FF:12164-128H4: Difference between revisions
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{{f5samples | {{f5samples | ||
|ancestors_in_anatomy_facet= | |DRA_sample_Accession=CAGE@SAMD00005483 | ||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003 | |accession_numbers=CAGE;DRX008777;DRR009649;DRZ001074;DRZ002459;DRZ012424;DRZ013809 | ||
|ancestors_in_anatomy_facet= | |||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003 | |||
|ancestors_in_disease_facet= | |ancestors_in_disease_facet= | ||
|ancestors_in_ff_facet=FF:0000102,FF:0000002,FF:0000101,FF:0000103,FF:0000001 | |||
|comment=Previously: MDSC (MC1-positiveGr1-positive) control, rep3 (0128 PBS). TODO: full classification | |comment=Previously: MDSC (MC1-positiveGr1-positive) control, rep3 (0128 PBS). TODO: full classification | ||
|created_by= | |created_by= | ||
|creation_date= | |creation_date= | ||
|data_phase=2 | |||
|datafreeze_phase=2 | |||
|def= | |def= | ||
|expression_enrichment_score=chr14:55330976..55330990,-!p1@Cebpe!2.40!248.10!Cebpe;;chr15:103085802..103085817,-!p4@Nfe2!2.14!170.41!Nfe2;;chr6:86619104..86619119,-!p1@Mxd1!2.11!974.42!Mxd1;;chr2:90936901..90936945,+!p1@Sfpi1!2.04!539.40!Sfpi1;;chr11:16908650..16908690,-!p1@Plek!2.03!605.92!Plek;;chr11:11586218..11586285,+!p1@Ikzf1!2.03!320.92!Ikzf1;;chr15:103085660..103085681,-!p1@Nfe2!2.03!155.36!Nfe2;;chr2:90936947..90936977,+!p2@Sfpi1!1.99!185.95!Sfpi1;;chr14:55330957..55330971,-!p2@Cebpe!1.89!77.20!Cebpe;;chr2:90922554..90922575,+!p4@Sfpi1!1.84!119.92!Sfpi1;;chr5:92391466..92391471,+!p2@Thap6!1.80!88.36!Thap6;;chr2:90936978..90937023,+!p3@Sfpi1!1.79!112.15!Sfpi1;;chr4:63064364..63064384,-!p1@Akna!1.75!156.82!Akna;;chr15:103085864..103085876,-!p5@Nfe2!1.72!51.95!Nfe2;;chr13:59923965..59924003,-!p2@Zcchc6!1.69!56.32!Zcchc6;;chr1:87546583..87546595,+!p1@Sp100!1.64!59.72!Sp100;;chr1:52065454..52065495,+!p1@Stat4!1.62!65.54!Stat4;;chr1:52065508..52065522,+!p2@Stat4!1.61!46.61!Stat4;;chr8:87225329..87225396,+!p1@Lyl1!1.52!117.49!Lyl1;;chr15:103085690..103085710,-!p3@Nfe2!1.50!33.50!Nfe2;;chr16:15887371..15887385,+!p1@Cebpd!1.47!926.35!Cebpd;;chr4:124805061..124805087,-!p1@Zc3h12a!1.47!85.94!Zc3h12a;;chr12:86814833..86814846,+!p1@Fos!1.45!604.95!Fos;;chr16:92826249..92826325,-!p1@Runx1!1.45!65.06!Runx1;;chr17:33766353..33766393,+!p2@Zfp414!1.44!71.37!Zfp414;;chr2:90936886..90936898,+!p5@Sfpi1!1.44!31.56!Sfpi1;;chr19:37509324..37509337,+!p1@Hhex!1.43!177.21!Hhex;;chr6:86619130..86619158,-!p2@Mxd1!1.42!351.51!Mxd1;;chr2:90922519..90922544,+!p6@Sfpi1!1.42!27.67!Sfpi1;;chr19:37511197..37511206,+!p3@Hhex!1.42!25.25!Hhex;;chr11:100683839..100683890,-!p2@Stat5b!1.40!54.86!Stat5b;;chr12:78063057..78063070,-!p3@Max!1.38!48.07!Max;;chr12:78063032..78063043,-!p4@Max!1.36!30.10!Max;;chr11:120491440..120491474,-!p3@Mafg!1.34!30.10!Mafg;;chr9:32348943..32349001,-!p1@Fli1!1.33!162.16!Fli1;;chr14:55331234..55331245,-!p4@Cebpe!1.32!19.91!Cebpe;;chr4:63064395..63064410,-!p2@Akna!1.31!33.01!Akna;;chr12:78063146..78063159,-!p2@Max!1.30!48.55!Max;;chr2:90936867..90936874,+!p7@Sfpi1!1.29!18.45!Sfpi1;;chr19:5447692..5447711,+!p2@Fosl1!1.29!18.45!Fosl1;;chr2:173044380..173044432,-!p1@Zbp1!1.28!42.72!Zbp1;;chr2:120996813..120996829,-!p2@Zscan29!1.27!29.13!Zscan29;;chr14:55331167..55331204,-!p3@Cebpe!1.27!17.48!Cebpe;;chr11:120491830..120491851,-!p10@Mafg!1.26!16.99!Mafg;;chr8:87502608..87502623,-!p1@Junb!1.22!248.10!Junb;;chr5:32438831..32438878,+!p1@Fosl2!1.22!156.82!Fosl2;;chr7:87170879..87170914,+!p2@Zfp710!1.22!35.93!Zfp710;;chr1:87497610..87497645,+!p1@Gm2427,p1@Sp140!1.19!14.57!Sp140;;chr7:148452314..148452329,-!p1@Irf7!1.18!97.10!Irf7;;chr7:31206743..31206761,+!p1@Nfkbid!1.18!19.42!Nfkbid;;chr1:186556410..186556424,-!p1@Hlx!1.16!42.24!Hlx;;chr10:80870405..80870428,-!p4@Nfic!1.16!35.93!Nfic;;chr5:32438894..32438908,+!p2@Fosl2!1.16!28.65!Fosl2;;chr11:100800641..100800669,-!p3@Stat3!1.14!22.33!Stat3;;chr14:98568532..98568561,-!p4@Dach1!1.14!19.42!Dach1;;chr7:31208285..31208312,+!p3@Nfkbid!1.14!14.08!Nfkbid;;chr13:5860872..5860883,+!p3@Klf6!1.12!24.28!Klf6;;chr16:55822241..55822258,-!p1@Nfkbiz!1.09!351.51!Nfkbiz;;chr15:25914114..25914128,+!p2@Zfp622!1.09!46.12!Zfp622;;chr16:23988711..23988727,-!p1@Bcl6!1.06!123.32!Bcl6;;chr12:86940338..86940357,+!p1@Jdp2!1.06!105.36!Jdp2;;chr8:125778192..125778217,+!p2@Zfp276!1.06!29.62!Zfp276;;chr10:79389784..79389833,+!p1@Arid3a!1.05!54.86!Arid3a;;chr5:140267510..140267555,+!p2@Mafk!1.05!24.28!Mafk;;chr1:92949999..92950097,+!p1@Lrrfip1!1.04!263.63!Lrrfip1;;chr16:95680889..95680991,-!p1@Erg!1.04!82.54!Erg;;chrX:137077716..137077734,-!p1@Tsc22d3!1.04!71.86!Tsc22d3;;chr14:32978970..32978984,+!p2@Gm6768,p2@Ncoa4!1.03!15.54!Ncoa4;;chr15:103085821..103085828,-!p6@Nfe2!1.03!9.71!Nfe2;;chr1:52176315..52176343,+!p1@Stat1!1.02!139.34!Stat1;;chr11:98822081..98822092,+!p14@Rara!1.01!9.22!Rara;;chr5:108155037..108155060,-!p2@Gfi1!1.01!9.22!Gfi1;;chr15:103083245..103083260,-!p7@Nfe2!1.01!9.22!Nfe2;;chr11:11585678..11585745,+!p5@Ikzf1!1.00!13.11!Ikzf1;;chr19:53384910..53384937,+!p3@Mxi1!0.97!24.28!Mxi1;;chr3:89191054..89191070,-!p5@Zbtb7b!0.97!8.25!Zbtb7b;;chr13:5860776..5860796,+!p1@Klf6!0.96!203.91!Klf6;;chr16:3872286..3872315,-!p3@Zfp597!0.96!16.02!Zfp597;;chr11:23670953..23671028,-!p1@Rel!0.95!46.61!Rel;;chr5:138187195..138187255,+!p1@Tsc22d4!0.94!341.31!Tsc22d4;;chr1:52065530..52065548,+!p3@Stat4!0.94!7.77!Stat4;;chr12:87027598..87027652,+!p1@Batf!0.93!17.96!Batf;;chr12:113916993..113917009,+!p2@Zbtb42!0.93!13.11!Zbtb42;;chr6:99385340..99385362,-!p11@Foxp1!0.92!7.28!Foxp1;;chr19:53384985..53385042,+!p1@Mxi1!0.91!227.70!Mxi1;;chr10:127080031..127080090,+!p1@Stat6!0.90!156.82!Stat6;;chr2:72817045..72817123,-!p1@Sp3!0.89!230.13!Sp3;;chr1:36364590..36364608,+!p1@Arid5a!0.89!72.34!Arid5a;;chr16:8672238..8672254,-!p2@Carhsp1,p2@Gm9791!0.89!9.71!Carhsp1;;chr15:103083199..103083215,-!p8@Nfe2!0.89!6.80!Nfe2;;chr15:103085858..103085863,-!p11@Nfe2!0.89!6.80!Nfe2;;chr2:173044357..173044377,-!p2@Zbp1!0.88!9.71!Zbp1;;c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| |expression_enrichment_score=chr14:55330976..55330990,-!p1@Cebpe!2.40!248.10!Cebpe;;chr15:103085802..103085817,-!p4@Nfe2!2.14!170.41!Nfe2;;chr6:86619104..86619119,-!p1@Mxd1!2.11!974.42!Mxd1;;chr2:90936901..90936945,+!p1@Sfpi1!2.04!539.40!Sfpi1;;chr11:16908650..16908690,-!p1@Plek!2.03!605.92!Plek;;chr11:11586218..11586285,+!p1@Ikzf1!2.03!320.92!Ikzf1;;chr15:103085660..103085681,-!p1@Nfe2!2.03!155.36!Nfe2;;chr2:90936947..90936977,+!p2@Sfpi1!1.99!185.95!Sfpi1;;chr14:55330957..55330971,-!p2@Cebpe!1.89!77.20!Cebpe;;chr2:90922554..90922575,+!p4@Sfpi1!1.84!119.92!Sfpi1;;chr5:92391466..92391471,+!p2@Thap6!1.80!88.36!Thap6;;chr2:90936978..90937023,+!p3@Sfpi1!1.79!112.15!Sfpi1;;chr4:63064364..63064384,-!p1@Akna!1.75!156.82!Akna;;chr15:103085864..103085876,-!p5@Nfe2!1.72!51.95!Nfe2;;chr13:59923965..59924003,-!p2@Zcchc6!1.69!56.32!Zcchc6;;chr1:87546583..87546595,+!p1@Sp100!1.64!59.72!Sp100;;chr1:52065454..52065495,+!p1@Stat4!1.62!65.54!Stat4;;chr1:52065508..52065522,+!p2@Stat4!1.61!46.61!Stat4;;chr8:87225329..87225396,+!p1@Lyl1!1.52!117.49!Lyl1;;chr15:103085690..103085710,-!p3@Nfe2!1.50!33.50!Nfe2;;chr16:15887371..15887385,+!p1@Cebpd!1.47!926.35!Cebpd;;chr4:124805061..124805087,-!p1@Zc3h12a!1.47!85.94!Zc3h12a;;chr12:86814833..86814846,+!p1@Fos!1.45!604.95!Fos;;chr16:92826249..92826325,-!p1@Runx1!1.45!65.06!Runx1;;chr17:33766353..33766393,+!p2@Zfp414!1.44!71.37!Zfp414;;chr2:90936886..90936898,+!p5@Sfpi1!1.44!31.56!Sfpi1;;chr19:37509324..37509337,+!p1@Hhex!1.43!177.21!Hhex;;chr6:86619130..86619158,-!p2@Mxd1!1.42!351.51!Mxd1;;chr2:90922519..90922544,+!p6@Sfpi1!1.42!27.67!Sfpi1;;chr19:37511197..37511206,+!p3@Hhex!1.42!25.25!Hhex;;chr11:100683839..100683890,-!p2@Stat5b!1.40!54.86!Stat5b;;chr12:78063057..78063070,-!p3@Max!1.38!48.07!Max;;chr12:78063032..78063043,-!p4@Max!1.36!30.10!Max;;chr11:120491440..120491474,-!p3@Mafg!1.34!30.10!Mafg;;chr9:32348943..32349001,-!p1@Fli1!1.33!162.16!Fli1;;chr14:55331234..55331245,-!p4@Cebpe!1.32!19.91!Cebpe;;chr4:63064395..63064410,-!p2@Akna!1.31!33.01!Akna;;chr12:78063146..78063159,-!p2@Max!1.30!48.55!Max;;chr2:90936867..90936874,+!p7@Sfpi1!1.29!18.45!Sfpi1;;chr19:5447692..5447711,+!p2@Fosl1!1.29!18.45!Fosl1;;chr2:173044380..173044432,-!p1@Zbp1!1.28!42.72!Zbp1;;chr2:120996813..120996829,-!p2@Zscan29!1.27!29.13!Zscan29;;chr14:55331167..55331204,-!p3@Cebpe!1.27!17.48!Cebpe;;chr11:120491830..120491851,-!p10@Mafg!1.26!16.99!Mafg;;chr8:87502608..87502623,-!p1@Junb!1.22!248.10!Junb;;chr5:32438831..32438878,+!p1@Fosl2!1.22!156.82!Fosl2;;chr7:87170879..87170914,+!p2@Zfp710!1.22!35.93!Zfp710;;chr1:87497610..87497645,+!p1@Gm2427,p1@Sp140!1.19!14.57!Sp140;;chr7:148452314..148452329,-!p1@Irf7!1.18!97.10!Irf7;;chr7:31206743..31206761,+!p1@Nfkbid!1.18!19.42!Nfkbid;;chr1:186556410..186556424,-!p1@Hlx!1.16!42.24!Hlx;;chr10:80870405..80870428,-!p4@Nfic!1.16!35.93!Nfic;;chr5:32438894..32438908,+!p2@Fosl2!1.16!28.65!Fosl2;;chr11:100800641..100800669,-!p3@Stat3!1.14!22.33!Stat3;;chr14:98568532..98568561,-!p4@Dach1!1.14!19.42!Dach1;;chr7:31208285..31208312,+!p3@Nfkbid!1.14!14.08!Nfkbid;;chr13:5860872..5860883,+!p3@Klf6!1.12!24.28!Klf6;;chr16:55822241..55822258,-!p1@Nfkbiz!1.09!351.51!Nfkbiz;;chr15:25914114..25914128,+!p2@Zfp622!1.09!46.12!Zfp622;;chr16:23988711..23988727,-!p1@Bcl6!1.06!123.32!Bcl6;;chr12:86940338..86940357,+!p1@Jdp2!1.06!105.36!Jdp2;;chr8:125778192..125778217,+!p2@Zfp276!1.06!29.62!Zfp276;;chr10:79389784..79389833,+!p1@Arid3a!1.05!54.86!Arid3a;;chr5:140267510..140267555,+!p2@Mafk!1.05!24.28!Mafk;;chr1:92949999..92950097,+!p1@Lrrfip1!1.04!263.63!Lrrfip1;;chr16:95680889..95680991,-!p1@Erg!1.04!82.54!Erg;;chrX:137077716..137077734,-!p1@Tsc22d3!1.04!71.86!Tsc22d3;;chr14:32978970..32978984,+!p2@Gm6768,p2@Ncoa4!1.03!15.54!Ncoa4;;chr15:103085821..103085828,-!p6@Nfe2!1.03!9.71!Nfe2;;chr1:52176315..52176343,+!p1@Stat1!1.02!139.34!Stat1;;chr11:98822081..98822092,+!p14@Rara!1.01!9.22!Rara;;chr5:108155037..108155060,-!p2@Gfi1!1.01!9.22!Gfi1;;chr15:103083245..103083260,-!p7@Nfe2!1.01!9.22!Nfe2;;chr11:11585678..11585745,+!p5@Ikzf1!1.00!13.11!Ikzf1;;chr19:53384910..53384937,+!p3@Mxi1!0.97!24.28!Mxi1;;chr3:89191054..89191070,-!p5@Zbtb7b!0.97!8.25!Zbtb7b;;chr13:5860776..5860796,+!p1@Klf6!0.96!203.91!Klf6;;chr16:3872286..3872315,-!p3@Zfp597!0.96!16.02!Zfp597;;chr11:23670953..23671028,-!p1@Rel!0.95!46.61!Rel;;chr5:138187195..138187255,+!p1@Tsc22d4!0.94!341.31!Tsc22d4;;chr1:52065530..52065548,+!p3@Stat4!0.94!7.77!Stat4;;chr12:87027598..87027652,+!p1@Batf!0.93!17.96!Batf;;chr12:113916993..113917009,+!p2@Zbtb42!0.93!13.11!Zbtb42;;chr6:99385340..99385362,-!p11@Foxp1!0.92!7.28!Foxp1;;chr19:53384985..53385042,+!p1@Mxi1!0.91!227.70!Mxi1;;chr10:127080031..127080090,+!p1@Stat6!0.90!156.82!Stat6;;chr2:72817045..72817123,-!p1@Sp3!0.89!230.13!Sp3;;chr1:36364590..36364608,+!p1@Arid5a!0.89!72.34!Arid5a;;chr16:8672238..8672254,-!p2@Carhsp1,p2@Gm9791!0.89!9.71!Carhsp1;;chr15:103083199..103083215,-!p8@Nfe2!0.89!6.80!Nfe2;;chr15:103085858..103085863,-!p11@Nfe2!0.89!6.80!Nfe2;;chr2:173044357..173044377,-!p2@Zbp1!0.88!9.71!Zbp1;;chr11:100800621..100800633,-!p5@Stat3!0.88!7.77!Stat3;;chr11:53583544..53583559,+!p1@Irf1!0.87!114.58!Irf1;;chr8:74842952..74842970,+!p1@Klf2!0.86!445.70!Klf2;;chr11:98821937..98821987,+!p4@Rara!0.85!14.08!Rara;;chr3:135354349..135354371,-!p6@Nfkb1!0.85!13.11!Nfkb1;;chr9:57684520..57684612,-!p1@Arid3b!0.84!56.32!Arid3b;;chrX:45807329..45807370,-!p1@Elf4!0.84!44.67!Elf4;;chr14:79915425..79915501,+!p1@Elf1!0.83!55.35!Elf1;;chr14:56223010..56223067,+!p1@Irf9!0.83!48.07!Irf9;;chr4:135728581..135728668,+!p1@E2f2!0.83!29.13!E2f2;;chr17:88840054..88840081,+!p2@Foxn2!0.82!50.98!Foxn2;;chr2:169956656..169956684,-!p1@Zfp217!0.82!40.30!Zfp217;;chr8:72663098..72663160,-!p2@LOC100048268,p2@Rfxank!0.81!29.13!Rfxank;;chr5:145962698..145962742,-!p1@Zkscan14!0.80!26.70!Zkscan14;;chr18:83080255..83080277,+!p4@Zfp516!0.80!14.08!Zfp516;;chr19:26681226..26681299,+!p7@Smarca2!0.80!13.11!Smarca2;;chr5:22940353..22940372,+!p3@Mll5!0.80!10.68!Mll5;;chr11:98822047..98822072,+!p9@Rara!0.80!5.34!Rara;;chr10:82226833..82226864,-!p3@Nfyb!0.79!28.65!Nfyb;;chr16:3872255..3872283,-!p4@Zfp597!0.79!7.77!Zfp597;;chr11:100800671..100800770,-!p1@Stat3!0.78!176.73!Stat3;;chr14:99697871..99697934,+!p1@Klf5!0.78!107.78!Klf5;;chr10:79390075..79390115,+!p2@Arid3a!0.78!18.45!Arid3a;;chr2:126501847..126501876,-!p5@Gabpb1!0.78!5.83!Gabpb1;;chr18:80904854..80904919,-!p2@Nfatc1!0.77!64.09!Nfatc1;;chr1:87497247..87497279,+!p2@Gm2427,p2@Sp140!0.77!4.86!Sp140;;chr14:98568502..98568516,-!p7@Dach1!0.77!4.86!Dach1;;chr18:70727922..70728052,+!p1@Mbd2!0.76!189.35!Mbd2;;chr18:35020615..35020641,+!p2@Egr1!0.76!5.83!Egr1;;chr7:49761065..49761106,-!p1@ENSMUST00000174407,p1@uc009gmb.1!0.75!27.67!Zfp141;;chr2:72818978..72818997,-!p4@Sp3!0.75!22.33!Sp3;;chr13:67461490..67461531,-!p1@Zfp595,p1@Zfp953!0.74!20.39!Zfp953;;chrX:7339829..7339855,+!p3@Tfe3!0.74!13.11!Tfe3;;chr17:51971932..51971958,-!p2@Satb1!0.74!6.31!Satb1;;chr1:74634786..74634804,-!p5@Zfp142!0.74!6.31!Zfp142;;chr11:106134241..106134320,-!p2@Smarcd2!0.73!55.35!Smarcd2;;chr5:31262571..31262582,-!p4@Preb!0.73!5.34!Preb;;chr1:87495371..87495397,-!p1@Sp110!0.73!4.37!Sp110;;chr11:98822093..98822104,+!p16@Rara!0.73!4.37!Rara;;chr16:92826232..92826245,-!p4@Runx1!0.73!4.37!Runx1;;chr13:59924433..59924504,-!p1@Zcchc6!0.72!106.81!Zcchc6;;chr3:135354289..135354334,-!p3@Nfkb1!0.72!23.79!Nfkb1;;chr10:41995430..41995458,-!p3@Foxo3!0.72!12.14!Foxo3;;chr17:47873985..47874056,+!p1@Tfeb!0.71!38.36!Tfeb;;chr17:88840082..88840127,+!p1@Foxn2!0.71!32.53!Foxn2;;chr11:98821858..98821907,+!p6@Rara!0.71!7.28!Rara;;chr2:75542527..75542590,-!p1@Nfe2l2!0.70!409.77!Nfe2l2;;chr6:92042363..92042413,+!p3@Nr2c2!0.70!10.68!Nr2c2;;chr16:55966492..55966517,+!p2@Rpl24,p2@Zbtb11!0.70!5.34!Zbtb11;;chr9:32503590..32503680,+!p1@Ets1!0.69!163.13!Ets1;;chr18:39650303..39650371,-!p1@Nr3c1!0.69!50.98!Nr3c1;;chr8:72520162..72520197,-!p4@Gatad2a!0.69!22.82!Gatad2a;;chr3:89197216..89197258,-!p3@Zbtb7b!0.69!8.74!Zbtb7b;;chr17:51972017..51972022,-!p17@Satb1!0.69!3.88!Satb1;;chr9:111020574..111020687,+!p1@Lrrfip2!0.68!192.75!Lrrfip2;;chr2:167514456..167514473,+!p1@Cebpb!0.68!191.78!Cebpb;;chr8:125778131..125778178,+!p1@Zfp276!0.68!19.91!Zfp276;;chr17:45692642..45692663,+!p1@Nfkbie!0.68!13.59!Nfkbie;;chr2:120996843..120996894,-!p1@Zscan29!0.67!26.22!Zscan29;;chr8:72520139..72520157,-!p6@Gatad2a!0.67!16.51!Gatad2a;;chr18:83080278..83080293,+!p5@Zfp516!0.67!9.22!Zfp516;;chr5:38611621..38611635,-!p2@Zbtb49!0.67!5.83!Zbtb49;;chr13:53076396..53076452,-!p1@Nfil3!0.66!75.25!Nfil3;;chrX:137077653..137077669,-!p3@Tsc22d3!0.66!18.45!Tsc22d3;;chr8:47825107..47825145,+!p1@Irf2!0.65!164.59!Irf2;;chr2:72817659..72817725,-!p5@Sp3!0.65!16.51!Sp3;;chrX:45807489..45807502,-!p2@Elf4!0.65!12.14!Elf4;;chr13:37870307..37870337,+!p5@Rreb1!0.65!8.74!Rreb1;;chr17:45692676..45692695,+!p2@Nfkbie!0.65!7.77!Nfkbie;;chr10:127080091..127080100,+!p4@Stat6!0.65!5.34!Stat6;;chr12:56593574..56593592,-!p1@Nfkbia!0.64!206.83!Nfkbia;;chr1:170362273..170362317,-!p1@Pbx1!0.64!114.09!Pbx1;;chr12:72116953..72117050,+!p1@Arid4a!0.64!48.07!Arid4a;;chr3:94819338..94819384,-!p1@Zfp687!0.64!36.90!Zfp687;;chr14:98568971..98569025,-!p1@Dach1!0.64!30.10!Dach1;;chr11:98821749..98821799,+!p2@Rara!0.64!24.76!Rara;;chr18:83080305..83080335,+!p2@Zfp516!0.64!12.14!Zfp516;;chr13:53076382..53076393,-!p2@Nfil3!0.64!5.83!Nfil3;;chr4:134708909..134708939,+!p3@Runx3!0.64!3.40!Runx3;;chr2:126501799..126501832,-!p4@Gabpb1!0.64!3.40!Gabpb1;;chr11:90249521..90249551,-!p3@Hlf!0.64!3.40!Hlf;;chr8:108582687..108582734,+!p4@Nfatc3!0.64!3.40!Nfatc3;;chr11:100948597..100948637,+!p1@Mlx!0.63!92.73!Mlx;;chr5:104183173..104183207,+!p1@Aff1!0.63!50.49!Aff1;;chr1:74634691..74634719,-!p2@Zfp142!0.63!9.22!Zfp142;;chr6:120314411..120314466,+!p2@Kdm5a!0.62!27.19!Kdm5a;;chr5:140267476..140267493,+!p1@Mafk!0.62!20.88!Mafk;;chr5:104121391..104121450,+!p3@Aff1!0.62!19.42!Aff1;;chrX:66613481..66613562,+!p1@Aff2!0.62!16.02!Aff2;;chr4:124805092..124805135,-!p2@Zc3h12a!0.62!15.54!Zc3h12a;;chr17:45570455..45570479,-!p2@Cdc5l!0.62!13.59!Cdc5l;;chr3:8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| ||
Line 37: | Line 42: | ||
|id=FF:12164-128H4 | |id=FF:12164-128H4 | ||
|is_a=EFO:0002091;;FF:0000002;;FF:0000103 | |is_a=EFO:0002091;;FF:0000002;;FF:0000103 | ||
|is_obsolete= | |||
|library_id=CNhs12543 | |||
|library_id_phase_based=2:CNhs12543 | |||
|microRNAs= | |||
|microRNAs_nn= | |||
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/mouse#cage;sample;12164 | |||
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/mouse#cage;sample;12164 | |||
|mm10bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/mm10_v2/basic/mouse.primary_cell.LQhCAGE/MC1%252bGr1%252b%2520myeloid-derived%2520suppressor%2520cells%2520control%252c%2520donor3%2520%25280128%2520PBS%2529.CNhs12543.12164-128H4.mm10.nobarcode.bam | |||
|mm10ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/mm10_v2/basic/mouse.primary_cell.LQhCAGE/MC1%252bGr1%252b%2520myeloid-derived%2520suppressor%2520cells%2520control%252c%2520donor3%2520%25280128%2520PBS%2529.CNhs12543.12164-128H4.mm10.nobarcode.ctss.bed.gz | |||
|mm9bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/mouse.primary_cell.LQhCAGE/MC1%252bGr1%252b%2520myeloid-derived%2520suppressor%2520cells%2520control%252c%2520donor3%2520%25280128%2520PBS%2529.CNhs12543.12164-128H4.mm9.nobarcode.bam | |||
|mm9ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/mouse.primary_cell.LQhCAGE/MC1%252bGr1%252b%2520myeloid-derived%2520suppressor%2520cells%2520control%252c%2520donor3%2520%25280128%2520PBS%2529.CNhs12543.12164-128H4.mm9.ctss.bed.gz | |||
|mm9fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/mouse.primary_cell.LQhCAGE/MC1%252bGr1%252b%2520myeloid-derived%2520suppressor%2520cells%2520control%252c%2520donor3%2520%25280128%2520PBS%2529.CNhs12543.12164-128H4.mm9.nobarcode.rdna.fa.gz | |||
|name=MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS) | |name=MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS) | ||
|namespace=FANTOM5 | |namespace=FANTOM5 | ||
Line 42: | Line 59: | ||
|profile_cagescan=,,, | |profile_cagescan=,,, | ||
|profile_hcage=CNhs12543,LSID920,release012,COMPLETED | |profile_hcage=CNhs12543,LSID920,release012,COMPLETED | ||
|profile_rnaseq= | |profile_rnaseq= | ||
|profile_srnaseq=,,, | |profile_srnaseq=,,, | ||
|repeat_enrich_byfamily=-0.11779559634038,0,0,0,0,0,-0.170711249904632,0,0,0,0,-0.0843392403965415,0,0,0,0,0.085937841448715,0,-0.191893350882575,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.263731605649171,0,0,0,0,0,-0.123384884047111,-0.091558018055706,0.252618433053174,-0.984211366477826,-0.269868638010351,0,0,0,0,0,0,0,0,0,0,0,0,-0.0660055475634404,0,0,0,0.891935607468737,0,0,0,0.0851964154787637,0.468648781556237,0,-0.0550968273597496,0.0796716021583746,-0.158091042771083,-0.140687683267293,0,0,-0.173386686363151,0,0,0,-0.0870162963722783,0.259663817767695,-0.59591488074057,-0.0788315948399074,0,0,0,0,0,0,-0.114910867366072,-0.287218803317908,-0.183865160782684,0,0,0,0,0 | |||
|rna_box=128 | |rna_box=128 | ||
|rna_catalog_number= | |rna_catalog_number= | ||
Line 57: | Line 75: | ||
|rna_weight_ug=0.711 | |rna_weight_ug=0.711 | ||
|sample_age= | |sample_age= | ||
|sample_category=primary cells | |||
|sample_cell_catalog= | |sample_cell_catalog= | ||
|sample_cell_line= | |sample_cell_line= | ||
Line 76: | Line 95: | ||
|sample_tissue=bone marrow | |sample_tissue=bone marrow | ||
|top_motifs=SPI1:4.18792226764;CEBPA,B_DDIT3:3.80737645001;SPIB:3.38222499846;HLF:3.15280538262;ETS1,2:3.09553022785;PAX2:3.07058081988;ELF1,2,4:2.87144494775;RUNX1..3:2.5067303263;SREBF1,2:2.45509307426;NFE2:2.33816579577;IRF7:2.15054308797;ELK1,4_GABP{A,B1}:1.89338050981;ATF5_CREB3:1.76642484966;FOXO1,3,4:1.6912979805;ATF4:1.68527175598;NKX2-2,8:1.63017691708;PPARG:1.55467170587;NANOG{mouse}:1.38477784554;ZNF148:1.38372950196;CREB1:1.35009810567;NR3C1:1.33809604423;FOXP3:1.32525244398;MYB:1.29095568294;HOX{A5,B5}:1.25575085505;BACH2:1.23067095735;NFE2L2:1.21078046964;IRF1,2:1.15388286119;STAT5{A,B}:0.996870391531;NFKB1_REL_RELA:0.943964930034;TLX2:0.870798055427;NFIX:0.810124136684;DMAP1_NCOR{1,2}_SMARC:0.682918846503;RXRA_VDR{dimer}:0.658339522772;ALX1:0.634773445921;PAX1,9:0.602205152275;AIRE:0.55223133587;POU2F1..3:0.54493873125;FOX{D1,D2}:0.533129956674;POU5F1:0.491322296962;ALX4:0.399710445345;EBF1:0.389073083776;TAL1_TCF{3,4,12}:0.378825778439;STAT2,4,6:0.312876835807;NR6A1:0.29585170834;FOX{I1,J2}:0.279097110252;FOS_FOS{B,L1}_JUN{B,D}:0.253002152624;ARID5B:0.250966150045;NFIL3:0.214568604304;E2F1..5:0.198562839512;GLI1..3:0.163808958552;EN1,2:0.154040957046;SPZ1:0.135495209538;TGIF1:0.125669691291;NFY{A,B,C}:0.114336244128;ZBTB16:0.0529152266808;SRF:0.0215609751197;NFATC1..3:-0.0496460410364;FOX{F1,F2,J1}:-0.0744206285836;RFX2..5_RFXANK_RFXAP:-0.0883234206331;PRDM1:-0.105051094307;LHX3,4:-0.116383434428;HBP1_HMGB_SSRP1_UBTF:-0.165502343088;MAFB:-0.212136294078;NR5A1,2:-0.229058296116;BPTF:-0.232576441353;GATA6:-0.233541868916;HOX{A4,D4}:-0.297557872581;JUN:-0.327613629736;EP300:-0.344484530517;NFE2L1:-0.353232317957;LMO2:-0.35434308948;FOSL2:-0.355654109138;FOXM1:-0.362086827768;YY1:-0.444290459679;FOXQ1:-0.507267881081;SOX2:-0.512540927452;FOXN1:-0.528597974318;MEF2{A,B,C,D}:-0.556089723527;PAX4:-0.557148068462;OCT4_SOX2{dimer}:-0.580762836274;NKX6-1,2:-0.595368995799;TEF:-0.597550595404;FOXL1:-0.606208221461;IKZF2:-0.614492028612;GFI1:-0.634079183785;HNF4A_NR2F1,2:-0.634616579427;MYOD1:-0.660270977294;POU6F1:-0.667481742077;PITX1..3:-0.718219697772;ZNF423:-0.724385924435;SOX17:-0.736561628319;TFDP1:-0.738798194532;PRRX1,2:-0.748935776195;POU1F1:-0.757692545279;RFX1:-0.765352977043;FOXP1:-0.774283013992;ZEB1:-0.799142046963;AR:-0.824146541914;NKX2-1,4:-0.841653137932;HNF1A:-0.847122958176;POU3F1..4:-0.847363999179;ESRRA:-0.851736669314;RORA:-0.867011288693;NKX3-1:-0.869972987221;MYFfamily:-0.883056903391;NKX2-3_NKX2-5:-0.887398777421;NR1H4:-0.892113920308;TFAP4:-0.900159918867;IKZF1:-0.917128399388;TBX4,5:-0.932906667491;PAX5:-0.939173342257;TFCP2:-0.94904753957;ATF2:-0.95285781636;TBP:-0.963139126742;PBX1:-0.98812334032;SP1:-1.01279374524;FOXA2:-1.02256010302;ZNF384:-1.06704760943;HES1:-1.07791961696;MZF1:-1.08785424785;VSX1,2:-1.09143069227;EVI1:-1.11377116489;NRF1:-1.12673047929;ATF6:-1.13453279083;CUX2:-1.1406186047;ZBTB6:-1.14141219977;SNAI1..3:-1.16067892377;T:-1.17324260602;ZFP161:-1.18714938037;REST:-1.18737764177;NANOG:-1.19745461527;SMAD1..7,9:-1.21650062972;PAX8:-1.22539467212;MTF1:-1.24420793121;CDC5L:-1.27817887278;ZNF143:-1.34830840469;FOXD3:-1.36157032042;EGR1..3:-1.36789844525;XCPE1{core}:-1.36992011758;ZIC1..3:-1.37392069117;ONECUT1,2:-1.3814919186;GATA4:-1.38759034516;TP53:-1.38905292824;SOX{8,9,10}:-1.4077350489;GFI1B:-1.41940669164;NHLH1,2:-1.43160455433;MTE{core}:-1.44004776717;CRX:-1.46032353187;MED-1{core}:-1.4688423431;BREu{core}:-1.50648340489;LEF1_TCF7_TCF7L1,2:-1.50967230126;ADNP_IRX_SIX_ZHX:-1.51029685695;CDX1,2,4:-1.51705872601;HSF1,2:-1.53705367446;TFAP2B:-1.55726507881;SOX5:-1.57276332658;HIF1A:-1.57905035686;ZNF238:-1.63595863268;HOXA9_MEIS1:-1.65686196207;GTF2I:-1.65814364154;RXR{A,B,G}:-1.65864381136;RREB1:-1.68258162739;PAX6:-1.68886910232;PATZ1:-1.76704613538;STAT1,3:-1.77134230795;HMGA1,2:-1.7719788236;MAZ:-1.78469117007;MYBL2:-1.80552344285;UFEwm:-1.81869651898;RBPJ:-1.81893993488;ESR1:-1.8578847206;AHR_ARNT_ARNT2:-1.8647351869;DBP:-1.87445836556;HAND1,2:-1.90281215744;TFAP2{A,C}:-1.9337691816;GTF2A1,2:-1.98753211468;PDX1:-2.00132594219;TLX1..3_NFIC{dimer}:-2.02776602508;NKX3-2:-2.08322790547;KLF4:-2.11329506456;TEAD1:-2.14647684581;GZF1:-2.30213476041;bHLH_family:-2.3784310811;HMX1:-2.49538876683;HIC1:-2.53624581581;TOPORS:-2.54597498301;RXR{A,B,G}_{NR1H2,PPAR}dimers:-2.76325679485;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-2.92790343152;GCM1,2:-3.25348348357 | |top_motifs=SPI1:4.18792226764;CEBPA,B_DDIT3:3.80737645001;SPIB:3.38222499846;HLF:3.15280538262;ETS1,2:3.09553022785;PAX2:3.07058081988;ELF1,2,4:2.87144494775;RUNX1..3:2.5067303263;SREBF1,2:2.45509307426;NFE2:2.33816579577;IRF7:2.15054308797;ELK1,4_GABP{A,B1}:1.89338050981;ATF5_CREB3:1.76642484966;FOXO1,3,4:1.6912979805;ATF4:1.68527175598;NKX2-2,8:1.63017691708;PPARG:1.55467170587;NANOG{mouse}:1.38477784554;ZNF148:1.38372950196;CREB1:1.35009810567;NR3C1:1.33809604423;FOXP3:1.32525244398;MYB:1.29095568294;HOX{A5,B5}:1.25575085505;BACH2:1.23067095735;NFE2L2:1.21078046964;IRF1,2:1.15388286119;STAT5{A,B}:0.996870391531;NFKB1_REL_RELA:0.943964930034;TLX2:0.870798055427;NFIX:0.810124136684;DMAP1_NCOR{1,2}_SMARC:0.682918846503;RXRA_VDR{dimer}:0.658339522772;ALX1:0.634773445921;PAX1,9:0.602205152275;AIRE:0.55223133587;POU2F1..3:0.54493873125;FOX{D1,D2}:0.533129956674;POU5F1:0.491322296962;ALX4:0.399710445345;EBF1:0.389073083776;TAL1_TCF{3,4,12}:0.378825778439;STAT2,4,6:0.312876835807;NR6A1:0.29585170834;FOX{I1,J2}:0.279097110252;FOS_FOS{B,L1}_JUN{B,D}:0.253002152624;ARID5B:0.250966150045;NFIL3:0.214568604304;E2F1..5:0.198562839512;GLI1..3:0.163808958552;EN1,2:0.154040957046;SPZ1:0.135495209538;TGIF1:0.125669691291;NFY{A,B,C}:0.114336244128;ZBTB16:0.0529152266808;SRF:0.0215609751197;NFATC1..3:-0.0496460410364;FOX{F1,F2,J1}:-0.0744206285836;RFX2..5_RFXANK_RFXAP:-0.0883234206331;PRDM1:-0.105051094307;LHX3,4:-0.116383434428;HBP1_HMGB_SSRP1_UBTF:-0.165502343088;MAFB:-0.212136294078;NR5A1,2:-0.229058296116;BPTF:-0.232576441353;GATA6:-0.233541868916;HOX{A4,D4}:-0.297557872581;JUN:-0.327613629736;EP300:-0.344484530517;NFE2L1:-0.353232317957;LMO2:-0.35434308948;FOSL2:-0.355654109138;FOXM1:-0.362086827768;YY1:-0.444290459679;FOXQ1:-0.507267881081;SOX2:-0.512540927452;FOXN1:-0.528597974318;MEF2{A,B,C,D}:-0.556089723527;PAX4:-0.557148068462;OCT4_SOX2{dimer}:-0.580762836274;NKX6-1,2:-0.595368995799;TEF:-0.597550595404;FOXL1:-0.606208221461;IKZF2:-0.614492028612;GFI1:-0.634079183785;HNF4A_NR2F1,2:-0.634616579427;MYOD1:-0.660270977294;POU6F1:-0.667481742077;PITX1..3:-0.718219697772;ZNF423:-0.724385924435;SOX17:-0.736561628319;TFDP1:-0.738798194532;PRRX1,2:-0.748935776195;POU1F1:-0.757692545279;RFX1:-0.765352977043;FOXP1:-0.774283013992;ZEB1:-0.799142046963;AR:-0.824146541914;NKX2-1,4:-0.841653137932;HNF1A:-0.847122958176;POU3F1..4:-0.847363999179;ESRRA:-0.851736669314;RORA:-0.867011288693;NKX3-1:-0.869972987221;MYFfamily:-0.883056903391;NKX2-3_NKX2-5:-0.887398777421;NR1H4:-0.892113920308;TFAP4:-0.900159918867;IKZF1:-0.917128399388;TBX4,5:-0.932906667491;PAX5:-0.939173342257;TFCP2:-0.94904753957;ATF2:-0.95285781636;TBP:-0.963139126742;PBX1:-0.98812334032;SP1:-1.01279374524;FOXA2:-1.02256010302;ZNF384:-1.06704760943;HES1:-1.07791961696;MZF1:-1.08785424785;VSX1,2:-1.09143069227;EVI1:-1.11377116489;NRF1:-1.12673047929;ATF6:-1.13453279083;CUX2:-1.1406186047;ZBTB6:-1.14141219977;SNAI1..3:-1.16067892377;T:-1.17324260602;ZFP161:-1.18714938037;REST:-1.18737764177;NANOG:-1.19745461527;SMAD1..7,9:-1.21650062972;PAX8:-1.22539467212;MTF1:-1.24420793121;CDC5L:-1.27817887278;ZNF143:-1.34830840469;FOXD3:-1.36157032042;EGR1..3:-1.36789844525;XCPE1{core}:-1.36992011758;ZIC1..3:-1.37392069117;ONECUT1,2:-1.3814919186;GATA4:-1.38759034516;TP53:-1.38905292824;SOX{8,9,10}:-1.4077350489;GFI1B:-1.41940669164;NHLH1,2:-1.43160455433;MTE{core}:-1.44004776717;CRX:-1.46032353187;MED-1{core}:-1.4688423431;BREu{core}:-1.50648340489;LEF1_TCF7_TCF7L1,2:-1.50967230126;ADNP_IRX_SIX_ZHX:-1.51029685695;CDX1,2,4:-1.51705872601;HSF1,2:-1.53705367446;TFAP2B:-1.55726507881;SOX5:-1.57276332658;HIF1A:-1.57905035686;ZNF238:-1.63595863268;HOXA9_MEIS1:-1.65686196207;GTF2I:-1.65814364154;RXR{A,B,G}:-1.65864381136;RREB1:-1.68258162739;PAX6:-1.68886910232;PATZ1:-1.76704613538;STAT1,3:-1.77134230795;HMGA1,2:-1.7719788236;MAZ:-1.78469117007;MYBL2:-1.80552344285;UFEwm:-1.81869651898;RBPJ:-1.81893993488;ESR1:-1.8578847206;AHR_ARNT_ARNT2:-1.8647351869;DBP:-1.87445836556;HAND1,2:-1.90281215744;TFAP2{A,C}:-1.9337691816;GTF2A1,2:-1.98753211468;PDX1:-2.00132594219;TLX1..3_NFIC{dimer}:-2.02776602508;NKX3-2:-2.08322790547;KLF4:-2.11329506456;TEAD1:-2.14647684581;GZF1:-2.30213476041;bHLH_family:-2.3784310811;HMX1:-2.49538876683;HIC1:-2.53624581581;TOPORS:-2.54597498301;RXR{A,B,G}_{NR1H2,PPAR}dimers:-2.76325679485;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-2.92790343152;GCM1,2:-3.25348348357 | ||
|xref= | |||
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_mouse;search_select_hide=table111:12164-128H4;search_select_hide=table117:12164-128H4 | |||
}} | }} |
Latest revision as of 18:32, 4 June 2020
Name: | MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS) |
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Species: | Mouse (Mus musculus) |
Library ID: | CNhs12543 |
Sample type: | primary cells |
Genomic View: | UCSC |
CAGEd-oPOSSUM: | link |
ZENBU report : | link |
Additional information | ||||||||||||||||||||||||||||
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Sample information
RNA information
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CAGE Accession numbers | ||||||||||||||||||||||||||||||||||||||||||||||
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Download raw sequence, BAM & CTSS | ||||||||||||||
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Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
CNhs12543
0 | 0 |
1 | 0 |
10 | 0 |
100 | 0 |
1000 | -0.0355 |
1001 | -0.0749 |
1002 | -0.116 |
1003 | -0.175 |
1004 | 0 |
1005 | 1.149 |
1006 | -0.143 |
1007 | -0.0702 |
1008 | 0 |
1009 | -0.2 |
101 | -0.32 |
1010 | 0 |
1011 | -0.0992 |
1012 | 0 |
1013 | -0.101 |
1014 | -0.0874 |
1015 | -0.303 |
1016 | -0.594 |
1017 | 0 |
1018 | 0 |
1019 | 0 |
102 | 0 |
1020 | 0 |
1021 | -0.0487 |
1022 | -0.315 |
1023 | 0.535 |
1024 | -0.14 |
1025 | -0.0611 |
1026 | 0 |
1027 | -0.048 |
1028 | 0 |
1029 | -0.115 |
103 | -0.0861 |
1030 | 0 |
1031 | -0.911 |
1032 | -0.831 |
1033 | 0.105 |
1034 | 0 |
1035 | 0 |
1036 | 0.0567 |
1037 | 0 |
1038 | -0.545 |
1039 | -0.549 |
104 | 0 |
1040 | -0.436 |
1041 | 0 |
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs12543
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs12543
Novel motif | Logo | P-value |
---|---|---|
1 | 1 | 0.188 |
10 | 10 | 0.0603 |
100 | 100 | 0.612 |
101 | 101 | 0.716 |
102 | 102 | 0.319 |
103 | 103 | 0.2 |
104 | 104 | 0.713 |
105 | 105 | 0.489 |
106 | 106 | 0.0611 |
107 | 107 | 0.579 |
108 | 108 | 0.923 |
109 | 109 | 0.0518 |
11 | 11 | 0.0741 |
110 | 110 | 0.228 |
111 | 111 | 0.579 |
112 | 112 | 0.0345 |
113 | 113 | 0.87 |
114 | 114 | 0.0864 |
115 | 115 | 0.894 |
116 | 116 | 0.977 |
117 | 117 | 2.76422e-4 |
118 | 118 | 0.475 |
119 | 119 | 0.447 |
12 | 12 | 0.437 |
120 | 120 | 0.0431 |
121 | 121 | 0.575 |
122 | 122 | 0.388 |
123 | 123 | 0.367 |
124 | 124 | 0.845 |
125 | 125 | 0.16 |
126 | 126 | 0.497 |
127 | 127 | 0.221 |
128 | 128 | 0.0989 |
129 | 129 | 0.451 |
13 | 13 | 0.0852 |
130 | 130 | 0.474 |
131 | 131 | 0.701 |
132 | 132 | 0.852 |
133 | 133 | 0.0897 |
134 | 134 | 0.947 |
135 | 135 | 0.287 |
136 | 136 | 0.409 |
137 | 137 | 0.0688 |
138 | 138 | 0.283 |
139 | 139 | 0.0331 |
14 | 14 | 0.318 |
140 | 140 | 0.762 |
141 | 141 | 0.697 |
142 | 142 | 0.0537 |
143 | 143 | 0.00117 |
144 | 144 | 0.771 |
145 | 145 | 0.129 |
146 | 146 | 0.909 |
147 | 147 | 0.649 |
148 | 148 | 0.184 |
149 | 149 | 0.964 |
15 | 15 | 0.0377 |
150 | 150 | 0.394 |
151 | 151 | 0.179 |
152 | 152 | 0.245 |
153 | 153 | 0.215 |
154 | 154 | 0.778 |
155 | 155 | 0.435 |
156 | 156 | 0.00609 |
157 | 157 | 0.798 |
158 | 158 | 0.027 |
159 | 159 | 0.623 |
160 | 160 | 0.851 |
161 | 161 | 0.109 |
162 | 162 | 0.631 |
163 | 163 | 0.271 |
164 | 164 | 0.0259 |
165 | 165 | 0.138 |
166 | 166 | 0.656 |
167 | 167 | 0.722 |
168 | 168 | 0.214 |
169 | 169 | 0.0118 |
17 | 17 | 0.175 |
18 | 18 | 0.165 |
19 | 19 | 0.476 |
2 | 2 | 0.335 |
20 | 20 | 0.0539 |
21 | 21 | 0.458 |
22 | 22 | 0.348 |
23 | 23 | 0.257 |
24 | 24 | 0.186 |
25 | 25 | 0.264 |
26 | 26 | 0.199 |
27 | 27 | 0.731 |
28 | 28 | 0.0835 |
29 | 29 | 0.0201 |
3 | 3 | 0.0587 |
30 | 30 | 0.521 |
31 | 31 | 0.68 |
32 | 32 | 0.709 |
33 | 33 | 0.241 |
34 | 34 | 0.868 |
35 | 35 | 0.587 |
36 | 36 | 0.178 |
37 | 37 | 0.0745 |
38 | 38 | 0.354 |
39 | 39 | 0.898 |
4 | 4 | 0.779 |
40 | 40 | 0.254 |
41 | 41 | 0.0123 |
42 | 42 | 0.277 |
43 | 43 | 0.131 |
44 | 44 | 0.797 |
45 | 45 | 0.768 |
46 | 46 | 0.354 |
47 | 47 | 0.326 |
48 | 48 | 0.215 |
49 | 49 | 0.102 |
5 | 5 | 0.0935 |
50 | 50 | 0.791 |
51 | 51 | 0.864 |
52 | 52 | 0.883 |
53 | 53 | 0.555 |
54 | 54 | 0.684 |
55 | 55 | 0.489 |
56 | 56 | 0.209 |
57 | 57 | 0.861 |
58 | 58 | 0.189 |
59 | 59 | 0.445 |
6 | 6 | 0.708 |
60 | 60 | 0.187 |
61 | 61 | 0.19 |
62 | 62 | 0.101 |
63 | 63 | 0.6 |
64 | 64 | 0.657 |
65 | 65 | 0.312 |
66 | 66 | 0.592 |
67 | 67 | 0.18 |
68 | 68 | 0.992 |
69 | 69 | 0.625 |
7 | 7 | 0.136 |
70 | 70 | 0.0394 |
71 | 71 | 0.0692 |
72 | 72 | 0.171 |
73 | 73 | 0.0446 |
74 | 74 | 0.121 |
75 | 75 | 0.00371 |
76 | 76 | 0.156 |
77 | 77 | 0.984 |
78 | 78 | 0.113 |
79 | 79 | 0.829 |
8 | 8 | 0.373 |
80 | 80 | 0.0366 |
81 | 81 | 0.511 |
82 | 82 | 0.4 |
83 | 83 | 0.788 |
84 | 84 | 0.925 |
85 | 85 | 0.165 |
86 | 86 | 0.089 |
87 | 87 | 0.197 |
88 | 88 | 0.468 |
89 | 89 | 0.77 |
9 | 9 | 0.483 |
90 | 90 | 0.106 |
91 | 91 | 0.45 |
92 | 92 | 0.478 |
93 | 93 | 0.389 |
94 | 94 | 0.0652 |
95 | 95 | 0.0115 |
96 | 96 | 0.845 |
97 | 97 | 0.914 |
98 | 98 | 0.348 |
99 | 99 | 0.221 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs12543
FANTOM5 (FF) ontology
Direct parent terms
is_a relathionship
EFO:0002091 biological replicate
FF:0000002 in vivo cell sample
FF:0000103 mouse sample
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
FF: FANTOM5
0000102 (sample by type)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000103 (mouse sample)
0000001 (sample)
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
NA