FFCP PHASE1:Mm9::chr7:31076960..31076987,+: Difference between revisions
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{{FFCP|EntrezGene=76686|HGNC=|MCL_coexpression_id=1330|UniProt=D3Z2W8|association_with_transcript=0bp_to_ENSMUST00000144508_5end|description=CAGE_peak_4_at_Clip3_5end|id=chr7:31076960..31076987,+|ontology_enrichment_celltype=CL:0000221!4.92e-17!44;CL:0000133!4.92e-17!44;CL:0002319!7.36e-17!43;CL:0000055!1.17e-15!50;CL:0000540!1.95e-12!33;CL:0000047!1.95e-12!33;CL:0000031!1.95e-12!33;CL:0000404!1.95e-12!33;CL:0000117!4.12e-12!23;CL:0000337!4.12e-12!23;CL:0000393!5.15e-12!39;CL:0000211!5.15e-12!39|ontology_enrichment_celltype_v019_2=CL:0002319,2.09e-27,43;CL:0000221,1.43e-26,44;CL:0000133,1.43e-26,44;CL:0000540,9.22e-21,33;CL:0000047,9.22e-21,33;CL:0000031,9.22e-21,33;CL:0000404,9.22e-21,33;CL:0000117,9.82e-21,23;CL:0000337,9.82e-21,23;CL:0000393,4.94e-18,39;CL:0000211,4.94e-18,39;CL:0002321,2.03e-14,70;CL:0002453,1.49e-09,8;CL:0000333,2.35e-07,10;CL:0000095,2.35e-07,10;CL:0000243,2.35e-07,10;CL:0000123,2.35e-07,10;CL:0000125,2.35e-07,10;CL:0000030,2.35e-07,10;CL:0000339,2.35e-07,10|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.39e-33!73;UBERON:0005743!1.39e-33!73;UBERON:0000073!3.39e-33!75;UBERON:0001016!3.39e-33!75;UBERON:0001049!2.28e-28!52;UBERON:0005068!2.28e-28!52;UBERON:0006241!2.28e-28!52;UBERON:0007135!2.28e-28!52;UBERON:0004121!4.73e-27!102;UBERON:0000924!4.73e-27!102;UBERON:0006601!4.73e-27!102;UBERON:0002616!1.66e-26!49;UBERON:0000955!1.69e-26!50;UBERON:0006238!1.69e-26!50;UBERON:0000033!1.20e-25!63;UBERON:0002346!1.48e-25!71;UBERON:0003075!1.48e-25!71;UBERON:0007284!1.48e-25!71;UBERON:0002020!2.71e-21!34;UBERON:0003056!2.93e-20!49;UBERON:0003080!6.15e-20!40;UBERON:0002780!1.48e-19!39;UBERON:0001890!1.48e-19!39;UBERON:0006240!1.48e-19!39;UBERON:0002791!1.74e-18!29;UBERON:0003528!1.74e-18!29;UBERON:0001893!1.74e-18!29;UBERON:0000956!1.68e-13!21;UBERON:0001869!1.68e-13!21;UBERON:0000203!1.68e-13!21;UBERON:0007811!8.91e-12!86;UBERON:0002619!3.41e-11!17;UBERON:0000153!4.50e-11!94;UBERON:0003076!6.35e-09!12;UBERON:0003057!6.35e-09!12;UBERON:0000025!4.20e-08!114;UBERON:0002021!3.83e-07!10;UBERON:0000411!3.83e-07!10;UBERON:0001950!3.83e-07!10;UBERON:0004111!5.73e-07!122|ontology_enrichment_uberon_v019_2=UBERON:0001017,7.33e-51,73;UBERON:0001016,3.91e-49,75;UBERON:0000073,2.16e-46,54;UBERON:0001049,6.12e-44,52;UBERON:0005068,6.12e-44,52;UBERON:0006241,6.12e-44,52;UBERON:0007135,6.12e-44,52;UBERON:0002346,1.33e-40,64;UBERON:0003075,1.33e-40,64;UBERON:0007284,1.33e-40,64;UBERON:0004121,1.62e-40,95;UBERON:0000924,1.62e-40,95;UBERON:0006601,1.62e-40,95;UBERON:0002020,9.68e-39,34;UBERON:0002616,2.73e-36,46;UBERON:0000955,2.74e-35,47;UBERON:0006238,2.74e-35,47;UBERON:0010371,5.01e-34,73;UBERON:0003528,6.88e-33,29;UBERON:0002791,6.88e-33,29;UBERON:0001893,6.88e-33,29;UBERON:0002780,1.71e-28,39;UBERON:0001890,1.71e-28,39;UBERON:0006240,1.71e-28,39;UBERON:0003080,1.48e-27,40;UBERON:0003056,1.77e-25,49;UBERON:0010314,2.20e-24,92;UBERON:0000956,1.38e-22,21;UBERON:0001869,1.38e-22,21;UBERON:0000203,1.38e-22,21;UBERON:0002619,7.80e-18,17;UBERON:0003076,6.89e-17,12;UBERON:0003057,6.89e-17,12;UBERON:0000025,1.60e-14,114;UBERON:0004111,8.27e-13,122;UBERON:0002021,1.52e-11,10;UBERON:0000411,1.52e-11,10;UBERON:0001950,1.52e-11,10;UBERON:0002420,3.12e-11,8;UBERON:0007245,3.12e-11,8;UBERON:0010009,3.12e-11,8;UBERON:0010011,3.12e-11,8;UBERON:0000454,3.12e-11,8;UBERON:0011216,4.12e-11,194;UBERON:0004733,3.55e-10,6;UBERON:0004732,3.55e-10,6;UBERON:0002028,3.55e-10,6;UBERON:0007277,3.55e-10,6;UBERON:0002240,2.78e-08,6;UBERON:0005174,2.78e-08,6;UBERON:0001137,2.78e-08,6;UBERON:0000483,8.98e-08,174;UBERON:0001954,1.03e-07,7;UBERON:0003022,1.03e-07,7;UBERON:0002421,1.03e-07,7;UBERON:0000349,1.03e-07,7;UBERON:0002600,1.03e-07,7;UBERON:0000119,1.50e-07,176;UBERON:0002037,2.37e-07,4;UBERON:0002680,2.37e-07,4;UBERON:0001895,2.37e-07,4;UBERON:0010092,2.37e-07,4;UBERON:0006215,2.37e-07,4;UBERON:0000369,3.81e-07,5;UBERON:0002435,3.81e-07,5;UBERON:0000204,3.81e-07,5;UBERON:0010082,3.81e-07,5;UBERON:0001948,8.60e-07,5;UBERON:0002315,8.60e-07,5|phase1_expression=0.960893082628764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.765389611359628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.629484089877886,0.709638518536602,1.65192076945513,3.9119567217402,2.18025156380447,9.66619204031676,4.47188767870852,0.419959264876088,1.43752564364972,0,0,0,0,0.286533439938757,0,1.82084814773638,0.528990979272033,0,0.338844532069132,0.889294796111139,0,0,0,4.49400165777607,7.68436610643109,1.97010263386108,1.89008313664367,2.73422449756797,2.57085885963423,2.42955395046775,1.34739879136449,2.01275489138296,0.919218786610021,1.10115880999389,2.93680877595932,3.99376986466233,1.84640802822271,1.82975287204819,2.6045668527838,3.62937898701795,3.93933827022176,2.90316670775939,1.47314292736834,1.70846016958924,1.3047961207771,0.151452386666368,0.226714680320357,0,0,0,0,0,0,0,0,0,0,0.422530259330042,0,0,0,0,0,0,0.11418387971906,0.517875767294343,0,0.346970653532272,0,0,0.301445281105245,0.470354828542819,0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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=76686 | |||
|HGNC= | |||
|MCL_coexpression_id=1330 | |||
|TSSclassifier=NA | |||
|UniProt=D3Z2W8 | |||
|association_with_transcript=0bp_to_ENSMUST00000144508_5end | |||
|cluster_id=chr7:31076960..31076987,+ | |||
|description=CAGE_peak_4_at_Clip3_5end | |||
|id=chr7:31076960..31076987,+ | |||
|ontology_enrichment_celltype=CL:0000221!4.92e-17!44;CL:0000133!4.92e-17!44;CL:0002319!7.36e-17!43;CL:0000055!1.17e-15!50;CL:0000540!1.95e-12!33;CL:0000047!1.95e-12!33;CL:0000031!1.95e-12!33;CL:0000404!1.95e-12!33;CL:0000117!4.12e-12!23;CL:0000337!4.12e-12!23;CL:0000393!5.15e-12!39;CL:0000211!5.15e-12!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,2.09e-27,43;CL:0000221,1.43e-26,44;CL:0000133,1.43e-26,44;CL:0000540,9.22e-21,33;CL:0000047,9.22e-21,33;CL:0000031,9.22e-21,33;CL:0000404,9.22e-21,33;CL:0000117,9.82e-21,23;CL:0000337,9.82e-21,23;CL:0000393,4.94e-18,39;CL:0000211,4.94e-18,39;CL:0002321,2.03e-14,70;CL:0002453,1.49e-09,8;CL:0000333,2.35e-07,10;CL:0000095,2.35e-07,10;CL:0000243,2.35e-07,10;CL:0000123,2.35e-07,10;CL:0000125,2.35e-07,10;CL:0000030,2.35e-07,10;CL:0000339,2.35e-07,10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.39e-33!73;UBERON:0005743!1.39e-33!73;UBERON:0000073!3.39e-33!75;UBERON:0001016!3.39e-33!75;UBERON:0001049!2.28e-28!52;UBERON:0005068!2.28e-28!52;UBERON:0006241!2.28e-28!52;UBERON:0007135!2.28e-28!52;UBERON:0004121!4.73e-27!102;UBERON:0000924!4.73e-27!102;UBERON:0006601!4.73e-27!102;UBERON:0002616!1.66e-26!49;UBERON:0000955!1.69e-26!50;UBERON:0006238!1.69e-26!50;UBERON:0000033!1.20e-25!63;UBERON:0002346!1.48e-25!71;UBERON:0003075!1.48e-25!71;UBERON:0007284!1.48e-25!71;UBERON:0002020!2.71e-21!34;UBERON:0003056!2.93e-20!49;UBERON:0003080!6.15e-20!40;UBERON:0002780!1.48e-19!39;UBERON:0001890!1.48e-19!39;UBERON:0006240!1.48e-19!39;UBERON:0002791!1.74e-18!29;UBERON:0003528!1.74e-18!29;UBERON:0001893!1.74e-18!29;UBERON:0000956!1.68e-13!21;UBERON:0001869!1.68e-13!21;UBERON:0000203!1.68e-13!21;UBERON:0007811!8.91e-12!86;UBERON:0002619!3.41e-11!17;UBERON:0000153!4.50e-11!94;UBERON:0003076!6.35e-09!12;UBERON:0003057!6.35e-09!12;UBERON:0000025!4.20e-08!114;UBERON:0002021!3.83e-07!10;UBERON:0000411!3.83e-07!10;UBERON:0001950!3.83e-07!10;UBERON:0004111!5.73e-07!122 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,7.33e-51,73;UBERON:0001016,3.91e-49,75;UBERON:0000073,2.16e-46,54;UBERON:0001049,6.12e-44,52;UBERON:0005068,6.12e-44,52;UBERON:0006241,6.12e-44,52;UBERON:0007135,6.12e-44,52;UBERON:0002346,1.33e-40,64;UBERON:0003075,1.33e-40,64;UBERON:0007284,1.33e-40,64;UBERON:0004121,1.62e-40,95;UBERON:0000924,1.62e-40,95;UBERON:0006601,1.62e-40,95;UBERON:0002020,9.68e-39,34;UBERON:0002616,2.73e-36,46;UBERON:0000955,2.74e-35,47;UBERON:0006238,2.74e-35,47;UBERON:0010371,5.01e-34,73;UBERON:0003528,6.88e-33,29;UBERON:0002791,6.88e-33,29;UBERON:0001893,6.88e-33,29;UBERON:0002780,1.71e-28,39;UBERON:0001890,1.71e-28,39;UBERON:0006240,1.71e-28,39;UBERON:0003080,1.48e-27,40;UBERON:0003056,1.77e-25,49;UBERON:0010314,2.20e-24,92;UBERON:0000956,1.38e-22,21;UBERON:0001869,1.38e-22,21;UBERON:0000203,1.38e-22,21;UBERON:0002619,7.80e-18,17;UBERON:0003076,6.89e-17,12;UBERON:0003057,6.89e-17,12;UBERON:0000025,1.60e-14,114;UBERON:0004111,8.27e-13,122;UBERON:0002021,1.52e-11,10;UBERON:0000411,1.52e-11,10;UBERON:0001950,1.52e-11,10;UBERON:0002420,3.12e-11,8;UBERON:0007245,3.12e-11,8;UBERON:0010009,3.12e-11,8;UBERON:0010011,3.12e-11,8;UBERON:0000454,3.12e-11,8;UBERON:0011216,4.12e-11,194;UBERON:0004733,3.55e-10,6;UBERON:0004732,3.55e-10,6;UBERON:0002028,3.55e-10,6;UBERON:0007277,3.55e-10,6;UBERON:0002240,2.78e-08,6;UBERON:0005174,2.78e-08,6;UBERON:0001137,2.78e-08,6;UBERON:0000483,8.98e-08,174;UBERON:0001954,1.03e-07,7;UBERON:0003022,1.03e-07,7;UBERON:0002421,1.03e-07,7;UBERON:0000349,1.03e-07,7;UBERON:0002600,1.03e-07,7;UBERON:0000119,1.50e-07,176;UBERON:0002037,2.37e-07,4;UBERON:0002680,2.37e-07,4;UBERON:0001895,2.37e-07,4;UBERON:0010092,2.37e-07,4;UBERON:0006215,2.37e-07,4;UBERON:0000369,3.81e-07,5;UBERON:0002435,3.81e-07,5;UBERON:0000204,3.81e-07,5;UBERON:0010082,3.81e-07,5;UBERON:0001948,8.60e-07,5;UBERON:0002315,8.60e-07,5 | |||
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|short_description=p4@Clip3 | |||
}} |
Latest revision as of 14:21, 26 September 2015
Short description: | p4@Clip3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Clip3_5end |
Coexpression cluster: | MCL_coexpression_mm9:1330 |
Association with transcript: | 0bp_to_ENSMUST00000144508_5end |
EntrezGene: | Clip3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 2.09e-27 | 43 |
ectodermal cell | 1.43e-26 | 44 |
neurectodermal cell | 1.43e-26 | 44 |
neuron | 9.22e-21 | 33 |
neuronal stem cell | 9.22e-21 | 33 |
neuroblast | 9.22e-21 | 33 |
electrically signaling cell | 9.22e-21 | 33 |
CNS neuron (sensu Vertebrata) | 9.82e-21 | 23 |
neuroblast (sensu Vertebrata) | 9.82e-21 | 23 |
electrically responsive cell | 4.94e-18 | 39 |
electrically active cell | 4.94e-18 | 39 |
embryonic cell | 2.03e-14 | 70 |
oligodendrocyte precursor cell | 1.49e-09 | 8 |
migratory neural crest cell | 2.35e-07 | 10 |
neuron associated cell | 2.35e-07 | 10 |
glial cell (sensu Vertebrata) | 2.35e-07 | 10 |
neuron associated cell (sensu Vertebrata) | 2.35e-07 | 10 |
glial cell | 2.35e-07 | 10 |
glioblast | 2.35e-07 | 10 |
glioblast (sensu Vertebrata) | 2.35e-07 | 10 |