FFCP PHASE1:Mm9::chr16:20629872..20629910,+: Difference between revisions
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{{FFCP|EntrezGene=107522|HGNC=|MCL_coexpression_id=20|UniProt=B2RQR8|association_with_transcript=0bp_to_ENSMUST00000003898_5end|description=CAGE_peak_3_at_Ece2_5end|id=chr16:20629872..20629910,+|ontology_enrichment_celltype=CL:0000117!1.35e-09!23;CL:0000337!1.35e-09!23;CL:0000055!1.79e-09!50;CL:0002319!3.23e-09!43;CL:0000221!6.01e-09!44;CL:0000133!6.01e-09!44;CL:0000393!1.66e-07!39;CL:0000211!1.66e-07!39|ontology_enrichment_celltype_v019_2=CL:0000117,1.18e-15,23;CL:0000337,1.18e-15,23;CL:0002319,4.54e-13,43;CL:0000221,1.40e-12,44;CL:0000133,1.40e-12,44;CL:0000540,4.74e-09,33;CL:0000047,4.74e-09,33;CL:0000031,4.74e-09,33;CL:0000404,4.74e-09,33;CL:0000393,1.20e-07,39;CL:0000211,1.20e-07,39;CL:0002453,5.00e-07,8;CL:0002321,5.48e-07,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!6.36e-22!73;UBERON:0005743!6.36e-22!73;UBERON:0001049!1.30e-21!52;UBERON:0005068!1.30e-21!52;UBERON:0006241!1.30e-21!52;UBERON:0007135!1.30e-21!52;UBERON:0000073!1.33e-21!75;UBERON:0001016!1.33e-21!75;UBERON:0000955!7.21e-21!50;UBERON:0006238!7.21e-21!50;UBERON:0002346!1.44e-20!71;UBERON:0003075!1.44e-20!71;UBERON:0007284!1.44e-20!71;UBERON:0004121!3.57e-20!102;UBERON:0000924!3.57e-20!102;UBERON:0006601!3.57e-20!102;UBERON:0002616!4.07e-20!49;UBERON:0000033!1.13e-17!63;UBERON:0002020!1.56e-16!34;UBERON:0003080!3.25e-14!40;UBERON:0002791!9.20e-14!29;UBERON:0003528!9.20e-14!29;UBERON:0001893!9.20e-14!29;UBERON:0002780!1.63e-13!39;UBERON:0001890!1.63e-13!39;UBERON:0006240!1.63e-13!39;UBERON:0003056!3.79e-13!49;UBERON:0000956!4.24e-09!21;UBERON:0001869!4.24e-09!21;UBERON:0000203!4.24e-09!21;UBERON:0000153!6.98e-09!94;UBERON:0007811!1.98e-08!86;UBERON:0003076!2.11e-08!12;UBERON:0003057!2.11e-08!12;UBERON:0002619!1.39e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.20e-35,54;UBERON:0001017,6.50e-33,73;UBERON:0001049,7.01e-33,52;UBERON:0005068,7.01e-33,52;UBERON:0006241,7.01e-33,52;UBERON:0007135,7.01e-33,52;UBERON:0001016,1.39e-31,75;UBERON:0000955,5.85e-28,47;UBERON:0006238,5.85e-28,47;UBERON:0002020,4.96e-27,34;UBERON:0002616,1.01e-26,46;UBERON:0002346,1.39e-26,64;UBERON:0003075,1.39e-26,64;UBERON:0007284,1.39e-26,64;UBERON:0004121,1.71e-23,95;UBERON:0000924,1.71e-23,95;UBERON:0006601,1.71e-23,95;UBERON:0003528,3.37e-22,29;UBERON:0002791,3.37e-22,29;UBERON:0001893,3.37e-22,29;UBERON:0010371,1.67e-21,73;UBERON:0003080,2.30e-20,40;UBERON:0002780,3.36e-19,39;UBERON:0001890,3.36e-19,39;UBERON:0006240,3.36e-19,39;UBERON:0003056,5.16e-17,49;UBERON:0010314,6.80e-17,92;UBERON:0000956,4.12e-14,21;UBERON:0001869,4.12e-14,21;UBERON:0000203,4.12e-14,21;UBERON:0003076,1.70e-13,12;UBERON:0003057,1.70e-13,12;UBERON:0002619,1.75e-11,17;UBERON:0000025,1.63e-09,114;UBERON:0002420,1.73e-09,8;UBERON:0007245,1.73e-09,8;UBERON:0010009,1.73e-09,8;UBERON:0010011,1.73e-09,8;UBERON:0000454,1.73e-09,8;UBERON:0002021,5.19e-09,10;UBERON:0000411,5.19e-09,10;UBERON:0001950,5.19e-09,10;UBERON:0004111,4.59e-08,122;UBERON:0004733,7.21e-08,6;UBERON:0004732,7.21e-08,6;UBERON:0002028,7.21e-08,6;UBERON:0007277,7.21e-08,6;UBERON:0002240,3.74e-07,6;UBERON:0005174,3.74e-07,6;UBERON:0001137,3.74e-07,6|phase1_expression=0.640595388419176,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.765389611359628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.629484089877886,0.405507724878058,0.734187008646726,3.12956537739216,3.70642765846759,3.29529274101708,5.05517737593137,2.65974201088189,0,0,0,0,0.514518872071894,1.71920063963254,0.515672092277442,1.01158230429799,2.64495489636016,0,1.35537812827653,2.66788438833342,0,0,0,2.09720077362883,4.99483796918021,1.34796496001021,1.4850653216486,1.05162480675691,2.85650984403804,4.19650227808066,0.857435594504678,2.30029130443767,0,4.40463523997555,6.51205424234457,7.0659005297872,2.1101806036831,2.28719109006024,1.56274011167028,8.09630697104005,7.31591393041184,10.5430790965999,2.65165726926301,2.98980529678116,1.86399445825301,0.075726193333184,0.529000920747499,0,0,0,0,0,0,0.280888840263504,3.57903677413921,3.63700406444016,6.71345191569646,0.14084341977668,2.56652954828636,2.54805239706646,0,0,0,0,0.22836775943812,0,2.82040064223167,0.867426633830679,0.913396434936424,0.461230994512117,0.60289056221049,0.940709657085638,1.0053327306374,0,0.144599356919912,0,1.29413479957927,0.441683036920787,0,0,5.85561594023094,3.56059401582874,0.255457055208591,0,0,0.127070227073065,8.23848516726525,4.11750542536764,4.14659361972453,3.30266208365325,3.58001640262463,6.02585329222724,6.16516799657479,0.203678727700633,0.124406970610093,0,0.210441855886474,0.130120442962704,0,0.360124259610698,0.452114453507145,1.02054748726992,0.384341160854549,0.281105173679186,1.81092359517311,0,0.567318240503458,1.23165786914764,0.876782929710299,0.556094498451196,1.0447564995665,0.823128545631774,0,0,0,0,0.414251545071004,0.234526059981096,0,0.23674473558521,0.590292695242212,0.154267112887378,0,0.268273401399619,0,0.16455984991348,0,0.243206428637567,0.292399974850665,0.439100230582101,0.134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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=107522 | |||
|HGNC= | |||
|MCL_coexpression_id=20 | |||
|TSSclassifier=NA | |||
|UniProt=B2RQR8 | |||
|association_with_transcript=0bp_to_ENSMUST00000003898_5end | |||
|cluster_id=chr16:20629872..20629910,+ | |||
|description=CAGE_peak_3_at_Ece2_5end | |||
|id=chr16:20629872..20629910,+ | |||
|ontology_enrichment_celltype=CL:0000117!1.35e-09!23;CL:0000337!1.35e-09!23;CL:0000055!1.79e-09!50;CL:0002319!3.23e-09!43;CL:0000221!6.01e-09!44;CL:0000133!6.01e-09!44;CL:0000393!1.66e-07!39;CL:0000211!1.66e-07!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.18e-15,23;CL:0000337,1.18e-15,23;CL:0002319,4.54e-13,43;CL:0000221,1.40e-12,44;CL:0000133,1.40e-12,44;CL:0000540,4.74e-09,33;CL:0000047,4.74e-09,33;CL:0000031,4.74e-09,33;CL:0000404,4.74e-09,33;CL:0000393,1.20e-07,39;CL:0000211,1.20e-07,39;CL:0002453,5.00e-07,8;CL:0002321,5.48e-07,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!6.36e-22!73;UBERON:0005743!6.36e-22!73;UBERON:0001049!1.30e-21!52;UBERON:0005068!1.30e-21!52;UBERON:0006241!1.30e-21!52;UBERON:0007135!1.30e-21!52;UBERON:0000073!1.33e-21!75;UBERON:0001016!1.33e-21!75;UBERON:0000955!7.21e-21!50;UBERON:0006238!7.21e-21!50;UBERON:0002346!1.44e-20!71;UBERON:0003075!1.44e-20!71;UBERON:0007284!1.44e-20!71;UBERON:0004121!3.57e-20!102;UBERON:0000924!3.57e-20!102;UBERON:0006601!3.57e-20!102;UBERON:0002616!4.07e-20!49;UBERON:0000033!1.13e-17!63;UBERON:0002020!1.56e-16!34;UBERON:0003080!3.25e-14!40;UBERON:0002791!9.20e-14!29;UBERON:0003528!9.20e-14!29;UBERON:0001893!9.20e-14!29;UBERON:0002780!1.63e-13!39;UBERON:0001890!1.63e-13!39;UBERON:0006240!1.63e-13!39;UBERON:0003056!3.79e-13!49;UBERON:0000956!4.24e-09!21;UBERON:0001869!4.24e-09!21;UBERON:0000203!4.24e-09!21;UBERON:0000153!6.98e-09!94;UBERON:0007811!1.98e-08!86;UBERON:0003076!2.11e-08!12;UBERON:0003057!2.11e-08!12;UBERON:0002619!1.39e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.20e-35,54;UBERON:0001017,6.50e-33,73;UBERON:0001049,7.01e-33,52;UBERON:0005068,7.01e-33,52;UBERON:0006241,7.01e-33,52;UBERON:0007135,7.01e-33,52;UBERON:0001016,1.39e-31,75;UBERON:0000955,5.85e-28,47;UBERON:0006238,5.85e-28,47;UBERON:0002020,4.96e-27,34;UBERON:0002616,1.01e-26,46;UBERON:0002346,1.39e-26,64;UBERON:0003075,1.39e-26,64;UBERON:0007284,1.39e-26,64;UBERON:0004121,1.71e-23,95;UBERON:0000924,1.71e-23,95;UBERON:0006601,1.71e-23,95;UBERON:0003528,3.37e-22,29;UBERON:0002791,3.37e-22,29;UBERON:0001893,3.37e-22,29;UBERON:0010371,1.67e-21,73;UBERON:0003080,2.30e-20,40;UBERON:0002780,3.36e-19,39;UBERON:0001890,3.36e-19,39;UBERON:0006240,3.36e-19,39;UBERON:0003056,5.16e-17,49;UBERON:0010314,6.80e-17,92;UBERON:0000956,4.12e-14,21;UBERON:0001869,4.12e-14,21;UBERON:0000203,4.12e-14,21;UBERON:0003076,1.70e-13,12;UBERON:0003057,1.70e-13,12;UBERON:0002619,1.75e-11,17;UBERON:0000025,1.63e-09,114;UBERON:0002420,1.73e-09,8;UBERON:0007245,1.73e-09,8;UBERON:0010009,1.73e-09,8;UBERON:0010011,1.73e-09,8;UBERON:0000454,1.73e-09,8;UBERON:0002021,5.19e-09,10;UBERON:0000411,5.19e-09,10;UBERON:0001950,5.19e-09,10;UBERON:0004111,4.59e-08,122;UBERON:0004733,7.21e-08,6;UBERON:0004732,7.21e-08,6;UBERON:0002028,7.21e-08,6;UBERON:0007277,7.21e-08,6;UBERON:0002240,3.74e-07,6;UBERON:0005174,3.74e-07,6;UBERON:0001137,3.74e-07,6 | |||
|phase1_expression=0.640595388419176,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.765389611359628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.629484089877886,0.405507724878058,0.734187008646726,3.12956537739216,3.70642765846759,3.29529274101708,5.05517737593137,2.65974201088189,0,0,0,0,0.514518872071894,1.71920063963254,0.515672092277442,1.01158230429799,2.64495489636016,0,1.35537812827653,2.66788438833342,0,0,0,2.09720077362883,4.99483796918021,1.34796496001021,1.4850653216486,1.05162480675691,2.85650984403804,4.19650227808066,0.857435594504678,2.30029130443767,0,4.40463523997555,6.51205424234457,7.0659005297872,2.1101806036831,2.28719109006024,1.56274011167028,8.09630697104005,7.31591393041184,10.5430790965999,2.65165726926301,2.98980529678116,1.86399445825301,0.075726193333184,0.529000920747499,0,0,0,0,0,0,0.280888840263504,3.57903677413921,3.63700406444016,6.71345191569646,0.14084341977668,2.56652954828636,2.54805239706646,0,0,0,0,0.22836775943812,0,2.82040064223167,0.867426633830679,0.913396434936424,0.461230994512117,0.60289056221049,0.940709657085638,1.0053327306374,0,0.144599356919912,0,1.29413479957927,0.441683036920787,0,0,5.85561594023094,3.56059401582874,0.255457055208591,0,0,0.127070227073065,8.23848516726525,4.11750542536764,4.14659361972453,3.30266208365325,3.58001640262463,6.02585329222724,6.16516799657479,0.203678727700633,0.124406970610093,0,0.210441855886474,0.130120442962704,0,0.360124259610698,0.452114453507145,1.02054748726992,0.384341160854549,0.281105173679186,1.81092359517311,0,0.567318240503458,1.23165786914764,0.876782929710299,0.556094498451196,1.0447564995665,0.823128545631774,0,0,0,0,0.414251545071004,0.234526059981096,0,0.23674473558521,0.590292695242212,0.154267112887378,0,0.268273401399619,0,0.16455984991348,0,0.243206428637567,0.292399974850665,0.439100230582101,0.134206418760372,5.04695876553905,1.54356918568927,0,0,0,0.464473343720877,0.515469845288373,0.403367049246685,0,0.190225626112559,0,0,0.251335208800269,0.397912944082302,0.19496408711912,0,0.216138049874694,0.199141273254367,0.379335801906163,0.342745537829186,1.1270773567308,0.407302655690628,0.581857461502877,0.210407459670956,0.252946148497029,0,0,0,0,0,0.196558995113203,0.224862112384854,0.202860121388503,0.241177159752417,0,0,0,0,0,0,0,0,0,0,0,0,0.325929952884052,1.01847051465113,0.469380496577004,0.167506257441816,0.238043640886014,0,0,0,0,0,0.172684981865896,0,0,0,0,0.275936746304732,4.97706828962155,5.39173758324135,2.13115428989678,0,0,0,0.430846795465598,0.238968797952552,0,0,0.404810701674894,0.876767573733936,0.395287777946524,7.06906896127976,0.567760340833074,0.35613120733451,0.651547837414304,1.48473110675282,0,0,0.302323556964751,0,0.590603785761546,0.614870295887855,0.775284879504663,1.09060118843252,0.356497378384721,0,0,0,2.7235168460303,0.720244376125241,0.388076051348264,0.428674070063185,0.354680467284547,0.535106452806212,0,0,0,0,0,0.16488625294148,0.968786560175433,0.422190474497091,0.596861720015682,0.164140899745061,0,5.93360966433631,0,0.206386867963223,0,0.188368457004691,0,0,0.169978429993855,0,0,0,0.158167996790568,0.406638934253697,0.324016022465404,0.627264888043406,0.87345025498471,0.404593039154462,0.578574190077352,0.523511883968059,0.259229946583586,0,0,0,0.165458490457098,0.194451188344048,0.129159823477731,0.844780627453891,0.234714477291508,0.2604087696879,0.314578033277133,0.241584120826006,0,0,0,0.308132871494482,0.25984164595559,0,0,0.120195449519969,0,0,0,0,0,0,0,0,0.221985953374065,0.179427713218951,0,0.386379188064381,1.12609485270709,1.09890974560359,0.214368379079066,0,2.25900737046827,1.84130094602871,2.29158205375759,1.71853182343688,1.37016503954128,2.2661816921691,2.02506750069542,2.70192721934532,3.62513927187364,1.55328093525546,0.103787347584177,0,0.341467211508268,1.21553358534147,0,0.919217542250071,0.666740183404846,1.64828045791115,0.320919209591815,0.505394423527595,0.760437899670719,0.565879024158229,0.37456602987953,0.832326981263301,0.918967503289812,1.42888107384922,0.695305955669133,1.54327376370964,1.23625770240992,0.883193520806384,1.02860775715625,0.532427418478012,1.66905332963125,0.726732083161643,0.752875043322645,1.01537529470012,0.548783918618318,0.789209134313529,0.679020569229309,1.12228454331548,0.711810108745045,0.985044823755635,1.63692417267876,1.08455788830176,0.771626443924566,2.49810577937946,0.233931608445408,0.214871054048298,0.57386499620653,0.661774257358546,0.695603506861264 | |||
|short_description=p3@Ece2 | |||
}} |
Latest revision as of 18:01, 1 October 2015
Short description: | p3@Ece2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Ece2_5end |
Coexpression cluster: | MCL_coexpression_mm9:20 |
Association with transcript: | 0bp_to_ENSMUST00000003898_5end |
EntrezGene: | Ece2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.18e-15 | 23 |
neuroblast (sensu Vertebrata) | 1.18e-15 | 23 |
neural cell | 4.54e-13 | 43 |
ectodermal cell | 1.40e-12 | 44 |
neurectodermal cell | 1.40e-12 | 44 |
neuron | 4.74e-09 | 33 |
neuronal stem cell | 4.74e-09 | 33 |
neuroblast | 4.74e-09 | 33 |
electrically signaling cell | 4.74e-09 | 33 |
electrically responsive cell | 1.20e-07 | 39 |
electrically active cell | 1.20e-07 | 39 |
oligodendrocyte precursor cell | 5.00e-07 | 8 |
embryonic cell | 5.48e-07 | 70 |