FFCP PHASE1:Hg19::chr7:100773764..100773799,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr7:100773764..100773799,- to FFCP PHASE1:Hg19::chr7:100773764..100773799,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr7:100773764..100773799,- | |||
|coexpression_cluster_id=C301 | |||
|description=CAGE_peak_at_chr7:100773764..100773799,- | |||
|id=chr7:100773764..100773799,- | |||
|ontology_enrichment_celltype=CL:0000222!2.23e-40!119;CL:0000055!1.03e-31!180;CL:0000220!1.26e-27!246;CL:0002321!6.11e-27!248;CL:0000680!3.39e-25!57;CL:0000056!3.39e-25!57;CL:0000355!3.39e-25!57;CL:0000144!1.04e-24!625;CL:0000183!6.21e-24!59;CL:0000187!8.16e-24!54;CL:0000359!7.85e-23!32;CL:0000192!9.40e-23!42;CL:0000514!9.40e-23!42;CL:0002371!1.07e-22!591;CL:0000393!7.45e-20!60;CL:0000211!7.45e-20!60;CL:0000548!1.42e-19!679;CL:0000004!1.42e-19!679;CL:0000255!1.42e-19!679;CL:0000012!5.21e-19!682;CL:0000213!1.63e-15!57;CL:0000215!1.63e-15!57;CL:0000057!2.19e-15!75;CL:0000115!2.76e-12!35;CL:0002139!3.10e-12!24;CL:0000003!4.49e-12!722;CL:0002078!3.49e-11!44;CL:0000071!5.72e-09!18;CL:0002546!5.72e-09!18;CL:0000723!1.13e-08!436;CL:0000048!1.70e-08!430;CL:0000034!1.21e-07!444;CL:0002539!1.36e-07!10;CL:0002494!5.75e-07!16;CL:1000413!6.40e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000359;1.85e-30;32!CL:0000192;1.67e-20;43!CL:0000187;1.11e-15;55!CL:0002139;6.87e-15;24!CL:0000115;4.82e-14;36!CL:0000393;4.91e-11;61!CL:0000211;4.91e-11;61!CL:0000071;3.99e-10;18!CL:0000213;4.03e-10;58!CL:0000215;4.03e-10;58!CL:1000413;5.47e-10;9!CL:0002539;1.63e-09;10!CL:0002078;3.33e-08;45!CL:0002595;1.04e-07;5!CL:0002494;2.87e-07;16 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,7.92e-43,121;CL:0000359,1.14e-32,32;CL:0000192,5.97e-29,43;CL:0000514,5.97e-29,43;CL:0000680,1.23e-28,58;CL:0000056,1.23e-28,58;CL:0000355,1.23e-28,58;CL:0000187,9.51e-28,55;CL:0000393,1.51e-23,61;CL:0000211,1.51e-23,61;CL:0002321,2.31e-18,250;CL:0000213,5.63e-16,58;CL:0000215,5.63e-16,58;CL:0000115,1.88e-15,36;CL:0002139,7.22e-15,24;CL:0002078,1.11e-11,45;CL:0000071,4.71e-10,18;CL:0002546,4.71e-10,18;CL:1000413,9.40e-10,9;CL:0002539,1.80e-09,10;CL:0000048,4.10e-09,427;CL:0000723,6.52e-09,433;CL:0000034,3.22e-08,441;CL:0002595,9.85e-08,5;CL:0002494,2.39e-07,16 | |||
|ontology_enrichment_development_v019=CL:0000514;1.67e-20;43!CL:0000355;1.08e-15;58!CL:0000222;1.42e-10;121!CL:0002546;3.99e-10;18 | |||
|ontology_enrichment_disease=DOID:2394!1.52e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;2.02e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.68e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0002049!1.30e-35!79;UBERON:0007798!1.30e-35!79;UBERON:0000055!2.05e-33!69;UBERON:0004872!3.58e-30!84;UBERON:0001981!8.88e-30!60;UBERON:0007500!8.88e-30!60;UBERON:0004537!8.88e-30!60;UBERON:0006965!8.88e-30!60;UBERON:0003914!3.01e-28!118;UBERON:0001637!4.78e-28!42;UBERON:0003509!4.78e-28!42;UBERON:0004572!4.78e-28!42;UBERON:0004535!2.51e-27!110;UBERON:0001009!2.33e-26!113;UBERON:0000486!2.42e-26!82;UBERON:0000490!2.17e-25!138;UBERON:0004290!4.50e-25!70;UBERON:0000914!2.59e-23!83;UBERON:0002329!2.59e-23!83;UBERON:0003077!2.59e-23!83;UBERON:0003059!2.59e-23!83;UBERON:0007282!2.59e-23!83;UBERON:0009618!2.59e-23!83;UBERON:0007285!2.59e-23!83;UBERON:0001134!5.77e-22!61;UBERON:0002036!5.77e-22!61;UBERON:0003082!5.77e-22!61;UBERON:0005256!3.96e-21!143;UBERON:0004573!4.35e-21!33;UBERON:0004571!4.35e-21!33;UBERON:0002385!1.59e-20!63;UBERON:0001015!1.59e-20!63;UBERON:0000383!1.59e-20!63;UBERON:0000483!1.12e-15!309;UBERON:0002100!1.38e-15!216;UBERON:0000119!1.51e-15!312;UBERON:0000947!2.52e-12!21;UBERON:0010191!2.52e-12!21;UBERON:0000475!9.75e-10!365;UBERON:0000487!1.79e-09!22;UBERON:0000477!1.81e-09!286;UBERON:0006914!2.03e-09!25;UBERON:0003104!2.46e-09!238;UBERON:0009142!2.46e-09!238;UBERON:0004111!4.30e-09!241;UBERON:0001986!5.72e-09!18;UBERON:0004638!5.72e-09!18;UBERON:0004852!5.72e-09!18;UBERON:0000025!2.12e-08!194;UBERON:0000467!6.22e-08!625;UBERON:0000480!8.29e-08!626;UBERON:0004237!1.36e-07!10;UBERON:0004695!1.36e-07!10;UBERON:0002111!1.36e-07!10;UBERON:0004178!1.36e-07!10;UBERON:0000468!1.66e-07!659;UBERON:0000926!1.96e-07!448;UBERON:0004120!1.96e-07!448;UBERON:0006603!1.96e-07!448;UBERON:0003513!3.36e-07!8;UBERON:0003915!6.40e-07!9;UBERON:0004700!6.40e-07!9;UBERON:0001917!6.40e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;1.37e-28;42!UBERON:0003509;1.37e-28;42!UBERON:0004572;1.37e-28;42!UBERON:0004573;1.31e-25;33!UBERON:0004571;1.31e-25;33!UBERON:0007500;1.33e-22;56!UBERON:0001981;1.33e-22;56!UBERON:0004537;1.33e-22;56!UBERON:0000055;3.36e-21;65!UBERON:0002049;8.13e-18;75!UBERON:0007798;8.13e-18;75!UBERON:0000947;8.30e-15;21!UBERON:0010191;8.30e-15;21!UBERON:0003914;2.76e-14;74!UBERON:0000487;3.24e-10;22!UBERON:0004638;3.99e-10;18!UBERON:0001986;3.99e-10;18!UBERON:0004852;3.99e-10;18!UBERON:0003915;5.47e-10;9!UBERON:0004700;5.47e-10;9!UBERON:0001917;5.47e-10;9!UBERON:0006914;1.63e-09;25!UBERON:0004237;1.63e-09;10!UBERON:0004695;1.63e-09;10!UBERON:0002111;1.63e-09;10!UBERON:0004178;1.63e-09;10!UBERON:0004535;3.99e-09;109!UBERON:0001009;9.07e-09;112!UBERON:0001135;6.87e-08;15!UBERON:0000025;7.17e-08;93!UBERON:0000490;9.96e-08;33!UBERON:0003834;1.04e-07;5!UBERON:0001533;1.04e-07;5!UBERON:0002385;1.95e-07;31!UBERON:0001015;1.95e-07;31!UBERON:0000383;1.95e-07;31!UBERON:0003513;2.40e-07;7 | |||
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| ||
|short_description=p@chr7:100773764..100773799,- | |||
}} | }} |
Latest revision as of 04:14, 31 July 2015
Short description: | p@chr7:100773764..100773799, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:100773764..100773799, - |
Coexpression cluster: | C301_Smooth_mesenchymal_Endothelial_Hepatic_basal_hepatic_chorionic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 7.92e-43 | 121 |
vascular associated smooth muscle cell | 1.14e-32 | 32 |
smooth muscle cell | 5.97e-29 | 43 |
smooth muscle myoblast | 5.97e-29 | 43 |
muscle precursor cell | 1.23e-28 | 58 |
myoblast | 1.23e-28 | 58 |
multi-potent skeletal muscle stem cell | 1.23e-28 | 58 |
muscle cell | 9.51e-28 | 55 |
electrically responsive cell | 1.51e-23 | 61 |
electrically active cell | 1.51e-23 | 61 |
embryonic cell | 2.31e-18 | 250 |
lining cell | 5.63e-16 | 58 |
barrier cell | 5.63e-16 | 58 |
endothelial cell | 1.88e-15 | 36 |
endothelial cell of vascular tree | 7.22e-15 | 24 |
meso-epithelial cell | 1.11e-11 | 45 |
blood vessel endothelial cell | 4.71e-10 | 18 |
embryonic blood vessel endothelial progenitor cell | 4.71e-10 | 18 |
endothelial cell of artery | 9.40e-10 | 9 |
aortic smooth muscle cell | 1.80e-09 | 10 |
multi fate stem cell | 4.10e-09 | 427 |
somatic stem cell | 6.52e-09 | 433 |
stem cell | 3.22e-08 | 441 |
smooth muscle cell of the subclavian artery | 9.85e-08 | 5 |
cardiocyte | 2.39e-07 | 16 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.68e-07 | 14 |