FFCP PHASE1:Hg19::chr3:39323155..39323219,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=1524|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=2558|TSSclassifier=W|UniProt=P49238|association_with_transcript=6bp_to_ENST00000358309,NM_001171174_5end|description=CAGE_peak_2_at_CX3CR1_5end|id=chr3:39323155..39323219,-|ontology_enrichment_celltype=CL:0000738!4.64e-20!140;CL:0000037!4.11e-16!172;CL:0000566!4.11e-16!172;CL:0002032!3.76e-14!165;CL:0000837!3.76e-14!165;CL:0002087!3.78e-14!119;CL:0000988!5.20e-14!182;CL:0000625!1.73e-12!11;CL:0002057!2.63e-12!42;CL:0002031!3.24e-12!124;CL:0000766!8.20e-12!76;CL:0002009!6.25e-11!65;CL:0000860!6.43e-11!45;CL:0000763!1.32e-10!112;CL:0000049!1.32e-10!112;CL:0002393!2.51e-10!9;CL:0002397!2.51e-10!9;CL:0002194!1.14e-09!63;CL:0000576!1.14e-09!63;CL:0000040!1.14e-09!63;CL:0000559!1.14e-09!63;CL:0000791!1.29e-09!18;CL:0000789!1.29e-09!18;CL:0002420!1.29e-09!18;CL:0002419!1.29e-09!18;CL:0000790!1.29e-09!18;CL:0000557!3.65e-09!71;CL:0000839!8.40e-08!70|ontology_enrichment_celltype_v019=CL:0000625;5.74e-18;11!CL:0000791;7.16e-10;18!CL:0000789;7.16e-10;18!CL:0002419;7.16e-10;18!CL:0000094;3.73e-09;8!CL:0000453;3.06e-08;5!CL:0002393;3.51e-07;6!CL:0002397;3.51e-07;6!CL:0000875;6.66e-07;3!CL:0002396;6.66e-07;3|ontology_enrichment_celltype_v019_2=CL:0000625,6.82e-18,11;CL:0000738,1.80e-13,136;CL:0002393,3.65e-12,9;CL:0002397,3.65e-12,9;CL:0000037,1.43e-10,168;CL:0000791,7.89e-10,18;CL:0000789,7.89e-10,18;CL:0002420,7.89e-10,18;CL:0002419,7.89e-10,18;CL:0000790,7.89e-10,18;CL:0000988,2.02e-09,177;CL:0000094,3.14e-09,8;CL:0002032,6.25e-09,161;CL:0000837,6.25e-09,161;CL:0000453,3.63e-08,5;CL:0002087,2.38e-07,115;CL:0000875,6.92e-07,3;CL:0002396,6.92e-07,3|ontology_enrichment_development_v019=CL:0000790;7.16e-10;18!UBERON:0006601;3.29e-09;82|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!2.96e-58!115;UBERON:0001049!1.13e-32!57;UBERON:0005068!1.13e-32!57;UBERON:0006241!1.13e-32!57;UBERON:0007135!1.13e-32!57;UBERON:0002616!4.20e-27!59;UBERON:0002780!5.63e-27!41;UBERON:0001890!5.63e-27!41;UBERON:0006240!5.63e-27!41;UBERON:0003080!4.92e-26!42;UBERON:0000955!1.33e-24!69;UBERON:0006238!1.33e-24!69;UBERON:0001893!1.94e-24!34;UBERON:0001017!3.17e-24!82;UBERON:0002020!5.69e-24!34;UBERON:0003528!5.69e-24!34;UBERON:0005743!1.93e-23!86;UBERON:0002791!2.17e-23!33;UBERON:0001869!3.02e-22!32;UBERON:0003075!4.48e-21!86;UBERON:0007284!4.48e-21!86;UBERON:0002619!5.08e-21!22;UBERON:0000073!1.54e-20!94;UBERON:0001016!1.54e-20!94;UBERON:0002346!2.25e-19!90;UBERON:0001950!3.89e-19!20;UBERON:0000956!1.20e-17!25;UBERON:0000203!1.20e-17!25;UBERON:0003056!3.05e-15!61;UBERON:0002390!8.41e-15!102;UBERON:0003061!8.41e-15!102;UBERON:0002193!1.82e-13!112;UBERON:0000153!3.21e-13!129;UBERON:0007811!3.21e-13!129;UBERON:0000033!1.24e-11!123;UBERON:0000178!9.29e-11!15;UBERON:0000179!9.29e-11!15;UBERON:0000463!9.29e-11!15;UBERON:0001871!6.76e-09!7;UBERON:0004121!2.31e-08!169;UBERON:0002420!7.62e-08!9;UBERON:0007245!7.62e-08!9;UBERON:0010009!7.62e-08!9;UBERON:0010011!7.62e-08!9;UBERON:0000454!7.62e-08!9;UBERON:0003076!7.93e-08!15;UBERON:0003057!7.93e-08!15;UBERON:0000924!8.17e-08!173;UBERON:0006601!8.17e-08!173;UBERON:0002308!8.88e-08!9;UBERON:0000125!8.88e-08!9;UBERON:0002298!3.01e-07!8;UBERON:0002371!4.38e-07!80|ontology_enrichment_uberon_v019=UBERON:0002619;3.05e-28;22!UBERON:0001893;4.70e-27;34!UBERON:0002780;4.06e-26;41!UBERON:0001890;4.06e-26;41!UBERON:0003528;8.81e-26;34!UBERON:0002020;8.81e-26;34!UBERON:0001869;1.02e-25;32!UBERON:0002791;1.17e-25;32!UBERON:0001950;1.82e-25;20!UBERON:0000956;3.19e-24;25!UBERON:0000203;3.19e-24;25!UBERON:0000073;6.45e-24;53!UBERON:0002616;6.45e-24;53!UBERON:0000178;5.68e-16;15!UBERON:0000179;5.68e-16;15!UBERON:0000463;5.68e-16;15!UBERON:0001017;5.49e-15;75!UBERON:0000955;2.65e-14;68!UBERON:0001016;1.64e-13;83!UBERON:0007023;9.27e-12;114!UBERON:0002298;1.75e-10;6!UBERON:0002420;6.86e-09;9!UBERON:0007245;6.86e-09;9!UBERON:0010009;6.86e-09;9!UBERON:0010011;6.86e-09;9!UBERON:0000454;6.86e-09;9!UBERON:0000125;7.17e-09;9!UBERON:0002308;7.17e-09;9!UBERON:0000349;8.05e-09;5!UBERON:0004732;8.65e-09;13!UBERON:0001872;1.29e-08;5!UBERON:0001871;1.71e-08;6!UBERON:0002021;2.15e-08;5!UBERON:0004733;8.09e-08;12!UBERON:0002028;8.09e-08;12|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.12e-45,56;UBERON:0005068,1.12e-45,56;UBERON:0006241,1.12e-45,56;UBERON:0007135,1.12e-45,56;UBERON:0007023,1.07e-43,114;UBERON:0000073,2.75e-41,53;UBERON:0002616,2.75e-41,53;UBERON:0001017,2.03e-35,81;UBERON:0002780,8.30e-35,41;UBERON:0001890,8.30e-35,41;UBERON:0003080,8.30e-35,41;UBERON:0006240,8.30e-35,41;UBERON:0000955,1.28e-34,68;UBERON:0006238,1.28e-34,68;UBERON:0001893,1.66e-32,34;UBERON:0001016,6.55e-32,89;UBERON:0003528,7.70e-32,34;UBERON:0002020,7.70e-32,34;UBERON:0003075,5.62e-30,82;UBERON:0007284,5.62e-30,82;UBERON:0001869,2.70e-29,32;UBERON:0002791,2.96e-29,32;UBERON:0002619,2.24e-28,22;UBERON:0002346,5.90e-28,86;UBERON:0001950,1.44e-25,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=1524 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2558 | |||
|TSSclassifier=W | |||
|UniProt=P49238 | |||
|association_with_transcript=6bp_to_ENST00000358309,NM_001171174_5end | |||
|description=CAGE_peak_2_at_CX3CR1_5end | |||
|id=chr3:39323155..39323219,- | |||
|ontology_enrichment_celltype=CL:0000738!4.64e-20!140;CL:0000037!4.11e-16!172;CL:0000566!4.11e-16!172;CL:0002032!3.76e-14!165;CL:0000837!3.76e-14!165;CL:0002087!3.78e-14!119;CL:0000988!5.20e-14!182;CL:0000625!1.73e-12!11;CL:0002057!2.63e-12!42;CL:0002031!3.24e-12!124;CL:0000766!8.20e-12!76;CL:0002009!6.25e-11!65;CL:0000860!6.43e-11!45;CL:0000763!1.32e-10!112;CL:0000049!1.32e-10!112;CL:0002393!2.51e-10!9;CL:0002397!2.51e-10!9;CL:0002194!1.14e-09!63;CL:0000576!1.14e-09!63;CL:0000040!1.14e-09!63;CL:0000559!1.14e-09!63;CL:0000791!1.29e-09!18;CL:0000789!1.29e-09!18;CL:0002420!1.29e-09!18;CL:0002419!1.29e-09!18;CL:0000790!1.29e-09!18;CL:0000557!3.65e-09!71;CL:0000839!8.40e-08!70 | |||
|ontology_enrichment_celltype_v019=CL:0000625;5.74e-18;11!CL:0000791;7.16e-10;18!CL:0000789;7.16e-10;18!CL:0002419;7.16e-10;18!CL:0000094;3.73e-09;8!CL:0000453;3.06e-08;5!CL:0002393;3.51e-07;6!CL:0002397;3.51e-07;6!CL:0000875;6.66e-07;3!CL:0002396;6.66e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000625,6.82e-18,11;CL:0000738,1.80e-13,136;CL:0002393,3.65e-12,9;CL:0002397,3.65e-12,9;CL:0000037,1.43e-10,168;CL:0000791,7.89e-10,18;CL:0000789,7.89e-10,18;CL:0002420,7.89e-10,18;CL:0002419,7.89e-10,18;CL:0000790,7.89e-10,18;CL:0000988,2.02e-09,177;CL:0000094,3.14e-09,8;CL:0002032,6.25e-09,161;CL:0000837,6.25e-09,161;CL:0000453,3.63e-08,5;CL:0002087,2.38e-07,115;CL:0000875,6.92e-07,3;CL:0002396,6.92e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000790;7.16e-10;18!UBERON:0006601;3.29e-09;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.96e-58!115;UBERON:0001049!1.13e-32!57;UBERON:0005068!1.13e-32!57;UBERON:0006241!1.13e-32!57;UBERON:0007135!1.13e-32!57;UBERON:0002616!4.20e-27!59;UBERON:0002780!5.63e-27!41;UBERON:0001890!5.63e-27!41;UBERON:0006240!5.63e-27!41;UBERON:0003080!4.92e-26!42;UBERON:0000955!1.33e-24!69;UBERON:0006238!1.33e-24!69;UBERON:0001893!1.94e-24!34;UBERON:0001017!3.17e-24!82;UBERON:0002020!5.69e-24!34;UBERON:0003528!5.69e-24!34;UBERON:0005743!1.93e-23!86;UBERON:0002791!2.17e-23!33;UBERON:0001869!3.02e-22!32;UBERON:0003075!4.48e-21!86;UBERON:0007284!4.48e-21!86;UBERON:0002619!5.08e-21!22;UBERON:0000073!1.54e-20!94;UBERON:0001016!1.54e-20!94;UBERON:0002346!2.25e-19!90;UBERON:0001950!3.89e-19!20;UBERON:0000956!1.20e-17!25;UBERON:0000203!1.20e-17!25;UBERON:0003056!3.05e-15!61;UBERON:0002390!8.41e-15!102;UBERON:0003061!8.41e-15!102;UBERON:0002193!1.82e-13!112;UBERON:0000153!3.21e-13!129;UBERON:0007811!3.21e-13!129;UBERON:0000033!1.24e-11!123;UBERON:0000178!9.29e-11!15;UBERON:0000179!9.29e-11!15;UBERON:0000463!9.29e-11!15;UBERON:0001871!6.76e-09!7;UBERON:0004121!2.31e-08!169;UBERON:0002420!7.62e-08!9;UBERON:0007245!7.62e-08!9;UBERON:0010009!7.62e-08!9;UBERON:0010011!7.62e-08!9;UBERON:0000454!7.62e-08!9;UBERON:0003076!7.93e-08!15;UBERON:0003057!7.93e-08!15;UBERON:0000924!8.17e-08!173;UBERON:0006601!8.17e-08!173;UBERON:0002308!8.88e-08!9;UBERON:0000125!8.88e-08!9;UBERON:0002298!3.01e-07!8;UBERON:0002371!4.38e-07!80 | |||
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|short_description=p2@CX3CR1 | |||
}} |
Revision as of 00:03, 13 September 2013
Short description: | p2@CX3CR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_CX3CR1_5end |
Coexpression cluster: | NA |
Association with transcript: | 6bp_to_ENST00000358309, NM_001171174_5end |
EntrezGene: | CX3CR1 |
HGNC: | 2558 |
UniProt: | P49238 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD8-positive, alpha-beta T cell | 6.82e-18 | 11 |
leukocyte | 1.80e-13 | 136 |
intermediate monocyte | 3.65e-12 | 9 |
CD14-positive, CD16-positive monocyte | 3.65e-12 | 9 |
hematopoietic stem cell | 1.43e-10 | 168 |
mature alpha-beta T cell | 7.89e-10 | 18 |
alpha-beta T cell | 7.89e-10 | 18 |
immature T cell | 7.89e-10 | 18 |
mature T cell | 7.89e-10 | 18 |
immature alpha-beta T cell | 7.89e-10 | 18 |
hematopoietic cell | 2.02e-09 | 177 |
granulocyte | 3.14e-09 | 8 |
hematopoietic oligopotent progenitor cell | 6.25e-09 | 161 |
hematopoietic multipotent progenitor cell | 6.25e-09 | 161 |
Langerhans cell | 3.63e-08 | 5 |
nongranular leukocyte | 2.38e-07 | 115 |
non-classical monocyte | 6.92e-07 | 3 |
CD14-low, CD16-positive monocyte | 6.92e-07 | 3 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.