FFCP PHASE1:Mm9::chr7:82453165..82453224,-: Difference between revisions
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{{FFCP|EntrezGene=64176|HGNC=|MCL_coexpression_id=2|UniProt=Q8BG39|association_with_transcript=47bp_to_ENSMUST00000085164,NM_001109753,uc009hwk.2,uc009hwm.2_5end|description=CAGE_peak_1_at_Sv2b_5end|id=chr7:82453165..82453224,-|ontology_enrichment_celltype=CL:0000117!5.49e-10!23;CL:0000337!5.49e-10!23;CL:0000540!1.55e-09!33;CL:0000047!1.55e-09!33;CL:0000031!1.55e-09!33;CL:0000404!1.55e-09!33|ontology_enrichment_celltype_v019_2=CL:0000117,8.41e-11,23;CL:0000337,8.41e-11,23;CL:0000540,9.72e-07,33;CL:0000047,9.72e-07,33;CL:0000031,9.72e-07,33;CL:0000404,9.72e-07,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!1.89e-20!102;UBERON:0000924!1.89e-20!102;UBERON:0006601!1.89e-20!102;UBERON:0000073!3.37e-20!75;UBERON:0001016!3.37e-20!75;UBERON:0000033!4.23e-20!63;UBERON:0001017!9.23e-20!73;UBERON:0005743!9.23e-20!73;UBERON:0002346!2.99e-19!71;UBERON:0003075!2.99e-19!71;UBERON:0007284!2.99e-19!71;UBERON:0001049!1.18e-17!52;UBERON:0005068!1.18e-17!52;UBERON:0006241!1.18e-17!52;UBERON:0007135!1.18e-17!52;UBERON:0003056!1.62e-17!49;UBERON:0000955!1.30e-16!50;UBERON:0006238!1.30e-16!50;UBERON:0002616!5.78e-16!49;UBERON:0002020!1.61e-15!34;UBERON:0003080!6.69e-13!40;UBERON:0002791!1.35e-12!29;UBERON:0003528!1.35e-12!29;UBERON:0001893!1.35e-12!29;UBERON:0002780!2.61e-12!39;UBERON:0001890!2.61e-12!39;UBERON:0006240!2.61e-12!39;UBERON:0007811!3.71e-11!86;UBERON:0000153!4.07e-11!94;UBERON:0002021!3.25e-09!10;UBERON:0000411!3.25e-09!10;UBERON:0001950!3.25e-09!10;UBERON:0000956!1.89e-08!21;UBERON:0001869!1.89e-08!21;UBERON:0000203!1.89e-08!21;UBERON:0002619!1.74e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0002346,8.76e-27,64;UBERON:0003075,8.76e-27,64;UBERON:0007284,8.76e-27,64;UBERON:0000073,1.50e-23,54;UBERON:0004121,1.99e-22,95;UBERON:0000924,1.99e-22,95;UBERON:0006601,1.99e-22,95;UBERON:0001049,1.06e-21,52;UBERON:0005068,1.06e-21,52;UBERON:0006241,1.06e-21,52;UBERON:0007135,1.06e-21,52;UBERON:0010371,1.45e-21,73;UBERON:0001016,7.98e-21,75;UBERON:0003056,1.04e-20,49;UBERON:0001017,1.36e-20,73;UBERON:0002020,1.22e-19,34;UBERON:0000955,1.67e-17,47;UBERON:0006238,1.67e-17,47;UBERON:0002616,1.29e-16,46;UBERON:0003528,2.41e-15,29;UBERON:0002791,2.41e-15,29;UBERON:0001893,2.41e-15,29;UBERON:0003080,3.71e-14,40;UBERON:0010314,4.87e-14,92;UBERON:0002780,2.42e-13,39;UBERON:0001890,2.42e-13,39;UBERON:0006240,2.42e-13,39;UBERON:0002021,3.32e-13,10;UBERON:0000411,3.32e-13,10;UBERON:0001950,3.32e-13,10;UBERON:0002619,1.32e-10,17;UBERON:0000956,2.45e-09,21;UBERON:0001869,2.45e-09,21;UBERON:0000203,2.45e-09,21;UBERON:0003076,1.41e-08,12;UBERON:0003057,1.41e-08,12;UBERON:0000970,5.20e-08,9;UBERON:0000019,5.20e-08,9;UBERON:0000047,5.20e-08,9;UBERON:0010312,5.20e-08,9;UBERON:0004088,5.20e-08,9;UBERON:0002104,5.20e-08,9;UBERON:0001456,5.20e-08,9;UBERON:0003072,5.20e-08,9;UBERON:0004128,5.20e-08,9;UBERON:0003071,5.20e-08,9;UBERON:0002420,1.13e-07,8;UBERON:0007245,1.13e-07,8;UBERON:0010009,1.13e-07,8;UBERON:0010011,1.13e-07,8;UBERON:0000454,1.13e-07,8;UBERON:0002240,9.55e-07,6;UBERON:0005174,9.55e-07,6;UBERON:0001137,9.55e-07,6|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.5629220976458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.61853168687678,3.1739458756322,1.90149421051854,0,0,0,0,0,0.299600110518405,0,0.311068836925433,0.675029691658453,0.841299845405528,9.71213346972932,10.3808214247258,1.10241719293459,0.862609239164127,0,16.5173821499083,31.9218345212969,24.4234387877427,1.45074916503213,2.28719109006024,2.08365348222704,19.821992929098,8.4414391504752,23.8365266531824,8.54422897873636,14.3795397607094,3.91438836233131,0.151452386666368,2.56943304363071,0,0,0,0,0,0,0.983110940922263,0,0,0,0.985903938436763,0,0,0,0,0,0,2.62622923353838,0,0,0.173485326766136,0,0.461230994512117,0,0,0,0,0,0,0.323533699894818,0.220841518460394,0,0,46.552146724836,44.8215952580794,0.510914110417183,0,0,0,18.1246673679835,37.5150494311274,2.51308704225729,165.306928502855,139.36492424503,34.9083914860061,52.4039279708857,0.203678727700633,0.124406970610093,2.52722758433675,11.1534183619831,1.69156575851515,1.14951052216736,1.80062129805349,2.71268672104287,4.21826294738233,5.12454881139399,4.68508622798644,24.5768202202065,0,0.189106080167819,0.527853372491847,0,0.834141747676794,1.74126083261083,1.4404749548556,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,105.775844127756,4.42489833230923,0,0.264450566663544,0.213288250535234,0,0.128867461322093,0,0,0.190225626112559,0,0,0,0.596869416123452,0.19496408711912,0,0.432276099749388,0.398282546508734,0.189667900953082,0.228497025219458,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0,0,0,0,0.163863314715738,0,0.144649058581512,0,0,0,0,39.334894547009,33.9913891117389,0,0,0.631016438832513,0.390438744296638,0.215423397732799,0.238968797952552,0.445597348164788,0.283076530788832,0.404810701674894,1.46127928955656,0,28.5975971615408,1.2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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:64176 | |||
|HGNC= | |||
|MCL_coexpression_id=2 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q8BG39 | |||
|association_with_transcript=47bp_to_ENSMUST00000085164,NM_001109753,uc009hwk.2,uc009hwm.2_5end | |||
|cluster_id=chr7:82453165..82453224,- | |||
|description=CAGE_peak_1_at_Sv2b_5end | |||
|id=chr7:82453165..82453224,- | |||
|ontology_enrichment_celltype=CL:0000117!5.49e-10!23;CL:0000337!5.49e-10!23;CL:0000540!1.55e-09!33;CL:0000047!1.55e-09!33;CL:0000031!1.55e-09!33;CL:0000404!1.55e-09!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,8.41e-11,23;CL:0000337,8.41e-11,23;CL:0000540,9.72e-07,33;CL:0000047,9.72e-07,33;CL:0000031,9.72e-07,33;CL:0000404,9.72e-07,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!1.89e-20!102;UBERON:0000924!1.89e-20!102;UBERON:0006601!1.89e-20!102;UBERON:0000073!3.37e-20!75;UBERON:0001016!3.37e-20!75;UBERON:0000033!4.23e-20!63;UBERON:0001017!9.23e-20!73;UBERON:0005743!9.23e-20!73;UBERON:0002346!2.99e-19!71;UBERON:0003075!2.99e-19!71;UBERON:0007284!2.99e-19!71;UBERON:0001049!1.18e-17!52;UBERON:0005068!1.18e-17!52;UBERON:0006241!1.18e-17!52;UBERON:0007135!1.18e-17!52;UBERON:0003056!1.62e-17!49;UBERON:0000955!1.30e-16!50;UBERON:0006238!1.30e-16!50;UBERON:0002616!5.78e-16!49;UBERON:0002020!1.61e-15!34;UBERON:0003080!6.69e-13!40;UBERON:0002791!1.35e-12!29;UBERON:0003528!1.35e-12!29;UBERON:0001893!1.35e-12!29;UBERON:0002780!2.61e-12!39;UBERON:0001890!2.61e-12!39;UBERON:0006240!2.61e-12!39;UBERON:0007811!3.71e-11!86;UBERON:0000153!4.07e-11!94;UBERON:0002021!3.25e-09!10;UBERON:0000411!3.25e-09!10;UBERON:0001950!3.25e-09!10;UBERON:0000956!1.89e-08!21;UBERON:0001869!1.89e-08!21;UBERON:0000203!1.89e-08!21;UBERON:0002619!1.74e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,8.76e-27,64;UBERON:0003075,8.76e-27,64;UBERON:0007284,8.76e-27,64;UBERON:0000073,1.50e-23,54;UBERON:0004121,1.99e-22,95;UBERON:0000924,1.99e-22,95;UBERON:0006601,1.99e-22,95;UBERON:0001049,1.06e-21,52;UBERON:0005068,1.06e-21,52;UBERON:0006241,1.06e-21,52;UBERON:0007135,1.06e-21,52;UBERON:0010371,1.45e-21,73;UBERON:0001016,7.98e-21,75;UBERON:0003056,1.04e-20,49;UBERON:0001017,1.36e-20,73;UBERON:0002020,1.22e-19,34;UBERON:0000955,1.67e-17,47;UBERON:0006238,1.67e-17,47;UBERON:0002616,1.29e-16,46;UBERON:0003528,2.41e-15,29;UBERON:0002791,2.41e-15,29;UBERON:0001893,2.41e-15,29;UBERON:0003080,3.71e-14,40;UBERON:0010314,4.87e-14,92;UBERON:0002780,2.42e-13,39;UBERON:0001890,2.42e-13,39;UBERON:0006240,2.42e-13,39;UBERON:0002021,3.32e-13,10;UBERON:0000411,3.32e-13,10;UBERON:0001950,3.32e-13,10;UBERON:0002619,1.32e-10,17;UBERON:0000956,2.45e-09,21;UBERON:0001869,2.45e-09,21;UBERON:0000203,2.45e-09,21;UBERON:0003076,1.41e-08,12;UBERON:0003057,1.41e-08,12;UBERON:0000970,5.20e-08,9;UBERON:0000019,5.20e-08,9;UBERON:0000047,5.20e-08,9;UBERON:0010312,5.20e-08,9;UBERON:0004088,5.20e-08,9;UBERON:0002104,5.20e-08,9;UBERON:0001456,5.20e-08,9;UBERON:0003072,5.20e-08,9;UBERON:0004128,5.20e-08,9;UBERON:0003071,5.20e-08,9;UBERON:0002420,1.13e-07,8;UBERON:0007245,1.13e-07,8;UBERON:0010009,1.13e-07,8;UBERON:0010011,1.13e-07,8;UBERON:0000454,1.13e-07,8;UBERON:0002240,9.55e-07,6;UBERON:0005174,9.55e-07,6;UBERON:0001137,9.55e-07,6 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.5629220976458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.61853168687678,3.1739458756322,1.90149421051854,0,0,0,0,0,0.299600110518405,0,0.311068836925433,0.675029691658453,0.841299845405528,9.71213346972932,10.3808214247258,1.10241719293459,0.862609239164127,0,16.5173821499083,31.9218345212969,24.4234387877427,1.45074916503213,2.28719109006024,2.08365348222704,19.821992929098,8.4414391504752,23.8365266531824,8.54422897873636,14.3795397607094,3.91438836233131,0.151452386666368,2.56943304363071,0,0,0,0,0,0,0.983110940922263,0,0,0,0.985903938436763,0,0,0,0,0,0,2.62622923353838,0,0,0.173485326766136,0,0.461230994512117,0,0,0,0,0,0,0.323533699894818,0.220841518460394,0,0,46.552146724836,44.8215952580794,0.510914110417183,0,0,0,18.1246673679835,37.5150494311274,2.51308704225729,165.306928502855,139.36492424503,34.9083914860061,52.4039279708857,0.203678727700633,0.124406970610093,2.52722758433675,11.1534183619831,1.69156575851515,1.14951052216736,1.80062129805349,2.71268672104287,4.21826294738233,5.12454881139399,4.68508622798644,24.5768202202065,0,0.189106080167819,0.527853372491847,0,0.834141747676794,1.74126083261083,1.4404749548556,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,105.775844127756,4.42489833230923,0,0.264450566663544,0.213288250535234,0,0.128867461322093,0,0,0.190225626112559,0,0,0,0.596869416123452,0.19496408711912,0,0.432276099749388,0.398282546508734,0.189667900953082,0.228497025219458,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0,0,0,0,0.163863314715738,0,0.144649058581512,0,0,0,0,39.334894547009,33.9913891117389,0,0,0.631016438832513,0.390438744296638,0.215423397732799,0.238968797952552,0.445597348164788,0.283076530788832,0.404810701674894,1.46127928955656,0,28.5975971615408,1.27746076687442,0.178065603667255,0.488660878060728,1.48473110675282,0,0,0.604647113929502,0.188605079755898,0.295301892880773,0.307435147943927,0.516856586336442,0,0.356497378384721,0,0,0,6.80879211507576,0.540183282093931,0,0,0,0.356737635204141,0.164549020602121,0.913394847343798,0,0,0.882113592219848,0.16488625294148,0.968786560175433,0.241251699712623,0.954978752025092,0.328281799490123,0.291480836629851,32.8202784558602,0.170870880797853,0,0.185194527369712,0.188368457004691,0.136694227721025,0,0,0,0,0.954670618015114,0,1.62655573701479,0.432021363287205,0.418176592028937,0.218362563746178,0.674321731924103,0.0826534557253359,0.523511883968059,0.388844919875379,0,0,0,0,0,0,0,0,0,0,0,0.288030006257865,0,0,0.308132871494482,0.51968329191118,0,0,0.240390899039938,0.295379054349154,0,0.0762068066549998,0,0,0.0962118416403295,0,0,0,0,0,1.15913756419314,1.50145980360946,3.11357761254351,0.214368379079066,0,127.06916458884,145.462774736268,142.65098284641,156.214542750412,182.231950258991,166.942051323124,167.405580057488,153.109209096235,183.975818047587,128.922317626203,0.103787347584177,0.798049746802062,0.853668028770671,0.486213434136588,0.838452650511929,0.551530525350042,2.22246727801615,0.824140228955577,1.28367683836726,1.01078884705519,1.52087579934144,1.88626341386076,1.591905626988,1.47257850531199,1.09127391015665,1.42888107384922,1.50649623728312,1.73618298417335,1.23625770240992,1.76638704161277,0.685738504770831,0.887379030796687,1.66905332963125,1.30811774969096,1.41164070622996,1.01537529470012,1.28049581010941,1.8414879800649,1.62964936615034,1.12228454331548,0.593175090620871,0.985044823755635,0,1.54936841185966,1.15743966588685,1.49886346762768,2.57324769289949,1.50409737833809,3.63447830930802,0.882365676478062,0.927471342481686 | |||
|short_description=p1@Sv2b | |||
}} |
Revision as of 14:06, 5 August 2015
Short description: | p1@Sv2b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Sv2b_5end |
Coexpression cluster: | MCL_coexpression_mm9:2 |
Association with transcript: | 47bp_to_ENSMUST00000085164, NM_001109753, uc009hwk.2, uc009hwm.2_5end |
EntrezGene: | 64176 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 8.41e-11 | 23 |
neuroblast (sensu Vertebrata) | 8.41e-11 | 23 |
neuron | 9.72e-07 | 33 |
neuronal stem cell | 9.72e-07 | 33 |
neuroblast | 9.72e-07 | 33 |
electrically signaling cell | 9.72e-07 | 33 |