FFCP PHASE1:Mm9::chr18:82753500..82753517,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=17196|HGNC=|MCL_coexpression_id=270|UniProt=|association_with_transcript=-285bp_to_uc012bfn.1_5end|description=CAGE_peak_12_at_Mbp_5end|id=chr18:82753500..82753517,+|ontology_enrichment_celltype=CL:0002614!4.26e-07!3;CL:0002610!6.06e-07!3|ontology_enrichment_celltype_v019_2=CL:0002614,2.85e-11,3;CL:0002610,5.25e-11,3;CL:0000117,1.30e-10,23;CL:0000337,1.30e-10,23;CL:0002611,7.96e-08,2;CL:0002319,2.03e-07,43;CL:0000221,3.33e-07,44;CL:0000133,3.33e-07,44;CL:0000540,6.32e-07,33;CL:0000047,6.32e-07,33;CL:0000031,6.32e-07,33;CL:0000404,6.32e-07,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!4.93e-23!75;UBERON:0001016!4.93e-23!75;UBERON:0004121!2.22e-21!102;UBERON:0000924!2.22e-21!102;UBERON:0006601!2.22e-21!102;UBERON:0000955!2.57e-21!50;UBERON:0006238!2.57e-21!50;UBERON:0001017!8.01e-21!73;UBERON:0005743!8.01e-21!73;UBERON:0001049!2.30e-20!52;UBERON:0005068!2.30e-20!52;UBERON:0006241!2.30e-20!52;UBERON:0007135!2.30e-20!52;UBERON:0002616!3.50e-20!49;UBERON:0000033!1.57e-19!63;UBERON:0002346!1.91e-16!71;UBERON:0003075!1.91e-16!71;UBERON:0007284!1.91e-16!71;UBERON:0002020!8.54e-14!34;UBERON:0002021!2.11e-13!10;UBERON:0000411!2.11e-13!10;UBERON:0001950!2.11e-13!10;UBERON:0007811!3.99e-13!86;UBERON:0003080!3.23e-12!40;UBERON:0002298!4.53e-12!6;UBERON:0000153!2.55e-11!94;UBERON:0003056!2.69e-11!49;UBERON:0002780!3.05e-11!39;UBERON:0001890!3.05e-11!39;UBERON:0006240!3.05e-11!39;UBERON:0002791!3.88e-11!29;UBERON:0003528!3.88e-11!29;UBERON:0001893!3.88e-11!29;UBERON:0003076!1.08e-09!12;UBERON:0003057!1.08e-09!12;UBERON:0002619!8.09e-09!17;UBERON:0002950!2.18e-08!4;UBERON:0001891!2.18e-08!4;UBERON:0009616!2.18e-08!4;UBERON:0000956!3.23e-08!21;UBERON:0001869!3.23e-08!21;UBERON:0000203!3.23e-08!21;UBERON:0000025!2.82e-07!114;UBERON:0002038!4.26e-07!3;UBERON:0002308!4.26e-07!3;UBERON:0009663!4.26e-07!3;UBERON:0009661!4.26e-07!3;UBERON:0006331!4.26e-07!3;UBERON:0000125!4.26e-07!3;UBERON:0004111!5.49e-07!122;UBERON:0004684!6.06e-07!3;UBERON:0002275!6.06e-07!3|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.15e-33,54;UBERON:0001016,1.76e-29,75;UBERON:0001049,1.10e-28,52;UBERON:0005068,1.10e-28,52;UBERON:0006241,1.10e-28,52;UBERON:0007135,1.10e-28,52;UBERON:0001017,4.26e-28,73;UBERON:0002346,1.72e-22,64;UBERON:0003075,1.72e-22,64;UBERON:0007284,1.72e-22,64;UBERON:0004121,2.70e-22,95;UBERON:0000924,2.70e-22,95;UBERON:0006601,2.70e-22,95;UBERON:0002616,2.00e-21,46;UBERON:0000955,6.89e-21,47;UBERON:0006238,6.89e-21,47;UBERON:0002020,1.10e-20,34;UBERON:0010371,3.55e-19,73;UBERON:0003076,7.52e-17,12;UBERON:0003057,7.52e-17,12;UBERON:0003528,8.35e-16,29;UBERON:0002791,8.35e-16,29;UBERON:0001893,8.35e-16,29;UBERON:0002780,2.81e-15,39;UBERON:0001890,2.81e-15,39;UBERON:0006240,2.81e-15,39;UBERON:0003080,8.04e-15,40;UBERON:0010314,2.68e-14,92;UBERON:0002021,4.25e-14,10;UBERON:0000411,4.25e-14,10;UBERON:0001950,4.25e-14,10;UBERON:0003056,1.50e-11,49;UBERON:0002038,2.85e-11,3;UBERON:0009663,2.85e-11,3;UBERON:0009661,2.85e-11,3;UBERON:0000125,2.85e-11,3;UBERON:0002308,2.85e-11,3;UBERON:0004684,5.25e-11,3;UBERON:0002275,5.25e-11,3;UBERON:0000025,1.13e-10,114;UBERON:0002619,2.91e-10,17;UBERON:0000956,3.51e-10,21;UBERON:0001869,3.51e-10,21;UBERON:0000203,3.51e-10,21;UBERON:0004111,1.12e-09,122;UBERON:0002240,3.43e-09,6;UBERON:0005174,3.43e-09,6;UBERON:0001137,3.43e-09,6;UBERON:0004733,3.61e-09,6;UBERON:0004732,3.61e-09,6;UBERON:0002028,3.61e-09,6;UBERON:0007277,3.61e-09,6;UBERON:0002950,1.50e-08,4;UBERON:0001891,1.50e-08,4;UBERON:0009616,1.50e-08,4;UBERON:0010286,1.50e-08,4;UBERON:0011216,1.97e-08,194;UBERON:0001896,4.30e-08,2;UBERON:0002298,4.30e-08,2;UBERON:0005290,4.30e-08,2;UBERON:0010096,4.30e-08,2;UBERON:0002256,7.96e-08,2;UBERON:0002420,4.38e-07,8;UBERON:0007245,4.38e-07,8;UBERON:0010009,4.38e-07,8;UBERON:0010011,4.38e-07,8;UBERON:0000454,4.38e-07,8|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.898800331555214,2.68952813725088,0,0,0,4.28476476605705,5.96345060569357,0,0,0,5.50579404996943,5.36286819957788,6.29786786350598,0,0,0,9.21303896704557,5.6276261003168,5.80633341551878,0,1.42371680799103,0,1.28734528666413,0.226714680320357,0,0,0,0,0,0,0,0,0,0,0.563373679106722,0,0,0,0,0,0,0.11418387971906,0,0,0.173485326766136,0,0,0,0,0,0,0,0,0.161766849947409,0,0,0,1.46390398505774,3.97948742945565,0,0,0,0,0.449371918214468,3.20250421973039,0,1.04294592115366,0.255715457330331,5.194701113989,3.40706652442291,0,0,0,0,0,0,0,0,0.0680364991513279,0,0,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146199987425332,0,0,1.26173969138476,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0,5.77982123956051,8.55645312123083,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0,0,0.164140899745061,0,7.78786268444141,0,0,0,0,0,0,0,0,0.138199973804424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147689527174577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6942555278512,1.84130094602871,1.71868654031819,1.3748254587495,2.05524755931193,0,1.35004500046361,0.900642406448441,0.453142408984205,1.03552062350364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214871054048298,0.191288332068843,0,0.231867835620421|short_description=p12@Mbp}} | ||
|EntrezGene=17196 | |||
|HGNC= | |||
|MCL_coexpression_id=270 | |||
|UniProt= | |||
|association_with_transcript=-285bp_to_uc012bfn.1_5end | |||
|description=CAGE_peak_12_at_Mbp_5end | |||
|id=chr18:82753500..82753517,+ | |||
|ontology_enrichment_celltype=CL:0002614!4.26e-07!3;CL:0002610!6.06e-07!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002614,2.85e-11,3;CL:0002610,5.25e-11,3;CL:0000117,1.30e-10,23;CL:0000337,1.30e-10,23;CL:0002611,7.96e-08,2;CL:0002319,2.03e-07,43;CL:0000221,3.33e-07,44;CL:0000133,3.33e-07,44;CL:0000540,6.32e-07,33;CL:0000047,6.32e-07,33;CL:0000031,6.32e-07,33;CL:0000404,6.32e-07,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!4.93e-23!75;UBERON:0001016!4.93e-23!75;UBERON:0004121!2.22e-21!102;UBERON:0000924!2.22e-21!102;UBERON:0006601!2.22e-21!102;UBERON:0000955!2.57e-21!50;UBERON:0006238!2.57e-21!50;UBERON:0001017!8.01e-21!73;UBERON:0005743!8.01e-21!73;UBERON:0001049!2.30e-20!52;UBERON:0005068!2.30e-20!52;UBERON:0006241!2.30e-20!52;UBERON:0007135!2.30e-20!52;UBERON:0002616!3.50e-20!49;UBERON:0000033!1.57e-19!63;UBERON:0002346!1.91e-16!71;UBERON:0003075!1.91e-16!71;UBERON:0007284!1.91e-16!71;UBERON:0002020!8.54e-14!34;UBERON:0002021!2.11e-13!10;UBERON:0000411!2.11e-13!10;UBERON:0001950!2.11e-13!10;UBERON:0007811!3.99e-13!86;UBERON:0003080!3.23e-12!40;UBERON:0002298!4.53e-12!6;UBERON:0000153!2.55e-11!94;UBERON:0003056!2.69e-11!49;UBERON:0002780!3.05e-11!39;UBERON:0001890!3.05e-11!39;UBERON:0006240!3.05e-11!39;UBERON:0002791!3.88e-11!29;UBERON:0003528!3.88e-11!29;UBERON:0001893!3.88e-11!29;UBERON:0003076!1.08e-09!12;UBERON:0003057!1.08e-09!12;UBERON:0002619!8.09e-09!17;UBERON:0002950!2.18e-08!4;UBERON:0001891!2.18e-08!4;UBERON:0009616!2.18e-08!4;UBERON:0000956!3.23e-08!21;UBERON:0001869!3.23e-08!21;UBERON:0000203!3.23e-08!21;UBERON:0000025!2.82e-07!114;UBERON:0002038!4.26e-07!3;UBERON:0002308!4.26e-07!3;UBERON:0009663!4.26e-07!3;UBERON:0009661!4.26e-07!3;UBERON:0006331!4.26e-07!3;UBERON:0000125!4.26e-07!3;UBERON:0004111!5.49e-07!122;UBERON:0004684!6.06e-07!3;UBERON:0002275!6.06e-07!3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.15e-33,54;UBERON:0001016,1.76e-29,75;UBERON:0001049,1.10e-28,52;UBERON:0005068,1.10e-28,52;UBERON:0006241,1.10e-28,52;UBERON:0007135,1.10e-28,52;UBERON:0001017,4.26e-28,73;UBERON:0002346,1.72e-22,64;UBERON:0003075,1.72e-22,64;UBERON:0007284,1.72e-22,64;UBERON:0004121,2.70e-22,95;UBERON:0000924,2.70e-22,95;UBERON:0006601,2.70e-22,95;UBERON:0002616,2.00e-21,46;UBERON:0000955,6.89e-21,47;UBERON:0006238,6.89e-21,47;UBERON:0002020,1.10e-20,34;UBERON:0010371,3.55e-19,73;UBERON:0003076,7.52e-17,12;UBERON:0003057,7.52e-17,12;UBERON:0003528,8.35e-16,29;UBERON:0002791,8.35e-16,29;UBERON:0001893,8.35e-16,29;UBERON:0002780,2.81e-15,39;UBERON:0001890,2.81e-15,39;UBERON:0006240,2.81e-15,39;UBERON:0003080,8.04e-15,40;UBERON:0010314,2.68e-14,92;UBERON:0002021,4.25e-14,10;UBERON:0000411,4.25e-14,10;UBERON:0001950,4.25e-14,10;UBERON:0003056,1.50e-11,49;UBERON:0002038,2.85e-11,3;UBERON:0009663,2.85e-11,3;UBERON:0009661,2.85e-11,3;UBERON:0000125,2.85e-11,3;UBERON:0002308,2.85e-11,3;UBERON:0004684,5.25e-11,3;UBERON:0002275,5.25e-11,3;UBERON:0000025,1.13e-10,114;UBERON:0002619,2.91e-10,17;UBERON:0000956,3.51e-10,21;UBERON:0001869,3.51e-10,21;UBERON:0000203,3.51e-10,21;UBERON:0004111,1.12e-09,122;UBERON:0002240,3.43e-09,6;UBERON:0005174,3.43e-09,6;UBERON:0001137,3.43e-09,6;UBERON:0004733,3.61e-09,6;UBERON:0004732,3.61e-09,6;UBERON:0002028,3.61e-09,6;UBERON:0007277,3.61e-09,6;UBERON:0002950,1.50e-08,4;UBERON:0001891,1.50e-08,4;UBERON:0009616,1.50e-08,4;UBERON:0010286,1.50e-08,4;UBERON:0011216,1.97e-08,194;UBERON:0001896,4.30e-08,2;UBERON:0002298,4.30e-08,2;UBERON:0005290,4.30e-08,2;UBERON:0010096,4.30e-08,2;UBERON:0002256,7.96e-08,2;UBERON:0002420,4.38e-07,8;UBERON:0007245,4.38e-07,8;UBERON:0010009,4.38e-07,8;UBERON:0010011,4.38e-07,8;UBERON:0000454,4.38e-07,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.898800331555214,2.68952813725088,0,0,0,4.28476476605705,5.96345060569357,0,0,0,5.50579404996943,5.36286819957788,6.29786786350598,0,0,0,9.21303896704557,5.6276261003168,5.80633341551878,0,1.42371680799103,0,1.28734528666413,0.226714680320357,0,0,0,0,0,0,0,0,0,0,0.563373679106722,0,0,0,0,0,0,0.11418387971906,0,0,0.173485326766136,0,0,0,0,0,0,0,0,0.161766849947409,0,0,0,1.46390398505774,3.97948742945565,0,0,0,0,0.449371918214468,3.20250421973039,0,1.04294592115366,0.255715457330331,5.194701113989,3.40706652442291,0,0,0,0,0,0,0,0,0.0680364991513279,0,0,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146199987425332,0,0,1.26173969138476,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0,5.77982123956051,8.55645312123083,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0,0,0.164140899745061,0,7.78786268444141,0,0,0,0,0,0,0,0,0.138199973804424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147689527174577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6942555278512,1.84130094602871,1.71868654031819,1.3748254587495,2.05524755931193,0,1.35004500046361,0.900642406448441,0.453142408984205,1.03552062350364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214871054048298,0.191288332068843,0,0.231867835620421 | |||
|short_description=p12@Mbp | |||
}} |
Revision as of 16:52, 13 September 2013
Short description: | p12@Mbp |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_12_at_Mbp_5end |
Coexpression cluster: | MCL_coexpression_mm9:270 |
Association with transcript: | -285bp_to_uc012bfn.1_5end |
EntrezGene: | Mbp |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of the substantia nigra | 2.85e-11 | 3 |
raphe nuclei neuron | 5.25e-11 | 3 |
CNS neuron (sensu Vertebrata) | 1.30e-10 | 23 |
neuroblast (sensu Vertebrata) | 1.30e-10 | 23 |
neuron of the dorsal spinal cord | 7.96e-08 | 2 |
neural cell | 2.03e-07 | 43 |
ectodermal cell | 3.33e-07 | 44 |
neurectodermal cell | 3.33e-07 | 44 |
neuron | 6.32e-07 | 33 |
neuronal stem cell | 6.32e-07 | 33 |
neuroblast | 6.32e-07 | 33 |
electrically signaling cell | 6.32e-07 | 33 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.