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FFCP PHASE1:Mm9::chr2:25947351..25947375,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chr2:25947351..25947375,-
|DHSsupport=NA
|short_description=p3@Nacc2
|DPIdataset=NA
|description=CAGE_peak_3_at_Nacc2_5end
|association_with_transcript=-12bp_to_ENSMUST00000152133_5end
|EntrezGene=67991
|EntrezGene=67991
|HGNC=
|HGNC=
|MCL_coexpression_id=283
|TSSclassifier=NA
|UniProt=
|UniProt=
|association_with_transcript=-12bp_to_ENSMUST00000152133_5end
|cluster_id=chr2:25947351..25947375,-
|description=CAGE_peak_3_at_Nacc2_5end
|id=chr2:25947351..25947375,-
|ontology_enrichment_celltype=CL:0000221!3.04e-24!44;CL:0000133!3.04e-24!44;CL:0002319!1.23e-23!43;CL:0000055!1.42e-19!50;CL:0000540!3.29e-17!33;CL:0000047!3.29e-17!33;CL:0000031!3.29e-17!33;CL:0000404!3.29e-17!33;CL:0000117!3.48e-15!23;CL:0000337!3.48e-15!23;CL:0000393!3.36e-14!39;CL:0000211!3.36e-14!39;CL:0002321!3.84e-11!70;CL:0000220!3.84e-11!70;CL:0002453!1.95e-07!8;CL:0000333!2.73e-07!10;CL:0000095!2.73e-07!10;CL:0000243!2.73e-07!10;CL:0000123!2.73e-07!10;CL:0000125!2.73e-07!10;CL:0000030!2.73e-07!10;CL:0000339!2.73e-07!10
|ontology_enrichment_celltype_v019_2=CL:0000221,5.60e-22,44;CL:0000133,5.60e-22,44;CL:0002319,6.21e-21,43;CL:0000117,1.90e-19,23;CL:0000337,1.90e-19,23;CL:0000540,1.42e-13,33;CL:0000047,1.42e-13,33;CL:0000031,1.42e-13,33;CL:0000404,1.42e-13,33;CL:0002453,3.31e-11,8;CL:0002321,4.39e-11,70;CL:0000393,1.00e-10,39;CL:0000211,1.00e-10,39;CL:0000333,1.11e-08,10;CL:0000095,1.11e-08,10;CL:0000243,1.11e-08,10;CL:0000123,1.11e-08,10;CL:0000125,1.11e-08,10;CL:0000030,1.11e-08,10;CL:0000339,1.11e-08,10;CL:0000128,7.22e-08,6;CL:0000126,7.22e-08,6;CL:0000127,7.22e-08,6;CL:0002610,9.78e-07,3
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!4.65e-42!75;UBERON:0001016!4.65e-42!75;UBERON:0001017!8.61e-42!73;UBERON:0005743!8.61e-42!73;UBERON:0004121!1.75e-32!102;UBERON:0000924!1.75e-32!102;UBERON:0006601!1.75e-32!102;UBERON:0001049!1.53e-29!52;UBERON:0005068!1.53e-29!52;UBERON:0006241!1.53e-29!52;UBERON:0007135!1.53e-29!52;UBERON:0000955!2.47e-28!50;UBERON:0006238!2.47e-28!50;UBERON:0000033!3.26e-28!63;UBERON:0002616!1.70e-27!49;UBERON:0002346!8.55e-26!71;UBERON:0003075!8.55e-26!71;UBERON:0007284!8.55e-26!71;UBERON:0002020!1.08e-22!34;UBERON:0003080!2.98e-20!40;UBERON:0003056!1.93e-19!49;UBERON:0002780!2.00e-19!39;UBERON:0001890!2.00e-19!39;UBERON:0006240!2.00e-19!39;UBERON:0002791!4.63e-19!29;UBERON:0003528!4.63e-19!29;UBERON:0001893!4.63e-19!29;UBERON:0007811!2.90e-14!86;UBERON:0000956!1.08e-13!21;UBERON:0001869!1.08e-13!21;UBERON:0000203!1.08e-13!21;UBERON:0000153!5.66e-13!94;UBERON:0002619!5.13e-12!17;UBERON:0003076!8.32e-10!12;UBERON:0003057!8.32e-10!12;UBERON:0002021!5.75e-08!10;UBERON:0000411!5.75e-08!10;UBERON:0001950!5.75e-08!10;UBERON:0004111!2.82e-07!122;UBERON:0000025!6.12e-07!114
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.35e-47,73;UBERON:0001016,5.17e-46,75;UBERON:0000073,1.46e-44,54;UBERON:0001049,4.70e-41,52;UBERON:0005068,4.70e-41,52;UBERON:0006241,4.70e-41,52;UBERON:0007135,4.70e-41,52;UBERON:0004121,1.19e-38,95;UBERON:0000924,1.19e-38,95;UBERON:0006601,1.19e-38,95;UBERON:0002020,2.06e-36,34;UBERON:0002346,5.16e-35,64;UBERON:0003075,5.16e-35,64;UBERON:0007284,5.16e-35,64;UBERON:0000955,1.29e-33,47;UBERON:0006238,1.29e-33,47;UBERON:0002616,4.28e-32,46;UBERON:0010371,4.88e-31,73;UBERON:0003528,4.39e-29,29;UBERON:0002791,4.39e-29,29;UBERON:0001893,4.39e-29,29;UBERON:0003080,1.48e-25,40;UBERON:0002780,4.70e-24,39;UBERON:0001890,4.70e-24,39;UBERON:0006240,4.70e-24,39;UBERON:0010314,2.11e-22,92;UBERON:0003056,6.09e-21,49;UBERON:0002619,6.22e-21,17;UBERON:0000956,2.29e-18,21;UBERON:0001869,2.29e-18,21;UBERON:0000203,2.29e-18,21;UBERON:0003076,3.59e-16,12;UBERON:0003057,3.59e-16,12;UBERON:0002021,6.39e-15,10;UBERON:0000411,6.39e-15,10;UBERON:0001950,6.39e-15,10;UBERON:0004111,2.36e-13,122;UBERON:0000025,3.57e-13,114;UBERON:0002420,5.06e-12,8;UBERON:0007245,5.06e-12,8;UBERON:0010009,5.06e-12,8;UBERON:0010011,5.06e-12,8;UBERON:0000454,5.06e-12,8;UBERON:0011216,5.83e-12,194;UBERON:0002240,3.53e-10,6;UBERON:0005174,3.53e-10,6;UBERON:0001137,3.53e-10,6;UBERON:0001948,1.92e-08,5;UBERON:0002315,1.92e-08,5;UBERON:0002950,3.47e-08,4;UBERON:0001891,3.47e-08,4;UBERON:0009616,3.47e-08,4;UBERON:0010286,3.47e-08,4;UBERON:0004733,1.29e-07,6;UBERON:0004732,1.29e-07,6;UBERON:0002028,1.29e-07,6;UBERON:0007277,1.29e-07,6;UBERON:0001954,1.35e-07,7;UBERON:0003022,1.35e-07,7;UBERON:0002421,1.35e-07,7;UBERON:0000349,1.35e-07,7;UBERON:0002600,1.35e-07,7;UBERON:0000119,2.51e-07,176;UBERON:0000369,3.76e-07,5;UBERON:0002435,3.76e-07,5;UBERON:0000204,3.76e-07,5;UBERON:0010082,3.76e-07,5;UBERON:0000483,6.18e-07,174;UBERON:0004684,9.78e-07,3;UBERON:0002275,9.78e-07,3
|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36069264241712,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503587271902309,0.101376931219515,0,0.782391344348039,47.5294840909373,10.7646229539891,7.19390626574849,9.79904951377538,28.7505128729943,0,0,0,0,0,0,2.02316460859598,0.528990979272033,0.633831403506179,2.03306719241479,0,0,0,0,23.9680088414724,23.4373166246148,0.725827286159344,0.540023753326763,0.420649922702764,14.8538511889978,12.589506834242,1.34739879136449,2.58782771749238,5.51531271966013,29.731287869835,20.3022867555448,20.1224558565679,1.84640802822271,1.37231465403614,1.56274011167028,25.9640189071284,13.5063026407603,15.279824777681,6.77645746589436,4.9830088279686,3.35519002485541,0.151452386666368,0.302286240427142,0,0,0,0,0,0,0.280888840263504,0,0,0,1.97180787687353,0,0,0,0.216491041011214,0.506719730950197,0,0.34255163915718,0,0,0.346970653532272,0,0,0,0,0,0,0,0,0.161766849947409,0.220841518460394,0,0,6.14839673724249,5.23616767033638,0,0,0,0,19.7723644014366,8.23501085073528,1.7591609295801,4.69325664519146,4.34716277461562,13.2984348518118,8.11206315338788,0,0,0,0.210441855886474,0.260240885925407,0,0,0.150704817835715,0.0680364991513279,0.384341160854549,0.0937017245597288,1.03481348295606,0.215567992932842,0,0,0.219195732427575,0,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0,0.232533944750408,0.268273401399619,0,0,0,0,0,0,0,3.78521907415429,0.720332286654991,0,0,0.213288250535234,0,0,0,0,0,0,0,0.251335208800269,0,0,0,0,0,0,0.114248512609729,0,0.203651327845314,0.387904974335251,0.420814919341911,0.442655759869801,0,0.31399745568275,0.123397163921801,0,0,0,0,0.202860121388503,0,0,0,0,0.274561413188081,0,0,0,0,0,0,0,0,0.162964976442026,0.339490171550376,0,0,0,0,0.157635144106191,0,0.159454768657487,0,0,0,0,0,0,0,22.4770825982909,15.4719426301708,0,0,0.631016438832513,0.780877488593277,2.15423397732799,0.238968797952552,0.891194696329576,0.283076530788832,0,0.292255857911312,0.395287777946524,12.2102100240287,0,0.35613120733451,0.162886959353576,0.329940245945071,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0.388076051348264,0,0.177340233642274,0.178368817602071,0.329098041204242,0.304464949114599,0,0,0,0,0,0,0.119372344003136,0,0,25.5886916774503,0.170870880797853,0,0,0.188368457004691,0.136694227721025,0,0.169978429993855,0,0,0,0,0.203319467126849,0,0,0,0,0,0,0,1.24267862617385,0,0,0,0,0,0.337912250981556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.501572104035363,4.51801474093653,6.44455331110048,7.44764167471216,5.84300819968538,6.16574267793578,6.0431511791176,4.72515750162264,8.55610286126019,7.25027854374727,6.21312374102184,0.103787347584177,0,0.341467211508268,0.972426868273176,0.838452650511929,0.183843508450014,0.666740183404846,0,0.64183841918363,0.252697211763798,0,0.188626341386076,0.280924522409647,0.192075457214608,0.0574354689556133,0.476293691283074,0.231768651889711,0,0.412085900803307,0.294397840268795,0.342869252385415,0.354951612318675,0.238436189947321,0,0.188218760830661,0.25384382367503,0.365855945745545,0,0.135804113845862,0,0.118635018124174,0.0985044823755635,0,0.619747364743864,0.385813221962283,0,0.467863216890817,0.214871054048298,0.57386499620653,1.10295709559758,0.695603506861264
|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36069264241712,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503587271902309,0.101376931219515,0,0.782391344348039,47.5294840909373,10.7646229539891,7.19390626574849,9.79904951377538,28.7505128729943,0,0,0,0,0,0,2.02316460859598,0.528990979272033,0.633831403506179,2.03306719241479,0,0,0,0,23.9680088414724,23.4373166246148,0.725827286159344,0.540023753326763,0.420649922702764,14.8538511889978,12.589506834242,1.34739879136449,2.58782771749238,5.51531271966013,29.731287869835,20.3022867555448,20.1224558565679,1.84640802822271,1.37231465403614,1.56274011167028,25.9640189071284,13.5063026407603,15.279824777681,6.77645746589436,4.9830088279686,3.35519002485541,0.151452386666368,0.302286240427142,0,0,0,0,0,0,0.280888840263504,0,0,0,1.97180787687353,0,0,0,0.216491041011214,0.506719730950197,0,0.34255163915718,0,0,0.346970653532272,0,0,0,0,0,0,0,0,0.161766849947409,0.220841518460394,0,0,6.14839673724249,5.23616767033638,0,0,0,0,19.7723644014366,8.23501085073528,1.7591609295801,4.69325664519146,4.34716277461562,13.2984348518118,8.11206315338788,0,0,0,0.210441855886474,0.260240885925407,0,0,0.150704817835715,0.0680364991513279,0.384341160854549,0.0937017245597288,1.03481348295606,0.215567992932842,0,0,0.219195732427575,0,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0,0.232533944750408,0.268273401399619,0,0,0,0,0,0,0,3.78521907415429,0.720332286654991,0,0,0.213288250535234,0,0,0,0,0,0,0,0.251335208800269,0,0,0,0,0,0,0.114248512609729,0,0.203651327845314,0.387904974335251,0.420814919341911,0.442655759869801,0,0.31399745568275,0.123397163921801,0,0,0,0,0.202860121388503,0,0,0,0,0.274561413188081,0,0,0,0,0,0,0,0,0.162964976442026,0.339490171550376,0,0,0,0,0.157635144106191,0,0.159454768657487,0,0,0,0,0,0,0,22.4770825982909,15.4719426301708,0,0,0.631016438832513,0.780877488593277,2.15423397732799,0.238968797952552,0.891194696329576,0.283076530788832,0,0.292255857911312,0.395287777946524,12.2102100240287,0,0.35613120733451,0.162886959353576,0.329940245945071,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0.388076051348264,0,0.177340233642274,0.178368817602071,0.329098041204242,0.304464949114599,0,0,0,0,0,0,0.119372344003136,0,0,25.5886916774503,0.170870880797853,0,0,0.188368457004691,0.136694227721025,0,0.169978429993855,0,0,0,0,0.203319467126849,0,0,0,0,0,0,0,1.24267862617385,0,0,0,0,0,0.337912250981556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.501572104035363,4.51801474093653,6.44455331110048,7.44764167471216,5.84300819968538,6.16574267793578,6.0431511791176,4.72515750162264,8.55610286126019,7.25027854374727,6.21312374102184,0.103787347584177,0,0.341467211508268,0.972426868273176,0.838452650511929,0.183843508450014,0.666740183404846,0,0.64183841918363,0.252697211763798,0,0.188626341386076,0.280924522409647,0.192075457214608,0.0574354689556133,0.476293691283074,0.231768651889711,0,0.412085900803307,0.294397840268795,0.342869252385415,0.354951612318675,0.238436189947321,0,0.188218760830661,0.25384382367503,0.365855945745545,0,0.135804113845862,0,0.118635018124174,0.0985044823755635,0,0.619747364743864,0.385813221962283,0,0.467863216890817,0.214871054048298,0.57386499620653,1.10295709559758,0.695603506861264
|short_description=p3@Nacc2
}}
}}

Latest revision as of 10:46, 26 September 2015

Short description:p3@Nacc2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Nacc2_5end
Coexpression cluster:MCL_coexpression_mm9:283
Association with transcript: -12bp_to_ENSMUST00000152133_5end
EntrezGene:Nacc2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Nacc2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.64
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.36
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.50
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.10
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C247.53
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B810.76
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C37.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C49.80
Mouse Astrocytes, donor3.CNhs12107.11633-122C428.75
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C32.02
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C62.03
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C823.97
Mouse Microglia, donor2.CNhs12634.11736-123E823.44
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.73
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.54
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.42
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F114.85
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D512.59
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.35
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.59
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D65.52
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D329.73
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F320.30
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D720.12
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.85
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.37
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.56
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E425.96
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E513.51
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I615.28
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D66.78
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F64.98
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E13.36
Mouse Schwann, donor1.CNhs12507.11728-123D90.15
Mouse Schwann, donor2.CNhs12573.11746-123F90.30
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.97
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.51
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.34
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.00
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B26.15
cerebellum, neonate N30.CNhs11135.1395-42I25.24
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A419.77
corpus striatum, adult.CNhs10487.19-21D88.24
corpus striatum, neonate N00.CNhs11226.630-43F11.76
cortex, adult.CNhs10473.12-14D54.69
cortex, neonate N30.CNhs11107.1392-42F24.35
diencephalon, adult.CNhs10482.20-12F213.30
diencephalon, neonate N30.CNhs11201.1388-42B28.11
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C60.26
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.15
eyeball, neonate N00.CNhs11207.633-15C60.07
eyeball, neonate N01.CNhs11140.1532-43E70.38
eyeball, neonate N02.CNhs11205.1551-44G80.09
eyeball, neonate N16.CNhs11188.777-19A21.03
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E83.79
hippocampus, neonate N00.CNhs11228.627-43G10.72
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G70.42
kidney, neonate N10.CNhs11206.758-6D50.44
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.31
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C222.48
medulla oblongata, neonate N30.CNhs11200.1396-42A315.47
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.78
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E32.15
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.89
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I912.21
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.33
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.39
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.33
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C925.59
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.00
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C11.24
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A14.52
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A26.44
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A37.45
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D75.84
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A46.17
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A56.04
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A64.73
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A78.56
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A87.25
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A96.21
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.34
whole body, embryo E14.5.CNhs10578.420-27D20.97
whole body, embryo E14.CNhs10519.395-14B10.84
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.06
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.23
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.14
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.10
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.62
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.57
whole body, neonate N06.CNhs10515.692-21D11.10
whole body, neonate N10.CNhs10518.761-6B40.70





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
central nervous system1.35e-4773
nervous system5.17e-4675
regional part of nervous system1.46e-4454
neural tube4.70e-4152
neural rod4.70e-4152
future spinal cord4.70e-4152
neural keel4.70e-4152
ectoderm-derived structure1.19e-3895
ectoderm1.19e-3895
presumptive ectoderm1.19e-3895
gray matter2.06e-3634
neurectoderm5.16e-3564
neural plate5.16e-3564
presumptive neural plate5.16e-3564
brain1.29e-3347
future brain1.29e-3347
regional part of brain4.28e-3246
ecto-epithelium4.88e-3173
brain grey matter4.39e-2929
regional part of telencephalon4.39e-2929
telencephalon4.39e-2929
anterior neural tube1.48e-2540
regional part of forebrain4.70e-2439
forebrain4.70e-2439
future forebrain4.70e-2439
structure with developmental contribution from neural crest2.11e-2292
pre-chordal neural plate6.09e-2149
regional part of cerebral cortex6.22e-2117
cerebral cortex2.29e-1821
cerebral hemisphere2.29e-1821
pallium2.29e-1821
posterior neural tube3.59e-1612
chordal neural plate3.59e-1612
occipital lobe6.39e-1510
visual cortex6.39e-1510
neocortex6.39e-1510
anatomical conduit2.36e-13122
tube3.57e-13114
basal ganglion5.06e-128
nuclear complex of neuraxis5.06e-128
aggregate regional part of brain5.06e-128
collection of basal ganglia5.06e-128
cerebral subcortex5.06e-128
organ system subdivision5.83e-12194
spinal cord3.53e-106
dorsal region element3.53e-106
dorsum3.53e-106
regional part of spinal cord1.92e-085
gray matter of spinal cord1.92e-085
regional part of midbrain3.47e-084
midbrain3.47e-084
presumptive midbrain3.47e-084
midbrain neural tube3.47e-084
segmental subdivision of hindbrain1.29e-076
segmental subdivision of nervous system1.29e-076
hindbrain1.29e-076
presumptive hindbrain1.29e-076
Ammon's horn1.35e-077
lobe parts of cerebral cortex1.35e-077
hippocampal formation1.35e-077
limbic system1.35e-077
limbic lobe1.35e-077
cell layer2.51e-07176
corpus striatum3.76e-075
striatum3.76e-075
ventral part of telencephalon3.76e-075
future corpus striatum3.76e-075
epithelium6.18e-07174
raphe nuclei9.78e-073
reticular formation9.78e-073
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