FFCP PHASE1:Mm9::chr2:90725660..90725680,+: Difference between revisions
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{{FFCP|EntrezGene=67445|HGNC=|MCL_coexpression_id=189|UniProt=Q8R066|association_with_transcript=-262bp_to_ENSMUST00000036860,NM_026161,uc008ktq.1_5end|description=CAGE_peak_2_at_C1qtnf4_5end|id=chr2:90725660..90725680,+|ontology_enrichment_celltype=CL:0000117!2.37e-10!23;CL:0000337!2.37e-10!23|ontology_enrichment_celltype_v019_2=CL:0002610,1.60e-09,3;CL:0002614,5.60e-08,3;CL:0000117,1.86e-07,23;CL:0000337,1.86e-07,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!1.58e-30!71;UBERON:0003075!1.58e-30!71;UBERON:0007284!1.58e-30!71;UBERON:0000033!9.10e-29!63;UBERON:0001049!1.07e-25!52;UBERON:0005068!1.07e-25!52;UBERON:0006241!1.07e-25!52;UBERON:0007135!1.07e-25!52;UBERON:0004121!2.60e-25!102;UBERON:0000924!2.60e-25!102;UBERON:0006601!2.60e-25!102;UBERON:0000955!1.42e-24!50;UBERON:0006238!1.42e-24!50;UBERON:0002616!1.83e-23!49;UBERON:0001017!7.33e-23!73;UBERON:0005743!7.33e-23!73;UBERON:0000073!6.91e-22!75;UBERON:0001016!6.91e-22!75;UBERON:0002020!9.91e-21!34;UBERON:0003056!2.41e-20!49;UBERON:0007811!2.62e-18!86;UBERON:0002791!5.37e-16!29;UBERON:0003528!5.37e-16!29;UBERON:0001893!5.37e-16!29;UBERON:0000153!1.33e-15!94;UBERON:0003080!2.90e-15!40;UBERON:0002780!3.22e-14!39;UBERON:0001890!3.22e-14!39;UBERON:0006240!3.22e-14!39;UBERON:0002021!6.30e-13!10;UBERON:0000411!6.30e-13!10;UBERON:0001950!6.30e-13!10;UBERON:0003076!6.10e-12!12;UBERON:0003057!6.10e-12!12;UBERON:0000956!1.32e-10!21;UBERON:0001869!1.32e-10!21;UBERON:0000203!1.32e-10!21;UBERON:0002619!1.51e-10!17;UBERON:0002298!1.46e-08!6;UBERON:0002240!2.10e-07!6;UBERON:0005174!2.10e-07!6;UBERON:0001137!2.10e-07!6;UBERON:0000025!8.95e-07!114;UBERON:0002420!8.97e-07!8;UBERON:0007245!8.97e-07!8;UBERON:0010009!8.97e-07!8;UBERON:0010011!8.97e-07!8;UBERON:0000454!8.97e-07!8|ontology_enrichment_uberon_v019_2=UBERON:0000073,6.41e-35,54;UBERON:0001049,1.77e-30,52;UBERON:0005068,1.77e-30,52;UBERON:0006241,1.77e-30,52;UBERON:0007135,1.77e-30,52;UBERON:0001017,2.38e-28,73;UBERON:0001016,2.02e-27,75;UBERON:0000955,8.04e-27,47;UBERON:0006238,8.04e-27,47;UBERON:0002346,1.49e-25,64;UBERON:0003075,1.49e-25,64;UBERON:0007284,1.49e-25,64;UBERON:0002616,5.05e-25,46;UBERON:0002021,1.01e-23,10;UBERON:0000411,1.01e-23,10;UBERON:0001950,1.01e-23,10;UBERON:0002020,4.28e-22,34;UBERON:0004121,8.54e-22,95;UBERON:0000924,8.54e-22,95;UBERON:0006601,8.54e-22,95;UBERON:0010371,1.19e-21,73;UBERON:0003080,5.60e-19,40;UBERON:0003528,1.03e-18,29;UBERON:0002791,1.03e-18,29;UBERON:0001893,1.03e-18,29;UBERON:0002780,3.04e-17,39;UBERON:0001890,3.04e-17,39;UBERON:0006240,3.04e-17,39;UBERON:0003056,2.40e-16,49;UBERON:0010314,6.49e-16,92;UBERON:0002619,7.12e-16,17;UBERON:0000956,5.56e-15,21;UBERON:0001869,5.56e-15,21;UBERON:0000203,5.56e-15,21;UBERON:0003076,1.65e-12,12;UBERON:0003057,1.65e-12,12;UBERON:0000025,1.19e-10,114;UBERON:0002950,1.88e-10,4;UBERON:0001891,1.88e-10,4;UBERON:0009616,1.88e-10,4;UBERON:0010286,1.88e-10,4;UBERON:0004111,1.46e-09,122;UBERON:0004684,1.60e-09,3;UBERON:0002275,1.60e-09,3;UBERON:0002038,5.60e-08,3;UBERON:0009663,5.60e-08,3;UBERON:0009661,5.60e-08,3;UBERON:0000125,5.60e-08,3;UBERON:0002308,5.60e-08,3;UBERON:0004733,1.30e-07,6;UBERON:0004732,1.30e-07,6;UBERON:0002028,1.30e-07,6;UBERON:0007277,1.30e-07,6|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.04103896362567,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0,0,0,0,0,0,0,0,0,0,0.404632921719196,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0,2.28520787523043,2.87129103237098,0,0.191690942036473,0,33.0347642998166,39.2000127921526,40.0913051798795,0.395658863190582,0.457438218012048,0,8.37548997004143,3.37657566019008,3.36156145108982,0.589257170947335,1.70846016958924,0.745597783301202,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.79928715803342,0,0.148442139064825,0,0,0.922461989024234,0.452167921657868,0.117588707135705,0,0.247194967734374,0,0,0,0,0,0,15.517382241612,23.8769245767339,0,0,0,0,11.3840885947665,4.57500602818627,0.125654352112864,8.69121600961382,5.62574006126727,37.4018480207208,19.6311928311987,0.101839363850316,0,0,0.210441855886474,0,0.229902104433473,0.180062129805349,0.452114453507145,0.204109497453984,0.12811372028485,0.187403449119458,1.03481348295606,0,0,0,0,0,0,0,0,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0,0,3.15434922846191,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.4357883492065,8.67366480782304,0,0,0,0,0,0,0,0,0,0,0,6.42642632843614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.67531087237835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0,0,0,0,0,0.299033092087958,0.827292452285488,1.16670713006429,1.42075805825504,0.675824501963113,0.469428954583016,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,0,0,0,0,0,0,0,0,0,2.82375921308533,2.30162618253588,5.15605962095457,5.15559547031063,9.59115527678899,9.82012066606611,6.07520250208625,4.95353323546643,9.5159905886683,9.31968561153276,0,0,0,0.486213434136588,0,0,0,0,0,0,0,0,0.0936415074698824,0,0,0,0,0.192909220463705,0,0.294397840268795,0,0,0,0,0,0,0,0.263069711437843,0,0,0,0,0.409231043169689,0.154936841185966,0,0.249810577937946,0,0.214871054048298,0,0,0|short_description=p2@C1qtnf4}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:67445 | |||
|HGNC= | |||
|MCL_coexpression_id=189 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q8R066 | |||
|association_with_transcript=-262bp_to_ENSMUST00000036860,NM_026161,uc008ktq.1_5end | |||
|cluster_id=chr2:90725660..90725680,+ | |||
|description=CAGE_peak_2_at_C1qtnf4_5end | |||
|id=chr2:90725660..90725680,+ | |||
|ontology_enrichment_celltype=CL:0000117!2.37e-10!23;CL:0000337!2.37e-10!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0002610,1.60e-09,3;CL:0002614,5.60e-08,3;CL:0000117,1.86e-07,23;CL:0000337,1.86e-07,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!1.58e-30!71;UBERON:0003075!1.58e-30!71;UBERON:0007284!1.58e-30!71;UBERON:0000033!9.10e-29!63;UBERON:0001049!1.07e-25!52;UBERON:0005068!1.07e-25!52;UBERON:0006241!1.07e-25!52;UBERON:0007135!1.07e-25!52;UBERON:0004121!2.60e-25!102;UBERON:0000924!2.60e-25!102;UBERON:0006601!2.60e-25!102;UBERON:0000955!1.42e-24!50;UBERON:0006238!1.42e-24!50;UBERON:0002616!1.83e-23!49;UBERON:0001017!7.33e-23!73;UBERON:0005743!7.33e-23!73;UBERON:0000073!6.91e-22!75;UBERON:0001016!6.91e-22!75;UBERON:0002020!9.91e-21!34;UBERON:0003056!2.41e-20!49;UBERON:0007811!2.62e-18!86;UBERON:0002791!5.37e-16!29;UBERON:0003528!5.37e-16!29;UBERON:0001893!5.37e-16!29;UBERON:0000153!1.33e-15!94;UBERON:0003080!2.90e-15!40;UBERON:0002780!3.22e-14!39;UBERON:0001890!3.22e-14!39;UBERON:0006240!3.22e-14!39;UBERON:0002021!6.30e-13!10;UBERON:0000411!6.30e-13!10;UBERON:0001950!6.30e-13!10;UBERON:0003076!6.10e-12!12;UBERON:0003057!6.10e-12!12;UBERON:0000956!1.32e-10!21;UBERON:0001869!1.32e-10!21;UBERON:0000203!1.32e-10!21;UBERON:0002619!1.51e-10!17;UBERON:0002298!1.46e-08!6;UBERON:0002240!2.10e-07!6;UBERON:0005174!2.10e-07!6;UBERON:0001137!2.10e-07!6;UBERON:0000025!8.95e-07!114;UBERON:0002420!8.97e-07!8;UBERON:0007245!8.97e-07!8;UBERON:0010009!8.97e-07!8;UBERON:0010011!8.97e-07!8;UBERON:0000454!8.97e-07!8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,6.41e-35,54;UBERON:0001049,1.77e-30,52;UBERON:0005068,1.77e-30,52;UBERON:0006241,1.77e-30,52;UBERON:0007135,1.77e-30,52;UBERON:0001017,2.38e-28,73;UBERON:0001016,2.02e-27,75;UBERON:0000955,8.04e-27,47;UBERON:0006238,8.04e-27,47;UBERON:0002346,1.49e-25,64;UBERON:0003075,1.49e-25,64;UBERON:0007284,1.49e-25,64;UBERON:0002616,5.05e-25,46;UBERON:0002021,1.01e-23,10;UBERON:0000411,1.01e-23,10;UBERON:0001950,1.01e-23,10;UBERON:0002020,4.28e-22,34;UBERON:0004121,8.54e-22,95;UBERON:0000924,8.54e-22,95;UBERON:0006601,8.54e-22,95;UBERON:0010371,1.19e-21,73;UBERON:0003080,5.60e-19,40;UBERON:0003528,1.03e-18,29;UBERON:0002791,1.03e-18,29;UBERON:0001893,1.03e-18,29;UBERON:0002780,3.04e-17,39;UBERON:0001890,3.04e-17,39;UBERON:0006240,3.04e-17,39;UBERON:0003056,2.40e-16,49;UBERON:0010314,6.49e-16,92;UBERON:0002619,7.12e-16,17;UBERON:0000956,5.56e-15,21;UBERON:0001869,5.56e-15,21;UBERON:0000203,5.56e-15,21;UBERON:0003076,1.65e-12,12;UBERON:0003057,1.65e-12,12;UBERON:0000025,1.19e-10,114;UBERON:0002950,1.88e-10,4;UBERON:0001891,1.88e-10,4;UBERON:0009616,1.88e-10,4;UBERON:0010286,1.88e-10,4;UBERON:0004111,1.46e-09,122;UBERON:0004684,1.60e-09,3;UBERON:0002275,1.60e-09,3;UBERON:0002038,5.60e-08,3;UBERON:0009663,5.60e-08,3;UBERON:0009661,5.60e-08,3;UBERON:0000125,5.60e-08,3;UBERON:0002308,5.60e-08,3;UBERON:0004733,1.30e-07,6;UBERON:0004732,1.30e-07,6;UBERON:0002028,1.30e-07,6;UBERON:0007277,1.30e-07,6 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.04103896362567,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0,0,0,0,0,0,0,0,0,0,0.404632921719196,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0,2.28520787523043,2.87129103237098,0,0.191690942036473,0,33.0347642998166,39.2000127921526,40.0913051798795,0.395658863190582,0.457438218012048,0,8.37548997004143,3.37657566019008,3.36156145108982,0.589257170947335,1.70846016958924,0.745597783301202,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.79928715803342,0,0.148442139064825,0,0,0.922461989024234,0.452167921657868,0.117588707135705,0,0.247194967734374,0,0,0,0,0,0,15.517382241612,23.8769245767339,0,0,0,0,11.3840885947665,4.57500602818627,0.125654352112864,8.69121600961382,5.62574006126727,37.4018480207208,19.6311928311987,0.101839363850316,0,0,0.210441855886474,0,0.229902104433473,0.180062129805349,0.452114453507145,0.204109497453984,0.12811372028485,0.187403449119458,1.03481348295606,0,0,0,0,0,0,0,0,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0,0,3.15434922846191,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.4357883492065,8.67366480782304,0,0,0,0,0,0,0,0,0,0,0,6.42642632843614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.67531087237835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0,0,0,0,0,0.299033092087958,0.827292452285488,1.16670713006429,1.42075805825504,0.675824501963113,0.469428954583016,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,0,0,0,0,0,0,0,0,0,2.82375921308533,2.30162618253588,5.15605962095457,5.15559547031063,9.59115527678899,9.82012066606611,6.07520250208625,4.95353323546643,9.5159905886683,9.31968561153276,0,0,0,0.486213434136588,0,0,0,0,0,0,0,0,0.0936415074698824,0,0,0,0,0.192909220463705,0,0.294397840268795,0,0,0,0,0,0,0,0.263069711437843,0,0,0,0,0.409231043169689,0.154936841185966,0,0.249810577937946,0,0.214871054048298,0,0,0 | |||
|short_description=p2@C1qtnf4 | |||
}} |
Revision as of 14:58, 5 August 2015
Short description: | p2@C1qtnf4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_C1qtnf4_5end |
Coexpression cluster: | MCL_coexpression_mm9:189 |
Association with transcript: | -262bp_to_ENSMUST00000036860, NM_026161, uc008ktq.1_5end |
EntrezGene: | 67445 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
raphe nuclei neuron | 1.60e-09 | 3 |
neuron of the substantia nigra | 5.60e-08 | 3 |
CNS neuron (sensu Vertebrata) | 1.86e-07 | 23 |
neuroblast (sensu Vertebrata) | 1.86e-07 | 23 |