FFCP PHASE1:Hg19::chr10:33246815..33246830,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3688 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6153 | |||
|TSSclassifier=strong | |||
|UniProt=P05556 | |||
|association_with_transcript=0bp_to_ENST00000396033,NM_133376,uc001iws.3_5end | |||
|coexpression_cluster_id=C2058 | |||
|description=CAGE_peak_4_at_ITGB1_5end | |||
|id=chr10:33246815..33246830,- | |||
|ontology_enrichment_celltype=CL:0000220!6.14e-26!246;CL:0002321!8.96e-26!248;CL:0000222!4.21e-22!119;CL:0000548!1.65e-18!679;CL:0000004!1.65e-18!679;CL:0000255!1.65e-18!679;CL:0000055!2.64e-18!180;CL:0000012!1.77e-17!682;CL:0000066!4.60e-16!254;CL:0000359!5.59e-16!32;CL:0000680!5.41e-15!57;CL:0000056!5.41e-15!57;CL:0000355!5.41e-15!57;CL:0000187!2.92e-14!54;CL:0000192!3.58e-14!42;CL:0000514!3.58e-14!42;CL:0000183!6.33e-14!59;CL:0000393!1.97e-13!60;CL:0000211!1.97e-13!60;CL:0000144!1.72e-12!625;CL:0002371!1.88e-12!591;CL:0000003!2.32e-09!722;CL:0002139!2.59e-09!24;CL:0000057!4.07e-09!75;CL:0000213!1.28e-07!57;CL:0000215!1.28e-07!57;CL:0000071!2.26e-07!18;CL:0002546!2.26e-07!18;CL:0000115!4.86e-07!35 | |||
|ontology_enrichment_celltype_v019=CL:0000359;1.50e-16;32!CL:0000192;1.14e-10;43!CL:0002139;2.98e-10;24!CL:0000071;3.75e-08;18!CL:0000187;1.27e-07;55!CL:0002539;4.94e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,2.25e-22,250;CL:0000222,5.02e-22,121;CL:0000359,1.39e-17,32;CL:0000680,5.27e-15,58;CL:0000056,5.27e-15,58;CL:0000355,5.27e-15,58;CL:0000192,1.14e-14,43;CL:0000514,1.14e-14,43;CL:0000187,3.39e-14,55;CL:0000066,3.25e-13,253;CL:0000393,1.73e-12,61;CL:0000211,1.73e-12,61;CL:0000057,5.51e-11,76;CL:0002139,3.55e-10,24;CL:0000071,5.06e-08,18;CL:0002546,5.06e-08,18;CL:0000115,1.05e-07,36;CL:0000213,1.80e-07,58;CL:0000215,1.80e-07,58;CL:0002539,4.88e-07,10 | |||
|ontology_enrichment_development_v019=CL:0000514;1.14e-10;43!CL:0002546;3.75e-08;18!CL:0000355;8.64e-08;58 | |||
|ontology_enrichment_disease=DOID:2394!2.84e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;5.90e-09;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,5.07e-09,14 | |||
|ontology_enrichment_uberon=UBERON:0003914!4.14e-24!118;UBERON:0002049!1.21e-22!79;UBERON:0007798!1.21e-22!79;UBERON:0004872!6.20e-21!84;UBERON:0001981!2.51e-20!60;UBERON:0007500!2.51e-20!60;UBERON:0004537!2.51e-20!60;UBERON:0006965!2.51e-20!60;UBERON:0000055!3.98e-20!69;UBERON:0001637!4.26e-19!42;UBERON:0003509!4.26e-19!42;UBERON:0004572!4.26e-19!42;UBERON:0002100!9.53e-19!216;UBERON:0000490!1.48e-18!138;UBERON:0005256!3.36e-18!143;UBERON:0004535!2.88e-17!110;UBERON:0001009!1.17e-16!113;UBERON:0004573!2.84e-16!33;UBERON:0004571!2.84e-16!33;UBERON:0000486!6.24e-16!82;UBERON:0000914!1.41e-15!83;UBERON:0002329!1.41e-15!83;UBERON:0003077!1.41e-15!83;UBERON:0003059!1.41e-15!83;UBERON:0007282!1.41e-15!83;UBERON:0009618!1.41e-15!83;UBERON:0007285!1.41e-15!83;UBERON:0003104!3.81e-15!238;UBERON:0009142!3.81e-15!238;UBERON:0004290!4.08e-14!70;UBERON:0001134!7.12e-13!61;UBERON:0002036!7.12e-13!61;UBERON:0003082!7.12e-13!61;UBERON:0000926!2.03e-12!448;UBERON:0004120!2.03e-12!448;UBERON:0006603!2.03e-12!448;UBERON:0002385!3.11e-12!63;UBERON:0001015!3.11e-12!63;UBERON:0000383!3.11e-12!63;UBERON:0000467!1.59e-10!625;UBERON:0000468!2.12e-10!659;UBERON:0000480!2.84e-10!626;UBERON:0000947!7.00e-10!21;UBERON:0010191!7.00e-10!21;UBERON:0000119!1.44e-08!312;UBERON:0000475!1.75e-08!365;UBERON:0000483!4.37e-08!309;UBERON:0000487!9.82e-08!22;UBERON:0000481!1.70e-07!347;UBERON:0000477!2.02e-07!286;UBERON:0001986!2.26e-07!18;UBERON:0004638!2.26e-07!18;UBERON:0004852!2.26e-07!18;UBERON:0003886!7.44e-07!63 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;2.10e-16;33!UBERON:0004571;2.10e-16;33!UBERON:0001637;2.35e-15;42!UBERON:0003509;2.35e-15;42!UBERON:0004572;2.35e-15;42!UBERON:0007500;5.07e-13;56!UBERON:0001981;5.07e-13;56!UBERON:0004537;5.07e-13;56!UBERON:0000055;5.54e-12;65!UBERON:0002049;8.96e-11;75!UBERON:0007798;8.96e-11;75!UBERON:0000947;9.81e-11;21!UBERON:0010191;9.81e-11;21!UBERON:0003914;2.27e-10;74!UBERON:0000487;3.02e-08;22!UBERON:0004638;3.75e-08;18!UBERON:0001986;3.75e-08;18!UBERON:0004852;3.75e-08;18!UBERON:0000490;3.63e-07;33!UBERON:0004237;4.94e-07;10!UBERON:0004695;4.94e-07;10!UBERON:0002111;4.94e-07;10!UBERON:0004178;4.94e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003914,8.06e-25,117;UBERON:0002049,2.07e-23,78;UBERON:0007798,2.07e-23,78;UBERON:0004872,7.48e-22,83;UBERON:0007500,2.70e-21,59;UBERON:0001981,2.70e-21,59;UBERON:0004537,2.70e-21,59;UBERON:0006965,2.70e-21,59;UBERON:0000055,3.20e-21,68;UBERON:0001637,6.09e-21,42;UBERON:0003509,6.09e-21,42;UBERON:0004572,6.09e-21,42;UBERON:0000490,8.76e-20,148;UBERON:0004535,7.76e-18,109;UBERON:0004573,8.49e-18,33;UBERON:0004571,8.49e-18,33;UBERON:0001009,2.02e-16,112;UBERON:0002100,7.69e-16,199;UBERON:0000486,1.84e-15,83;UBERON:0007503,3.37e-15,78;UBERON:0005256,5.10e-15,122;UBERON:0002329,2.05e-14,71;UBERON:0003059,2.05e-14,71;UBERON:0007282,2.05e-14,71;UBERON:0004290,2.05e-14,71;UBERON:0009618,2.05e-14,71;UBERON:0007524,6.39e-14,73;UBERON:0003077,7.15e-14,72;UBERON:0007285,7.15e-14,72;UBERON:0003104,2.89e-13,160;UBERON:0009142,2.89e-13,160;UBERON:0001134,5.09e-13,62;UBERON:0002036,5.09e-13,62;UBERON:0003082,5.09e-13,62;UBERON:0002385,6.07e-12,64;UBERON:0001015,6.07e-12,64;UBERON:0000383,6.07e-12,64;UBERON:0000947,1.06e-10,21;UBERON:0010191,1.06e-10,21;UBERON:0000487,3.93e-08,22;UBERON:0004638,5.06e-08,18;UBERON:0001986,5.06e-08,18;UBERON:0004852,5.06e-08,18;UBERON:0000119,2.24e-07,309;UBERON:0003102,2.33e-07,99;UBERON:0004237,4.88e-07,10;UBERON:0004695,4.88e-07,10;UBERON:0002111,4.88e-07,10;UBERON:0004178,4.88e-07,10;UBERON:0000483,6.59e-07,306;UBERON:0000926,7.96e-07,315;UBERON:0004120,7.96e-07,315;UBERON:0006603,7.96e-07,315 | |||
|phase1_expression=3.99692434395225,4.28201047781966,6.76581139660662,6.00439790118782,5.81049422755474,4.36169262050184,5.06599756336621,0.631719873426831,0.261185628199839,5.6518805395347,1.39560233594486,1.74753097704138,5.53910654279752,1.73272894144065,2.31978163009541,26.2206807116192,24.1077811209591,18.9880623500717,21.4690431467823,0.861847406537515,0.408001382488506,0.313454721478088,0.572471974262113,0.547497700291537,3.51519390865448,0,0,0,0,0,0,7.35536979583142,3.91567694411725,8.50434223383612,0,0.142169232487422,0,0,0,0,0.447830948479849,0.32389366601898,0,0.290796477559129,1.51150377475524,0,0.697287110717054,1.6446715520873,0.619412741790207,0.28769239232215,0,0,1.03423704220986,1.29096936716765,0,0.376484679085209,1.91034305040492,0,2.14258724659632,3.20929027076094,0,0,0.398927315243264,0,1.45104619314292,1.13477044938228,0,0.502497330513487,1.0429658368404,0,1.21079900526674,1.47311054395026,0,0.211255286311942,0,0,0,0,0,0,0,0,0,0.546138611262131,0.889509253863555,0,0,0,0,0,0,0.587237189370939,0.382273228125229,0,0,0,0.196709770113833,0,0.411202997999018,0,0,0,0,0.111410456885174,0.294605907474837,0.221533894583621,0.541607727530031,0.25618263945135,0,0,0,0,0,0,0,0,0,0,0.759059076058509,0,0,0,0.150575119077773,0,0,0,0,0.201606743224732,0,0,4.87613732627923,9.38981203585091,2.68511379871414,5.42158728576849,0.50133791063589,1.15877215168659,11.1340032587154,0.486634870302636,3.40325341790644,9.75609348835281,3.16205228495254,0.130979075497713,1.09288586487763,0.741568885568859,3.57002133020152,4.17911369518241,4.25465473660369,0,0,0,11.5282196272689,5.16140757063675,13.1913390610886,13.0020826642522,3.35599548967925,11.2798397195428,10.2407533603037,8.78616981175718,23.1248070746362,26.1082077956443,4.43112248820062,27.3697958058665,2.68468263302986,18.7508170976393,12.1521292182264,10.0015695678169,11.0019392586823,3.37834441449967,13.7984973719295,7.59412527654503,13.0073238190589,0,0,1.3082821564276,9.93943903390637,11.6500070731413,26.2170178010173,20.078563452417,7.80270440836386,2.80338800071154,9.60740961567345,5.42668606517752,3.7345324247972,16.7041233366413,13.5673379584171,3.48122083583342,3.45705554687999,0.234321431833797,8.42832207441865,2.85235910772225,3.58676833324323,2.46612447151906,1.13311061057692,1.12360645361799,5.30800845262722,1.35117749042945,1.75653827998801,3.56400857184616,1.23633464639278,0,0.718618141816238,3.87173062094352,1.7516592782075,11.6366928503357,5.26773145057006,3.37136575378922,1.80285670687916,4.65071950956086,9.86642996288741,2.34913127700424,2.7551147150743,10.8032794590385,5.04957393268351,5.15281080091258,6.70020682793723,17.8902912175742,13.8360547328902,8.83518209854401,3.77404584433427,6.46584227275248,11.005297368015,8.86618464403234,4.23901480776219,20.6789112884728,39.548187485671,34.9901606374585,1.34171076742555,0.662648841607426,2.20768491452085,3.83545903556871,1.51392510525377,1.45990943630332,12.5159625863853,10.935095949279,6.90674606762403,1.39310378409594,3.60939740834793,3.31259040111563,4.21461725195254,4.33819853790268,2.09558548191549,5.22910665821775,4.74541238222193,3.37078270400411,3.13954344200554,3.8474715694639,6.64339909162183,0,1.2347220339942,0,0,1.96565443335525,0.590789906681404,0,0.245976877086227,5.49016992955282,11.8530308241316,1.1240175325762,5.12697759299317,13.6105014383038,0.651616610620649,0,1.44331342025273,5.44872903382861,20.5465214912688,6.0633908059651,4.62985512576611,3.99533719692656,0,0,0,3.7440682422278,1.48631162288728,10.3107217385455,37.4600145883457,15.3117105021777,16.3892096546212,11.9159914790724,1.91691339582606,1.97065295158377,0,0.207328115540772,0.144119953416961,0.12624243342638,0.761974731506028,0.381988425558278,0,0,0.925447434329912,0.600686115687835,0,3.36393253036082,5.66748089483264,13.1275531619501,28.1812340351956,0,1.690605505112,11.1694008965646,7.28052058379563,0.514414748524284,0,1.0656887160644,9.72250356875403,0.542621605391443,0.823240336780769,2.60588947434988,12.4387182059891,3.95975936466715,19.8949988859327,31.3752045096106,19.194814306955,0,0,0,7.90762023122223,1.14861935834114,9.98458335285029,18.8215698667853,2.26023954805422,5.90901178691655,0.112085143993527,0.197030760201927,0.215627574859517,0.128343036279748,0.508189248444927,0,0.773288812777695,0.837581326671744,0.637938751653163,0,0,0,0.24538298343828,1.50051156317903,1.35632511849868,21.8369404607347,6.42344359669782,11.1968714674094,6.32563640960651,2.40756879782175,2.27407504055985,1.03473071292505,9.29915837949611,4.79359838208428,3.64911180765948,2.15381273209015,0.343143423810856,0,0,0.106727557803444,0,1.66435439510497,1.5119514666484,7.44323423456331,5.21770709179412,7.57782254969299,8.84160129864337,13.3043884757343,7.07757253031873,1.48418066444991,4.78050050788232,13.4946911237977,10.5944031257814,8.82732529612156,6.62399157221768,0.604297247958111,42.908384644903,3.86740153530765,4.36294903025506,2.91345868810747,1.18011973463482,0.902399225814824,22.4884784344891,3.13739907670742,1.461392246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| |||
|short_description=p4@ITGB1 | |||
}} |
Revision as of 02:31, 11 January 2014
Short description: | p4@ITGB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_ITGB1_5end |
Coexpression cluster: | C2058_Smooth_basal_mesenchymal_tubular_Renal_lung_Urothelial |
Association with transcript: | 0bp_to_ENST00000396033, NM_133376, uc001iws.3_5end |
EntrezGene: | ITGB1 |
HGNC: | 6153 |
UniProt: | P05556 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 2.25e-22 | 250 |
mesodermal cell | 5.02e-22 | 121 |
vascular associated smooth muscle cell | 1.39e-17 | 32 |
muscle precursor cell | 5.27e-15 | 58 |
myoblast | 5.27e-15 | 58 |
multi-potent skeletal muscle stem cell | 5.27e-15 | 58 |
smooth muscle cell | 1.14e-14 | 43 |
smooth muscle myoblast | 1.14e-14 | 43 |
muscle cell | 3.39e-14 | 55 |
epithelial cell | 3.25e-13 | 253 |
electrically responsive cell | 1.73e-12 | 61 |
electrically active cell | 1.73e-12 | 61 |
fibroblast | 5.51e-11 | 76 |
endothelial cell of vascular tree | 3.55e-10 | 24 |
blood vessel endothelial cell | 5.06e-08 | 18 |
embryonic blood vessel endothelial progenitor cell | 5.06e-08 | 18 |
endothelial cell | 1.05e-07 | 36 |
lining cell | 1.80e-07 | 58 |
barrier cell | 1.80e-07 | 58 |
aortic smooth muscle cell | 4.88e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 5.07e-09 | 14 |