FFCP PHASE1:Mm9::chr13:83854880..83854907,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=609|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr13:83854880..83854907,+|id=chr13:83854880..83854907,+|ontology_enrichment_celltype=CL:0000117!3.90e-19!23;CL:0000337!3.90e-19!23;CL:0002319!1.58e-14!43;CL:0000221!6.05e-14!44;CL:0000133!6.05e-14!44;CL:0000540!1.30e-11!33;CL:0000047!1.30e-11!33;CL:0000031!1.30e-11!33;CL:0000404!1.30e-11!33;CL:0000055!5.54e-11!50;CL:0000393!1.39e-08!39;CL:0000211!1.39e-08!39;CL:0002609!8.68e-08!6|ontology_enrichment_celltype_v019_2=CL:0000117,4.82e-24,23;CL:0000337,4.82e-24,23;CL:0000540,7.56e-15,33;CL:0000047,7.56e-15,33;CL:0000031,7.56e-15,33;CL:0000404,7.56e-15,33;CL:0002319,7.60e-15,43;CL:0000221,2.40e-14,44;CL:0000133,2.40e-14,44;CL:0000393,1.23e-11,39;CL:0000211,1.23e-11,39;CL:0002609,8.39e-11,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!2.14e-32!73;UBERON:0005743!2.14e-32!73;UBERON:0000073!5.60e-32!75;UBERON:0001016!5.60e-32!75;UBERON:0001049!1.17e-31!52;UBERON:0005068!1.17e-31!52;UBERON:0006241!1.17e-31!52;UBERON:0007135!1.17e-31!52;UBERON:0002020!1.44e-30!34;UBERON:0000955!6.02e-29!50;UBERON:0006238!6.02e-29!50;UBERON:0000033!1.07e-28!63;UBERON:0002616!5.21e-28!49;UBERON:0002346!5.31e-28!71;UBERON:0003075!5.31e-28!71;UBERON:0007284!5.31e-28!71;UBERON:0003056!1.67e-26!49;UBERON:0002791!3.17e-26!29;UBERON:0003528!3.17e-26!29;UBERON:0001893!3.17e-26!29;UBERON:0004121!3.30e-25!102;UBERON:0000924!3.30e-25!102;UBERON:0006601!3.30e-25!102;UBERON:0003080!9.12e-24!40;UBERON:0002780!2.13e-23!39;UBERON:0001890!2.13e-23!39;UBERON:0006240!2.13e-23!39;UBERON:0000956!1.02e-20!21;UBERON:0001869!1.02e-20!21;UBERON:0000203!1.02e-20!21;UBERON:0002619!1.35e-16!17;UBERON:0007811!3.79e-16!86;UBERON:0000153!2.53e-13!94;UBERON:0002021!1.10e-10!10;UBERON:0000411!1.10e-10!10;UBERON:0001950!1.10e-10!10;UBERON:0003076!3.56e-08!12;UBERON:0003057!3.56e-08!12;UBERON:0001954!2.44e-07!7;UBERON:0003022!2.44e-07!7;UBERON:0002421!2.44e-07!7;UBERON:0000349!2.44e-07!7;UBERON:0002600!2.44e-07!7|ontology_enrichment_uberon_v019_2=UBERON:0002020,2.99e-40,34;UBERON:0003528,7.74e-34,29;UBERON:0002791,7.74e-34,29;UBERON:0001893,7.74e-34,29;UBERON:0000073,1.82e-30,54;UBERON:0001049,2.18e-30,52;UBERON:0005068,2.18e-30,52;UBERON:0006241,2.18e-30,52;UBERON:0007135,2.18e-30,52;UBERON:0002346,2.06e-29,64;UBERON:0003075,2.06e-29,64;UBERON:0007284,2.06e-29,64;UBERON:0001017,1.13e-28,73;UBERON:0000956,8.69e-28,21;UBERON:0001869,8.69e-28,21;UBERON:0000203,8.69e-28,21;UBERON:0001016,1.41e-27,75;UBERON:0000955,1.59e-26,47;UBERON:0006238,1.59e-26,47;UBERON:0002616,2.65e-25,46;UBERON:0002780,1.08e-24,39;UBERON:0001890,1.08e-24,39;UBERON:0006240,1.08e-24,39;UBERON:0003056,1.13e-24,49;UBERON:0004121,1.70e-24,95;UBERON:0000924,1.70e-24,95;UBERON:0006601,1.70e-24,95;UBERON:0010371,2.50e-24,73;UBERON:0003080,7.39e-24,40;UBERON:0002619,1.03e-21,17;UBERON:0010314,6.62e-17,92;UBERON:0002021,4.28e-15,10;UBERON:0000411,4.28e-15,10;UBERON:0001950,4.28e-15,10;UBERON:0000025,2.97e-08,114;UBERON:0001954,3.89e-08,7;UBERON:0003022,3.89e-08,7;UBERON:0002421,3.89e-08,7;UBERON:0000349,3.89e-08,7;UBERON:0002600,3.89e-08,7;UBERON:0002420,2.37e-07,8;UBERON:0007245,2.37e-07,8;UBERON:0010009,2.37e-07,8;UBERON:0010011,2.37e-07,8;UBERON:0000454,2.37e-07,8;UBERON:0001948,2.54e-07,5;UBERON:0002315,2.54e-07,5;UBERON:0004111,4.21e-07,122;UBERON:0003076,5.99e-07,12;UBERON:0003057,5.99e-07,12|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96222640742402,1.31811709640683,0.777719596297134,0.979904951377538,1.43752564364972,0,0,0,0,0,0,2.42779753031517,4.23192783417626,4.43681982454325,0,0,0,0,0,0.898800331555214,1.53687322128622,11.8206158031665,14.850653216486,10.5162480675691,1.99955689082663,1.54607978666129,8.69684674426174,7.57179221044067,11.9498442259303,1.10115880999389,0.510749352340751,0.307213066512487,2.37395317914349,1.64677758484337,3.64639359389732,1.3959149950069,1.68828783009504,1.22238598221448,5.00868595305235,3.98640706237488,5.21918448310842,0.075726193333184,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.1256702864388,6.91174132484402,0,0,0,0,0.449371918214468,0.915001205637253,2.63874139437015,3.82413504423008,2.04572365864264,0.20778804455956,1.29793010454206,0,0,0,0.210441855886474,0,0,0.360124259610698,1.05493372485001,2.9255694635071,7.94305065766069,6.37171727006156,0.776110112217047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219550115291051,0,5.88811855979556,7.30622747892919,0,0,0,0,0,0,0.22237804384487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.963303539926752,0.468846746368813,0,0,0,0,0.215423397732799,0,0,0,0,0,0,4.4984984299053,0,0,0,0,0,0,0,0,0,0.307435147943927,0,0,0,0,0,0,0,0.36012218806262,0.129358683782755,0.214337035031592,0,0.178368817602071,0,0,0,0,0,0,0,0,0,0,0,0.927126510052548,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.03602948187307,4.60325236507177,6.87474616127276,3.43706364687375,7.53590771747707,5.2877572817279,5.40018000185445,7.65546045481175,4.53142408984205,5.69536342927002,1.66059756134683,1.59609949360412,2.04880326904961,0,0.628839487883947,0.367687016900028,0.44449345560323,1.23621034343337,1.28367683836726,0,2.02783439912192,1.69763707247469,0.936415074698824,1.02440243847791,0.459483751644906,1.42888107384922,0.811190281613988,0.38581844092741,1.23625770240992,0.588795680537589,1.71434626192708,0.70990322463735,0.953744759789284,0.872078499793971,1.12931256498397,1.26921911837515,1.64635175585495,1.31534855718921,0.407412341537585,0.561142271657738,0.593175090620871,0.886540341380071,1.63692417267876,0.619747364743864,0.771626443924566,1.49886346762768,1.16965804222704,0.429742108096597,0,0,0.231867835620421|short_description=p@chr13:83854880..83854907,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=609 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr13:83854880..83854907,+ | |||
|description=CAGE_peak_at_chr13:83854880..83854907,+ | |||
|id=chr13:83854880..83854907,+ | |||
|ontology_enrichment_celltype=CL:0000117!3.90e-19!23;CL:0000337!3.90e-19!23;CL:0002319!1.58e-14!43;CL:0000221!6.05e-14!44;CL:0000133!6.05e-14!44;CL:0000540!1.30e-11!33;CL:0000047!1.30e-11!33;CL:0000031!1.30e-11!33;CL:0000404!1.30e-11!33;CL:0000055!5.54e-11!50;CL:0000393!1.39e-08!39;CL:0000211!1.39e-08!39;CL:0002609!8.68e-08!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,4.82e-24,23;CL:0000337,4.82e-24,23;CL:0000540,7.56e-15,33;CL:0000047,7.56e-15,33;CL:0000031,7.56e-15,33;CL:0000404,7.56e-15,33;CL:0002319,7.60e-15,43;CL:0000221,2.40e-14,44;CL:0000133,2.40e-14,44;CL:0000393,1.23e-11,39;CL:0000211,1.23e-11,39;CL:0002609,8.39e-11,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.14e-32!73;UBERON:0005743!2.14e-32!73;UBERON:0000073!5.60e-32!75;UBERON:0001016!5.60e-32!75;UBERON:0001049!1.17e-31!52;UBERON:0005068!1.17e-31!52;UBERON:0006241!1.17e-31!52;UBERON:0007135!1.17e-31!52;UBERON:0002020!1.44e-30!34;UBERON:0000955!6.02e-29!50;UBERON:0006238!6.02e-29!50;UBERON:0000033!1.07e-28!63;UBERON:0002616!5.21e-28!49;UBERON:0002346!5.31e-28!71;UBERON:0003075!5.31e-28!71;UBERON:0007284!5.31e-28!71;UBERON:0003056!1.67e-26!49;UBERON:0002791!3.17e-26!29;UBERON:0003528!3.17e-26!29;UBERON:0001893!3.17e-26!29;UBERON:0004121!3.30e-25!102;UBERON:0000924!3.30e-25!102;UBERON:0006601!3.30e-25!102;UBERON:0003080!9.12e-24!40;UBERON:0002780!2.13e-23!39;UBERON:0001890!2.13e-23!39;UBERON:0006240!2.13e-23!39;UBERON:0000956!1.02e-20!21;UBERON:0001869!1.02e-20!21;UBERON:0000203!1.02e-20!21;UBERON:0002619!1.35e-16!17;UBERON:0007811!3.79e-16!86;UBERON:0000153!2.53e-13!94;UBERON:0002021!1.10e-10!10;UBERON:0000411!1.10e-10!10;UBERON:0001950!1.10e-10!10;UBERON:0003076!3.56e-08!12;UBERON:0003057!3.56e-08!12;UBERON:0001954!2.44e-07!7;UBERON:0003022!2.44e-07!7;UBERON:0002421!2.44e-07!7;UBERON:0000349!2.44e-07!7;UBERON:0002600!2.44e-07!7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,2.99e-40,34;UBERON:0003528,7.74e-34,29;UBERON:0002791,7.74e-34,29;UBERON:0001893,7.74e-34,29;UBERON:0000073,1.82e-30,54;UBERON:0001049,2.18e-30,52;UBERON:0005068,2.18e-30,52;UBERON:0006241,2.18e-30,52;UBERON:0007135,2.18e-30,52;UBERON:0002346,2.06e-29,64;UBERON:0003075,2.06e-29,64;UBERON:0007284,2.06e-29,64;UBERON:0001017,1.13e-28,73;UBERON:0000956,8.69e-28,21;UBERON:0001869,8.69e-28,21;UBERON:0000203,8.69e-28,21;UBERON:0001016,1.41e-27,75;UBERON:0000955,1.59e-26,47;UBERON:0006238,1.59e-26,47;UBERON:0002616,2.65e-25,46;UBERON:0002780,1.08e-24,39;UBERON:0001890,1.08e-24,39;UBERON:0006240,1.08e-24,39;UBERON:0003056,1.13e-24,49;UBERON:0004121,1.70e-24,95;UBERON:0000924,1.70e-24,95;UBERON:0006601,1.70e-24,95;UBERON:0010371,2.50e-24,73;UBERON:0003080,7.39e-24,40;UBERON:0002619,1.03e-21,17;UBERON:0010314,6.62e-17,92;UBERON:0002021,4.28e-15,10;UBERON:0000411,4.28e-15,10;UBERON:0001950,4.28e-15,10;UBERON:0000025,2.97e-08,114;UBERON:0001954,3.89e-08,7;UBERON:0003022,3.89e-08,7;UBERON:0002421,3.89e-08,7;UBERON:0000349,3.89e-08,7;UBERON:0002600,3.89e-08,7;UBERON:0002420,2.37e-07,8;UBERON:0007245,2.37e-07,8;UBERON:0010009,2.37e-07,8;UBERON:0010011,2.37e-07,8;UBERON:0000454,2.37e-07,8;UBERON:0001948,2.54e-07,5;UBERON:0002315,2.54e-07,5;UBERON:0004111,4.21e-07,122;UBERON:0003076,5.99e-07,12;UBERON:0003057,5.99e-07,12 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96222640742402,1.31811709640683,0.777719596297134,0.979904951377538,1.43752564364972,0,0,0,0,0,0,2.42779753031517,4.23192783417626,4.43681982454325,0,0,0,0,0,0.898800331555214,1.53687322128622,11.8206158031665,14.850653216486,10.5162480675691,1.99955689082663,1.54607978666129,8.69684674426174,7.57179221044067,11.9498442259303,1.10115880999389,0.510749352340751,0.307213066512487,2.37395317914349,1.64677758484337,3.64639359389732,1.3959149950069,1.68828783009504,1.22238598221448,5.00868595305235,3.98640706237488,5.21918448310842,0.075726193333184,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.1256702864388,6.91174132484402,0,0,0,0,0.449371918214468,0.915001205637253,2.63874139437015,3.82413504423008,2.04572365864264,0.20778804455956,1.29793010454206,0,0,0,0.210441855886474,0,0,0.360124259610698,1.05493372485001,2.9255694635071,7.94305065766069,6.37171727006156,0.776110112217047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219550115291051,0,5.88811855979556,7.30622747892919,0,0,0,0,0,0,0.22237804384487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.963303539926752,0.468846746368813,0,0,0,0,0.215423397732799,0,0,0,0,0,0,4.4984984299053,0,0,0,0,0,0,0,0,0,0.307435147943927,0,0,0,0,0,0,0,0.36012218806262,0.129358683782755,0.214337035031592,0,0.178368817602071,0,0,0,0,0,0,0,0,0,0,0,0.927126510052548,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.03602948187307,4.60325236507177,6.87474616127276,3.43706364687375,7.53590771747707,5.2877572817279,5.40018000185445,7.65546045481175,4.53142408984205,5.69536342927002,1.66059756134683,1.59609949360412,2.04880326904961,0,0.628839487883947,0.367687016900028,0.44449345560323,1.23621034343337,1.28367683836726,0,2.02783439912192,1.69763707247469,0.936415074698824,1.02440243847791,0.459483751644906,1.42888107384922,0.811190281613988,0.38581844092741,1.23625770240992,0.588795680537589,1.71434626192708,0.70990322463735,0.953744759789284,0.872078499793971,1.12931256498397,1.26921911837515,1.64635175585495,1.31534855718921,0.407412341537585,0.561142271657738,0.593175090620871,0.886540341380071,1.63692417267876,0.619747364743864,0.771626443924566,1.49886346762768,1.16965804222704,0.429742108096597,0,0,0.231867835620421 | |||
|short_description=p@chr13:83854880..83854907,+ | |||
}} |
Latest revision as of 09:02, 6 August 2015
Short description: | p@chr13:83854880..83854907, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:83854880..83854907, + |
Coexpression cluster: | MCL_coexpression_mm9:609 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 4.82e-24 | 23 |
neuroblast (sensu Vertebrata) | 4.82e-24 | 23 |
neuron | 7.56e-15 | 33 |
neuronal stem cell | 7.56e-15 | 33 |
neuroblast | 7.56e-15 | 33 |
electrically signaling cell | 7.56e-15 | 33 |
neural cell | 7.60e-15 | 43 |
ectodermal cell | 2.40e-14 | 44 |
neurectodermal cell | 2.40e-14 | 44 |
electrically responsive cell | 1.23e-11 | 39 |
electrically active cell | 1.23e-11 | 39 |
neuron of cerebral cortex | 8.39e-11 | 6 |