FFCP PHASE1:Mm9::chr3:146433096..146433110,-: Difference between revisions
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{{FFCP|EntrezGene=18749|HGNC=|MCL_coexpression_id=2|UniProt=P68181,P05132|association_with_transcript=91bp_to_NM_001164198,uc008rrs.2_5end|description=CAGE_peak_15_at_Prkacb_5end|id=chr3:146433096..146433110,-|ontology_enrichment_celltype=CL:0000117!2.19e-13!23;CL:0000337!2.19e-13!23;CL:0000540!1.73e-08!33;CL:0000047!1.73e-08!33;CL:0000031!1.73e-08!33;CL:0000404!1.73e-08!33|ontology_enrichment_celltype_v019_2=CL:0000117,1.32e-10,23;CL:0000337,1.32e-10,23;CL:0002614,2.88e-08,3;CL:0002610,4.31e-08,3;CL:0000540,8.84e-07,33;CL:0000047,8.84e-07,33;CL:0000031,8.84e-07,33;CL:0000404,8.84e-07,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!2.77e-32!52;UBERON:0005068!2.77e-32!52;UBERON:0006241!2.77e-32!52;UBERON:0007135!2.77e-32!52;UBERON:0000955!1.48e-30!50;UBERON:0006238!1.48e-30!50;UBERON:0002616!1.91e-29!49;UBERON:0000033!8.69e-28!63;UBERON:0001017!3.41e-27!73;UBERON:0005743!3.41e-27!73;UBERON:0000073!3.94e-27!75;UBERON:0001016!3.94e-27!75;UBERON:0002346!4.33e-27!71;UBERON:0003075!4.33e-27!71;UBERON:0007284!4.33e-27!71;UBERON:0002020!3.06e-26!34;UBERON:0003080!4.79e-24!40;UBERON:0002780!6.22e-23!39;UBERON:0001890!6.22e-23!39;UBERON:0006240!6.22e-23!39;UBERON:0003056!9.14e-23!49;UBERON:0002791!1.83e-21!29;UBERON:0003528!1.83e-21!29;UBERON:0001893!1.83e-21!29;UBERON:0004121!2.14e-21!102;UBERON:0000924!2.14e-21!102;UBERON:0006601!2.14e-21!102;UBERON:0007811!3.09e-17!86;UBERON:0000153!1.53e-14!94;UBERON:0000956!7.10e-14!21;UBERON:0001869!7.10e-14!21;UBERON:0000203!7.10e-14!21;UBERON:0002021!1.19e-13!10;UBERON:0000411!1.19e-13!10;UBERON:0001950!1.19e-13!10;UBERON:0002619!1.12e-12!17;UBERON:0002420!6.06e-09!8;UBERON:0007245!6.06e-09!8;UBERON:0010009!6.06e-09!8;UBERON:0010011!6.06e-09!8;UBERON:0000454!6.06e-09!8;UBERON:0003076!1.72e-08!12;UBERON:0003057!1.72e-08!12;UBERON:0000025!5.03e-08!114;UBERON:0002298!1.05e-07!6;UBERON:0004111!3.30e-07!122;UBERON:0002240!4.88e-07!6;UBERON:0005174!4.88e-07!6;UBERON:0001137!4.88e-07!6|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.59e-41,54;UBERON:0001049,2.98e-37,52;UBERON:0005068,2.98e-37,52;UBERON:0006241,2.98e-37,52;UBERON:0007135,2.98e-37,52;UBERON:0001017,1.35e-35,73;UBERON:0001016,1.78e-34,75;UBERON:0000955,8.04e-31,47;UBERON:0006238,8.04e-31,47;UBERON:0002020,1.87e-30,34;UBERON:0002346,3.92e-29,64;UBERON:0003075,3.92e-29,64;UBERON:0007284,3.92e-29,64;UBERON:0002616,6.43e-29,46;UBERON:0002021,9.12e-28,10;UBERON:0000411,9.12e-28,10;UBERON:0001950,9.12e-28,10;UBERON:0004121,7.13e-26,95;UBERON:0000924,7.13e-26,95;UBERON:0006601,7.13e-26,95;UBERON:0003080,7.50e-26,40;UBERON:0010371,8.62e-25,73;UBERON:0003528,3.62e-24,29;UBERON:0002791,3.62e-24,29;UBERON:0001893,3.62e-24,29;UBERON:0002780,6.34e-24,39;UBERON:0001890,6.34e-24,39;UBERON:0006240,6.34e-24,39;UBERON:0003056,3.35e-20,49;UBERON:0002619,1.61e-18,17;UBERON:0010314,2.09e-18,92;UBERON:0000956,2.05e-17,21;UBERON:0001869,2.05e-17,21;UBERON:0000203,2.05e-17,21;UBERON:0000025,1.16e-13,114;UBERON:0004111,2.32e-12,122;UBERON:0003076,1.58e-11,12;UBERON:0003057,1.58e-11,12;UBERON:0002950,1.18e-10,4;UBERON:0001891,1.18e-10,4;UBERON:0009616,1.18e-10,4;UBERON:0010286,1.18e-10,4;UBERON:0002240,1.07e-09,6;UBERON:0005174,1.07e-09,6;UBERON:0001137,1.07e-09,6;UBERON:0011216,2.72e-09,194;UBERON:0002038,2.88e-08,3;UBERON:0009663,2.88e-08,3;UBERON:0009661,2.88e-08,3;UBERON:0000125,2.88e-08,3;UBERON:0002308,2.88e-08,3;UBERON:0004684,4.31e-08,3;UBERON:0002275,4.31e-08,3;UBERON:0002420,7.65e-08,8;UBERON:0007245,7.65e-08,8;UBERON:0010009,7.65e-08,8;UBERON:0010011,7.65e-08,8;UBERON:0000454,7.65e-08,8;UBERON:0001948,1.58e-07,5;UBERON:0002315,1.58e-07,5;UBERON:0000483,8.31e-07,174|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.935476191661768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01158230429799,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0.210324961351382,1.14260393761521,1.76694832761291,0.122490799214954,0.575072826109418,0,2.20231761998777,3.44755812830007,2.76491759861238,0.923204014111357,0.274462930807229,0.52091337055676,2.51264699101243,4.50210088025344,3.0559649555362,1.17851434189467,1.13897344639282,0.745597783301202,0.075726193333184,0,0,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0.593768556259299,0,0,0,0.150722640552623,0,0,0,0,0,0,0,0.484875253135222,0,0.878342391034642,1.46612694769419,0,0,0,0,7.18995069143149,7.32000964509802,2.38743269014442,11.1247564923057,10.2286182932132,5.61027720310812,4.05603157669394,0,0,0,0,0,0,0,0.150704817835715,0,0.2562274405697,0.0937017245597288,0.776110112217047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232533944750408,0,0,0,0,0,0,0,0,2.73376933133365,0.308713837137853,0,0,0,0,0,0,0.22237804384487,0,0,0.164698954724011,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.40825884981688,2.69586879162067,0,0,0,0,0,0,0,0,0,0,0,3.21321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.70219802876894,0,0,0,0,0.356737635204141,0.164549020602121,0.304464949114599,0,0,0,0,0,0,0,0,0,4.45020724825223,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218362563746178,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,11.8597886949584,11.5081309126794,12.6037012956667,8.59265911718438,10.9613203163303,11.3309084608455,12.8254275044043,12.6089936902782,20.8445508132734,15.0150490408028,0,0,0,0.243106717068294,0.209613162627982,0.183843508450014,0,0.206035057238894,0.64183841918363,0,0.25347929989024,0.188626341386076,0.187283014939765,0.448176066834085,0.114870937911227,0,0.115884325944855,0,0,0.294397840268795,0.342869252385415,0.177475806159338,0,0.436039249896986,0.376437521661322,0.0846146078916765,0.182927972872773,0,0.135804113845862,0,0,0.0985044823755635,0,0.464810523557898,0,0.249810577937946,0,0,0,0,0|short_description=p15@Prkacb}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:18749 | |||
|HGNC= | |||
|MCL_coexpression_id=2 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:P68181,uniprot:P05132 | |||
|association_with_transcript=91bp_to_NM_001164198,uc008rrs.2_5end | |||
|cluster_id=chr3:146433096..146433110,- | |||
|description=CAGE_peak_15_at_Prkacb_5end | |||
|id=chr3:146433096..146433110,- | |||
|ontology_enrichment_celltype=CL:0000117!2.19e-13!23;CL:0000337!2.19e-13!23;CL:0000540!1.73e-08!33;CL:0000047!1.73e-08!33;CL:0000031!1.73e-08!33;CL:0000404!1.73e-08!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.32e-10,23;CL:0000337,1.32e-10,23;CL:0002614,2.88e-08,3;CL:0002610,4.31e-08,3;CL:0000540,8.84e-07,33;CL:0000047,8.84e-07,33;CL:0000031,8.84e-07,33;CL:0000404,8.84e-07,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.77e-32!52;UBERON:0005068!2.77e-32!52;UBERON:0006241!2.77e-32!52;UBERON:0007135!2.77e-32!52;UBERON:0000955!1.48e-30!50;UBERON:0006238!1.48e-30!50;UBERON:0002616!1.91e-29!49;UBERON:0000033!8.69e-28!63;UBERON:0001017!3.41e-27!73;UBERON:0005743!3.41e-27!73;UBERON:0000073!3.94e-27!75;UBERON:0001016!3.94e-27!75;UBERON:0002346!4.33e-27!71;UBERON:0003075!4.33e-27!71;UBERON:0007284!4.33e-27!71;UBERON:0002020!3.06e-26!34;UBERON:0003080!4.79e-24!40;UBERON:0002780!6.22e-23!39;UBERON:0001890!6.22e-23!39;UBERON:0006240!6.22e-23!39;UBERON:0003056!9.14e-23!49;UBERON:0002791!1.83e-21!29;UBERON:0003528!1.83e-21!29;UBERON:0001893!1.83e-21!29;UBERON:0004121!2.14e-21!102;UBERON:0000924!2.14e-21!102;UBERON:0006601!2.14e-21!102;UBERON:0007811!3.09e-17!86;UBERON:0000153!1.53e-14!94;UBERON:0000956!7.10e-14!21;UBERON:0001869!7.10e-14!21;UBERON:0000203!7.10e-14!21;UBERON:0002021!1.19e-13!10;UBERON:0000411!1.19e-13!10;UBERON:0001950!1.19e-13!10;UBERON:0002619!1.12e-12!17;UBERON:0002420!6.06e-09!8;UBERON:0007245!6.06e-09!8;UBERON:0010009!6.06e-09!8;UBERON:0010011!6.06e-09!8;UBERON:0000454!6.06e-09!8;UBERON:0003076!1.72e-08!12;UBERON:0003057!1.72e-08!12;UBERON:0000025!5.03e-08!114;UBERON:0002298!1.05e-07!6;UBERON:0004111!3.30e-07!122;UBERON:0002240!4.88e-07!6;UBERON:0005174!4.88e-07!6;UBERON:0001137!4.88e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.59e-41,54;UBERON:0001049,2.98e-37,52;UBERON:0005068,2.98e-37,52;UBERON:0006241,2.98e-37,52;UBERON:0007135,2.98e-37,52;UBERON:0001017,1.35e-35,73;UBERON:0001016,1.78e-34,75;UBERON:0000955,8.04e-31,47;UBERON:0006238,8.04e-31,47;UBERON:0002020,1.87e-30,34;UBERON:0002346,3.92e-29,64;UBERON:0003075,3.92e-29,64;UBERON:0007284,3.92e-29,64;UBERON:0002616,6.43e-29,46;UBERON:0002021,9.12e-28,10;UBERON:0000411,9.12e-28,10;UBERON:0001950,9.12e-28,10;UBERON:0004121,7.13e-26,95;UBERON:0000924,7.13e-26,95;UBERON:0006601,7.13e-26,95;UBERON:0003080,7.50e-26,40;UBERON:0010371,8.62e-25,73;UBERON:0003528,3.62e-24,29;UBERON:0002791,3.62e-24,29;UBERON:0001893,3.62e-24,29;UBERON:0002780,6.34e-24,39;UBERON:0001890,6.34e-24,39;UBERON:0006240,6.34e-24,39;UBERON:0003056,3.35e-20,49;UBERON:0002619,1.61e-18,17;UBERON:0010314,2.09e-18,92;UBERON:0000956,2.05e-17,21;UBERON:0001869,2.05e-17,21;UBERON:0000203,2.05e-17,21;UBERON:0000025,1.16e-13,114;UBERON:0004111,2.32e-12,122;UBERON:0003076,1.58e-11,12;UBERON:0003057,1.58e-11,12;UBERON:0002950,1.18e-10,4;UBERON:0001891,1.18e-10,4;UBERON:0009616,1.18e-10,4;UBERON:0010286,1.18e-10,4;UBERON:0002240,1.07e-09,6;UBERON:0005174,1.07e-09,6;UBERON:0001137,1.07e-09,6;UBERON:0011216,2.72e-09,194;UBERON:0002038,2.88e-08,3;UBERON:0009663,2.88e-08,3;UBERON:0009661,2.88e-08,3;UBERON:0000125,2.88e-08,3;UBERON:0002308,2.88e-08,3;UBERON:0004684,4.31e-08,3;UBERON:0002275,4.31e-08,3;UBERON:0002420,7.65e-08,8;UBERON:0007245,7.65e-08,8;UBERON:0010009,7.65e-08,8;UBERON:0010011,7.65e-08,8;UBERON:0000454,7.65e-08,8;UBERON:0001948,1.58e-07,5;UBERON:0002315,1.58e-07,5;UBERON:0000483,8.31e-07,174 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.935476191661768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01158230429799,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0.210324961351382,1.14260393761521,1.76694832761291,0.122490799214954,0.575072826109418,0,2.20231761998777,3.44755812830007,2.76491759861238,0.923204014111357,0.274462930807229,0.52091337055676,2.51264699101243,4.50210088025344,3.0559649555362,1.17851434189467,1.13897344639282,0.745597783301202,0.075726193333184,0,0,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0.593768556259299,0,0,0,0.150722640552623,0,0,0,0,0,0,0,0.484875253135222,0,0.878342391034642,1.46612694769419,0,0,0,0,7.18995069143149,7.32000964509802,2.38743269014442,11.1247564923057,10.2286182932132,5.61027720310812,4.05603157669394,0,0,0,0,0,0,0,0.150704817835715,0,0.2562274405697,0.0937017245597288,0.776110112217047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232533944750408,0,0,0,0,0,0,0,0,2.73376933133365,0.308713837137853,0,0,0,0,0,0,0.22237804384487,0,0,0.164698954724011,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.40825884981688,2.69586879162067,0,0,0,0,0,0,0,0,0,0,0,3.21321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.70219802876894,0,0,0,0,0.356737635204141,0.164549020602121,0.304464949114599,0,0,0,0,0,0,0,0,0,4.45020724825223,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218362563746178,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,11.8597886949584,11.5081309126794,12.6037012956667,8.59265911718438,10.9613203163303,11.3309084608455,12.8254275044043,12.6089936902782,20.8445508132734,15.0150490408028,0,0,0,0.243106717068294,0.209613162627982,0.183843508450014,0,0.206035057238894,0.64183841918363,0,0.25347929989024,0.188626341386076,0.187283014939765,0.448176066834085,0.114870937911227,0,0.115884325944855,0,0,0.294397840268795,0.342869252385415,0.177475806159338,0,0.436039249896986,0.376437521661322,0.0846146078916765,0.182927972872773,0,0.135804113845862,0,0,0.0985044823755635,0,0.464810523557898,0,0.249810577937946,0,0,0,0,0 | |||
|short_description=p15@Prkacb | |||
}} |
Revision as of 05:07, 6 August 2015
Short description: | p15@Prkacb |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_15_at_Prkacb_5end |
Coexpression cluster: | MCL_coexpression_mm9:2 |
Association with transcript: | 91bp_to_NM_001164198, uc008rrs.2_5end |
EntrezGene: | 18749 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.32e-10 | 23 |
neuroblast (sensu Vertebrata) | 1.32e-10 | 23 |
neuron of the substantia nigra | 2.88e-08 | 3 |
raphe nuclei neuron | 4.31e-08 | 3 |
neuron | 8.84e-07 | 33 |
neuronal stem cell | 8.84e-07 | 33 |
neuroblast | 8.84e-07 | 33 |
electrically signaling cell | 8.84e-07 | 33 |