.30347642998166,3.70293280447044,7.52672012955593,0.923204014111357,3.84248103130121,5.73004707612436,1.67509799400829,3.93933827022176,13.5990440521361,6.18720029494702,3.41692033917847,1.4911955666024,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0,0,0,0.304465478312141,0,0.150722640552623,0.352766121407114,0,0,0,0,0.161766849947409,0.220841518460394,0,0,0,0.83778682725382,0,0,0,0,3.59497534571574,0.915001205637253,3.01570445070875,1.56441888173049,3.58001640262463,3.1168206683934,2.75810147215188,0.101839363850316,0,0,0.631325567659422,0.130120442962704,0,0.360124259610698,0.60281927134286,0.340182495756639,1.15302348256365,0.187403449119458,1.03481348295606,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0,0.234526059981096,0,0,0.393528463494808,0.154267112887378,0.697601834251224,0.268273401399619,0.700592054203017,0.658239399653922,0.656669856316381,0.486412857275134,0.146199987425332,0.219550115291051,0,0.841159794256509,2.6755199218614,0,0,0,0.464473343720877,0,0,0,0,0,0,0,0,0,0,0.216138049874694,0.199141273254367,0,0,0,0.203651327845314,0.193952487167626,0.561086559122548,0.126473074248515,0.295220295959204,0.156998727841375,0,0,0,0,0.224862112384854,0,0,0,0,0.810676133875177,0.274561413188081,4.31304619582064,0.372140947668503,0.312037673114561,0,0,0,0,0,0,0,0.469380496577004,0.335012514883631,0,1.75620283072019,0.788175720530955,0.8858587585951,0.797273843287435,0.81931657357869,0.172684981865896,0.289298117163023,0,0,0,0,3.37156238974363,1.99259867206745,0,0,0,0,0,0,0,0,0,0,0,1.60660658210904,0,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0,0.178368817602071,0.329098041204242,0,0,0.847328283455281,0,0,0.161464426695906,0.0603129249281559,0.119372344003136,0,0,4.63563255026274,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0.404593039154462,0,0,0,0,0,0,0,0,0,0,0.234714477291508,0,0,0,0,0,0,0,0,0.179026695667481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.7770221114048,3.68260189205742,2.29158205375759,1.71853182343688,5.48066015816514,3.0215755895588,1.35004500046361,0.900642406448441,3.17199686288943,4.14208249401456,0.103787347584177,0,0,0.243106717068294,0.209613162627982,0.183843508450014,1.33348036680969,0.412070114477788,0,0,0.25347929989024,0.188626341386076,0.280924522409647,0.320125762024346,0.287177344778066,0,0.347652977834566,0.77163688185482,0,0.441596760403192,1.02860775715625,1.59728225543404,0.715308569841963,0.581385666529314,0.0941093804153306,0.676916863133412,1.09756783723664,2.10455769150274,0.407412341537585,1.68342681497322,0.593175090620871,1.18205378850676,1.22769312950907,0.464810523557898,0.192906610981141,0.499621155875892,0.233931608445408,0.859484216193193,0.382576664137687,0,0 | |||
|short_description=p@chr6:30754185..30754209,+ | |||
}} |
Latest revision as of 13:46, 5 August 2015
Short description: | p@chr6:30754185..30754209, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:30754185..30754209, + |
Coexpression cluster: | MCL_coexpression_mm9:145 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 4.09e-15 | 23 |
neuroblast (sensu Vertebrata) | 4.09e-15 | 23 |
neuron | 1.72e-09 | 33 |
neuronal stem cell | 1.72e-09 | 33 |
neuroblast | 1.72e-09 | 33 |
electrically signaling cell | 1.72e-09 | 33 |
electrically responsive cell | 1.59e-07 | 39 |
electrically active cell | 1.59e-07 | 39 |
raphe nuclei neuron | 1.90e-07 | 3 |
neuron of the substantia nigra | 3.22e-07 | 3 |
neuron of the ventral spinal cord | 6.21e-07 | 3 |