FFCP PHASE1:Mm9::chr5:118292122..118292176,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=18125|HGNC=|MCL_coexpression_id=3390|UniProt=Q9Z0J4|association_with_transcript=0bp_to_ENSMUST00000142742_5end|description=CAGE_peak_3_at_Nos1_5end|id=chr5:118292122..118292176,+|ontology_enrichment_celltype=CL:0000540!1.19e-21!33;CL:0000047!1.19e-21!33;CL:0000031!1.19e-21!33;CL:0000404!1.19e-21!33;CL:0002319!1.20e-16!43;CL:0000393!4.86e-16!39;CL:0000211!4.86e-16!39;CL:0000221!6.40e-16!44;CL:0000133!6.40e-16!44;CL:0000117!1.91e-15!23;CL:0000337!1.91e-15!23;CL:0000055!3.08e-12!50;CL:0000107!1.85e-08!9|ontology_enrichment_celltype_v019_2=CL:0000540,1.12e-27,33;CL:0000047,1.12e-27,33;CL:0000031,1.12e-27,33;CL:0000404,1.12e-27,33;CL:0000393,1.50e-22,39;CL:0000211,1.50e-22,39;CL:0002319,6.27e-20,43;CL:0000221,2.39e-19,44;CL:0000133,2.39e-19,44;CL:0000107,3.89e-19,9;CL:0000117,2.42e-13,23;CL:0000337,2.42e-13,23;CL:0002321,3.95e-10,70;CL:0002609,3.16e-09,6;CL:0002614,6.16e-08,3;CL:0002610,5.52e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!3.62e-34!73;UBERON:0005743!3.62e-34!73;UBERON:0000073!2.56e-33!75;UBERON:0001016!2.56e-33!75;UBERON:0001049!4.00e-23!52;UBERON:0005068!4.00e-23!52;UBERON:0006241!4.00e-23!52;UBERON:0007135!4.00e-23!52;UBERON:0000955!6.18e-23!50;UBERON:0006238!6.18e-23!50;UBERON:0002616!4.96e-22!49;UBERON:0004121!9.75e-22!102;UBERON:0000924!9.75e-22!102;UBERON:0006601!9.75e-22!102;UBERON:0002020!1.30e-19!34;UBERON:0003080!3.40e-18!40;UBERON:0002780!2.10e-17!39;UBERON:0001890!2.10e-17!39;UBERON:0006240!2.10e-17!39;UBERON:0002791!4.32e-17!29;UBERON:0003528!4.32e-17!29;UBERON:0001893!4.32e-17!29;UBERON:0000033!4.44e-17!63;UBERON:0002346!1.48e-16!71;UBERON:0003075!1.48e-16!71;UBERON:0007284!1.48e-16!71;UBERON:0003056!1.28e-13!49;UBERON:0000956!6.75e-12!21;UBERON:0001869!6.75e-12!21;UBERON:0000203!6.75e-12!21;UBERON:0007811!2.47e-10!86;UBERON:0002619!8.30e-09!17;UBERON:0000153!1.48e-08!94;UBERON:0002410!1.85e-08!9;UBERON:0000010!4.65e-07!11|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.36e-40,73;UBERON:0001016,6.63e-39,75;UBERON:0004121,6.85e-31,95;UBERON:0000924,6.85e-31,95;UBERON:0006601,6.85e-31,95;UBERON:0000073,8.73e-25,54;UBERON:0000955,3.98e-23,47;UBERON:0006238,3.98e-23,47;UBERON:0001049,9.37e-22,52;UBERON:0005068,9.37e-22,52;UBERON:0006241,9.37e-22,52;UBERON:0007135,9.37e-22,52;UBERON:0002346,1.29e-21,64;UBERON:0003075,1.29e-21,64;UBERON:0007284,1.29e-21,64;UBERON:0002616,1.97e-21,46;UBERON:0002410,3.89e-19,9;UBERON:0010371,4.36e-18,73;UBERON:0003528,2.29e-17,29;UBERON:0002791,2.29e-17,29;UBERON:0001893,2.29e-17,29;UBERON:0003080,1.51e-16,40;UBERON:0002020,5.52e-16,34;UBERON:0000010,2.57e-15,11;UBERON:0002780,3.98e-15,39;UBERON:0001890,3.98e-15,39;UBERON:0006240,3.98e-15,39;UBERON:0010314,6.42e-13,92;UBERON:0003056,1.30e-12,49;UBERON:0000956,7.66e-12,21;UBERON:0001869,7.66e-12,21;UBERON:0000203,7.66e-12,21;UBERON:0011216,1.06e-10,194;UBERON:0002950,6.63e-10,4;UBERON:0001891,6.63e-10,4;UBERON:0009616,6.63e-10,4;UBERON:0010286,6.63e-10,4;UBERON:0002038,6.16e-08,3;UBERON:0009663,6.16e-08,3;UBERON:0009661,6.16e-08,3;UBERON:0000125,6.16e-08,3;UBERON:0002308,6.16e-08,3;UBERON:0000013,1.14e-07,3;UBERON:0000011,2.19e-07,3;UBERON:0010313,2.94e-07,3;UBERON:0002342,2.94e-07,3;UBERON:0002005,2.94e-07,3;UBERON:0005428,2.94e-07,3;UBERON:0005062,2.94e-07,3;UBERON:0004684,5.52e-07,3;UBERON:0002275,5.52e-07,3;UBERON:0002420,8.02e-07,8;UBERON:0007245,8.02e-07,8;UBERON:0010009,8.02e-07,8;UBERON:0010011,8.02e-07,8;UBERON:0000454,8.02e-07,8|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0.274228867211478,0.42438965179803,0.680346321208558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0,0,0,0,0,0,0,0,0,0.606949382578793,2.11596391708813,0.633831403506179,0,0,0,0,0,0.299600110518405,0.384218305321555,9.95420278161385,11.340498819862,10.3059231062177,1.71390590642282,0.883474163806454,3.42974237801871,2.39613677545591,0.919218786610021,5.50579404996943,4.46905683298157,5.37622866396852,0.659431438650969,0.640413505216868,0.52091337055676,8.37548997004143,10.6924895906019,10.3902808488231,0.294628585473668,0.711858403995515,0.931997229126503,0,0.0755715601067855,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0.517875767294343,0,0,0,0,0,0,0,0.247194967734374,0.144599356919912,0,0,0,0,0,18.1524094147159,15.2896095973822,0,0,0,0,7.33974133083631,5.49000723382352,1.38219787324151,3.65031072403781,2.81287003063364,2.70124457927428,3.24482526135515,0,0,0,0.210441855886474,0,0,0,0,0,0,0,0.258703370739016,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.268412837520744,13.0379768109759,2.05809224758569,0,0.528901133327089,0,0,0.128867461322093,0.201683524623343,0.22237804384487,0,0,0,0.502670417600539,0.397912944082302,0.38992817423824,0,0,0.398282546508734,0,0,0,0.203651327845314,0.387904974335251,0.0701358198903186,0.379419222745544,0.147610147979602,0,0.246794327843601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.33486592967038,4.21962071731931,0,0,7.2566890465739,6.63745865304285,5.38558494331997,6.69112634267146,7.5751549188014,6.22768367735431,6.47697122679831,7.59865230569411,11.0680577825027,14.4594592389813,0,0,0,0.164970122972535,0,0,0,0,0,0.307435147943927,0,0,0,0.316036757935816,0,0,0,0,0.129358683782755,0.428674070063185,0.177340233642274,0.178368817602071,0.329098041204242,0.304464949114599,0,0,0.441056796109924,0,0.161464426695906,0.0603129249281559,0,0,0.291480836629851,2.59595422814714,0.512612642393558,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0.627264888043406,0.655087691238533,0.539457385539283,0.247960367176008,0.26175594198403,0.388844919875379,8.07741107013003,0,0,0,0,0,0,0,0,0.104859344425711,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0.15241361331,0.100826185136841,0.0974578807397524,0.0962118416403295,0.233753804363138,0,0,0,0,0.386379188064381,0,0,0.857473516316263,0,0.564751842617067,0.460325236507177,0.572895513439397,0.859265911718438,0.685082519770642,3.0215755895588,0.675022500231806,3.15224842256954,1.35942722695261,1.03552062350364,0,0,0.170733605754134,0.486213434136588,0.209613162627982,0.367687016900028,0.222246727801615,0.412070114477788,0,0.758091635291392,0,0.565879024158229,0.561849044819294,0.512201219238954,0.402048282689293,0.476293691283074,0.927074607558844,0.192909220463705,0,0,0.685738504770831,0.354951612318675,0.715308569841963,0.145346416632329,0.376437521661322,0.169229215783353,0.548783918618318,1.05227884575137,0.271608227691724,0,0.355905054372522,0.591026894253381,0.409231043169689,0.464810523557898,0.578719832943424,0.999242311751784,0.701794825336225,0.214871054048298,0,0,0|short_description=p3@Nos1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:18125 | |||
|HGNC= | |||
|MCL_coexpression_id=3390 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q9Z0J4 | |||
|association_with_transcript=0bp_to_ENSMUST00000142742_5end | |||
|cluster_id=chr5:118292122..118292176,+ | |||
|description=CAGE_peak_3_at_Nos1_5end | |||
|id=chr5:118292122..118292176,+ | |||
|ontology_enrichment_celltype=CL:0000540!1.19e-21!33;CL:0000047!1.19e-21!33;CL:0000031!1.19e-21!33;CL:0000404!1.19e-21!33;CL:0002319!1.20e-16!43;CL:0000393!4.86e-16!39;CL:0000211!4.86e-16!39;CL:0000221!6.40e-16!44;CL:0000133!6.40e-16!44;CL:0000117!1.91e-15!23;CL:0000337!1.91e-15!23;CL:0000055!3.08e-12!50;CL:0000107!1.85e-08!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,1.12e-27,33;CL:0000047,1.12e-27,33;CL:0000031,1.12e-27,33;CL:0000404,1.12e-27,33;CL:0000393,1.50e-22,39;CL:0000211,1.50e-22,39;CL:0002319,6.27e-20,43;CL:0000221,2.39e-19,44;CL:0000133,2.39e-19,44;CL:0000107,3.89e-19,9;CL:0000117,2.42e-13,23;CL:0000337,2.42e-13,23;CL:0002321,3.95e-10,70;CL:0002609,3.16e-09,6;CL:0002614,6.16e-08,3;CL:0002610,5.52e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!3.62e-34!73;UBERON:0005743!3.62e-34!73;UBERON:0000073!2.56e-33!75;UBERON:0001016!2.56e-33!75;UBERON:0001049!4.00e-23!52;UBERON:0005068!4.00e-23!52;UBERON:0006241!4.00e-23!52;UBERON:0007135!4.00e-23!52;UBERON:0000955!6.18e-23!50;UBERON:0006238!6.18e-23!50;UBERON:0002616!4.96e-22!49;UBERON:0004121!9.75e-22!102;UBERON:0000924!9.75e-22!102;UBERON:0006601!9.75e-22!102;UBERON:0002020!1.30e-19!34;UBERON:0003080!3.40e-18!40;UBERON:0002780!2.10e-17!39;UBERON:0001890!2.10e-17!39;UBERON:0006240!2.10e-17!39;UBERON:0002791!4.32e-17!29;UBERON:0003528!4.32e-17!29;UBERON:0001893!4.32e-17!29;UBERON:0000033!4.44e-17!63;UBERON:0002346!1.48e-16!71;UBERON:0003075!1.48e-16!71;UBERON:0007284!1.48e-16!71;UBERON:0003056!1.28e-13!49;UBERON:0000956!6.75e-12!21;UBERON:0001869!6.75e-12!21;UBERON:0000203!6.75e-12!21;UBERON:0007811!2.47e-10!86;UBERON:0002619!8.30e-09!17;UBERON:0000153!1.48e-08!94;UBERON:0002410!1.85e-08!9;UBERON:0000010!4.65e-07!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.36e-40,73;UBERON:0001016,6.63e-39,75;UBERON:0004121,6.85e-31,95;UBERON:0000924,6.85e-31,95;UBERON:0006601,6.85e-31,95;UBERON:0000073,8.73e-25,54;UBERON:0000955,3.98e-23,47;UBERON:0006238,3.98e-23,47;UBERON:0001049,9.37e-22,52;UBERON:0005068,9.37e-22,52;UBERON:0006241,9.37e-22,52;UBERON:0007135,9.37e-22,52;UBERON:0002346,1.29e-21,64;UBERON:0003075,1.29e-21,64;UBERON:0007284,1.29e-21,64;UBERON:0002616,1.97e-21,46;UBERON:0002410,3.89e-19,9;UBERON:0010371,4.36e-18,73;UBERON:0003528,2.29e-17,29;UBERON:0002791,2.29e-17,29;UBERON:0001893,2.29e-17,29;UBERON:0003080,1.51e-16,40;UBERON:0002020,5.52e-16,34;UBERON:0000010,2.57e-15,11;UBERON:0002780,3.98e-15,39;UBERON:0001890,3.98e-15,39;UBERON:0006240,3.98e-15,39;UBERON:0010314,6.42e-13,92;UBERON:0003056,1.30e-12,49;UBERON:0000956,7.66e-12,21;UBERON:0001869,7.66e-12,21;UBERON:0000203,7.66e-12,21;UBERON:0011216,1.06e-10,194;UBERON:0002950,6.63e-10,4;UBERON:0001891,6.63e-10,4;UBERON:0009616,6.63e-10,4;UBERON:0010286,6.63e-10,4;UBERON:0002038,6.16e-08,3;UBERON:0009663,6.16e-08,3;UBERON:0009661,6.16e-08,3;UBERON:0000125,6.16e-08,3;UBERON:0002308,6.16e-08,3;UBERON:0000013,1.14e-07,3;UBERON:0000011,2.19e-07,3;UBERON:0010313,2.94e-07,3;UBERON:0002342,2.94e-07,3;UBERON:0002005,2.94e-07,3;UBERON:0005428,2.94e-07,3;UBERON:0005062,2.94e-07,3;UBERON:0004684,5.52e-07,3;UBERON:0002275,5.52e-07,3;UBERON:0002420,8.02e-07,8;UBERON:0007245,8.02e-07,8;UBERON:0010009,8.02e-07,8;UBERON:0010011,8.02e-07,8;UBERON:0000454,8.02e-07,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0.274228867211478,0.42438965179803,0.680346321208558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0,0,0,0,0,0,0,0,0,0.606949382578793,2.11596391708813,0.633831403506179,0,0,0,0,0,0.299600110518405,0.384218305321555,9.95420278161385,11.340498819862,10.3059231062177,1.71390590642282,0.883474163806454,3.42974237801871,2.39613677545591,0.919218786610021,5.50579404996943,4.46905683298157,5.37622866396852,0.659431438650969,0.640413505216868,0.52091337055676,8.37548997004143,10.6924895906019,10.3902808488231,0.294628585473668,0.711858403995515,0.931997229126503,0,0.0755715601067855,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0.517875767294343,0,0,0,0,0,0,0,0.247194967734374,0.144599356919912,0,0,0,0,0,18.1524094147159,15.2896095973822,0,0,0,0,7.33974133083631,5.49000723382352,1.38219787324151,3.65031072403781,2.81287003063364,2.70124457927428,3.24482526135515,0,0,0,0.210441855886474,0,0,0,0,0,0,0,0.258703370739016,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.268412837520744,13.0379768109759,2.05809224758569,0,0.528901133327089,0,0,0.128867461322093,0.201683524623343,0.22237804384487,0,0,0,0.502670417600539,0.397912944082302,0.38992817423824,0,0,0.398282546508734,0,0,0,0.203651327845314,0.387904974335251,0.0701358198903186,0.379419222745544,0.147610147979602,0,0.246794327843601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.33486592967038,4.21962071731931,0,0,7.2566890465739,6.63745865304285,5.38558494331997,6.69112634267146,7.5751549188014,6.22768367735431,6.47697122679831,7.59865230569411,11.0680577825027,14.4594592389813,0,0,0,0.164970122972535,0,0,0,0,0,0.307435147943927,0,0,0,0.316036757935816,0,0,0,0,0.129358683782755,0.428674070063185,0.177340233642274,0.178368817602071,0.329098041204242,0.304464949114599,0,0,0.441056796109924,0,0.161464426695906,0.0603129249281559,0,0,0.291480836629851,2.59595422814714,0.512612642393558,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0.627264888043406,0.655087691238533,0.539457385539283,0.247960367176008,0.26175594198403,0.388844919875379,8.07741107013003,0,0,0,0,0,0,0,0,0.104859344425711,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0.15241361331,0.100826185136841,0.0974578807397524,0.0962118416403295,0.233753804363138,0,0,0,0,0.386379188064381,0,0,0.857473516316263,0,0.564751842617067,0.460325236507177,0.572895513439397,0.859265911718438,0.685082519770642,3.0215755895588,0.675022500231806,3.15224842256954,1.35942722695261,1.03552062350364,0,0,0.170733605754134,0.486213434136588,0.209613162627982,0.367687016900028,0.222246727801615,0.412070114477788,0,0.758091635291392,0,0.565879024158229,0.561849044819294,0.512201219238954,0.402048282689293,0.476293691283074,0.927074607558844,0.192909220463705,0,0,0.685738504770831,0.354951612318675,0.715308569841963,0.145346416632329,0.376437521661322,0.169229215783353,0.548783918618318,1.05227884575137,0.271608227691724,0,0.355905054372522,0.591026894253381,0.409231043169689,0.464810523557898,0.578719832943424,0.999242311751784,0.701794825336225,0.214871054048298,0,0,0 | |||
|short_description=p3@Nos1 | |||
}} |
Revision as of 03:48, 6 August 2015
Short description: | p3@Nos1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Nos1_5end |
Coexpression cluster: | MCL_coexpression_mm9:3390 |
Association with transcript: | 0bp_to_ENSMUST00000142742_5end |
EntrezGene: | 18125 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 1.12e-27 | 33 |
neuronal stem cell | 1.12e-27 | 33 |
neuroblast | 1.12e-27 | 33 |
electrically signaling cell | 1.12e-27 | 33 |
electrically responsive cell | 1.50e-22 | 39 |
electrically active cell | 1.50e-22 | 39 |
neural cell | 6.27e-20 | 43 |
ectodermal cell | 2.39e-19 | 44 |
neurectodermal cell | 2.39e-19 | 44 |
autonomic neuron | 3.89e-19 | 9 |
CNS neuron (sensu Vertebrata) | 2.42e-13 | 23 |
neuroblast (sensu Vertebrata) | 2.42e-13 | 23 |
embryonic cell | 3.95e-10 | 70 |
neuron of cerebral cortex | 3.16e-09 | 6 |
neuron of the substantia nigra | 6.16e-08 | 3 |
raphe nuclei neuron | 5.52e-07 | 3 |