FFCP PHASE1:Mm9::chr6:115202185..115202221,-: Difference between revisions
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{{FFCP|EntrezGene=110595|HGNC=|MCL_coexpression_id=20|UniProt=Q9JHB3,Q3USH7|association_with_transcript=-318bp_to_ENSMUST00000032462,NM_080639,uc009dip.1,uc009diq.1_5end|description=CAGE_peak_3_at_Timp4_5end|id=chr6:115202185..115202221,-|ontology_enrichment_celltype=CL:0002319!4.44e-09!43;CL:0000221!1.03e-08!44;CL:0000133!1.03e-08!44;CL:0000055!7.42e-07!50|ontology_enrichment_celltype_v019_2=CL:0002319,4.00e-09,43;CL:0000117,6.23e-09,23;CL:0000337,6.23e-09,23;CL:0000221,7.68e-09,44;CL:0000133,7.68e-09,44;CL:0002610,1.66e-08,3;CL:0002614,5.02e-08,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!3.99e-28!73;UBERON:0005743!3.99e-28!73;UBERON:0000073!4.87e-28!75;UBERON:0001016!4.87e-28!75;UBERON:0001049!4.45e-23!52;UBERON:0005068!4.45e-23!52;UBERON:0006241!4.45e-23!52;UBERON:0007135!4.45e-23!52;UBERON:0000955!1.71e-21!50;UBERON:0006238!1.71e-21!50;UBERON:0002616!1.41e-20!49;UBERON:0004121!4.97e-18!102;UBERON:0000924!4.97e-18!102;UBERON:0006601!4.97e-18!102;UBERON:0002020!1.74e-17!34;UBERON:0000033!1.59e-16!63;UBERON:0002346!2.15e-16!71;UBERON:0003075!2.15e-16!71;UBERON:0007284!2.15e-16!71;UBERON:0003080!3.04e-13!40;UBERON:0002791!4.94e-13!29;UBERON:0003528!4.94e-13!29;UBERON:0001893!4.94e-13!29;UBERON:0002780!2.75e-12!39;UBERON:0001890!2.75e-12!39;UBERON:0006240!2.75e-12!39;UBERON:0003076!1.14e-11!12;UBERON:0003057!1.14e-11!12;UBERON:0002619!9.48e-11!17;UBERON:0002021!1.19e-10!10;UBERON:0000411!1.19e-10!10;UBERON:0001950!1.19e-10!10;UBERON:0003056!3.53e-10!49;UBERON:0000956!2.29e-09!21;UBERON:0001869!2.29e-09!21;UBERON:0000203!2.29e-09!21;UBERON:0007811!5.09e-09!86;UBERON:0002298!1.95e-08!6;UBERON:0000025!9.86e-08!114;UBERON:0002240!2.16e-07!6;UBERON:0005174!2.16e-07!6;UBERON:0001137!2.16e-07!6;UBERON:0000153!2.34e-07!94;UBERON:0004111!6.53e-07!122|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.41e-36,54;UBERON:0001017,6.13e-36,73;UBERON:0001016,8.74e-35,75;UBERON:0001049,1.21e-32,52;UBERON:0005068,1.21e-32,52;UBERON:0006241,1.21e-32,52;UBERON:0007135,1.21e-32,52;UBERON:0000955,5.85e-26,47;UBERON:0006238,5.85e-26,47;UBERON:0004121,6.58e-26,95;UBERON:0000924,6.58e-26,95;UBERON:0006601,6.58e-26,95;UBERON:0002346,2.81e-25,64;UBERON:0003075,2.81e-25,64;UBERON:0007284,2.81e-25,64;UBERON:0002616,2.15e-24,46;UBERON:0002020,1.29e-22,34;UBERON:0010371,2.42e-21,73;UBERON:0003076,2.93e-19,12;UBERON:0003057,2.93e-19,12;UBERON:0003080,1.19e-16,40;UBERON:0003528,1.43e-16,29;UBERON:0002791,1.43e-16,29;UBERON:0001893,1.43e-16,29;UBERON:0010314,1.46e-15,92;UBERON:0002780,4.84e-15,39;UBERON:0001890,4.84e-15,39;UBERON:0006240,4.84e-15,39;UBERON:0002021,4.58e-13,10;UBERON:0000411,4.58e-13,10;UBERON:0001950,4.58e-13,10;UBERON:0003056,8.97e-13,49;UBERON:0002619,2.69e-11,17;UBERON:0000025,2.80e-11,114;UBERON:0000956,9.52e-11,21;UBERON:0001869,9.52e-11,21;UBERON:0000203,9.52e-11,21;UBERON:0004733,1.38e-10,6;UBERON:0004732,1.38e-10,6;UBERON:0002028,1.38e-10,6;UBERON:0007277,1.38e-10,6;UBERON:0002950,1.97e-10,4;UBERON:0001891,1.97e-10,4;UBERON:0009616,1.97e-10,4;UBERON:0010286,1.97e-10,4;UBERON:0002240,3.54e-10,6;UBERON:0005174,3.54e-10,6;UBERON:0001137,3.54e-10,6;UBERON:0004111,4.15e-10,122;UBERON:0011216,8.15e-09,194;UBERON:0004684,1.66e-08,3;UBERON:0002275,1.66e-08,3;UBERON:0002038,5.02e-08,3;UBERON:0009663,5.02e-08,3;UBERON:0009661,5.02e-08,3;UBERON:0000125,5.02e-08,3;UBERON:0002308,5.02e-08,3;UBERON:0001948,6.30e-08,5;UBERON:0002315,6.30e-08,5;UBERON:0002420,2.97e-07,8;UBERON:0007245,2.97e-07,8;UBERON:0010009,2.97e-07,8;UBERON:0010011,2.97e-07,8;UBERON:0000454,2.97e-07,8|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36069264241712,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09012578190223,0.659058548203415,1.36100929351998,0.699932108126813,4.31257693094915,0,0,0,0,0,0,0,0.528990979272033,0,0.338844532069132,0,0,0,0,3.29560121570245,3.45796474789399,0,0,0,4.28476476605705,4.41737081903227,0,0,0,15.4162233399144,7.02280359468532,5.06901559745603,0.131886287730194,0,0,7.81712397203867,5.6276261003168,3.36156145108982,3.53554302568401,5.26775218956681,0.186399445825301,0,0.0755715601067855,0.289864488701678,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0.173485326766136,0,0,0,0,0,0,0,0,0.161766849947409,0,0,0,12.8823550685081,10.0534419270458,0,0,0,0,11.2342979553617,5.49000723382352,1.00523481690292,3.65031072403781,2.04572365864264,7.48036960414416,4.05603157669394,0,0,0,0,0,0,0,0,0,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.268273401399619,0.116765342367169,0,0,0,0,0,0.134206418760372,5.25724871410318,0.308713837137853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.559642479121,9.84578167374507,0,0.252470927204373,0,0.390438744296638,0,0,0,0,0,0.292255857911312,0,3.21321316421807,0.851640511249612,0,0,0.824850614862677,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0.129358683782755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.7546675166096,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56369293868419,0,0,0,0,0.168956125490778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,2.30162618253588,1.71868654031819,3.60891682921744,0.685082519770642,3.7769694869485,2.70009000092722,4.05289082901798,4.07828168085784,1.55328093525546,0,0,0.170733605754134,0,1.25767897576789,0,0.44449345560323,0,0,0,0.25347929989024,0.377252682772152,0.280924522409647,0.0640251524048693,0.17230640686684,0,0,0,0,0,0.342869252385415,0,0,0.436039249896986,0.282328141245992,0.0846146078916765,0.548783918618318,0,0,0,0,0.0985044823755635,0.409231043169689,0.619747364743864,0.578719832943424,0,0.233931608445408,0,0.57386499620653,0.220591419119515,0.695603506861264|short_description=p3@Timp4}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=110595 | |||
|HGNC= | |||
|MCL_coexpression_id=20 | |||
|TSSclassifier=NA | |||
|UniProt=Q9JHB3,Q3USH7 | |||
|association_with_transcript=-318bp_to_ENSMUST00000032462,NM_080639,uc009dip.1,uc009diq.1_5end | |||
|cluster_id=chr6:115202185..115202221,- | |||
|description=CAGE_peak_3_at_Timp4_5end | |||
|id=chr6:115202185..115202221,- | |||
|ontology_enrichment_celltype=CL:0002319!4.44e-09!43;CL:0000221!1.03e-08!44;CL:0000133!1.03e-08!44;CL:0000055!7.42e-07!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,4.00e-09,43;CL:0000117,6.23e-09,23;CL:0000337,6.23e-09,23;CL:0000221,7.68e-09,44;CL:0000133,7.68e-09,44;CL:0002610,1.66e-08,3;CL:0002614,5.02e-08,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!3.99e-28!73;UBERON:0005743!3.99e-28!73;UBERON:0000073!4.87e-28!75;UBERON:0001016!4.87e-28!75;UBERON:0001049!4.45e-23!52;UBERON:0005068!4.45e-23!52;UBERON:0006241!4.45e-23!52;UBERON:0007135!4.45e-23!52;UBERON:0000955!1.71e-21!50;UBERON:0006238!1.71e-21!50;UBERON:0002616!1.41e-20!49;UBERON:0004121!4.97e-18!102;UBERON:0000924!4.97e-18!102;UBERON:0006601!4.97e-18!102;UBERON:0002020!1.74e-17!34;UBERON:0000033!1.59e-16!63;UBERON:0002346!2.15e-16!71;UBERON:0003075!2.15e-16!71;UBERON:0007284!2.15e-16!71;UBERON:0003080!3.04e-13!40;UBERON:0002791!4.94e-13!29;UBERON:0003528!4.94e-13!29;UBERON:0001893!4.94e-13!29;UBERON:0002780!2.75e-12!39;UBERON:0001890!2.75e-12!39;UBERON:0006240!2.75e-12!39;UBERON:0003076!1.14e-11!12;UBERON:0003057!1.14e-11!12;UBERON:0002619!9.48e-11!17;UBERON:0002021!1.19e-10!10;UBERON:0000411!1.19e-10!10;UBERON:0001950!1.19e-10!10;UBERON:0003056!3.53e-10!49;UBERON:0000956!2.29e-09!21;UBERON:0001869!2.29e-09!21;UBERON:0000203!2.29e-09!21;UBERON:0007811!5.09e-09!86;UBERON:0002298!1.95e-08!6;UBERON:0000025!9.86e-08!114;UBERON:0002240!2.16e-07!6;UBERON:0005174!2.16e-07!6;UBERON:0001137!2.16e-07!6;UBERON:0000153!2.34e-07!94;UBERON:0004111!6.53e-07!122 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.41e-36,54;UBERON:0001017,6.13e-36,73;UBERON:0001016,8.74e-35,75;UBERON:0001049,1.21e-32,52;UBERON:0005068,1.21e-32,52;UBERON:0006241,1.21e-32,52;UBERON:0007135,1.21e-32,52;UBERON:0000955,5.85e-26,47;UBERON:0006238,5.85e-26,47;UBERON:0004121,6.58e-26,95;UBERON:0000924,6.58e-26,95;UBERON:0006601,6.58e-26,95;UBERON:0002346,2.81e-25,64;UBERON:0003075,2.81e-25,64;UBERON:0007284,2.81e-25,64;UBERON:0002616,2.15e-24,46;UBERON:0002020,1.29e-22,34;UBERON:0010371,2.42e-21,73;UBERON:0003076,2.93e-19,12;UBERON:0003057,2.93e-19,12;UBERON:0003080,1.19e-16,40;UBERON:0003528,1.43e-16,29;UBERON:0002791,1.43e-16,29;UBERON:0001893,1.43e-16,29;UBERON:0010314,1.46e-15,92;UBERON:0002780,4.84e-15,39;UBERON:0001890,4.84e-15,39;UBERON:0006240,4.84e-15,39;UBERON:0002021,4.58e-13,10;UBERON:0000411,4.58e-13,10;UBERON:0001950,4.58e-13,10;UBERON:0003056,8.97e-13,49;UBERON:0002619,2.69e-11,17;UBERON:0000025,2.80e-11,114;UBERON:0000956,9.52e-11,21;UBERON:0001869,9.52e-11,21;UBERON:0000203,9.52e-11,21;UBERON:0004733,1.38e-10,6;UBERON:0004732,1.38e-10,6;UBERON:0002028,1.38e-10,6;UBERON:0007277,1.38e-10,6;UBERON:0002950,1.97e-10,4;UBERON:0001891,1.97e-10,4;UBERON:0009616,1.97e-10,4;UBERON:0010286,1.97e-10,4;UBERON:0002240,3.54e-10,6;UBERON:0005174,3.54e-10,6;UBERON:0001137,3.54e-10,6;UBERON:0004111,4.15e-10,122;UBERON:0011216,8.15e-09,194;UBERON:0004684,1.66e-08,3;UBERON:0002275,1.66e-08,3;UBERON:0002038,5.02e-08,3;UBERON:0009663,5.02e-08,3;UBERON:0009661,5.02e-08,3;UBERON:0000125,5.02e-08,3;UBERON:0002308,5.02e-08,3;UBERON:0001948,6.30e-08,5;UBERON:0002315,6.30e-08,5;UBERON:0002420,2.97e-07,8;UBERON:0007245,2.97e-07,8;UBERON:0010009,2.97e-07,8;UBERON:0010011,2.97e-07,8;UBERON:0000454,2.97e-07,8 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36069264241712,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09012578190223,0.659058548203415,1.36100929351998,0.699932108126813,4.31257693094915,0,0,0,0,0,0,0,0.528990979272033,0,0.338844532069132,0,0,0,0,3.29560121570245,3.45796474789399,0,0,0,4.28476476605705,4.41737081903227,0,0,0,15.4162233399144,7.02280359468532,5.06901559745603,0.131886287730194,0,0,7.81712397203867,5.6276261003168,3.36156145108982,3.53554302568401,5.26775218956681,0.186399445825301,0,0.0755715601067855,0.289864488701678,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0.173485326766136,0,0,0,0,0,0,0,0,0.161766849947409,0,0,0,12.8823550685081,10.0534419270458,0,0,0,0,11.2342979553617,5.49000723382352,1.00523481690292,3.65031072403781,2.04572365864264,7.48036960414416,4.05603157669394,0,0,0,0,0,0,0,0,0,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.268273401399619,0.116765342367169,0,0,0,0,0,0.134206418760372,5.25724871410318,0.308713837137853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.559642479121,9.84578167374507,0,0.252470927204373,0,0.390438744296638,0,0,0,0,0,0.292255857911312,0,3.21321316421807,0.851640511249612,0,0,0.824850614862677,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0.129358683782755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.7546675166096,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56369293868419,0,0,0,0,0.168956125490778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,2.30162618253588,1.71868654031819,3.60891682921744,0.685082519770642,3.7769694869485,2.70009000092722,4.05289082901798,4.07828168085784,1.55328093525546,0,0,0.170733605754134,0,1.25767897576789,0,0.44449345560323,0,0,0,0.25347929989024,0.377252682772152,0.280924522409647,0.0640251524048693,0.17230640686684,0,0,0,0,0,0.342869252385415,0,0,0.436039249896986,0.282328141245992,0.0846146078916765,0.548783918618318,0,0,0,0,0.0985044823755635,0.409231043169689,0.619747364743864,0.578719832943424,0,0.233931608445408,0,0.57386499620653,0.220591419119515,0.695603506861264 | |||
|short_description=p3@Timp4 | |||
}} |
Latest revision as of 11:54, 26 September 2015
Short description: | p3@Timp4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Timp4_5end |
Coexpression cluster: | MCL_coexpression_mm9:20 |
Association with transcript: | -318bp_to_ENSMUST00000032462, NM_080639, uc009dip.1, uc009diq.1_5end |
EntrezGene: | Timp4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 4.00e-09 | 43 |
CNS neuron (sensu Vertebrata) | 6.23e-09 | 23 |
neuroblast (sensu Vertebrata) | 6.23e-09 | 23 |
ectodermal cell | 7.68e-09 | 44 |
neurectodermal cell | 7.68e-09 | 44 |
raphe nuclei neuron | 1.66e-08 | 3 |
neuron of the substantia nigra | 5.02e-08 | 3 |