FFCP PHASE1:Hg19::chr12:15114492..15114565,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:15114492..15114565,- to FFCP PHASE1:Hg19::chr12:15114492..15114565,-: NSchange) |
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(12 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=397 | |EntrezGene=397 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=679 | |HGNC=679 | ||
|TSSclassifier=strong | |||
|UniProt=P52566 | |UniProt=P52566 | ||
|association_with_transcript=0bp_to_ENST00000535676,ENST00000541546,NM_001175,uc001rcq.1_5end | |||
|cluster_id=chr12:15114492..15114565,- | |||
|coexpression_cluster_id=C57 | |||
|description=CAGE_peak_1_at_ARHGDIB_5end | |||
|id=chr12:15114492..15114565,- | |||
|ontology_enrichment_celltype=CL:0000037!4.38e-63!172;CL:0000566!4.38e-63!172;CL:0000988!3.53e-60!182;CL:0002032!1.93e-59!165;CL:0000837!1.93e-59!165;CL:0000738!9.56e-55!140;CL:0002031!9.41e-46!124;CL:0002087!5.21e-44!119;CL:0000763!2.13e-33!112;CL:0000049!2.13e-33!112;CL:0000766!3.10e-26!76;CL:0000542!4.24e-23!53;CL:0000051!4.24e-23!53;CL:0000838!1.06e-22!52;CL:0000557!2.69e-22!71;CL:0000839!2.93e-21!70;CL:0002009!1.25e-19!65;CL:0002194!8.31e-19!63;CL:0000576!8.31e-19!63;CL:0000040!8.31e-19!63;CL:0000559!8.31e-19!63;CL:0002057!2.23e-16!42;CL:0000860!1.20e-13!45;CL:0000945!1.72e-11!24;CL:0000826!1.72e-11!24;CL:0000084!3.66e-11!25;CL:0000827!3.66e-11!25;CL:0000791!2.64e-10!18;CL:0000789!2.64e-10!18;CL:0002420!2.64e-10!18;CL:0002419!2.64e-10!18;CL:0000790!2.64e-10!18;CL:0000134!1.26e-09!358;CL:0002320!1.53e-08!365;CL:0000236!4.47e-08!14;CL:0000115!1.22e-07!35;CL:0000625!6.26e-07!11 | |||
|ontology_enrichment_celltype_v019=CL:0000542;1.06e-13;53!CL:0002087;1.22e-12;104!CL:0000766;1.65e-12;69!CL:0000738;1.82e-12;136!CL:0000576;4.67e-12;48!CL:0000473;1.50e-11;39!CL:0000234;1.50e-11;39!CL:0000945;1.59e-11;24!CL:0000988;2.65e-11;177!CL:0000084;2.86e-11;25!CL:0000763;4.81e-11;100!CL:0000860;9.39e-11;33!CL:0002057;9.39e-11;33!CL:0000791;2.47e-10;18!CL:0000789;2.47e-10;18!CL:0002419;2.47e-10;18!CL:0000236;8.85e-08;13!CL:0000625;6.01e-07;11!CL:0000115;6.19e-07;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,5.11e-67,168;CL:0000988,1.53e-63,177;CL:0002032,2.53e-63,161;CL:0000837,2.53e-63,161;CL:0000738,9.24e-59,136;CL:0002031,1.33e-49,120;CL:0002087,7.26e-48,115;CL:0000763,1.03e-36,108;CL:0000049,1.03e-36,108;CL:0000766,8.04e-30,72;CL:0000557,1.20e-25,67;CL:0000839,1.57e-24,66;CL:0000542,3.03e-23,53;CL:0000051,3.03e-23,53;CL:0002009,6.94e-23,61;CL:0000838,7.57e-23,52;CL:0002194,4.90e-22,59;CL:0000576,4.90e-22,59;CL:0000040,4.90e-22,59;CL:0000559,4.90e-22,59;CL:0000473,2.12e-19,48;CL:0000234,2.12e-19,48;CL:0000860,2.01e-16,42;CL:0002057,2.01e-16,42;CL:0000945,1.60e-11,24;CL:0000826,1.60e-11,24;CL:0000084,2.87e-11,25;CL:0000827,2.87e-11,25;CL:0000791,2.48e-10,18;CL:0000789,2.48e-10,18;CL:0002420,2.48e-10,18;CL:0002419,2.48e-10,18;CL:0000790,2.48e-10,18;CL:0000134,4.73e-10,354;CL:0002320,6.81e-09,361;CL:0000236,4.26e-08,14;CL:0000115,7.31e-08,36;CL:0000625,6.02e-07,11 | |||
|ontology_enrichment_development_v019=CL:0000051;1.06e-13;53!CL:0002057;5.89e-12;42!CL:0000790;2.47e-10;18!CL:0000049;2.80e-10;108 | |||
|ontology_enrichment_disease=DOID:2531!1.27e-12!51;DOID:0060083!1.27e-12!51;DOID:1240!8.11e-11!39;DOID:8692!7.89e-08!31 | |||
|ontology_enrichment_disease_v019=DOID:1240;2.27e-08;39!DOID:2531;4.93e-08;51!DOID:0060083;4.93e-08;51!DOID:8692;1.50e-07;31 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,9.02e-13,51;DOID:0060083,9.02e-13,51;DOID:1240,6.61e-11,39;DOID:8692,6.63e-08,31 | |||
|ontology_enrichment_uberon=UBERON:0002193!1.18e-29!112;UBERON:0002390!2.89e-29!102;UBERON:0003061!2.89e-29!102;UBERON:0003081!1.71e-27!216;UBERON:0002371!2.58e-19!80;UBERON:0002405!2.52e-17!115;UBERON:0001474!6.36e-15!86;UBERON:0004765!1.78e-09!101;UBERON:0001434!1.78e-09!101;UBERON:0001009!2.27e-08!113;UBERON:0004535!2.89e-08!110;UBERON:0000178!3.27e-08!15;UBERON:0000179!3.27e-08!15;UBERON:0000463!3.27e-08!15;UBERON:0002384!1.60e-07!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.11e-08;15!UBERON:0000179;3.11e-08;15!UBERON:0000463;3.11e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.65e-32,108;UBERON:0002390,2.77e-32,98;UBERON:0003061,2.77e-32,98;UBERON:0003081,7.84e-32,203;UBERON:0002405,2.46e-25,93;UBERON:0002371,5.67e-22,76;UBERON:0001474,3.01e-17,82;UBERON:0004765,1.57e-14,90;UBERON:0001434,6.89e-10,100;UBERON:0001009,1.56e-08,112;UBERON:0004535,1.98e-08,109;UBERON:0000926,2.43e-08,315;UBERON:0004120,2.43e-08,315;UBERON:0006603,2.43e-08,315;UBERON:0000178,3.12e-08,15;UBERON:0000179,3.12e-08,15;UBERON:0000463,3.12e-08,15;UBERON:0002384,8.68e-08,371 | |||
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| ||
|short_description=p1@ARHGDIB | |||
}} | }} |
Latest revision as of 14:28, 17 September 2015
Short description: | p1@ARHGDIB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ARHGDIB_5end |
Coexpression cluster: | C57_Neutrophils_Eosinophils_Whole_CD4_CD8_CD19_Natural |
Association with transcript: | 0bp_to_ENST00000535676, ENST00000541546, NM_001175, uc001rcq.1_5end |
EntrezGene: | ARHGDIB |
HGNC: | 679 |
UniProt: | P52566 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 1.65e-32 | 108 |
hematopoietic system | 2.77e-32 | 98 |
blood island | 2.77e-32 | 98 |
lateral plate mesoderm | 7.84e-32 | 203 |
immune system | 2.46e-25 | 93 |
bone marrow | 5.67e-22 | 76 |
bone element | 3.01e-17 | 82 |
skeletal element | 1.57e-14 | 90 |
skeletal system | 6.89e-10 | 100 |
circulatory system | 1.56e-08 | 112 |
cardiovascular system | 1.98e-08 | 109 |
mesoderm | 2.43e-08 | 315 |
mesoderm-derived structure | 2.43e-08 | 315 |
presumptive mesoderm | 2.43e-08 | 315 |
blood | 3.12e-08 | 15 |
haemolymphatic fluid | 3.12e-08 | 15 |
organism substance | 3.12e-08 | 15 |
connective tissue | 8.68e-08 | 371 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 9.02e-13 | 51 |
immune system cancer | 9.02e-13 | 51 |
leukemia | 6.61e-11 | 39 |
myeloid leukemia | 6.63e-08 | 31 |