FFCP PHASE1:Hg19::chr16:128274..128286,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4350 | |EntrezGene=4350 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7211 | |HGNC=7211 | ||
|TSSclassifier=strong | |||
|UniProt=P29372 | |UniProt=P29372 | ||
|association_with_transcript=18bp_to_ENST00000219431_5end | |association_with_transcript=18bp_to_ENST00000219431_5end | ||
|cluster_id=chr16:128274..128286,+ | |||
|coexpression_cluster_id=C345 | |||
|description=CAGE_peak_2_at_MPG_5end | |description=CAGE_peak_2_at_MPG_5end | ||
|id=chr16:128274..128286,+ | |id=chr16:128274..128286,+ | ||
|ontology_enrichment_celltype=CL:0000222!7.54e-35!119;CL:0000055!1.05e-31!180;CL:0000183!5.27e-24!59;CL:0000220!1.29e-22!246;CL:0000680!1.38e-22!57;CL:0000056!1.38e-22!57;CL:0000355!1.38e-22!57;CL:0000144!4.48e-22!625;CL:0002321!5.81e-22!248;CL:0000187!8.13e-22!54;CL:0002371!1.60e-21!591;CL:0000192!2.63e-19!42;CL:0000514!2.63e-19!42;CL:0000393!3.75e-19!60;CL:0000211!3.75e-19!60;CL:0000012!3.70e-17!682;CL:0000548!9.05e-17!679;CL:0000004!9.05e-17!679;CL:0000255!9.05e-17!679;CL:0000359!2.02e-16!32;CL:0000213!6.20e-13!57;CL:0000215!6.20e-13!57;CL:0000115!4.73e-12!35;CL:0002139!5.71e-12!24;CL:0000057!7.46e-12!75;CL:0002078!1.33e-11!44;CL:0000071!2.54e-10!18;CL:0002546!2.54e-10!18;CL:0000003!2.84e-09!722;CL:0000048!3.94e-09!430;CL:0000723!1.19e-08!436;CL:0000034!2.50e-08!444 | |ontology_enrichment_celltype=CL:0000222!7.54e-35!119;CL:0000055!1.05e-31!180;CL:0000183!5.27e-24!59;CL:0000220!1.29e-22!246;CL:0000680!1.38e-22!57;CL:0000056!1.38e-22!57;CL:0000355!1.38e-22!57;CL:0000144!4.48e-22!625;CL:0002321!5.81e-22!248;CL:0000187!8.13e-22!54;CL:0002371!1.60e-21!591;CL:0000192!2.63e-19!42;CL:0000514!2.63e-19!42;CL:0000393!3.75e-19!60;CL:0000211!3.75e-19!60;CL:0000012!3.70e-17!682;CL:0000548!9.05e-17!679;CL:0000004!9.05e-17!679;CL:0000255!9.05e-17!679;CL:0000359!2.02e-16!32;CL:0000213!6.20e-13!57;CL:0000215!6.20e-13!57;CL:0000115!4.73e-12!35;CL:0002139!5.71e-12!24;CL:0000057!7.46e-12!75;CL:0002078!1.33e-11!44;CL:0000071!2.54e-10!18;CL:0002546!2.54e-10!18;CL:0000003!2.84e-09!722;CL:0000048!3.94e-09!430;CL:0000723!1.19e-08!436;CL:0000034!2.50e-08!444 | ||
|ontology_enrichment_celltype_v019=CL:0000359;3.50e-17;32!CL:0000192;4.95e-16;43!CL:0000187;1.43e-13;55!CL:0002139;2.88e-13;24!CL:0000115;1.78e-12;36!CL:0000071;2.36e-11;18!CL:0000393;2.24e-10;61!CL:0000211;2.24e-10;61!CL:0002078;1.06e-09;45!CL:0000213;5.80e-09;58!CL:0000215;5.80e-09;58!CL:0000134;5.01e-08;55!CL:0000048;1.36e-07;58!CL:0000723;1.53e-07;61!CL:1000413;2.94e-07;9!CL:0002539;7.21e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,3.31e-40,121;CL:0000680,8.84e-26,58;CL:0000056,8.84e-26,58;CL:0000355,8.84e-26,58;CL:0000187,6.53e-25,55;CL:0002321,8.64e-24,250;CL:0000192,4.45e-22,43;CL:0000514,4.45e-22,43;CL:0000393,3.49e-21,61;CL:0000211,3.49e-21,61;CL:0000359,2.72e-18,32;CL:0000213,6.12e-15,58;CL:0000215,6.12e-15,58;CL:0000115,9.46e-15,36;CL:0002078,1.30e-13,45;CL:0002139,2.80e-13,24;CL:0000048,3.64e-13,427;CL:0000057,7.80e-13,76;CL:0000723,1.49e-12,433;CL:0000034,9.22e-12,441;CL:0000071,2.01e-11,18;CL:0002546,2.01e-11,18;CL:1000413,3.09e-07,9;CL:0002539,7.85e-07,10 | |||
|ontology_enrichment_development_v019=CL:0000514;4.95e-16;43!CL:0000355;2.94e-13;58!CL:0002546;2.36e-11;18!CL:0000222;1.62e-10;121 | |||
|ontology_enrichment_disease=DOID:2394!5.23e-07!14 | |ontology_enrichment_disease=DOID:2394!5.23e-07!14 | ||
|ontology_enrichment_disease_v019=DOID:2394;1.06e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.07e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0002049!6.55e-32!79;UBERON:0007798!6.55e-32!79;UBERON:0000055!7.37e-29!69;UBERON:0001981!5.60e-26!60;UBERON:0007500!5.60e-26!60;UBERON:0004537!5.60e-26!60;UBERON:0006965!5.60e-26!60;UBERON:0004872!2.91e-25!84;UBERON:0000914!6.08e-24!83;UBERON:0002329!6.08e-24!83;UBERON:0003077!6.08e-24!83;UBERON:0003059!6.08e-24!83;UBERON:0007282!6.08e-24!83;UBERON:0009618!6.08e-24!83;UBERON:0007285!6.08e-24!83;UBERON:0004535!1.13e-23!110;UBERON:0004290!2.30e-23!70;UBERON:0001009!1.39e-22!113;UBERON:0001637!2.41e-22!42;UBERON:0003509!2.41e-22!42;UBERON:0004572!2.41e-22!42;UBERON:0000486!2.84e-21!82;UBERON:0003914!7.37e-21!118;UBERON:0001134!3.22e-20!61;UBERON:0002036!3.22e-20!61;UBERON:0003082!3.22e-20!61;UBERON:0005256!7.26e-19!143;UBERON:0000490!7.86e-19!138;UBERON:0002385!8.27e-19!63;UBERON:0001015!8.27e-19!63;UBERON:0000383!8.27e-19!63;UBERON:0004573!1.81e-17!33;UBERON:0004571!1.81e-17!33;UBERON:0002100!1.08e-14!216;UBERON:0000119!1.85e-11!312;UBERON:0000483!6.32e-11!309;UBERON:0001986!2.54e-10!18;UBERON:0004638!2.54e-10!18;UBERON:0004852!2.54e-10!18;UBERON:0000947!3.13e-10!21;UBERON:0010191!3.13e-10!21;UBERON:0006914!1.09e-09!25;UBERON:0000487!2.82e-09!22;UBERON:0003104!3.89e-09!238;UBERON:0009142!3.89e-09!238;UBERON:0000477!5.70e-08!286 | |ontology_enrichment_uberon=UBERON:0002049!6.55e-32!79;UBERON:0007798!6.55e-32!79;UBERON:0000055!7.37e-29!69;UBERON:0001981!5.60e-26!60;UBERON:0007500!5.60e-26!60;UBERON:0004537!5.60e-26!60;UBERON:0006965!5.60e-26!60;UBERON:0004872!2.91e-25!84;UBERON:0000914!6.08e-24!83;UBERON:0002329!6.08e-24!83;UBERON:0003077!6.08e-24!83;UBERON:0003059!6.08e-24!83;UBERON:0007282!6.08e-24!83;UBERON:0009618!6.08e-24!83;UBERON:0007285!6.08e-24!83;UBERON:0004535!1.13e-23!110;UBERON:0004290!2.30e-23!70;UBERON:0001009!1.39e-22!113;UBERON:0001637!2.41e-22!42;UBERON:0003509!2.41e-22!42;UBERON:0004572!2.41e-22!42;UBERON:0000486!2.84e-21!82;UBERON:0003914!7.37e-21!118;UBERON:0001134!3.22e-20!61;UBERON:0002036!3.22e-20!61;UBERON:0003082!3.22e-20!61;UBERON:0005256!7.26e-19!143;UBERON:0000490!7.86e-19!138;UBERON:0002385!8.27e-19!63;UBERON:0001015!8.27e-19!63;UBERON:0000383!8.27e-19!63;UBERON:0004573!1.81e-17!33;UBERON:0004571!1.81e-17!33;UBERON:0002100!1.08e-14!216;UBERON:0000119!1.85e-11!312;UBERON:0000483!6.32e-11!309;UBERON:0001986!2.54e-10!18;UBERON:0004638!2.54e-10!18;UBERON:0004852!2.54e-10!18;UBERON:0000947!3.13e-10!21;UBERON:0010191!3.13e-10!21;UBERON:0006914!1.09e-09!25;UBERON:0000487!2.82e-09!22;UBERON:0003104!3.89e-09!238;UBERON:0009142!3.89e-09!238;UBERON:0000477!5.70e-08!286 | ||
|ontology_enrichment_uberon_v019=UBERON:0001637;6.46e-18;42!UBERON:0003509;6.46e-18;42!UBERON:0004572;6.46e-18;42!UBERON:0004573;1.29e-17;33!UBERON:0004571;1.29e-17;33!UBERON:0007500;1.78e-16;56!UBERON:0001981;1.78e-16;56!UBERON:0004537;1.78e-16;56!UBERON:0000055;3.03e-15;65!UBERON:0002049;3.66e-14;75!UBERON:0007798;3.66e-14;75!UBERON:0003914;7.53e-12;74!UBERON:0004638;2.36e-11;18!UBERON:0001986;2.36e-11;18!UBERON:0004852;2.36e-11;18!UBERON:0000947;3.94e-11;21!UBERON:0010191;3.94e-11;21!UBERON:0006914;1.49e-10;25!UBERON:0000487;4.59e-10;22!UBERON:0004535;3.08e-08;109!UBERON:0001009;1.31e-07;112!UBERON:0003915;2.94e-07;9!UBERON:0004700;2.94e-07;9!UBERON:0001917;2.94e-07;9!UBERON:0002385;3.16e-07;31!UBERON:0001015;3.16e-07;31!UBERON:0000383;3.16e-07;31!UBERON:0000490;3.71e-07;33!UBERON:0000025;4.26e-07;93!UBERON:0004237;7.21e-07;10!UBERON:0004695;7.21e-07;10!UBERON:0002111;7.21e-07;10!UBERON:0004178;7.21e-07;10 | |||
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| ||
|short_description=p2@MPG | |short_description=p2@MPG | ||
}} | }} |
Latest revision as of 15:53, 24 September 2015
Short description: | p2@MPG |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_MPG_5end |
Coexpression cluster: | C345_Mesenchymal_Fibroblast_Alveolar_Renal_Pericytes_Hepatic_Smooth |
Association with transcript: | 18bp_to_ENST00000219431_5end |
EntrezGene: | MPG |
HGNC: | 7211 |
UniProt: | P29372 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 3.31e-40 | 121 |
muscle precursor cell | 8.84e-26 | 58 |
myoblast | 8.84e-26 | 58 |
multi-potent skeletal muscle stem cell | 8.84e-26 | 58 |
muscle cell | 6.53e-25 | 55 |
embryonic cell | 8.64e-24 | 250 |
smooth muscle cell | 4.45e-22 | 43 |
smooth muscle myoblast | 4.45e-22 | 43 |
electrically responsive cell | 3.49e-21 | 61 |
electrically active cell | 3.49e-21 | 61 |
vascular associated smooth muscle cell | 2.72e-18 | 32 |
lining cell | 6.12e-15 | 58 |
barrier cell | 6.12e-15 | 58 |
endothelial cell | 9.46e-15 | 36 |
meso-epithelial cell | 1.30e-13 | 45 |
endothelial cell of vascular tree | 2.80e-13 | 24 |
multi fate stem cell | 3.64e-13 | 427 |
fibroblast | 7.80e-13 | 76 |
somatic stem cell | 1.49e-12 | 433 |
stem cell | 9.22e-12 | 441 |
blood vessel endothelial cell | 2.01e-11 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.01e-11 | 18 |
endothelial cell of artery | 3.09e-07 | 9 |
aortic smooth muscle cell | 7.85e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.07e-07 | 14 |