FFCP PHASE2:Hg19::chr13:31038831..31038846,-
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| Short description: | p9@HMGB1 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_9_at_HMGB1_5end |
| Coexpression cluster: | NA |
| Association with transcript: | -384bp_to_ENST00000339872, ENST00000426225_5end |
| EntrezGene: | HMGB1 |
| HGNC: | 4983 |
| UniProt: | P09429Q5T7C6 |
| Genome view: | ZENBU |
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CAGE Expression
| Sample | p9@HMGB1 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| mature alpha-beta T cell | 1.72e-12 | 18 |
| alpha-beta T cell | 1.72e-12 | 18 |
| immature T cell | 1.72e-12 | 18 |
| mature T cell | 1.72e-12 | 18 |
| immature alpha-beta T cell | 1.72e-12 | 18 |
| CD8-positive, alpha-beta T cell | 6.27e-09 | 11 |
| T cell | 1.28e-07 | 25 |
| pro-T cell | 1.28e-07 | 25 |
| lymphoid lineage restricted progenitor cell | 2.13e-07 | 52 |
| lymphocyte | 4.01e-07 | 53 |
Showing 1 to 10 of 11 entries
| Ontology term | p-value | n |
|---|---|---|
| neural tube | 1.84e-32 | 56 |
| neural rod | 1.84e-32 | 56 |
| future spinal cord | 1.84e-32 | 56 |
| neural keel | 1.84e-32 | 56 |
| regional part of nervous system | 2.09e-29 | 53 |
| regional part of brain | 2.09e-29 | 53 |
| nervous system | 7.53e-25 | 89 |
| regional part of forebrain | 3.67e-24 | 41 |
| forebrain | 3.67e-24 | 41 |
| anterior neural tube | 3.67e-24 | 41 |
Showing 1 to 10 of 46 entries
