FFCP PHASE1:Mm9::chr11:6315806..6315816,+: Difference between revisions
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{{FFCP|EntrezGene=268373|HGNC=|UniProt=|association_with_transcript=-54bp_to_ENSMUST00000135789_5end|description=CAGE_peak_4_at_Ppia_5end|id=chr11:6315806..6315816,+|ontology_enrichment_celltype=CL:0000117!1.66e-09!23;CL:0000337!1.66e-09!23;CL:0000055!1.27e-07!50;CL:0000393!2.65e-07!39;CL:0000211!2.65e-07!39;CL:0002319!2.85e-07!43;CL:0000221!7.07e-07!44;CL:0000133!7.07e-07!44|ontology_enrichment_celltype_v019_2=CL:0000117,3.77e-23,23;CL:0000337,3.77e-23,23;CL:0000393,4.94e-15,39;CL:0000211,4.94e-15,39;CL:0000540,1.01e-14,33;CL:0000047,1.01e-14,33;CL:0000031,1.01e-14,33;CL:0000404,1.01e-14,33;CL:0002319,6.48e-13,43;CL:0000221,1.65e-12,44;CL:0000133,1.65e-12,44;CL:0002321,1.05e-10,70;CL:0000723,5.79e-08,91;CL:0000048,5.79e-08,91;CL:0002614,2.57e-07,3;CL:0000034,4.26e-07,97|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002020!2.47e-16!34;UBERON:0001049!1.85e-15!52;UBERON:0005068!1.85e-15!52;UBERON:0006241!1.85e-15!52;UBERON:0007135!1.85e-15!52;UBERON:0000073!6.07e-15!75;UBERON:0001016!6.07e-15!75;UBERON:0001017!1.99e-14!73;UBERON:0005743!1.99e-14!73;UBERON:0002346!1.44e-13!71;UBERON:0003075!1.44e-13!71;UBERON:0007284!1.44e-13!71;UBERON:0002791!2.08e-13!29;UBERON:0003528!2.08e-13!29;UBERON:0001893!2.08e-13!29;UBERON:0000955!1.15e-12!50;UBERON:0006238!1.15e-12!50;UBERON:0002616!1.81e-12!49;UBERON:0003080!7.71e-12!40;UBERON:0002780!2.72e-11!39;UBERON:0001890!2.72e-11!39;UBERON:0006240!2.72e-11!39;UBERON:0004121!7.11e-11!102;UBERON:0000924!7.11e-11!102;UBERON:0006601!7.11e-11!102;UBERON:0000033!1.62e-09!63;UBERON:0003056!2.39e-09!49;UBERON:0000956!3.73e-09!21;UBERON:0001869!3.73e-09!21;UBERON:0000203!3.73e-09!21;UBERON:0002619!2.76e-08!17|ontology_enrichment_uberon_v019_2=UBERON:0002020,9.78e-29,34;UBERON:0000073,4.88e-26,54;UBERON:0001049,1.76e-23,52;UBERON:0005068,1.76e-23,52;UBERON:0006241,1.76e-23,52;UBERON:0007135,1.76e-23,52;UBERON:0001016,4.97e-21,75;UBERON:0003528,5.05e-21,29;UBERON:0002791,5.05e-21,29;UBERON:0001893,5.05e-21,29;UBERON:0001017,2.48e-20,73;UBERON:0003080,3.47e-19,40;UBERON:0002780,7.88e-18,39;UBERON:0001890,7.88e-18,39;UBERON:0006240,7.88e-18,39;UBERON:0002346,1.04e-17,64;UBERON:0003075,1.04e-17,64;UBERON:0007284,1.04e-17,64;UBERON:0002616,1.74e-17,46;UBERON:0000955,5.50e-17,47;UBERON:0006238,5.50e-17,47;UBERON:0004121,7.27e-15,95;UBERON:0000924,7.27e-15,95;UBERON:0006601,7.27e-15,95;UBERON:0010371,1.23e-14,73;UBERON:0003056,1.36e-14,49;UBERON:0000956,9.88e-14,21;UBERON:0001869,9.88e-14,21;UBERON:0000203,9.88e-14,21;UBERON:0002619,5.64e-13,17;UBERON:0002021,9.63e-13,10;UBERON:0000411,9.63e-13,10;UBERON:0001950,9.63e-13,10;UBERON:0010314,2.97e-12,92;UBERON:0001948,1.26e-09,5;UBERON:0002315,1.26e-09,5;UBERON:0002950,5.73e-09,4;UBERON:0001891,5.73e-09,4;UBERON:0009616,5.73e-09,4;UBERON:0010286,5.73e-09,4;UBERON:0002420,1.28e-08,8;UBERON:0007245,1.28e-08,8;UBERON:0010009,1.28e-08,8;UBERON:0010011,1.28e-08,8;UBERON:0000454,1.28e-08,8;UBERON:0000025,1.81e-08,114;UBERON:0002240,5.99e-08,6;UBERON:0005174,5.99e-08,6;UBERON:0001137,5.99e-08,6;UBERON:0004111,1.91e-07,122;UBERON:0002038,2.57e-07,3;UBERON:0009663,2.57e-07,3;UBERON:0009661,2.57e-07,3;UBERON:0000125,2.57e-07,3;UBERON:0002308,2.57e-07,3|phase1_expression=0.960893082628764,0,0,0,0,0.33575854382378,0,0,0.140788722151667,0.234064526321993,0,0.159544317990673,0.171200729931206,0.0874204024189974,0,0.202475267389826,0,0.157731082679119,0,0.42438965179803,0.765389611359628,0.496454756004426,0,0.47997726838022,0.22940928106717,0.57423196411502,0,0.861884930743556,0.380046838912748,0.756090389279792,0.443461021310609,0.635030673459631,0,0,0.288851619751275,0.831173226792462,0.204169356262369,1.25559489221072,0,1.0470474879476,0.588231488031014,0,0,0.755380907853464,0.912392380975631,0.183546752161682,0,1.09012578190223,0.878744730937887,0.777719596297134,0.839918529752175,0,0.167782606057736,0,0.336093799142464,1.54355661621568,0.286533439938757,1.54701627683233,1.21389876515759,0.528990979272033,2.53532561402472,0,0,0,0,0,0.599200221036809,0.768436610643109,0.414758449233911,1.08004750665353,0.630974884054146,1.42825492201902,1.98781686856452,0.244981598429908,1.34183659425531,1.83843757322004,0,1.53224805702225,1.0752457327937,1.45074916503213,1.73826522844578,1.04182674111352,3.07101298901519,1.68828783009504,2.75036845998258,1.17851434189467,2.13557521198654,1.3047961207771,0.454357159999104,1.20914496170857,0.289864488701678,0,0,0,0,0,0.140444420131752,0.340860645156116,2.07828803682295,0.35333957451034,0.14084341977668,1.28326477414318,0,0,1.08245520505607,0.253359865475099,1.01104889002957,0.34255163915718,0.258937883647172,0.445326417194474,0.693941307064543,0.608930956624282,0.230615497256059,0.753613202763113,0.352766121407114,0.753999547978053,0.741584903203122,0.433798070759735,0,0,0.220841518460394,0.969750506270444,0,0.585561594023094,0.628340120440365,0.255457055208591,0.359445373517761,1.19980546198682,0.381210681219194,1.64769703345305,0.915001205637253,0.879580464790051,1.2167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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:268373 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=-54bp_to_ENSMUST00000135789_5end | |||
|cluster_id=chr11:6315806..6315816,+ | |||
|description=CAGE_peak_4_at_Ppia_5end | |||
|id=chr11:6315806..6315816,+ | |||
|ontology_enrichment_celltype=CL:0000117!1.66e-09!23;CL:0000337!1.66e-09!23;CL:0000055!1.27e-07!50;CL:0000393!2.65e-07!39;CL:0000211!2.65e-07!39;CL:0002319!2.85e-07!43;CL:0000221!7.07e-07!44;CL:0000133!7.07e-07!44 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.77e-23,23;CL:0000337,3.77e-23,23;CL:0000393,4.94e-15,39;CL:0000211,4.94e-15,39;CL:0000540,1.01e-14,33;CL:0000047,1.01e-14,33;CL:0000031,1.01e-14,33;CL:0000404,1.01e-14,33;CL:0002319,6.48e-13,43;CL:0000221,1.65e-12,44;CL:0000133,1.65e-12,44;CL:0002321,1.05e-10,70;CL:0000723,5.79e-08,91;CL:0000048,5.79e-08,91;CL:0002614,2.57e-07,3;CL:0000034,4.26e-07,97 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!2.47e-16!34;UBERON:0001049!1.85e-15!52;UBERON:0005068!1.85e-15!52;UBERON:0006241!1.85e-15!52;UBERON:0007135!1.85e-15!52;UBERON:0000073!6.07e-15!75;UBERON:0001016!6.07e-15!75;UBERON:0001017!1.99e-14!73;UBERON:0005743!1.99e-14!73;UBERON:0002346!1.44e-13!71;UBERON:0003075!1.44e-13!71;UBERON:0007284!1.44e-13!71;UBERON:0002791!2.08e-13!29;UBERON:0003528!2.08e-13!29;UBERON:0001893!2.08e-13!29;UBERON:0000955!1.15e-12!50;UBERON:0006238!1.15e-12!50;UBERON:0002616!1.81e-12!49;UBERON:0003080!7.71e-12!40;UBERON:0002780!2.72e-11!39;UBERON:0001890!2.72e-11!39;UBERON:0006240!2.72e-11!39;UBERON:0004121!7.11e-11!102;UBERON:0000924!7.11e-11!102;UBERON:0006601!7.11e-11!102;UBERON:0000033!1.62e-09!63;UBERON:0003056!2.39e-09!49;UBERON:0000956!3.73e-09!21;UBERON:0001869!3.73e-09!21;UBERON:0000203!3.73e-09!21;UBERON:0002619!2.76e-08!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,9.78e-29,34;UBERON:0000073,4.88e-26,54;UBERON:0001049,1.76e-23,52;UBERON:0005068,1.76e-23,52;UBERON:0006241,1.76e-23,52;UBERON:0007135,1.76e-23,52;UBERON:0001016,4.97e-21,75;UBERON:0003528,5.05e-21,29;UBERON:0002791,5.05e-21,29;UBERON:0001893,5.05e-21,29;UBERON:0001017,2.48e-20,73;UBERON:0003080,3.47e-19,40;UBERON:0002780,7.88e-18,39;UBERON:0001890,7.88e-18,39;UBERON:0006240,7.88e-18,39;UBERON:0002346,1.04e-17,64;UBERON:0003075,1.04e-17,64;UBERON:0007284,1.04e-17,64;UBERON:0002616,1.74e-17,46;UBERON:0000955,5.50e-17,47;UBERON:0006238,5.50e-17,47;UBERON:0004121,7.27e-15,95;UBERON:0000924,7.27e-15,95;UBERON:0006601,7.27e-15,95;UBERON:0010371,1.23e-14,73;UBERON:0003056,1.36e-14,49;UBERON:0000956,9.88e-14,21;UBERON:0001869,9.88e-14,21;UBERON:0000203,9.88e-14,21;UBERON:0002619,5.64e-13,17;UBERON:0002021,9.63e-13,10;UBERON:0000411,9.63e-13,10;UBERON:0001950,9.63e-13,10;UBERON:0010314,2.97e-12,92;UBERON:0001948,1.26e-09,5;UBERON:0002315,1.26e-09,5;UBERON:0002950,5.73e-09,4;UBERON:0001891,5.73e-09,4;UBERON:0009616,5.73e-09,4;UBERON:0010286,5.73e-09,4;UBERON:0002420,1.28e-08,8;UBERON:0007245,1.28e-08,8;UBERON:0010009,1.28e-08,8;UBERON:0010011,1.28e-08,8;UBERON:0000454,1.28e-08,8;UBERON:0000025,1.81e-08,114;UBERON:0002240,5.99e-08,6;UBERON:0005174,5.99e-08,6;UBERON:0001137,5.99e-08,6;UBERON:0004111,1.91e-07,122;UBERON:0002038,2.57e-07,3;UBERON:0009663,2.57e-07,3;UBERON:0009661,2.57e-07,3;UBERON:0000125,2.57e-07,3;UBERON:0002308,2.57e-07,3 | |||
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| |||
|short_description=p4@Ppia | |||
}} |
Revision as of 07:13, 6 August 2015
Short description: | p4@Ppia |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Ppia_5end |
Coexpression cluster: | NA |
Association with transcript: | -54bp_to_ENSMUST00000135789_5end |
EntrezGene: | 268373 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.77e-23 | 23 |
neuroblast (sensu Vertebrata) | 3.77e-23 | 23 |
electrically responsive cell | 4.94e-15 | 39 |
electrically active cell | 4.94e-15 | 39 |
neuron | 1.01e-14 | 33 |
neuronal stem cell | 1.01e-14 | 33 |
neuroblast | 1.01e-14 | 33 |
electrically signaling cell | 1.01e-14 | 33 |
neural cell | 6.48e-13 | 43 |
ectodermal cell | 1.65e-12 | 44 |
neurectodermal cell | 1.65e-12 | 44 |
embryonic cell | 1.05e-10 | 70 |
somatic stem cell | 5.79e-08 | 91 |
multi fate stem cell | 5.79e-08 | 91 |
neuron of the substantia nigra | 2.57e-07 | 3 |
stem cell | 4.26e-07 | 97 |