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FFCP PHASE1:Mm9::chr7:31076790..31076798,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr7:31076790..31076798,+
|DHSsupport=NA
|short_description=p5@Clip3
|DPIdataset=NA
|description=CAGE_peak_5_at_Clip3_5end
|association_with_transcript=18bp_to_NM_001081114,uc009gea.1_5end
|EntrezGene=76686
|EntrezGene=76686
|HGNC=
|HGNC=
|MCL_coexpression_id=1330
|TSSclassifier=NA
|UniProt=B9EHT4
|UniProt=B9EHT4
|association_with_transcript=18bp_to_NM_001081114,uc009gea.1_5end
|cluster_id=chr7:31076790..31076798,+
|description=CAGE_peak_5_at_Clip3_5end
|id=chr7:31076790..31076798,+
|ontology_enrichment_celltype=CL:0000221!9.64e-18!44;CL:0000133!9.64e-18!44;CL:0002319!1.79e-17!43;CL:0000055!7.23e-15!50;CL:0000540!3.57e-13!33;CL:0000047!3.57e-13!33;CL:0000031!3.57e-13!33;CL:0000404!3.57e-13!33;CL:0000117!1.77e-12!23;CL:0000337!1.77e-12!23;CL:0000393!2.20e-11!39;CL:0000211!2.20e-11!39
|ontology_enrichment_celltype_v019_2=CL:0002319,1.66e-21,43;CL:0000221,7.55e-21,44;CL:0000133,7.55e-21,44;CL:0000117,2.61e-15,23;CL:0000337,2.61e-15,23;CL:0000540,1.63e-13,33;CL:0000047,1.63e-13,33;CL:0000031,1.63e-13,33;CL:0000404,1.63e-13,33;CL:0002453,3.15e-12,8;CL:0000393,1.12e-10,39;CL:0000211,1.12e-10,39;CL:0002321,1.90e-10,70;CL:0000333,1.80e-09,10;CL:0000095,1.80e-09,10;CL:0000243,1.80e-09,10;CL:0000123,1.80e-09,10;CL:0000125,1.80e-09,10;CL:0000030,1.80e-09,10;CL:0000339,1.80e-09,10;CL:0000128,7.26e-09,6;CL:0000126,7.26e-09,6;CL:0000127,7.26e-09,6
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!3.86e-37!73;UBERON:0005743!3.86e-37!73;UBERON:0000073!1.68e-36!75;UBERON:0001016!1.68e-36!75;UBERON:0004121!2.13e-30!102;UBERON:0000924!2.13e-30!102;UBERON:0006601!2.13e-30!102;UBERON:0001049!1.50e-28!52;UBERON:0005068!1.50e-28!52;UBERON:0006241!1.50e-28!52;UBERON:0007135!1.50e-28!52;UBERON:0000955!1.55e-27!50;UBERON:0006238!1.55e-27!50;UBERON:0002346!5.82e-27!71;UBERON:0003075!5.82e-27!71;UBERON:0007284!5.82e-27!71;UBERON:0000033!6.05e-27!63;UBERON:0002616!7.52e-27!49;UBERON:0003056!2.66e-21!49;UBERON:0002020!4.55e-21!34;UBERON:0003080!1.95e-20!40;UBERON:0002780!9.66e-20!39;UBERON:0001890!9.66e-20!39;UBERON:0006240!9.66e-20!39;UBERON:0002791!2.03e-18!29;UBERON:0003528!2.03e-18!29;UBERON:0001893!2.03e-18!29;UBERON:0000956!6.75e-14!21;UBERON:0001869!6.75e-14!21;UBERON:0000203!6.75e-14!21;UBERON:0007811!6.60e-13!86;UBERON:0000153!1.28e-12!94;UBERON:0002619!1.25e-11!17;UBERON:0003076!1.46e-08!12;UBERON:0003057!1.46e-08!12;UBERON:0002021!1.72e-08!10;UBERON:0000411!1.72e-08!10;UBERON:0001950!1.72e-08!10;UBERON:0000025!1.31e-07!114;UBERON:0004111!9.21e-07!122
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.46e-53,73;UBERON:0001016,8.14e-52,75;UBERON:0000073,4.65e-45,54;UBERON:0001049,2.14e-42,52;UBERON:0005068,2.14e-42,52;UBERON:0006241,2.14e-42,52;UBERON:0007135,2.14e-42,52;UBERON:0004121,3.58e-40,95;UBERON:0000924,3.58e-40,95;UBERON:0006601,3.58e-40,95;UBERON:0000955,1.14e-37,47;UBERON:0006238,1.14e-37,47;UBERON:0002616,3.05e-36,46;UBERON:0002020,3.79e-35,34;UBERON:0002346,2.19e-34,64;UBERON:0003075,2.19e-34,64;UBERON:0007284,2.19e-34,64;UBERON:0003528,3.78e-31,29;UBERON:0002791,3.78e-31,29;UBERON:0001893,3.78e-31,29;UBERON:0010371,7.73e-29,73;UBERON:0003080,3.12e-27,40;UBERON:0002780,8.04e-26,39;UBERON:0001890,8.04e-26,39;UBERON:0006240,8.04e-26,39;UBERON:0003056,1.83e-22,49;UBERON:0000956,6.57e-21,21;UBERON:0001869,6.57e-21,21;UBERON:0000203,6.57e-21,21;UBERON:0010314,1.05e-20,92;UBERON:0002619,5.57e-18,17;UBERON:0002021,1.34e-17,10;UBERON:0000411,1.34e-17,10;UBERON:0001950,1.34e-17,10;UBERON:0003076,1.64e-15,12;UBERON:0003057,1.64e-15,12;UBERON:0000025,1.01e-13,114;UBERON:0011216,1.36e-12,194;UBERON:0004111,3.66e-12,122;UBERON:0002420,2.88e-11,8;UBERON:0007245,2.88e-11,8;UBERON:0010009,2.88e-11,8;UBERON:0010011,2.88e-11,8;UBERON:0000454,2.88e-11,8;UBERON:0004733,1.41e-10,6;UBERON:0004732,1.41e-10,6;UBERON:0002028,1.41e-10,6;UBERON:0007277,1.41e-10,6;UBERON:0002037,1.40e-07,4;UBERON:0002680,1.40e-07,4;UBERON:0001895,1.40e-07,4;UBERON:0010092,1.40e-07,4;UBERON:0006215,1.40e-07,4;UBERON:0000369,2.87e-07,5;UBERON:0002435,2.87e-07,5;UBERON:0000204,2.87e-07,5;UBERON:0010082,2.87e-07,5;UBERON:0002950,4.92e-07,4;UBERON:0001891,4.92e-07,4;UBERON:0009616,4.92e-07,4;UBERON:0010286,4.92e-07,4
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503587271902309,0.202753862439029,0.734187008646726,3.9119567217402,1.09012578190223,1.97717564461025,2.91644848611425,1.53985063787899,2.87505128729943,0,0,0,0,0,0,1.61853168687678,1.05798195854407,0.633831403506179,0,0.889294796111139,0.449949858640699,1.97773272513395,0.7104801149461,5.09320187881288,6.91592949578798,0.933206510776299,2.29510095163874,2.3135745748652,1.71390590642282,3.09215957332259,0.61245399607477,0.958454710182364,0.919218786610021,1.10115880999389,4.59674417106676,3.99376986466233,1.18697658957174,1.18933936683133,1.56274011167028,3.35019598801657,2.25105044012672,3.0559649555362,1.76777151284201,2.27794689278565,0.745597783301202,0.075726193333184,0.151143120213571,0,0,0,0,0,0,0.280888840263504,0,0,0.35333957451034,0.563373679106722,0,0,0,0,0,0,0.22836775943812,0.258937883647172,0.148442139064825,0,0.913396434936424,0.230615497256059,0,0.470354828542819,0,0,0.144599356919912,0,0.161766849947409,0,0,0,12.8823550685081,11.9384622883669,0,0,0,0,3.59497534571574,4.11750542536764,1.7591609295801,5.21472960576829,2.55715457330331,4.98691306942944,4.70499662896497,0.81471491080253,0,0,0.210441855886474,0.260240885925407,0,0.720248519221397,0.60281927134286,0.884474488967262,0.2562274405697,0.749613796477831,1.81092359517311,0.431135985865684,0,0.703804496655795,0.219195732427575,0.556094498451196,0,0,0.199034266818493,0,0,0,0.207125772535502,0.234526059981096,0,0,0.196764231747404,0.154267112887378,0,0,0,0.16455984991348,0.164167464079095,0,0,0,0,2.52347938276953,2.26390147234426,0,0,0.426576501070468,0,0.128867461322093,0,0.22237804384487,0,0,0.329397909448022,0,0,0.19496408711912,0,0,0,0.569003702859245,0.228497025219458,1.1270773567308,0.407302655690628,0,0.280543279561274,0,0,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0.162964976442026,0.169745085775188,0.234690248288502,0.167506257441816,0,0.195133647857799,0.157635144106191,0.664394068946325,0.159454768657487,0,0,0,0,0,0,0,4.0137647496948,3.8679856575427,0,0.504941854408746,0,0.390438744296638,0.861693590931196,0.477937595905104,1.78238939265915,1.41538265394416,0.809621403349789,0,1.58115111178609,2.89189184779626,0.141940085208269,0,0.651547837414304,0.329940245945071,0,0.485561272309963,0,0.377210159511796,0,0.307435147943927,0,0,0,0,0,0,0,0.36012218806262,0.517434735131018,0.428674070063185,0.177340233642274,0.356737635204141,0.822745103010605,0.913394847343798,0,0,0.220528398054962,0,0.161464426695906,0.120625849856312,0.119372344003136,0,0,6.11903496634682,0.512612642393558,0.82554747185289,0.185194527369712,0,0.136694227721025,0,0,0,0,0.954670618015114,0.474503990371703,0,0.432021363287205,0.209088296014469,0.218362563746178,0,0.247960367176008,0,0,0,0,0.448549638131936,0.165458490457098,0.388902376688095,0.129159823477731,0.168956125490778,0.234714477291508,0.2604087696879,0.104859344425711,0,0.288030006257865,0,0.405450430580328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187682475451182,0,0,0,5.64751842617067,5.06357760157895,9.16632821503035,5.499301834998,3.42541259885321,3.0215755895588,5.40018000185445,5.85417564191487,3.17199686288943,4.14208249401456,0.103787347584177,0.399024873401031,0.512200817262403,0.243106717068294,0,0.735374033800057,0,0.412070114477788,0.320919209591815,0,0.25347929989024,0,0.280924522409647,0.256100609619477,0.287177344778066,0.952587382566147,0.115884325944855,0.578727661391115,0.824171801606613,0.294397840268795,0,0.887379030796687,0,0.290692833264657,0.282328141245992,0,0.365855945745545,0.263069711437843,0.679020569229309,0,0.355905054372522,0.197008964751127,0.818462086339379,0.154936841185966,0.192906610981141,0.999242311751784,0.233931608445408,0,0.57386499620653,0,0.231867835620421
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503587271902309,0.202753862439029,0.734187008646726,3.9119567217402,1.09012578190223,1.97717564461025,2.91644848611425,1.53985063787899,2.87505128729943,0,0,0,0,0,0,1.61853168687678,1.05798195854407,0.633831403506179,0,0.889294796111139,0.449949858640699,1.97773272513395,0.7104801149461,5.09320187881288,6.91592949578798,0.933206510776299,2.29510095163874,2.3135745748652,1.71390590642282,3.09215957332259,0.61245399607477,0.958454710182364,0.919218786610021,1.10115880999389,4.59674417106676,3.99376986466233,1.18697658957174,1.18933936683133,1.56274011167028,3.35019598801657,2.25105044012672,3.0559649555362,1.76777151284201,2.27794689278565,0.745597783301202,0.075726193333184,0.151143120213571,0,0,0,0,0,0,0.280888840263504,0,0,0.35333957451034,0.563373679106722,0,0,0,0,0,0,0.22836775943812,0.258937883647172,0.148442139064825,0,0.913396434936424,0.230615497256059,0,0.470354828542819,0,0,0.144599356919912,0,0.161766849947409,0,0,0,12.8823550685081,11.9384622883669,0,0,0,0,3.59497534571574,4.11750542536764,1.7591609295801,5.21472960576829,2.55715457330331,4.98691306942944,4.70499662896497,0.81471491080253,0,0,0.210441855886474,0.260240885925407,0,0.720248519221397,0.60281927134286,0.884474488967262,0.2562274405697,0.749613796477831,1.81092359517311,0.431135985865684,0,0.703804496655795,0.219195732427575,0.556094498451196,0,0,0.199034266818493,0,0,0,0.207125772535502,0.234526059981096,0,0,0.196764231747404,0.154267112887378,0,0,0,0.16455984991348,0.164167464079095,0,0,0,0,2.52347938276953,2.26390147234426,0,0,0.426576501070468,0,0.128867461322093,0,0.22237804384487,0,0,0.329397909448022,0,0,0.19496408711912,0,0,0,0.569003702859245,0.228497025219458,1.1270773567308,0.407302655690628,0,0.280543279561274,0,0,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0.162964976442026,0.169745085775188,0.234690248288502,0.167506257441816,0,0.195133647857799,0.157635144106191,0.664394068946325,0.159454768657487,0,0,0,0,0,0,0,4.0137647496948,3.8679856575427,0,0.504941854408746,0,0.390438744296638,0.861693590931196,0.477937595905104,1.78238939265915,1.41538265394416,0.809621403349789,0,1.58115111178609,2.89189184779626,0.141940085208269,0,0.651547837414304,0.329940245945071,0,0.485561272309963,0,0.377210159511796,0,0.307435147943927,0,0,0,0,0,0,0,0.36012218806262,0.517434735131018,0.428674070063185,0.177340233642274,0.356737635204141,0.822745103010605,0.913394847343798,0,0,0.220528398054962,0,0.161464426695906,0.120625849856312,0.119372344003136,0,0,6.11903496634682,0.512612642393558,0.82554747185289,0.185194527369712,0,0.136694227721025,0,0,0,0,0.954670618015114,0.474503990371703,0,0.432021363287205,0.209088296014469,0.218362563746178,0,0.247960367176008,0,0,0,0,0.448549638131936,0.165458490457098,0.388902376688095,0.129159823477731,0.168956125490778,0.234714477291508,0.2604087696879,0.104859344425711,0,0.288030006257865,0,0.405450430580328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187682475451182,0,0,0,5.64751842617067,5.06357760157895,9.16632821503035,5.499301834998,3.42541259885321,3.0215755895588,5.40018000185445,5.85417564191487,3.17199686288943,4.14208249401456,0.103787347584177,0.399024873401031,0.512200817262403,0.243106717068294,0,0.735374033800057,0,0.412070114477788,0.320919209591815,0,0.25347929989024,0,0.280924522409647,0.256100609619477,0.287177344778066,0.952587382566147,0.115884325944855,0.578727661391115,0.824171801606613,0.294397840268795,0,0.887379030796687,0,0.290692833264657,0.282328141245992,0,0.365855945745545,0.263069711437843,0.679020569229309,0,0.355905054372522,0.197008964751127,0.818462086339379,0.154936841185966,0.192906610981141,0.999242311751784,0.233931608445408,0,0.57386499620653,0,0.231867835620421
|short_description=p5@Clip3
}}
}}

Latest revision as of 14:20, 26 September 2015

Short description:p5@Clip3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_5_at_Clip3_5end
Coexpression cluster:MCL_coexpression_mm9:1330
Association with transcript: 18bp_to_NM_001081114, uc009gea.1_5end
EntrezGene:Clip3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p5@Clip3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.32
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.85
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.50
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.20
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.73
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B73.91
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.09
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.98
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C32.92
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.54
Mouse Astrocytes, donor3.CNhs12107.11633-122C42.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C31.62
Mouse Granule cells, donor2.CNhs12357.11731-123E31.06
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E71.98
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C85.09
Mouse Microglia, donor2.CNhs12634.11736-123E86.92
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.93
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.30
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.31
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D53.09
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.61
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.96
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F34.60
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D73.99
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.19
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.19
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.56
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E43.35
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.25
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.06
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.77
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.28
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.75
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.15
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.56
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.23
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.91
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.47
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B212.88
cerebellum, neonate N30.CNhs11135.1395-42I211.94
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A43.59
corpus striatum, adult.CNhs10487.19-21D84.12
corpus striatum, neonate N00.CNhs11226.630-43F11.76
cortex, adult.CNhs10473.12-14D55.21
cortex, neonate N30.CNhs11107.1392-42F22.56
diencephalon, adult.CNhs10482.20-12F24.99
diencephalon, neonate N30.CNhs11201.1388-42B24.70
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.81
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C60.26
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.72
eyeball, embryo E17.CNhs11023.1261-18D40.60
eyeball, neonate N00.CNhs11207.633-15C60.88
eyeball, neonate N01.CNhs11140.1532-43E70.26
eyeball, neonate N02.CNhs11205.1551-44G80.75
eyeball, neonate N16.CNhs11188.777-19A21.81
forelimb, embryo E11.CNhs10596.335-25E20.43
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.70
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E82.52
hippocampus, neonate N00.CNhs11228.627-43G12.26
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.57
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.28
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.66
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C24.01
medulla oblongata, neonate N30.CNhs11200.1396-42A33.87
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.50
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.86
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.48
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.78
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.42
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.58
olfactory brain, adult.CNhs10489.18-22I92.89
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.65
oviduct, adult pregnant day01.CNhs10500.988-6G60.33
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C70.52
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.36
pituitary gland, embryo E17.CNhs11039.1265-44F50.82
pituitary gland, neonate N00.CNhs11190.1308-22E90.91
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.12
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C96.12
spleen, adult.CNhs10465.25-2G20.51
spleen, embryo E16.CNhs11035.461-43C10.83
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.47
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.43
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.25
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.45
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.39
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.23
testis, neonate N07.CNhs11222.726-26I40.26
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A15.65
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A25.06
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A39.17
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D75.50
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A43.43
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.02
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A65.40
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A75.85
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A83.17
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A94.14
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.51
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.74
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.68
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.36
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.20
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.15
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I51.00
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.00
whole body, neonate N01.CNhs10576.659-23C60.57
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
central nervous system1.46e-5373
nervous system8.14e-5275
regional part of nervous system4.65e-4554
neural tube2.14e-4252
neural rod2.14e-4252
future spinal cord2.14e-4252
neural keel2.14e-4252
ectoderm-derived structure3.58e-4095
ectoderm3.58e-4095
presumptive ectoderm3.58e-4095
brain1.14e-3747
future brain1.14e-3747
regional part of brain3.05e-3646
gray matter3.79e-3534
neurectoderm2.19e-3464
neural plate2.19e-3464
presumptive neural plate2.19e-3464
brain grey matter3.78e-3129
regional part of telencephalon3.78e-3129
telencephalon3.78e-3129
ecto-epithelium7.73e-2973
anterior neural tube3.12e-2740
regional part of forebrain8.04e-2639
forebrain8.04e-2639
future forebrain8.04e-2639
pre-chordal neural plate1.83e-2249
cerebral cortex6.57e-2121
cerebral hemisphere6.57e-2121
pallium6.57e-2121
structure with developmental contribution from neural crest1.05e-2092
regional part of cerebral cortex5.57e-1817
occipital lobe1.34e-1710
visual cortex1.34e-1710
neocortex1.34e-1710
posterior neural tube1.64e-1512
chordal neural plate1.64e-1512
tube1.01e-13114
organ system subdivision1.36e-12194
anatomical conduit3.66e-12122
basal ganglion2.88e-118
nuclear complex of neuraxis2.88e-118
aggregate regional part of brain2.88e-118
collection of basal ganglia2.88e-118
cerebral subcortex2.88e-118
segmental subdivision of hindbrain1.41e-106
segmental subdivision of nervous system1.41e-106
hindbrain1.41e-106
presumptive hindbrain1.41e-106
cerebellum1.40e-074
regional part of metencephalon1.40e-074
metencephalon1.40e-074
future metencephalon1.40e-074
rhombic lip1.40e-074
corpus striatum2.87e-075
striatum2.87e-075
ventral part of telencephalon2.87e-075
future corpus striatum2.87e-075
regional part of midbrain4.92e-074
midbrain4.92e-074
presumptive midbrain4.92e-074
midbrain neural tube4.92e-074
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