Personal tools

FFCP PHASE1:Mm9::chr11:78137805..78137897,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 8: Line 8:
|id=chr11:78137805..78137897,+
|id=chr11:78137805..78137897,+
|ontology_enrichment_celltype=CL:0000221!1.06e-17!44;CL:0000133!1.06e-17!44;CL:0002319!1.56e-17!43;CL:0000117!2.15e-16!23;CL:0000337!2.15e-16!23;CL:0000055!2.96e-13!50;CL:0000540!4.40e-13!33;CL:0000047!4.40e-13!33;CL:0000031!4.40e-13!33;CL:0000404!4.40e-13!33;CL:0000393!1.29e-09!39;CL:0000211!1.29e-09!39;CL:0002321!1.40e-07!70;CL:0000220!1.40e-07!70
|ontology_enrichment_celltype=CL:0000221!1.06e-17!44;CL:0000133!1.06e-17!44;CL:0002319!1.56e-17!43;CL:0000117!2.15e-16!23;CL:0000337!2.15e-16!23;CL:0000055!2.96e-13!50;CL:0000540!4.40e-13!33;CL:0000047!4.40e-13!33;CL:0000031!4.40e-13!33;CL:0000404!4.40e-13!33;CL:0000393!1.29e-09!39;CL:0000211!1.29e-09!39;CL:0002321!1.40e-07!70;CL:0000220!1.40e-07!70
|ontology_enrichment_celltype_v019_2=CL:0000117,5.12e-19,23;CL:0000337,5.12e-19,23;CL:0002319,9.40e-16,43;CL:0000221,3.51e-15,44;CL:0000133,3.51e-15,44;CL:0000540,3.90e-11,33;CL:0000047,3.90e-11,33;CL:0000031,3.90e-11,33;CL:0000404,3.90e-11,33;CL:0000393,1.97e-08,39;CL:0000211,1.97e-08,39;CL:0002453,1.16e-07,8
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!3.85e-35!73;UBERON:0005743!3.85e-35!73;UBERON:0000073!1.58e-34!75;UBERON:0001016!1.58e-34!75;UBERON:0001049!6.03e-29!52;UBERON:0005068!6.03e-29!52;UBERON:0006241!6.03e-29!52;UBERON:0007135!6.03e-29!52;UBERON:0000955!6.73e-27!50;UBERON:0006238!6.73e-27!50;UBERON:0002616!4.30e-26!49;UBERON:0002020!3.54e-25!34;UBERON:0004121!4.26e-24!102;UBERON:0000924!4.26e-24!102;UBERON:0006601!4.26e-24!102;UBERON:0000033!3.11e-22!63;UBERON:0002346!1.65e-20!71;UBERON:0003075!1.65e-20!71;UBERON:0007284!1.65e-20!71;UBERON:0002791!1.90e-20!29;UBERON:0003528!1.90e-20!29;UBERON:0001893!1.90e-20!29;UBERON:0003080!3.97e-18!40;UBERON:0002780!2.82e-17!39;UBERON:0001890!2.82e-17!39;UBERON:0006240!2.82e-17!39;UBERON:0003056!4.93e-15!49;UBERON:0000956!2.37e-14!21;UBERON:0001869!2.37e-14!21;UBERON:0000203!2.37e-14!21;UBERON:0003076!7.70e-12!12;UBERON:0003057!7.70e-12!12;UBERON:0002619!1.07e-11!17;UBERON:0007811!1.26e-11!86;UBERON:0000153!8.35e-10!94;UBERON:0002021!2.42e-09!10;UBERON:0000411!2.42e-09!10;UBERON:0001950!2.42e-09!10;UBERON:0002420!2.75e-07!8;UBERON:0007245!2.75e-07!8;UBERON:0010009!2.75e-07!8;UBERON:0010011!2.75e-07!8;UBERON:0000454!2.75e-07!8;UBERON:0002298!3.90e-07!6;UBERON:0002240!6.11e-07!6;UBERON:0005174!6.11e-07!6;UBERON:0001137!6.11e-07!6
|ontology_enrichment_uberon=UBERON:0001017!3.85e-35!73;UBERON:0005743!3.85e-35!73;UBERON:0000073!1.58e-34!75;UBERON:0001016!1.58e-34!75;UBERON:0001049!6.03e-29!52;UBERON:0005068!6.03e-29!52;UBERON:0006241!6.03e-29!52;UBERON:0007135!6.03e-29!52;UBERON:0000955!6.73e-27!50;UBERON:0006238!6.73e-27!50;UBERON:0002616!4.30e-26!49;UBERON:0002020!3.54e-25!34;UBERON:0004121!4.26e-24!102;UBERON:0000924!4.26e-24!102;UBERON:0006601!4.26e-24!102;UBERON:0000033!3.11e-22!63;UBERON:0002346!1.65e-20!71;UBERON:0003075!1.65e-20!71;UBERON:0007284!1.65e-20!71;UBERON:0002791!1.90e-20!29;UBERON:0003528!1.90e-20!29;UBERON:0001893!1.90e-20!29;UBERON:0003080!3.97e-18!40;UBERON:0002780!2.82e-17!39;UBERON:0001890!2.82e-17!39;UBERON:0006240!2.82e-17!39;UBERON:0003056!4.93e-15!49;UBERON:0000956!2.37e-14!21;UBERON:0001869!2.37e-14!21;UBERON:0000203!2.37e-14!21;UBERON:0003076!7.70e-12!12;UBERON:0003057!7.70e-12!12;UBERON:0002619!1.07e-11!17;UBERON:0007811!1.26e-11!86;UBERON:0000153!8.35e-10!94;UBERON:0002021!2.42e-09!10;UBERON:0000411!2.42e-09!10;UBERON:0001950!2.42e-09!10;UBERON:0002420!2.75e-07!8;UBERON:0007245!2.75e-07!8;UBERON:0010009!2.75e-07!8;UBERON:0010011!2.75e-07!8;UBERON:0000454!2.75e-07!8;UBERON:0002298!3.90e-07!6;UBERON:0002240!6.11e-07!6;UBERON:0005174!6.11e-07!6;UBERON:0001137!6.11e-07!6
|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.10e-36,73;UBERON:0000073,7.01e-36,54;UBERON:0001016,8.54e-35,75;UBERON:0001049,2.07e-33,52;UBERON:0005068,2.07e-33,52;UBERON:0006241,2.07e-33,52;UBERON:0007135,2.07e-33,52;UBERON:0002020,4.24e-30,34;UBERON:0000955,2.95e-27,47;UBERON:0006238,2.95e-27,47;UBERON:0002616,2.76e-26,46;UBERON:0004121,4.34e-26,95;UBERON:0000924,4.34e-26,95;UBERON:0006601,4.34e-26,95;UBERON:0002346,1.08e-25,64;UBERON:0003075,1.08e-25,64;UBERON:0007284,1.08e-25,64;UBERON:0003528,3.82e-24,29;UBERON:0002791,3.82e-24,29;UBERON:0001893,3.82e-24,29;UBERON:0010371,6.14e-22,73;UBERON:0003080,4.69e-20,40;UBERON:0002780,5.15e-19,39;UBERON:0001890,5.15e-19,39;UBERON:0006240,5.15e-19,39;UBERON:0000956,1.81e-16,21;UBERON:0001869,1.81e-16,21;UBERON:0000203,1.81e-16,21;UBERON:0003056,1.26e-15,49;UBERON:0003076,1.34e-14,12;UBERON:0003057,1.34e-14,12;UBERON:0010314,1.43e-13,92;UBERON:0002619,3.99e-13,17;UBERON:0002021,1.98e-11,10;UBERON:0000411,1.98e-11,10;UBERON:0001950,1.98e-11,10;UBERON:0002420,7.88e-09,8;UBERON:0007245,7.88e-09,8;UBERON:0010009,7.88e-09,8;UBERON:0010011,7.88e-09,8;UBERON:0000454,7.88e-09,8;UBERON:0002240,2.17e-08,6;UBERON:0005174,2.17e-08,6;UBERON:0001137,2.17e-08,6;UBERON:0000025,6.70e-08,114;UBERON:0004733,9.86e-08,6;UBERON:0004732,9.86e-08,6;UBERON:0002028,9.86e-08,6;UBERON:0007277,9.86e-08,6;UBERON:0001948,3.75e-07,5;UBERON:0002315,3.75e-07,5
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.65389611359628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.34717403304412,9.81113203712009,12.9614847813338,10.6936444490856,2.65974201088189,2.87505128729943,0,0,0,0,0,0,3.43937983461316,8.46385566835253,6.33831403506179,0,0,0,0,0,2.09720077362883,5.76327457982332,3.52544681848824,5.53524347159932,4.83747411108179,92.8365699312362,73.9909612187905,1.71487118900936,0.958454710182364,0,57.2602581196821,56.8208654479085,51.3045821075853,1.97829431595291,3.56801810049398,2.6045668527838,76.4961417263784,38.8306200921859,58.3689306507415,47.1405736757868,50.2572033220833,11.5567656411686,0.075726193333184,0,0,0,0,0,0,0.448026887097336,1.68533304158102,0,0,0,0.14084341977668,0,0,0,0,0.253359865475099,0,0.5709193985953,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,42.7459963636859,47.9632958602812,0,0,0,0,44.1882386244227,37.5150494311274,8.04187853522332,31.8098505951866,43.7273432034865,51.5314350507709,44.2918648174978,0,0,0,0.210441855886474,0,0,0,0,0,0,0.281105173679186,1.81092359517311,0,0,0,0,0,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0.116765342367169,0,0,0,0,0,0,23.3421842906181,8.95270127699774,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.45882136509518,0,95.3670504527484,84.3924143463863,0,0.252470927204373,0,0.390438744296638,0.215423397732799,0,0,0,0.404810701674894,0.292255857911312,0.790575555893047,17.9939937196212,0.425820255624806,0.178065603667255,0,0.824850614862677,0,0,0,0,0,0,0,0.363533729477506,0,0,0,0,0,0,0,0,0,0,0.329098041204242,0.913394847343798,0,0,0,0,0,0,0,0,0,81.2162822806032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0,0,0,0,41.2268845110459,37.2863441570813,37.8111038870002,37.6358469332676,32.8839609489908,36.2589070747056,35.1011700120539,34.2244114450408,23.1102628581944,42.4563455636492,0,0,0.341467211508268,0.729320151204882,0.838452650511929,0.735374033800057,2.22246727801615,0.412070114477788,2.88827288632634,2.52697211763797,1.52087579934144,1.50901073108861,1.591905626988,1.47257850531199,1.60819313075717,0.952587382566147,1.15884325944855,1.15745532278223,0.824171801606613,1.91358596174717,2.40008476669791,1.06485483695602,1.43061713968393,1.45346416632329,1.78807822789128,1.60767754994185,1.46342378298218,1.8414879800649,1.90125759384206,0.561142271657738,1.30498519936592,1.57607171800902,1.63692417267876,1.85924209423159,0.771626443924566,2.24829520144151,1.63752125911786,2.14871054048298,1.53030665655075,1.32354851471709,1.39120701372253
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.65389611359628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.34717403304412,9.81113203712009,12.9614847813338,10.6936444490856,2.65974201088189,2.87505128729943,0,0,0,0,0,0,3.43937983461316,8.46385566835253,6.33831403506179,0,0,0,0,0,2.09720077362883,5.76327457982332,3.52544681848824,5.53524347159932,4.83747411108179,92.8365699312362,73.9909612187905,1.71487118900936,0.958454710182364,0,57.2602581196821,56.8208654479085,51.3045821075853,1.97829431595291,3.56801810049398,2.6045668527838,76.4961417263784,38.8306200921859,58.3689306507415,47.1405736757868,50.2572033220833,11.5567656411686,0.075726193333184,0,0,0,0,0,0,0.448026887097336,1.68533304158102,0,0,0,0.14084341977668,0,0,0,0,0.253359865475099,0,0.5709193985953,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,42.7459963636859,47.9632958602812,0,0,0,0,44.1882386244227,37.5150494311274,8.04187853522332,31.8098505951866,43.7273432034865,51.5314350507709,44.2918648174978,0,0,0,0.210441855886474,0,0,0,0,0,0,0.281105173679186,1.81092359517311,0,0,0,0,0,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0.116765342367169,0,0,0,0,0,0,23.3421842906181,8.95270127699774,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.45882136509518,0,95.3670504527484,84.3924143463863,0,0.252470927204373,0,0.390438744296638,0.215423397732799,0,0,0,0.404810701674894,0.292255857911312,0.790575555893047,17.9939937196212,0.425820255624806,0.178065603667255,0,0.824850614862677,0,0,0,0,0,0,0,0.363533729477506,0,0,0,0,0,0,0,0,0,0,0.329098041204242,0.913394847343798,0,0,0,0,0,0,0,0,0,81.2162822806032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0,0,0,0,41.2268845110459,37.2863441570813,37.8111038870002,37.6358469332676,32.8839609489908,36.2589070747056,35.1011700120539,34.2244114450408,23.1102628581944,42.4563455636492,0,0,0.341467211508268,0.729320151204882,0.838452650511929,0.735374033800057,2.22246727801615,0.412070114477788,2.88827288632634,2.52697211763797,1.52087579934144,1.50901073108861,1.591905626988,1.47257850531199,1.60819313075717,0.952587382566147,1.15884325944855,1.15745532278223,0.824171801606613,1.91358596174717,2.40008476669791,1.06485483695602,1.43061713968393,1.45346416632329,1.78807822789128,1.60767754994185,1.46342378298218,1.8414879800649,1.90125759384206,0.561142271657738,1.30498519936592,1.57607171800902,1.63692417267876,1.85924209423159,0.771626443924566,2.24829520144151,1.63752125911786,2.14871054048298,1.53030665655075,1.32354851471709,1.39120701372253
|short_description=p4@Aldoc
|short_description=p4@Aldoc
}}
}}

Revision as of 21:21, 13 November 2012

Short description:p4@Aldoc
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Aldoc_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 0bp_to_ENSMUST00000128032_5end
EntrezGene:Aldoc
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Aldoc

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A37.65
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B72.35
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C29.81
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B812.96
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C310.69
Mouse Astrocytes, donor2.CNhs12078.11552-120C42.66
Mouse Astrocytes, donor3.CNhs12107.11633-122C42.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C33.44
Mouse Granule cells, donor2.CNhs12357.11731-123E38.46
Mouse Granule cells, donor3.CNhs12108.11636-122C76.34
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C82.10
Mouse Microglia, donor2.CNhs12634.11736-123E85.76
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D53.53
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F55.54
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D94.84
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F192.84
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D573.99
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.71
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.96
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D357.26
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F356.82
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D751.30
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.98
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F43.57
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.60
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E476.50
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E538.83
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I658.37
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D647.14
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F650.26
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E111.56
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.69
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.57
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.00
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B242.75
cerebellum, neonate N30.CNhs11135.1395-42I247.96
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A444.19
corpus striatum, adult.CNhs10487.19-21D837.52
corpus striatum, neonate N00.CNhs11226.630-43F18.04
cortex, adult.CNhs10473.12-14D531.81
cortex, neonate N30.CNhs11107.1392-42F243.73
diencephalon, adult.CNhs10482.20-12F251.53
diencephalon, neonate N30.CNhs11201.1388-42B244.29
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.00
eyeball, neonate N00.CNhs11207.633-15C60.00
eyeball, neonate N01.CNhs11140.1532-43E70.00
eyeball, neonate N02.CNhs11205.1551-44G80.28
eyeball, neonate N16.CNhs11188.777-19A21.81
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E823.34
hippocampus, neonate N00.CNhs11228.627-43G18.95
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B62.46
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C295.37
medulla oblongata, neonate N30.CNhs11200.1396-42A384.39
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I917.99
ovary, adult.CNhs10507.91-2I70.43
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.82
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.33
pituitary gland, neonate N00.CNhs11190.1308-22E90.91
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C981.22
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.00
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A141.23
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A237.29
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A337.81
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D737.64
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A432.88
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A536.26
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A635.10
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A734.22
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A823.11
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A942.46
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.34
whole body, embryo E14.5.CNhs10578.420-27D20.73
whole body, embryo E14.CNhs10519.395-14B10.84
whole body, embryo E16.CNhs10514.453-14F20.74
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.89
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.53
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.51
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.59
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.47
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.61
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.40
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.06
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.45
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.79
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.61
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.46
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.84
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.90
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.30
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.58
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.64
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.86
whole body, embryo E17.5.CNhs10513.490-9F90.77
whole body, embryo E17.CNhs10517.475-3I52.25
whole body, embryo E18.CNhs10516.493-3B31.64
whole body, neonate N00.CNhs10525.657-19C22.15
whole body, neonate N01.CNhs10576.659-23C61.53
whole body, neonate N06.CNhs10515.692-21D11.32
whole body, neonate N10.CNhs10518.761-6B41.39





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
central nervous system3.10e-3673
regional part of nervous system7.01e-3654
nervous system8.54e-3575
neural tube2.07e-3352
neural rod2.07e-3352
future spinal cord2.07e-3352
neural keel2.07e-3352
gray matter4.24e-3034
brain2.95e-2747
future brain2.95e-2747
regional part of brain2.76e-2646
ectoderm-derived structure4.34e-2695
ectoderm4.34e-2695
presumptive ectoderm4.34e-2695
neurectoderm1.08e-2564
neural plate1.08e-2564
presumptive neural plate1.08e-2564
brain grey matter3.82e-2429
regional part of telencephalon3.82e-2429
telencephalon3.82e-2429
ecto-epithelium6.14e-2273
anterior neural tube4.69e-2040
regional part of forebrain5.15e-1939
forebrain5.15e-1939
future forebrain5.15e-1939
cerebral cortex1.81e-1621
cerebral hemisphere1.81e-1621
pallium1.81e-1621
pre-chordal neural plate1.26e-1549
posterior neural tube1.34e-1412
chordal neural plate1.34e-1412
structure with developmental contribution from neural crest1.43e-1392
regional part of cerebral cortex3.99e-1317
occipital lobe1.98e-1110
visual cortex1.98e-1110
neocortex1.98e-1110
basal ganglion7.88e-098
nuclear complex of neuraxis7.88e-098
aggregate regional part of brain7.88e-098
collection of basal ganglia7.88e-098
cerebral subcortex7.88e-098
spinal cord2.17e-086
dorsal region element2.17e-086
dorsum2.17e-086
tube6.70e-08114
segmental subdivision of hindbrain9.86e-086
segmental subdivision of nervous system9.86e-086
hindbrain9.86e-086
presumptive hindbrain9.86e-086
regional part of spinal cord3.75e-075
gray matter of spinal cord3.75e-075







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr11:78137805..78137897,%2B&oldid=2278624"