FFCP PHASE1:Mm9::chr11:78137805..78137897,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=11676|HGNC=|MCL_coexpression_id=1|UniProt=|association_with_transcript=0bp_to_ENSMUST00000128032_5end|description=CAGE_peak_4_at_Aldoc_5end|id=chr11:78137805..78137897,+|ontology_enrichment_celltype=CL:0000221!1.06e-17!44;CL:0000133!1.06e-17!44;CL:0002319!1.56e-17!43;CL:0000117!2.15e-16!23;CL:0000337!2.15e-16!23;CL:0000055!2.96e-13!50;CL:0000540!4.40e-13!33;CL:0000047!4.40e-13!33;CL:0000031!4.40e-13!33;CL:0000404!4.40e-13!33;CL:0000393!1.29e-09!39;CL:0000211!1.29e-09!39;CL:0002321!1.40e-07!70;CL:0000220!1.40e-07!70|ontology_enrichment_celltype_v019_2=CL:0000117,5.12e-19,23;CL:0000337,5.12e-19,23;CL:0002319,9.40e-16,43;CL:0000221,3.51e-15,44;CL:0000133,3.51e-15,44;CL:0000540,3.90e-11,33;CL:0000047,3.90e-11,33;CL:0000031,3.90e-11,33;CL:0000404,3.90e-11,33;CL:0000393,1.97e-08,39;CL:0000211,1.97e-08,39;CL:0002453,1.16e-07,8|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!3.85e-35!73;UBERON:0005743!3.85e-35!73;UBERON:0000073!1.58e-34!75;UBERON:0001016!1.58e-34!75;UBERON:0001049!6.03e-29!52;UBERON:0005068!6.03e-29!52;UBERON:0006241!6.03e-29!52;UBERON:0007135!6.03e-29!52;UBERON:0000955!6.73e-27!50;UBERON:0006238!6.73e-27!50;UBERON:0002616!4.30e-26!49;UBERON:0002020!3.54e-25!34;UBERON:0004121!4.26e-24!102;UBERON:0000924!4.26e-24!102;UBERON:0006601!4.26e-24!102;UBERON:0000033!3.11e-22!63;UBERON:0002346!1.65e-20!71;UBERON:0003075!1.65e-20!71;UBERON:0007284!1.65e-20!71;UBERON:0002791!1.90e-20!29;UBERON:0003528!1.90e-20!29;UBERON:0001893!1.90e-20!29;UBERON:0003080!3.97e-18!40;UBERON:0002780!2.82e-17!39;UBERON:0001890!2.82e-17!39;UBERON:0006240!2.82e-17!39;UBERON:0003056!4.93e-15!49;UBERON:0000956!2.37e-14!21;UBERON:0001869!2.37e-14!21;UBERON:0000203!2.37e-14!21;UBERON:0003076!7.70e-12!12;UBERON:0003057!7.70e-12!12;UBERON:0002619!1.07e-11!17;UBERON:0007811!1.26e-11!86;UBERON:0000153!8.35e-10!94;UBERON:0002021!2.42e-09!10;UBERON:0000411!2.42e-09!10;UBERON:0001950!2.42e-09!10;UBERON:0002420!2.75e-07!8;UBERON:0007245!2.75e-07!8;UBERON:0010009!2.75e-07!8;UBERON:0010011!2.75e-07!8;UBERON:0000454!2.75e-07!8;UBERON:0002298!3.90e-07!6;UBERON:0002240!6.11e-07!6;UBERON:0005174!6.11e-07!6;UBERON:0001137!6.11e-07!6|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.10e-36,73;UBERON:0000073,7.01e-36,54;UBERON:0001016,8.54e-35,75;UBERON:0001049,2.07e-33,52;UBERON:0005068,2.07e-33,52;UBERON:0006241,2.07e-33,52;UBERON:0007135,2.07e-33,52;UBERON:0002020,4.24e-30,34;UBERON:0000955,2.95e-27,47;UBERON:0006238,2.95e-27,47;UBERON:0002616,2.76e-26,46;UBERON:0004121,4.34e-26,95;UBERON:0000924,4.34e-26,95;UBERON:0006601,4.34e-26,95;UBERON:0002346,1.08e-25,64;UBERON:0003075,1.08e-25,64;UBERON:0007284,1.08e-25,64;UBERON:0003528,3.82e-24,29;UBERON:0002791,3.82e-24,29;UBERON:0001893,3.82e-24,29;UBERON:0010371,6.14e-22,73;UBERON:0003080,4.69e-20,40;UBERON:0002780,5.15e-19,39;UBERON:0001890,5.15e-19,39;UBERON:0006240,5.15e-19,39;UBERON:0000956,1.81e-16,21;UBERON:0001869,1.81e-16,21;UBERON:0000203,1.81e-16,21;UBERON:0003056,1.26e-15,49;UBERON:0003076,1.34e-14,12;UBERON:0003057,1.34e-14,12;UBERON:0010314,1.43e-13,92;UBERON:0002619,3.99e-13,17;UBERON:0002021,1.98e-11,10;UBERON:0000411,1.98e-11,10;UBERON:0001950,1.98e-11,10;UBERON:0002420,7.88e-09,8;UBERON:0007245,7.88e-09,8;UBERON:0010009,7.88e-09,8;UBERON:0010011,7.88e-09,8;UBERON:0000454,7.88e-09,8;UBERON:0002240,2.17e-08,6;UBERON:0005174,2.17e-08,6;UBERON:0001137,2.17e-08,6;UBERON:0000025,6.70e-08,114;UBERON:0004733,9.86e-08,6;UBERON:0004732,9.86e-08,6;UBERON:0002028,9.86e-08,6;UBERON:0007277,9.86e-08,6;UBERON:0001948,3.75e-07,5;UBERON:0002315,3.75e-07,5|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.65389611359628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.34717403304412,9.81113203712009,12.9614847813338,10.6936444490856,2.65974201088189,2.87505128729943,0,0,0,0,0,0,3.43937983461316,8.46385566835253,6.33831403506179,0,0,0,0,0,2.09720077362883,5.76327457982332,3.52544681848824,5.53524347159932,4.83747411108179,92.8365699312362,73.9909612187905,1.71487118900936,0.958454710182364,0,57.2602581196821,56.8208654479085,51.3045821075853,1.97829431595291,3.56801810049398,2.6045668527838,76.4961417263784,38.8306200921859,58.3689306507415,47.1405736757868,50.2572033220833,11.5567656411686,0.075726193333184,0,0,0,0,0,0,0.448026887097336,1.68533304158102,0,0,0,0.14084341977668,0,0,0,0,0.253359865475099,0,0.5709193985953,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,42.7459963636859,47.9632958602812,0,0,0,0,44.1882386244227,37.5150494311274,8.04187853522332,31.8098505951866,43.7273432034865,51.5314350507709,44.2918648174978,0,0,0,0.210441855886474,0,0,0,0,0,0,0.281105173679186,1.81092359517311,0,0,0,0,0,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0.116765342367169,0,0,0,0,0,0,23.3421842906181,8.95270127699774,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.45882136509518,0,95.3670504527484,84.3924143463863,0,0.25247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| ||
|EntrezGene=11676 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENSMUST00000128032_5end | |||
|description=CAGE_peak_4_at_Aldoc_5end | |||
|id=chr11:78137805..78137897,+ | |||
|ontology_enrichment_celltype=CL:0000221!1.06e-17!44;CL:0000133!1.06e-17!44;CL:0002319!1.56e-17!43;CL:0000117!2.15e-16!23;CL:0000337!2.15e-16!23;CL:0000055!2.96e-13!50;CL:0000540!4.40e-13!33;CL:0000047!4.40e-13!33;CL:0000031!4.40e-13!33;CL:0000404!4.40e-13!33;CL:0000393!1.29e-09!39;CL:0000211!1.29e-09!39;CL:0002321!1.40e-07!70;CL:0000220!1.40e-07!70 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,5.12e-19,23;CL:0000337,5.12e-19,23;CL:0002319,9.40e-16,43;CL:0000221,3.51e-15,44;CL:0000133,3.51e-15,44;CL:0000540,3.90e-11,33;CL:0000047,3.90e-11,33;CL:0000031,3.90e-11,33;CL:0000404,3.90e-11,33;CL:0000393,1.97e-08,39;CL:0000211,1.97e-08,39;CL:0002453,1.16e-07,8 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!3.85e-35!73;UBERON:0005743!3.85e-35!73;UBERON:0000073!1.58e-34!75;UBERON:0001016!1.58e-34!75;UBERON:0001049!6.03e-29!52;UBERON:0005068!6.03e-29!52;UBERON:0006241!6.03e-29!52;UBERON:0007135!6.03e-29!52;UBERON:0000955!6.73e-27!50;UBERON:0006238!6.73e-27!50;UBERON:0002616!4.30e-26!49;UBERON:0002020!3.54e-25!34;UBERON:0004121!4.26e-24!102;UBERON:0000924!4.26e-24!102;UBERON:0006601!4.26e-24!102;UBERON:0000033!3.11e-22!63;UBERON:0002346!1.65e-20!71;UBERON:0003075!1.65e-20!71;UBERON:0007284!1.65e-20!71;UBERON:0002791!1.90e-20!29;UBERON:0003528!1.90e-20!29;UBERON:0001893!1.90e-20!29;UBERON:0003080!3.97e-18!40;UBERON:0002780!2.82e-17!39;UBERON:0001890!2.82e-17!39;UBERON:0006240!2.82e-17!39;UBERON:0003056!4.93e-15!49;UBERON:0000956!2.37e-14!21;UBERON:0001869!2.37e-14!21;UBERON:0000203!2.37e-14!21;UBERON:0003076!7.70e-12!12;UBERON:0003057!7.70e-12!12;UBERON:0002619!1.07e-11!17;UBERON:0007811!1.26e-11!86;UBERON:0000153!8.35e-10!94;UBERON:0002021!2.42e-09!10;UBERON:0000411!2.42e-09!10;UBERON:0001950!2.42e-09!10;UBERON:0002420!2.75e-07!8;UBERON:0007245!2.75e-07!8;UBERON:0010009!2.75e-07!8;UBERON:0010011!2.75e-07!8;UBERON:0000454!2.75e-07!8;UBERON:0002298!3.90e-07!6;UBERON:0002240!6.11e-07!6;UBERON:0005174!6.11e-07!6;UBERON:0001137!6.11e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.10e-36,73;UBERON:0000073,7.01e-36,54;UBERON:0001016,8.54e-35,75;UBERON:0001049,2.07e-33,52;UBERON:0005068,2.07e-33,52;UBERON:0006241,2.07e-33,52;UBERON:0007135,2.07e-33,52;UBERON:0002020,4.24e-30,34;UBERON:0000955,2.95e-27,47;UBERON:0006238,2.95e-27,47;UBERON:0002616,2.76e-26,46;UBERON:0004121,4.34e-26,95;UBERON:0000924,4.34e-26,95;UBERON:0006601,4.34e-26,95;UBERON:0002346,1.08e-25,64;UBERON:0003075,1.08e-25,64;UBERON:0007284,1.08e-25,64;UBERON:0003528,3.82e-24,29;UBERON:0002791,3.82e-24,29;UBERON:0001893,3.82e-24,29;UBERON:0010371,6.14e-22,73;UBERON:0003080,4.69e-20,40;UBERON:0002780,5.15e-19,39;UBERON:0001890,5.15e-19,39;UBERON:0006240,5.15e-19,39;UBERON:0000956,1.81e-16,21;UBERON:0001869,1.81e-16,21;UBERON:0000203,1.81e-16,21;UBERON:0003056,1.26e-15,49;UBERON:0003076,1.34e-14,12;UBERON:0003057,1.34e-14,12;UBERON:0010314,1.43e-13,92;UBERON:0002619,3.99e-13,17;UBERON:0002021,1.98e-11,10;UBERON:0000411,1.98e-11,10;UBERON:0001950,1.98e-11,10;UBERON:0002420,7.88e-09,8;UBERON:0007245,7.88e-09,8;UBERON:0010009,7.88e-09,8;UBERON:0010011,7.88e-09,8;UBERON:0000454,7.88e-09,8;UBERON:0002240,2.17e-08,6;UBERON:0005174,2.17e-08,6;UBERON:0001137,2.17e-08,6;UBERON:0000025,6.70e-08,114;UBERON:0004733,9.86e-08,6;UBERON:0004732,9.86e-08,6;UBERON:0002028,9.86e-08,6;UBERON:0007277,9.86e-08,6;UBERON:0001948,3.75e-07,5;UBERON:0002315,3.75e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.65389611359628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.34717403304412,9.81113203712009,12.9614847813338,10.6936444490856,2.65974201088189,2.87505128729943,0,0,0,0,0,0,3.43937983461316,8.46385566835253,6.33831403506179,0,0,0,0,0,2.09720077362883,5.76327457982332,3.52544681848824,5.53524347159932,4.83747411108179,92.8365699312362,73.9909612187905,1.71487118900936,0.958454710182364,0,57.2602581196821,56.8208654479085,51.3045821075853,1.97829431595291,3.56801810049398,2.6045668527838,76.4961417263784,38.8306200921859,58.3689306507415,47.1405736757868,50.2572033220833,11.5567656411686,0.075726193333184,0,0,0,0,0,0,0.448026887097336,1.68533304158102,0,0,0,0.14084341977668,0,0,0,0,0.253359865475099,0,0.5709193985953,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,42.7459963636859,47.9632958602812,0,0,0,0,44.1882386244227,37.5150494311274,8.04187853522332,31.8098505951866,43.7273432034865,51.5314350507709,44.2918648174978,0,0,0,0.210441855886474,0,0,0,0,0,0,0.281105173679186,1.81092359517311,0,0,0,0,0,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0.116765342367169,0,0,0,0,0,0,23.3421842906181,8.95270127699774,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.45882136509518,0,95.3670504527484,84.3924143463863,0,0.252470927204373,0,0.390438744296638,0.215423397732799,0,0,0,0.404810701674894,0.292255857911312,0.790575555893047,17.9939937196212,0.425820255624806,0.178065603667255,0,0.824850614862677,0,0,0,0,0,0,0,0.363533729477506,0,0,0,0,0,0,0,0,0,0,0.329098041204242,0.913394847343798,0,0,0,0,0,0,0,0,0,81.2162822806032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0,0,0,0,41.2268845110459,37.2863441570813,37.8111038870002,37.6358469332676,32.8839609489908,36.2589070747056,35.1011700120539,34.2244114450408,23.1102628581944,42.4563455636492,0,0,0.341467211508268,0.729320151204882,0.838452650511929,0.735374033800057,2.22246727801615,0.412070114477788,2.88827288632634,2.52697211763797,1.52087579934144,1.50901073108861,1.591905626988,1.47257850531199,1.60819313075717,0.952587382566147,1.15884325944855,1.15745532278223,0.824171801606613,1.91358596174717,2.40008476669791,1.06485483695602,1.43061713968393,1.45346416632329,1.78807822789128,1.60767754994185,1.46342378298218,1.8414879800649,1.90125759384206,0.561142271657738,1.30498519936592,1.57607171800902,1.63692417267876,1.85924209423159,0.771626443924566,2.24829520144151,1.63752125911786,2.14871054048298,1.53030665655075,1.32354851471709,1.39120701372253 | |||
|short_description=p4@Aldoc | |||
}} |
Revision as of 21:02, 12 September 2013
Short description: | p4@Aldoc |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Aldoc_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_ENSMUST00000128032_5end |
EntrezGene: | Aldoc |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 5.12e-19 | 23 |
neuroblast (sensu Vertebrata) | 5.12e-19 | 23 |
neural cell | 9.40e-16 | 43 |
ectodermal cell | 3.51e-15 | 44 |
neurectodermal cell | 3.51e-15 | 44 |
neuron | 3.90e-11 | 33 |
neuronal stem cell | 3.90e-11 | 33 |
neuroblast | 3.90e-11 | 33 |
electrically signaling cell | 3.90e-11 | 33 |
electrically responsive cell | 1.97e-08 | 39 |
electrically active cell | 1.97e-08 | 39 |
oligodendrocyte precursor cell | 1.16e-07 | 8 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.