FFCP PHASE1:Hg19::chr10:4823096..4823144,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C3021 | |||
|description=CAGE_peak_at_chr10:4823096..4823144,- | |||
|id=chr10:4823096..4823144,- | |||
|ontology_enrichment_celltype=CL:0002139!4.34e-32!24;CL:0000222!5.65e-24!119;CL:0000071!4.47e-23!18;CL:0002546!4.47e-23!18;CL:0000359!6.61e-21!32;CL:0000055!2.71e-20!180;CL:0000115!1.69e-19!35;CL:0000057!4.74e-18!75;CL:0002620!1.08e-16!23;CL:0000213!1.28e-15!57;CL:0000215!1.28e-15!57;CL:0002078!3.12e-15!44;CL:0000192!3.56e-14!42;CL:0000514!3.56e-14!42;CL:1000413!2.47e-13!9;CL:0000220!2.00e-11!246;CL:0002321!3.43e-11!248;CL:0000680!1.25e-10!57;CL:0000056!1.25e-10!57;CL:0000355!1.25e-10!57;CL:0005020!1.27e-10!6;CL:0002138!1.27e-10!6;CL:0005022!1.27e-10!6;CL:0002544!1.04e-09!6;CL:0002539!1.10e-09!10;CL:0000187!1.62e-09!54;CL:0000183!5.80e-09!59;CL:0000076!7.73e-09!62;CL:0000393!6.21e-08!60;CL:0000211!6.21e-08!60;CL:0002494!7.44e-08!16;CL:0000548!9.97e-08!679;CL:0000004!9.97e-08!679;CL:0000255!9.97e-08!679;CL:0000012!1.51e-07!682;CL:1000306!1.76e-07!4;CL:0002547!1.76e-07!4;CL:0002543!7.68e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0002139;1.01e-46;24!CL:0000071;2.16e-31;18!CL:0000359;7.73e-30;32!CL:0000115;2.04e-23;36!CL:0002138;2.91e-17;6!CL:0000192;2.71e-16;43!CL:0002078;2.06e-15;45!CL:1000413;3.33e-14;9!CL:0002539;9.31e-13;10!CL:0000213;5.26e-12;58!CL:0000215;5.26e-12;58!CL:1000306;1.08e-11;4!CL:0002547;1.08e-11;4!CL:0002544;1.97e-11;6!CL:0002543;4.28e-11;6!CL:0002144;6.88e-10;3!CL:0002618;3.68e-09;3!CL:0002592;3.89e-09;3!CL:0002595;1.14e-08;5!CL:0000187;2.36e-07;55!CL:0000393;7.60e-07;61!CL:0000211;7.60e-07;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,1.18e-46,24;CL:0000222,2.70e-34,121;CL:0000359,1.75e-31,32;CL:0000071,2.49e-31,18;CL:0002546,2.49e-31,18;CL:0000115,4.24e-29,36;CL:0002078,4.19e-22,45;CL:0000192,5.72e-22,43;CL:0000514,5.72e-22,43;CL:0000213,2.12e-19,58;CL:0000215,2.12e-19,58;CL:0005020,2.92e-17,6;CL:0002138,2.92e-17,6;CL:0005022,2.92e-17,6;CL:0002321,1.58e-16,250;CL:0000680,1.79e-16,58;CL:0000056,1.79e-16,58;CL:0000355,1.79e-16,58;CL:0000187,5.73e-16,55;CL:1000413,3.63e-14,9;CL:0000393,7.21e-14,61;CL:0000211,7.21e-14,61;CL:0002539,8.75e-13,10;CL:1000306,7.96e-12,4;CL:0002547,7.96e-12,4;CL:0002544,2.02e-11,6;CL:0002543,4.89e-11,6;CL:0002144,6.14e-10,3;CL:0000076,1.05e-09,63;CL:0002592,3.79e-09,3;CL:0002618,4.00e-09,3;CL:0002595,7.26e-09,5 | |||
|ontology_enrichment_development_v019=CL:0002546;2.16e-31;18!CL:0005022;2.91e-17;6!CL:0000514;2.71e-16;43!CL:0000355;1.80e-08;58!CL:0000222;6.05e-08;121 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000055!5.01e-51!69;UBERON:0001981!2.33e-45!60;UBERON:0007500!2.33e-45!60;UBERON:0004537!2.33e-45!60;UBERON:0006965!2.33e-45!60;UBERON:0002049!6.89e-44!79;UBERON:0007798!6.89e-44!79;UBERON:0001637!1.76e-43!42;UBERON:0003509!1.76e-43!42;UBERON:0004572!1.76e-43!42;UBERON:0004872!4.15e-41!84;UBERON:0004535!2.87e-36!110;UBERON:0004573!4.05e-35!33;UBERON:0004571!4.05e-35!33;UBERON:0001009!8.78e-35!113;UBERON:0003914!4.35e-25!118;UBERON:0001986!4.47e-23!18;UBERON:0004638!4.47e-23!18;UBERON:0004852!4.47e-23!18;UBERON:0000947!7.49e-22!21;UBERON:0010191!7.49e-22!21;UBERON:0000487!3.26e-20!22;UBERON:0006914!6.25e-19!25;UBERON:0000490!2.55e-14!138;UBERON:0003915!2.47e-13!9;UBERON:0004700!2.47e-13!9;UBERON:0001917!2.47e-13!9;UBERON:0000914!5.18e-13!83;UBERON:0002329!5.18e-13!83;UBERON:0003077!5.18e-13!83;UBERON:0003059!5.18e-13!83;UBERON:0007282!5.18e-13!83;UBERON:0009618!5.18e-13!83;UBERON:0007285!5.18e-13!83;UBERON:0004111!5.93e-13!241;UBERON:0000486!4.29e-12!82;UBERON:0000477!5.35e-12!286;UBERON:0004290!7.88e-12!70;UBERON:0000025!3.47e-10!194;UBERON:0004237!1.10e-09!10;UBERON:0004695!1.10e-09!10;UBERON:0002111!1.10e-09!10;UBERON:0004178!1.10e-09!10;UBERON:0001134!1.81e-09!61;UBERON:0002036!1.81e-09!61;UBERON:0003082!1.81e-09!61;UBERON:0002199!5.72e-09!45;UBERON:0002416!5.72e-09!45;UBERON:0002385!5.99e-09!63;UBERON:0001015!5.99e-09!63;UBERON:0000383!5.99e-09!63;UBERON:0002097!1.14e-08!40;UBERON:0000483!4.49e-08!309;UBERON:0003498!5.77e-08!5;UBERON:0005985!5.77e-08!5;UBERON:0003102!7.02e-08!95;UBERON:0000119!7.89e-08!312;UBERON:0001473!1.13e-07!8;UBERON:0004536!1.13e-07!8;UBERON:0006558!1.13e-07!8;UBERON:0000948!1.25e-07!24;UBERON:0005498!1.25e-07!24;UBERON:0004140!1.25e-07!24;UBERON:0009881!1.25e-07!24;UBERON:0004141!1.25e-07!24;UBERON:0003084!1.25e-07!24;UBERON:0007005!1.25e-07!24;UBERON:0004139!1.25e-07!24;UBERON:0004291!1.25e-07!24;UBERON:0000415!1.76e-07!4;UBERON:0007240!1.76e-07!4;UBERON:0005742!1.76e-07!4;UBERON:0005734!1.76e-07!4;UBERON:0004664!1.76e-07!4;UBERON:0004663!1.76e-07!4;UBERON:0003081!2.47e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;3.13e-45;33!UBERON:0004571;3.13e-45;33!UBERON:0001637;2.96e-44;42!UBERON:0003509;2.96e-44;42!UBERON:0004572;2.96e-44;42!UBERON:0007500;1.40e-36;56!UBERON:0001981;1.40e-36;56!UBERON:0004537;1.40e-36;56!UBERON:0000055;2.17e-36;65!UBERON:0004638;2.16e-31;18!UBERON:0001986;2.16e-31;18!UBERON:0004852;2.16e-31;18!UBERON:0000947;4.22e-30;21!UBERON:0010191;4.22e-30;21!UBERON:0000487;2.37e-28;22!UBERON:0002049;5.34e-27;75!UBERON:0007798;5.34e-27;75!UBERON:0006914;1.95e-24;25!UBERON:0003914;1.32e-21;74!UBERON:0000490;9.71e-18;33!UBERON:0004535;1.77e-14;109!UBERON:0003915;3.33e-14;9!UBERON:0004700;3.33e-14;9!UBERON:0001917;3.33e-14;9!UBERON:0004237;9.31e-13;10!UBERON:0004695;9.31e-13;10!UBERON:0002111;9.31e-13;10!UBERON:0004178;9.31e-13;10!UBERON:0001473;9.57e-13;8!UBERON:0004536;9.57e-13;8!UBERON:0006558;9.57e-13;8!UBERON:0001009;1.40e-12;112!UBERON:0000025;3.71e-12;93!UBERON:0004797;1.08e-11;4!UBERON:0000415;1.08e-11;4!UBERON:0007240;1.08e-11;4!UBERON:0005742;1.08e-11;4!UBERON:0005734;1.08e-11;4!UBERON:0004664;1.08e-11;4!UBERON:0004663;1.08e-11;4!UBERON:0010260;4.25e-10;9!UBERON:0002465;4.93e-10;10!UBERON:0010523;6.88e-10;3!UBERON:0001915;6.88e-10;3!UBERON:0001982;6.88e-10;3!UBERON:0003498;3.89e-09;3!UBERON:0005985;3.89e-09;3!UBERON:0001621;3.89e-09;3!UBERON:0003834;1.14e-08;5!UBERON:0001533;1.14e-08;5!UBERON:0001135;3.86e-08;15!UBERON:0004111;1.03e-07;130!UBERON:0001638;2.81e-07;9!UBERON:0003920;2.81e-07;9!UBERON:0004582;2.81e-07;9!UBERON:0000119;5.16e-07;139 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000055,1.05e-74,68;UBERON:0007500,4.84e-64,59;UBERON:0001981,4.84e-64,59;UBERON:0004537,4.84e-64,59;UBERON:0006965,4.84e-64,59;UBERON:0002049,1.57e-63,78;UBERON:0007798,1.57e-63,78;UBERON:0001637,6.48e-58,42;UBERON:0003509,6.48e-58,42;UBERON:0004572,6.48e-58,42;UBERON:0004872,2.12e-52,83;UBERON:0004573,9.42e-50,33;UBERON:0004571,9.42e-50,33;UBERON:0004535,1.59e-48,109;UBERON:0001009,7.04e-47,112;UBERON:0003914,5.76e-32,117;UBERON:0004638,2.49e-31,18;UBERON:0001986,2.49e-31,18;UBERON:0004852,2.49e-31,18;UBERON:0000947,3.22e-30,21;UBERON:0010191,3.22e-30,21;UBERON:0000487,2.36e-28,22;UBERON:0006914,1.94e-24,25;UBERON:0000490,2.34e-21,148;UBERON:0004111,4.89e-19,240;UBERON:0000025,4.33e-16,192;UBERON:0003081,1.59e-15,203;UBERON:0002329,2.42e-15,71;UBERON:0003059,2.42e-15,71;UBERON:0007282,2.42e-15,71;UBERON:0004290,2.42e-15,71;UBERON:0009618,2.42e-15,71;UBERON:0001134,4.80e-15,62;UBERON:0002036,4.80e-15,62;UBERON:0003082,4.80e-15,62;UBERON:0003077,4.82e-15,72;UBERON:0007285,4.82e-15,72;UBERON:0007524,9.42e-15,73;UBERON:0002385,2.13e-14,64;UBERON:0001015,2.13e-14,64;UBERON:0000383,2.13e-14,64;UBERON:0003915,3.63e-14,9;UBERON:0004700,3.63e-14,9;UBERON:0001917,3.63e-14,9;UBERON:0000486,1.85e-13,83;UBERON:0007503,2.05e-13,78;UBERON:0004237,8.75e-13,10;UBERON:0004695,8.75e-13,10;UBERON:0002111,8.75e-13,10;UBERON:0004178,8.75e-13,10;UBERON:0001473,9.60e-13,8;UBERON:0004536,9.60e-13,8;UBERON:0006558,9.60e-13,8;UBERON:0000415,7.96e-12,4;UBERON:0007240,7.96e-12,4;UBERON:0005742,7.96e-12,4;UBERON:0005734,7.96e-12,4;UBERON:0004664,7.96e-12,4;UBERON:0004663,7.96e-12,4;UBERON:0000483,1.85e-10,306;UBERON:0000119,3.04e-10,309;UBERON:0010260,4.29e-10,9;UBERON:0002465,4.94e-10,10;UBERON:0010523,6.14e-10,3;UBERON:0001915,6.14e-10,3;UBERON:0001982,6.14e-10,3;UBERON:0000926,3.37e-09,315;UBERON:0004120,3.37e-09,315;UBERON:0006603,3.37e-09,315;UBERON:0001621,3.79e-09,3;UBERON:0003498,6.00e-09,5;UBERON:0005985,6.00e-09,5;UBERON:0003834,7.26e-09,5;UBERON:0001533,7.26e-09,5;UBERON:0001135,3.71e-08,15;UBERON:0005256,4.12e-08,122;UBERON:0001638,3.06e-07,9;UBERON:0003920,3.06e-07,9;UBERON:0004582,3.06e-07,9;UBERON:0004797,9.77e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.03395087871065,3.01347264011988,2.19093027116212,2.43966399395253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0,0,0,0.0945348171640679,0,0,0,0,0,0,0,0,0,0,0,6.36039703573456,2.58070378531837,5.55424802572151,1.13061588384802,1.25849830862972,0.275118041940067,6.47884396264113,5.94358546089456,2.13459757612026,7.69857409358742,6.8480983908555,6.84244895146661,10.9827925896676,2.20597848207521,0.81014194788176,7.76907636071494,1.34717623575702,5.18012810223282,1.53316637465883,0,1.09921046358244,0,0,0,0,3.41902381494365,26.3494269818305,4.58938593198102,1.77334191099179,0,1.06748995729705,0.74000264525148,0,0.67355336034844,0.817309515567294,0,0,0,0,0.570471821544449,0.298897361103602,4.69737994575059,0.809364721840658,2.10676210053373,0.204154171254893,0.245668634623536,0,0,0,0,0,0.673344455816265,0.375355559615893,0.277064115484183,0,0,0,0.226864366320042,11.1221574127094,0.427114777637135,0,1.80054657650641,0.206105058476878,0.772921620136887,0.18611685633159,9.11392194102838,2.04617710838517,0.757301322732344,0.276149695926898,0,6.74518225781567,4.03008392910561,0.169560592310488,0,1.36373060295417,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185176890317059,0,0,0,0,0,14.8697441193906,3.24089858803628,4.56609965363036,0,0,0,0,0,0,1.51183915378974,3.40260233381728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0.579125226670317,0,1.43248770591916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.462629081407967,0.177561725313127,0.492762936082855,1.03850885836724,0.464841513839837,0,0,0,0,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6068392984416,0,0,0,0,0,0,0,0,0,0,0,0,0,2.20368642781448,0,5.5446044431696,2.66153015158511,0.869932992075073,0.37064843820784,2.00374841438788,0,0,0,0,0,2.54562598340749,1.56989728039846,0,0,0,3.63928466831969,3.17020642346017,3.37006764991185,0,2.92456187557541,2.11300293513511,0,0,1.13008116620243,0,1.99031692572366,2.63070531152258,0,0,0,1.8589409885985,1.40847801266121,0,0,1.07001315444375,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0.121360521749513,0,0,0,0,0,0,0,0.890469640183247,0,0,0,0,0,4.09074730008619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.874813840149763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.728341138602278,0,0,0,0,0,0,0,0,0.313932918407225,1.19472429772959,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137041924646751,6.35886757449567,0,0,0,0,0,0,0.114536596165916,0,0,14.4132941255902,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,35.3761127340012,0,0,0,0,0,0,0,0,1.19730191562487,0,0.170388021785422,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.6227077315665,0,0,0,0,0,0.149254802886874,0,0,0,0,0,1.37304041038154,0,0.310874401165561,8.13203324942987,2.07085797312813,0,0.931577741257556,0,0.53168342911599,0,0,0,0.406870733204662,0.363697318405119,0.751873899297419,0.464033759878494,0,0.800055529326307,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0.176689145945881,0,0,0,0,2.43087964941906,0,0,0,0,0,0.491545817507439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0,0,0,2.0710797781803,0,0,0,0,0,0.982631505060581,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.342976018874837,0,0,0,5.89526430027966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0.31020638566432,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150962843566674,0,0,0,0,0,0,0,0,0,0,0,0,0,9.88105640803937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0.162806537221949,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr10:4823096..4823144,- | |||
}} |
Revision as of 01:30, 11 January 2014
Short description: | p@chr10:4823096..4823144, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:4823096..4823144, - |
Coexpression cluster: | C3021_large_Fibroblast_giant_Lymphatic_medulloblastoma_Endothelial_squamous |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data