FF:413-26A8: Difference between revisions
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{{f5samples | {{f5samples | ||
|ancestors_in_anatomy_facet=UBERON: | |DRA_sample_Accession=CAGE@SAMD00005821 | ||
|accession_numbers=CAGE;DRX008966;DRR009840;DRZ001265;DRZ002648;DRZ012615;DRZ013998 | |||
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0000922,UBERON:0002102,UBERON:0000479,UBERON:0000026,UBERON:0000475,UBERON:0004120,UBERON:0000061,UBERON:0000465,UBERON:0001062,UBERON:0004708,UBERON:0002101,UBERON:0004710,UBERON:0010317,UBERON:0010707,UBERON:0000153,UBERON:0010708 | |||
|ancestors_in_cell_lineage_facet= | |ancestors_in_cell_lineage_facet= | ||
|ancestors_in_disease_facet= | |ancestors_in_disease_facet= | ||
|ancestors_in_ff_facet=FF:0000102,FF:0000101,FF:0000103,FF:0000001,FF:0000999,FF:0000292,FF:0000004,FF:0000296,FF:0011342 | |||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
|creation_date= | |creation_date= | ||
|data_phase=2 | |||
|datafreeze_phase=2 | |||
|def= | |def= | ||
|expression_enrichment_score=chr12:34642510..34642530,+!p1@Twist1!2.13!405.73!Twist1;;chr2:74513125..74513143,+!p1@Hoxd12!1.71!49.98!Hoxd12;;chr6:52190467..52190500,-!p1@Hoxa10!1.68!46.69!Hoxa10;;chr1:165243591..165243625,-!p2@Prrx1!1.67!68.61!Prrx1;;chr1:136186574..136186592,+!p1@Myog!1.57!35.95!Myog;;chr3:99057269..99057306,+!p1@Tbx15!1.56!42.96!Tbx15;;chr8:59799772..59799789,+!p1@Hand2!1.50!86.36!Hand2;;chr1:140739014..140739032,-!p1@Lhx9!1.48!36.82!Lhx9;;chr6:52184901..52184959,-!p2@Hoxa10!1.46!28.06!Hoxa10;;chr7:53631837..53631850,+!p1@Myod1!1.45!26.96!Myod1;;chr12:37835120..37835133,+!p2@Meox2!1.42!35.51!Meox2;;chr12:74147689..74147711,-!p1@Six1!1.40!52.17!Six1;;chr1:165243379..165243402,-!p3@Prrx1!1.34!30.91!Prrx1;;chr6:52176164..52176195,-!p1@Hoxa9!1.34!25.87!Hoxa9;;chr5:38215819..38215823,-!p1@Msx1!1.32!51.51!Msx1;;chr12:37835141..37835194,+!p1@Meox2!1.30!58.31!Meox2;;chr9:87626083..87626108,-!p1@Tbx18!1.29!40.33!Tbx18;;chr13:53568104..53568156,-!p1@Msx2!1.29!26.96!Msx2;;chr13:40829137..40829205,-!p1@Tfap2a!1.28!20.39!Tfap2a;;chr6:52195795..52195825,-!p1@Hoxa11!1.27!17.54!Hoxa11;;chr16:25801993..25802014,+!p1@Trp63!1.26!17.32!Trp63;;chr3:66785857..66785873,-!p1@Shox2!1.26!17.10!Shox2;;chr19:25746898..25746910,+!p1@Dmrt2!1.25!24.77!Dmrt2;;chr10:12810631..12810649,+!p1@Plagl1!1.23!412.31!Plagl1;;chr15:102087737..102087801,-!p3@Rarg!1.22!25.65!Rarg;;chr4:135129538..135129558,-!p1@Grhl3!1.22!23.67!Grhl3;;chr6:52195763..52195792,-!p2@Hoxa11!1.22!15.56!Hoxa11;;chr13:72766250..72766273,+!p1@Irx2!1.21!23.45!Irx2;;chr5:120285144..120285160,+!p1@Tbx5!1.17!13.81!Tbx5;;chr2:74520048..74520064,+!p1@Hoxd11!1.17!13.81!Hoxd11;;chr11:101755669..101755686,-!p1@Meox1!1.14!23.02!Meox1;;chr11:121380640..121380655,-!p1@Zfp750!1.12!20.39!Zfp750;;chr7:144505957..144505972,-!p2@Ebf3!1.11!14.69!Ebf3;;chr14:56443806..56443848,+!p1@Nfatc4!1.10!23.67!Nfatc4;;chr13:72101178..72101203,-!p1@Irx1!1.10!17.97!Irx1;;chr6:52210774..52210787,-!p1@Hoxa13!1.10!11.62!Hoxa13;;chr15:76287876..76287894,+!p1@Scx!1.09!61.59!Scx;;chr18:7004715..7004731,-!p1@Mkx!1.08!26.52!Mkx;;chr2:120365588..120365602,-!p2@Zfp106!1.07!17.97!Zfp106;;chr13:83643159..83643226,+!p3@Mef2c!1.07!10.74!Mef2c;;chr15:35225845..35225867,+!p1@Osr2!1.06!26.52!Osr2;;chr10:126778916..126778974,-!p1@Gli1!1.06!23.67!Gli1;;chr17:86087592..86087615,-!p1@Six2!1.06!10.52!Six2;;chr12:37835203..37835218,+!p3@Meox2!1.05!12.27!Meox2;;chr12:34642682..34642753,+!p2@Twist1!1.04!26.52!Twist1;;chr6:6832076..6832092,-!p1@Dlx5!1.04!11.84!Dlx5;;chr12:28027561..28027591,-!p1@Sox11!1.03!64.01!Sox11;;chr12:3891810..3891829,+!p2@Dnmt3a!1.03!15.12!Dnmt3a;;chr12:37835248..37835260,+!p4@Meox2!1.03!9.64!Meox2;;chr2:30700788..30700824,+!p2@Prrx2!1.02!14.47!Prrx2;;chr18:80909801..80909819,-!p1@Nfatc1!1.01!55.02!Nfatc1;;chr3:99057256..99057268,+!p3@Tbx15!1.01!9.21!Tbx15;;chr12:9581262..9581282,+!p1@Osr1!0.99!108.72!Osr1;;chr13:72766279..72766296,+!p2@Irx2!0.99!13.15!Irx2;;chr13:72101161..72101177,-!p2@Irx1!0.99!12.27!Irx1;;chr10:119914001..119914078,-!p4@Hmga2!0.99!12.06!Hmga2;;chr6:52190668..52190682,-!p3@Hoxa10!0.99!8.77!Hoxa10;;chr1:93698030..93698064,+!p1@Twist2!0.98!17.54!Twist2;;chr2:38206744..38206766,+!p1@Lhx2!0.98!10.52!Lhx2;;chr2:74506264..74506286,+!p1@Hoxd13!0.98!8.55!Hoxd13;;chr10:119913278..119913298,-!p2@Hmga2!0.97!19.07!Hmga2;;chr19:59533221..59533271,+!p1@Emx2!0.96!10.08!Emx2;;chr10:119913310..119913366,-!p1@Hmga2!0.95!63.35!Hmga2;;chr1:93698068..93698085,+!p2@Twist2!0.95!9.43!Twist2;;chr2:74520343..74520383,+!p4@Hoxd11!0.95!7.89!Hoxd11;;chr10:119913546..119913583,-!p3@Hmga2!0.94!16.44!Hmga2;;chr11:94981424..94981439,+!p1@Dlx3!0.94!8.77!Dlx3;;chr6:52210816..52210831,-!p2@Hoxa13!0.94!7.67!Hoxa13;;chr9:71743854..71743909,-!p1@Tcf12!0.93!62.25!Tcf12;;chr14:67853425..67853454,+!p1@Ebf2!0.93!10.96!Ebf2;;chr10:106923133..106923146,-!p1@Myf5!0.93!7.45!Myf5;;chr7:144506077..144506128,-!p1@Ebf3!0.92!17.54!Ebf3;;chr1:19199236..19199258,+!p1@Tfap2b!0.92!7.23!Tfap2b;;chr7:6649134..6649167,-!p1@Zim1!0.91!40.33!Zim1;;chr2:30700881..30700916,+!p1@Prrx2!0.91!13.81!Prrx2;;chr7:144505980..144506010,-!p3@Ebf3!0.91!8.77!Ebf3;;chr1:169528720..169528749,+!p6@Rxrg!0.90!7.01!Rxrg;;chr2:30700857..30700873,+!p3@Prrx2!0.89!9.43!Prrx2;;chr6:6831950..6831985,-!p2@Dlx5!0.89!7.45!Dlx5;;chr1:165243653..165243664,-!p4@Prrx1!0.88!9.43!Prrx1;;chr3:107398056..107398082,+!p1@Alx3!0.88!6.58!Alx3;;chr15:102751603..102751630,+!p1@Hoxc13!0.88!6.58!Hoxc13;;chr1:165243792..165243808,-!p1@Prrx1!0.87!23.89!Prrx1;;chr14:67853457..67853482,+!p2@Ebf2!0.86!8.99!Ebf2;;chr8:94881733..94881790,+!p1@Irx5!0.85!12.49!Irx5;;chr12:57796615..57796687,+!p1@Pax9!0.85!6.14!Pax9;;chr11:121380594..121380609,-!p2@Zfp750!0.84!10.52!Zfp750;;chr12:3891753..3891801,+!p4@Dnmt3a!0.84!10.08!Dnmt3a;;chr2:38206580..38206600,+!p2@Lhx2!0.84!7.45!Lhx2;;chr1:136186545..136186554,+!p2@Myog!0.84!5.92!Myog;;chr7:53631818..53631829,+!p2@Myod1!0.83!5.70!Myod1;;chr6:6831928..6831949,-!p3@Dlx5!0.83!5.70!Dlx5;;chr9:31720843..31720888,-!p1@Barx2!0.82!6.36!Barx2;;chr14:56443781..56443800,+!p3@Nfatc4!0.81!7.23!Nfatc4;;chr7:123182248..123182264,-!p3@Sox6!0.81!6.58!Sox6;;chr5:42155788..42155800,-!p1@Nkx3-2!0.81!5.48!Nkx3-2;;chr9:43013917..43013968,-!p1@Pou2f3!0.81!5.48!Pou2f3;;chrX:55283799..55283813,+!p1@Zic3!0.81!5.48!Zic3;;chr2:74513064..74513089,+!p2@Hoxd12!0.81!5.48!Hoxd12;;chr13:15555670..15555771,+!p2@Gli3!0.80!14.25!Gli3;;chr6:14851440..14851497,+!p2@Foxp2!0.80!13.81!Foxp2;;chr5:120285161..120285176,+!p2@Tbx5!0.80!5.26!Tbx5;;chr7:56892217..56892221,-!p1@Dbx1!0.80!5.26!Dbx1;;chr1:19202352..19202354,+!p2@Tfap2b!0.80!5.26!Tfap2b;;chr17:25707623..25707639,-!p1@Sox8!0.79!24.11!Sox8;;chrX:98449898..98449913,+!p2@Foxo4!0.79!17.97!Foxo4;;chr13:31717548..31717596,+!p1@Foxf2!0.79!10.74!Foxf2;;chr4:134708451..134708469,+!p1@Runx3!0.79!9.64!Runx3;;chr13:72101141..72101158,-!p3@Irx1!0.79!6.58!Irx1;;chr1:14746065..14746079,-!p1@Msc!0.79!6.36!Msc;;chr6:52163319..52163342,-!p1@Hoxa3!0.78!7.67!Hoxa3;;chr7:19608891..19608895,-!p1@Foxa3!0.78!6.80!Foxa3;;chr2:147190749..147190769,+!p1@Pax1!0.78!5.04!Pax1;;chr3:66785181..66785199,-!p2@Shox2!0.78!5.04!Shox2;;chr12:109242266..109242295,-!p1@Bcl11b!0.77!45.37!Bcl11b;;chr3:99044284..99044308,+!p4@Tbx15!0.77!4.82!Tbx15;;chr9:87625971..87625992,-!p2@Tbx18!0.77!4.82!Tbx18;;chr13:31898729..31898761,+!p1@Foxc1!0.76!12.49!Foxc1;;chr15:102087880..102087927,-!p2@Rarg!0.75!11.40!Rarg;;chr1:93698095..93698113,+!p3@Twist2!0.75!5.70!Twist2;;chr8:94881872..94881887,+!p2@Irx5!0.75!5.04!Irx5;;chr1:19199095..19199114,+!p5@Tfap2b!0.75!4.60!Tfap2b;;chr1:19199221..19199234,+!p6@Tfap2b!0.75!4.60!Tfap2b;;chr2:167363692..167363710,+!p1@Snai1!0.74!60.72!Snai1;;chr15:50720601..50720630,-!p2@Trps1!0.74!11.62!Trps1;;chr8:111227493..111227517,+!p@chr8:111227493..111227517,+!0.74!8.33!Zfhx3;;chr2:71384802..71384815,-!p1@Dlx2!0.74!5.70!Dlx2;;chr17:44951553..44951586,-!p2@Runx2!0.74!5.04!Runx2;;chr11:112643496..112643562,+!p1@Sox9!0.73!183.69!Sox9;;chr7:17647736..17647772,-!p1@Hif3a!0.73!16.88!Hif3a;;chr11:44430877..44430899,+!p6@Ebf1!0.73!5.70!Ebf1;;chr14:67853632..67853674,+!p3@Ebf2!0.73!5.48!Ebf2;;chr13:40825465..40825469,-!p2@Tfap2a!0.73!4.38!Tfap2a;;chr6:52195747..52195762,-!p3@Hoxa11!0.73!4.38!Hoxa11;;chr19:59533429..59533470,+!p4@Emx2!0.73!4.38!Emx2;;chr12:9581284..9581303,+!p2@Osr1!0.72!8.77!Osr1;;chr13:31898767..31898785,+!p4@Foxc1!0.72!5.26!Foxc1;;chr11:74981654..74981658,-!p1@Hic1!0.71!18.41!Hic1;;chr3:5218629..5218684,+!p1@Zfhx4!0.71!14.69!Zfhx4;;chr8:111227354..111227401,+!p@chr8:111227354..111227401,+!0.71!5.70!Zfhx3;;chr13:83643232..83643254,+!p5@Mef2c!0.71!4.16!Mef2c;;chr2:74529970..74529997,+!p1@Hoxd10!0.71!4.16!Hoxd10;;chr6:52184880..52184893,-!p6@Hoxa10!0.71!4.16!Hoxa10;;chr7:52471143..52471186,+!p1@Tead2!0.70!48.44!Tead2;;chr1:165243638..165243649,-!p5@Prrx1!0.70!5.04!Prrx1;;chr4:135129447..135129467,-!p2@Grhl3!0.70!5.04!Grhl3;;chr4:154010409..154010466,-!p2@Prdm16!0.69!10.08!Prdm16;;chr16:18587076..18587106,-!p1@Tbx1!0.69!5.92!Tbx1;;chr6:52190858..52190873,-!p4@Hoxa10!0.69!3.95!Hoxa10;;chr5:120285130..120285141,+!p3@Tbx5!0.69!3.95!Tbx5;;chr6:30908793..30908815,-!p1@Klf14!0.69!3.95!Klf14;;chr16:14705925..14705951,+!p1@Snai2!0.68!30.03!Snai2;;chrX:45245679..45245702,-!p1@Smarca1!0.68!19.29!Smarca1;;chr7:19679964..19679982,+!p1@Six5!0.68!12.06!Six5;;chrX:45245644..45245666,-!p2@Smarca1!0.67!13.37!Smarca1;;chr11:44430989..44431015,+!p4@Ebf1!0.67!7.01!Ebf1;;chr8:111227455..111227464,+!p@chr8:111227455..111227464,+!0.67!4.82!Zfhx3;;chr13:40826150..40826167,-!p3@Tfap2a!0.67!4.16!Tfap2a;;chr15:95485240..95485257,-!p1@Dbx2!0.67!3.73!Dbx2;;chr2:172375081..172375105,+!p1@Tfap2c!0.67!3.73!Tfap2c;;chr2:30700830..30700843,+!p4@Prrx2!0.67!3.73!Prrx2;;chr2:33496386..33496410,-!p1@Lmx1b!0.67!3.73!Lmx1b;;chr4:84320893..84320910,-!p1@Bnc2!0.66!8.77!Bnc2;;chr3:5218516..5218544,+!p2@Zfhx4!0.66!5.70!Zfhx4;;chr2:70313168..70313184,+!p1@Sp5!0.66!5.70!Sp5;;chr12:9581317..9581333,+!p3@Osr1!0.66!5.70!Osr1;;chr5:24107676..24107722,-!p4@Smarcd3!0.66!5.04!Smarcd3;;chr4:3865501..3865548,-!p1@Plag1!0.65!20.39!Plag1;;chr15:50721942..50721987,-!p13@Trps1!0.65!4.16!Trps1;;chr13:53568191..53568219,-!p2@Msx2!0.65!3.51!Msx2;;chr13:53568081..53568094,-!p3@Msx2!0.65!3.51!Msx2;;chr2:74499300..74499309,-!p@chr2:74499300..74499309,-!0.65!3.51!Evx2;;chr4:139388835..139388867,-!p1@Pax7!0.65!3.51!Pax7;;chr1:19199119..19199134,+!p4@Tfap2b!0.65!3.51!Tfap2b;;chr11:21901608..21901634,-!p1@Otx1!0.65!3.51!Otx1;;chr5:42155277..42155281,-!p2@Nkx3-2!0.65!3.51!Nkx3-2;;chr6:52176144..52176161,-!p2@Hoxa9!0.65!3.51!Hoxa9;;chrX:55284180..55284195,+!p2@Zic3!0.65!3.51!Zic3;;chr17:48061584..48061601,-!p2@Foxp4!0.64!25.21!Foxp4;;chrX:48558950..48559016,-!p1@Mbnl3!0.64!12.06!Mbnl3;;chr17:28487603..28487626,-!p2@Tead3!0.64!7.89!Tead3;;chr4:13712228..13712267,+!p3@Runx1t1!0.64!6.36!Runx1t1;;chr11:23977742..23977794,+!p6@Bcl11a!0.64!4.38!Bcl11a;;chr17:37139472..37139514,+!p1@Zfp57!0.63!26.08!Zfp57;;chr1:120949949..120950000,-!p1@Gli2!0.63!16.44!Gli2;;chr8:111227518..111227550,+!p@chr8:111227518..111227550,+!0.63!6.14!Z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chr2:172375136..172375149,+!p2@Tfap2c!0.32!1.10!Tfap2c;;chr2:168032254..168032259,-!p6@Adnp!0.32!1.10!Adnp;;chr1:19202185..19202187,+!p9@Tfap2b!0.32!1.10!Tfap2b;;chr1:122499088..122499099,+!p2@En1!0.32!1.10!En1;;chr11:23978291..23978323,+!p7@Bcl11a!0.32!1.10!Bcl11a;;chr11:44431115..44431132,+!p9@Ebf1!0.32!1.10!Ebf1;;chr10:119913301..119913302,-!p11@Hmga2!0.32!1.10!Hmga2;;chr10:126778639..126778670,-!p3@Gli1!0.32!1.10!Gli1;;chr5:77694479..77694574,+!p1@Rest!0.31!39.24!Rest;;chr12:12948633..12948651,-!p1@Mycn!0.31!17.10!Mycn;;chr7:134169762..134169795,-!p3@Maz!0.31!16.00!Maz;;chr8:107694628..107694659,+!p1@Cbfb!0.31!15.78!Cbfb;;chr19:55816770..55816793,+!p2@Tcf7l2!0.31!15.34!Tcf7l2;;chr19:26822880..26822964,+!p2@Smarca2!0.31!15.12!Smarca2;;chr1:194979315..194979359,+!p1@Irf6!0.31!10.52!Irf6;;chr17:35031460..35031518,+!p1@Zbtb12!0.31!8.77!Zbtb12;;chr11:62545367..62545412,-!p1@Zfp287!0.31!6.80!Zfp287;;chr7:25292141..25292158,+!p2@Zfp428!0.31!5.70!Zfp428;;chr4:87678709..87678726,-!p4@Mllt3!0.31!5.04!Mllt3;;chr18:84255771..84255795,-!p3@Tshz1!0.31!4.82!Tshz1;;chr4:82151148..82151159,-!p5@Nfib!0.31!4.60!Nfib;;chr13:67182439..67182491,-!p2@Zfp708!0.31!3.95!Zfp708;;chr4:154010940..154010962,-!p3@Prdm16!0.31!3.29!Prdm16;;chr9:63869729..63869749,-!p4@Smad6!0.31!2.85!Smad6;;chr1:120949925..120949947,-!p4@Gli2!0.31!2.85!Gli2;;chr7:91558631..91558652,-!p3@Arnt2!0.31!1.97!Arnt2;;chr6:52154386..52154407,-!p2@Hoxa5!0.31!1.53!Hoxa5;;chr4:55545051..55545110,-!p2@Klf4!0.31!1.53!Klf4;;chr12:25257176..25257190,+!p3@Grhl1!0.31!1.32!Grhl1;;chr19:55816300..55816332,+!p1@Tcf7l2!0.30!85.05!Tcf7l2;;chr4:154597177..154597195,-!p1@Ski!0.30!69.49!Ski;;chr7:30880169..30880211,+!p1@Zfp260!0.30!57.87!Zfp260;;chr17:28487692..28487765,-!p1@Tead3!0.30!35.07!Tead3;;chr2:160192793..160192809,-!p1@Mafb!0.30!26.96!Mafb;;chr10:79862134..79862173,-!p3@Mbd3!0.30!13.81!Mbd3;;chr5:120121020..120121049,+!p1@Tbx3!0.30!10.30!Tbx3;;chr4:62626594..62626651,+!p1@Zfp618!0.30!6.14!Zfp618;;chr4:97444261..97444272,+!p9@Nfia!0.30!3.51!Nfia;;chr6:116578939..116578952,-!p2@Zfp422!0.30!3.51!Zfp422;;chr1:170361826..170361844,-!p9@Pbx1!0.30!3.29!Pbx1;;chr16:8672256..8672279,-!p1@Carhsp1,p1@Gm9791!0.30!3.29!Carhsp1;;chr4:54960387..54960415,+!p4@Zfp462!0.30!3.07!Zfp462;;chr17:37140628..37140631,+!p2@Zfp57!0.30!2.85!Zfp57;;chr19:26681721..26681746,+!p9@Smarca2!0.30!2.85!Smarca2;;chr6:38204274..38204327,-!p3@D630045J12Rik!0.30!2.85!D630045J12Rik;;chr13:96095097..96095114,+!p5@Zbed3!0.30!2.41!Zbed3;;chr10:44178521..44178557,-!p1@Prdm1!0.30!2.41!Prdm1;;chr9:106356265..106356276,+!p4@Pcbp4!0.30!2.19!Pcbp4;;chr2:151969288..151969294,+!p1@Tcf15!0.30!1.97!Tcf15;;chr14:76904313..76904328,+!p1@Tsc22d1!0.29!341.95!Tsc22d1;;chr17:27693558..27693580,+!p1@Hmga1-rs1,p1@Hmga1!0.29!81.10!Hmga1;;chr6:48395743..48395820,-!p1@Zfp467!0.29!37.26!Zfp467;;chr17:71200529..71200556,-!p1@Tgif1!0.29!28.06!Tgif1;;chr14:65977324..65977372,+!p2@Zfp395!0.29!9.43!Zfp395;;chr7:134169741..134169760,-!p10@Maz!0.29!4.60!Maz;;chr10:114821393..114821431,-!p5@Thap2!0.29!4.16!Thap2;;chr7:148008023..148008092,-!p1@Zfp941!0.29!3.51!Zfp941;;chr8:72498246..72498263,-!p11@Gatad2a!0.29!3.29!Gatad2a;;chr8:87324292..87324303,-!p4@Nfix!0.29!3.29!Nfix;;chrX:48559079..48559108,-!p2@Mbnl3!0.29!3.29!Mbnl3;;chr13:31650026..31650045,+!p2@Foxq1!0.29!2.19!Foxq1;;chr8:72498017..72498059,-!p13@Gatad2a!0.29!2.19!Gatad2a;;chr6:146744595..146744613,+!p2@Arntl2!0.29!2.19!Arntl2;;chr6:128250521..128250543,-!p3@Tead4!0.29!1.97!Tead4;;chr17:37139455..37139469,+!p3@Zfp57!0.29!1.97!Zfp57;;chr19:7342786..7342803,+!p2@Rcor2!0.29!1.53!Rcor2;;chr4:13670441..13670463,+!p8@Runx1t1!0.29!1.32!Runx1t1;;chr13:55932591..55932622,-!p1@Pitx1!0.29!1.32!Pitx1;;chr9:63605740..63605771,-!p1@Smad3!0.28!24.55!Smad3;;chr13:44826937..44826952,+!p2@Jarid2!0.28!24.11!Jarid2;;chr6:47827642..47827707,+!p1@Zfp282!0.28!17.75!Zfp282;;chr9:113840108..113840184,+!p2@Ubp1!0.28!15.34!Ubp1;;chr5:39075982..39076052,-!p1@Zfp518b!0.28!11.84!Zfp518b;;chr4:118967125..118967143,-!p2@Ybx1!0.28!10.30!Ybx1;;chr12:75008946..75008957,+!p2@Hif1a!0.28!8.11!Hif1a;;chr17:48061605..48061629,-!p6@Foxp4!0.28!6.36!Foxp4;;chr15:75799717..75799742,+!p1@Zfp707!0.28!6.14!Zfp707;;chr7:30836380..30836430,-!p1@Zfp14!0.28!5.92!Zfp14;;chr15:57526469..57526534,+!p1@Zhx2!0.28!5.48!Zhx2;;chr9:39999893..39999922,+!p1@Zfp202!0.28!5.26!Zfp202;;chr7:35841581..35841605,-!p2@Cebpg!0.28!3.73!Cebpg;;chr6:115803317..115803361,-!p2@Mbd4!0.28!3.51!Mbd4;;chr5:65213356..65213412,+!p6@Klf3!0.28!2.85!Klf3;;chr17:32506357..32506377,-!p3@Wiz!0.28!2.85!Wiz;;chr17:27693746..27693759,+!p6@Hmga1-rs1,p7@Hmga1!0.28!2.63!Hmga1;;chrX:70587989..70588000,+!p3@Zfp275!0.28!2.63!Zfp275;;chr9:106356278..106356292,+!p3@Pcbp4!0.28!2.19!Pcbp4;;chr6:88143711..88143717,+!p2@Gata2!0.28!1.97!Gata2;;chr7:123177120..123177138,-!p10@Sox6!0.28!1.32!Sox6;;chr17:32967140..32967197,-!p1@Zfp799!0.27!22.58!Zfp799;;chr8:109620410..109620462,-!p1@Terf2!0.27!15.56!Terf2;;chr8:112229478..112229536,+!p1@Zfp821!0.27!14.03!Zfp821;;chr14:65977498..659775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52!Smad5;;chr18:5591866..5591900,+!p1@Zeb1!0.20!34.85!Zeb1;;chr5:53981692..53981768,+!p2@Rbpj!0.20!25.21!Rbpj;;chr1:33871252..33871313,-!p2@Zfp451!0.20!16.66!Zfp451;;chr10:85379647..85379751,-!p1@Prdm4!0.20!15.12!Prdm4;;chr7:24993112..24993158,-!p1@Zfp111!0.20!14.25!Zfp111;;chr17:46693107..46693137,-!p1@Srf!0.20!13.37!Srf;;chr4:133801453..133801492,-!p1@Zfp593!0.20!11.18!Zfp593;;chr7:30739068..30739108,-!p1@Zfp74!0.20!10.30!Zfp74;;chr14:98568971..98569025,-!p1@Dach1!0.20!10.30!Dach1;;chr4:97444012..97444045,+!p4@Nfia!0.20!10.08!Nfia;;chr16:17530781..17530882,-!p2@Thap7!0.20!7.89!Thap7;;chr7:25039763..25039831,+!p1@Zfp108!0.20!6.14!Zfp108;;chr14:100683672..100683717,-!p1@Klf12!0.20!5.92!Klf12;;chr9:63605978..63605997,-!p2@Smad3!0.20!4.82!Smad3;;chr15:103170533..103170556,-!p1@Zfp385a!0.20!4.60!Zfp385a;;chr4:150482563..150482655,-!p2@Camta1!0.20!4.38!Camta1;;chr3:51081199..51081228,-!p3@Elf2!0.20!4.38!Elf2;;chr10:13685585..13685645,+!p2@Hivep2!0.20!4.16!Hivep2;;chr18:5334765..5334833,-!p2@Zfp438!0.20!3.07!Zfp438;;chr1:33871319..33871333,-!p3@Zfp451!0.20!2.63!Zfp451;;chr15:50721544..50721558,-!p5@Trps1!0.20!2.41!Trps1;;chr2:153067079..153067090,-!p2@Plagl2!0.20!2.19!Plagl2;;chr5:120121169..120121171,+!p4@Tbx3!0.20!1.75!Tbx3;;chr7:134169459..134169468,-!p15@Maz!0.20!1.10!Maz;;chr6:72185179..72185196,-!p4@Atoh8!0.20!1.10!Atoh8;;chr1:194979361..194979373,+!p2@Irf6!0.20!1.10!Irf6;;chr5:138188180..138188203,+!p12@Tsc22d4!0.20!0.88!Tsc22d4;;chr15:61818859..61818873,+!p8@Myc!0.20!0.88!Myc;;chr4:126698555..126698583,+!p1@Sfpq!0.19!767.40!Sfpq;;chr16:95924055..95924077,+!p1@Ets2!0.19!76.06!Ets2;;chr9:110034519..110034606,+!p1@Smarcc1!0.19!59.84!Smarcc1;;chr4:118967105..118967123,-!p1@Ybx1!0.19!40.99!Ybx1;;chr16:20141134..20141213,+!p1@Yeats2!0.19!36.17!Yeats2;;chr7:30954720..30954785,-!p1@LOC677248,p1@Zfp146!0.19!35.95!Zfp146;;chr8:81923316..81923334,-!p1@Smad1!0.19!21.48!Smad1;;chr7:134376741..134376831,+!p1@Zfp553!0.19!17.75!Zfp553;;chr14:47896467..47896523,-!p1@Wdhd1!0.19!16.22!Wdhd1;;chr10:80893549..80893590,-!p2@Nfic!0.19!15.12!Nfic;;chr6:131338400..131338415,-!p3@Csda!0.19!13.81!Csda;;chr3:95032091..95032183,-!p1@Mllt11!0.19!11.18!Mllt11;;chr7:24919167..24919203,+!p1@Zfp235!0.19!9.43!Zfp235;;chr8:118230866..118230891,-!p4@Maf!0.19!8.55!Maf;;chr13:21622917..21622952,-!p1@Zfp192!0.19!8.55!Zfp192;;chr10:62328186..62328219,-!p1@Tet1!0.19!7.67!Tet1;;chr17:34784132..34784161,+!p1@Atf6b!0.19!7.23!Atf6b;;chr7:24919204..24919231,+!p2@Zfp235!0.19!7.01!Zfp235;;chr5:38611639..38611698,-!p1@Zbtb49!0.19!6.36!Zbtb49;;chr13:64254457..64254497,-!p1@Zfp367!0.19!5.48!Zfp367;;chr19:28085586..28085622,-!p3@Rfx3!0.19!5.26!Rfx3;;chr17:69732690..69732734,+!p1@Zfp161!0.19!4.82!Zfp161;;chr7:6124135..6124158,+!p2@Zfp444!0.19!4.60!Zfp444;;chr12:77470461..77470504,-!p3@Zbtb25!0.19!3.51!Zbtb25;;chr7:119822828..119822839,+!p4@Tead1!0.19!3.29!Tead1;;chr11:5761871..5761882,+!p3@Aebp1!0.19!2.85!Aebp1;;chr12:85657780..85657815,+!p2@Zfp410!0.19!2.85!Zfp410;;chr18:83080278..83080293,+!p5@Zfp516!0.19!2.41!Zfp516;;chr4:118846454..118846506,-!p2@Zfp691!0.19!2.41!Zfp691;;chr2:169458838..169458859,+!p4@Tshz2!0.19!1.97!Tshz2;;chr11:85646341..85646352,+!p3@Tbx2!0.19!1.97!Tbx2;;chr4:45024818..45024846,-!p4@Zbtb5!0.19!1.75!Zbtb5;;chr5:138187583..138187602,+!p6@Tsc22d4!0.19!1.75!Tsc22d4;;chr6:72185210..72185228,-!p3@Atoh8!0.19!1.53!Atoh8;;chr6:64992678..64992689,+!p3@Smarcad1!0.19!1.32!Smarcad1;;chr3:8667033..8667046,-!p3@Hey1!0.19!1.10!Hey1;;chr11:69393784..69393805,+!p3@Trp53!0.19!1.10!Trp53;;chr10:80809447..80809515,-!p5@Hmg20b!0.19!0.88!Hmg20b;;chr10:44178575..44178590,-!p5@Prdm1!0.19!0.88!Prdm1;; | |expression_enrichment_score=chr12:34642510..34642530,+!p1@Twist1!2.13!405.73!Twist1;;chr2:74513125..74513143,+!p1@Hoxd12!1.71!49.98!Hoxd12;;chr6:52190467..52190500,-!p1@Hoxa10!1.68!46.69!Hoxa10;;chr1:165243591..165243625,-!p2@Prrx1!1.67!68.61!Prrx1;;chr1:136186574..136186592,+!p1@Myog!1.57!35.95!Myog;;chr3:99057269..99057306,+!p1@Tbx15!1.56!42.96!Tbx15;;chr8:59799772..59799789,+!p1@Hand2!1.50!86.36!Hand2;;chr1:140739014..140739032,-!p1@Lhx9!1.48!36.82!Lhx9;;chr6:52184901..52184959,-!p2@Hoxa10!1.46!28.06!Hoxa10;;chr7:53631837..53631850,+!p1@Myod1!1.45!26.96!Myod1;;chr12:37835120..37835133,+!p2@Meox2!1.42!35.51!Meox2;;chr12:74147689..74147711,-!p1@Six1!1.40!52.17!Six1;;chr1:165243379..165243402,-!p3@Prrx1!1.34!30.91!Prrx1;;chr6:52176164..52176195,-!p1@Hoxa9!1.34!25.87!Hoxa9;;chr5:38215819..38215823,-!p1@Msx1!1.32!51.51!Msx1;;chr12:37835141..37835194,+!p1@Meox2!1.30!58.31!Meox2;;chr9:87626083..87626108,-!p1@Tbx18!1.29!40.33!Tbx18;;chr13:53568104..53568156,-!p1@Msx2!1.29!26.96!Msx2;;chr13:40829137..40829205,-!p1@Tfap2a!1.28!20.39!Tfap2a;;chr6:52195795..52195825,-!p1@Hoxa11!1.27!17.54!Hoxa11;;chr16:25801993..25802014,+!p1@Trp63!1.26!17.32!Trp63;;chr3:66785857..66785873,-!p1@Shox2!1.26!17.10!Shox2;;chr19:25746898..25746910,+!p1@Dmrt2!1.25!24.77!Dmrt2;;chr10:12810631..12810649,+!p1@Plagl1!1.23!412.31!Plagl1;;chr15:102087737..102087801,-!p3@Rarg!1.22!25.65!Rarg;;chr4:135129538..135129558,-!p1@Grhl3!1.22!23.67!Grhl3;;chr6:52195763..52195792,-!p2@Hoxa11!1.22!15.56!Hoxa11;;chr13:72766250..72766273,+!p1@Irx2!1.21!23.45!Irx2;;chr5:120285144..120285160,+!p1@Tbx5!1.17!13.81!Tbx5;;chr2:74520048..74520064,+!p1@Hoxd11!1.17!13.81!Hoxd11;;chr11:101755669..101755686,-!p1@Meox1!1.14!23.02!Meox1;;chr11:121380640..121380655,-!p1@Zfp750!1.12!20.39!Zfp750;;chr7:144505957..144505972,-!p2@Ebf3!1.11!14.69!Ebf3;;chr14:56443806..56443848,+!p1@Nfatc4!1.10!23.67!Nfatc4;;chr13:72101178..72101203,-!p1@Irx1!1.10!17.97!Irx1;;chr6:52210774..52210787,-!p1@Hoxa13!1.10!11.62!Hoxa13;;chr15:76287876..76287894,+!p1@Scx!1.09!61.59!Scx;;chr18:7004715..7004731,-!p1@Mkx!1.08!26.52!Mkx;;chr2:120365588..120365602,-!p2@Zfp106!1.07!17.97!Zfp106;;chr13:83643159..83643226,+!p3@Mef2c!1.07!10.74!Mef2c;;chr15:35225845..35225867,+!p1@Osr2!1.06!26.52!Osr2;;chr10:126778916..126778974,-!p1@Gli1!1.06!23.67!Gli1;;chr17:86087592..86087615,-!p1@Six2!1.06!10.52!Six2;;chr12:37835203..37835218,+!p3@Meox2!1.05!12.27!Meox2;;chr12:34642682..34642753,+!p2@Twist1!1.04!26.52!Twist1;;chr6:6832076..6832092,-!p1@Dlx5!1.04!11.84!Dlx5;;chr12:28027561..28027591,-!p1@Sox11!1.03!64.01!Sox11;;chr12:3891810..3891829,+!p2@Dnmt3a!1.03!15.12!Dnmt3a;;chr12:37835248..37835260,+!p4@Meox2!1.03!9.64!Meox2;;chr2:30700788..30700824,+!p2@Prrx2!1.02!14.47!Prrx2;;chr18:80909801..80909819,-!p1@Nfatc1!1.01!55.02!Nfatc1;;chr3:99057256..99057268,+!p3@Tbx15!1.01!9.21!Tbx15;;chr12:9581262..9581282,+!p1@Osr1!0.99!108.72!Osr1;;chr13:72766279..72766296,+!p2@Irx2!0.99!13.15!Irx2;;chr13:72101161..72101177,-!p2@Irx1!0.99!12.27!Irx1;;chr10:119914001..119914078,-!p4@Hmga2!0.99!12.06!Hmga2;;chr6:52190668..52190682,-!p3@Hoxa10!0.99!8.77!Hoxa10;;chr1:93698030..93698064,+!p1@Twist2!0.98!17.54!Twist2;;chr2:38206744..38206766,+!p1@Lhx2!0.98!10.52!Lhx2;;chr2:74506264..74506286,+!p1@Hoxd13!0.98!8.55!Hoxd13;;chr10:119913278..119913298,-!p2@Hmga2!0.97!19.07!Hmga2;;chr19:59533221..59533271,+!p1@Emx2!0.96!10.08!Emx2;;chr10:119913310..119913366,-!p1@Hmga2!0.95!63.35!Hmga2;;chr1:93698068..93698085,+!p2@Twist2!0.95!9.43!Twist2;;chr2:74520343..74520383,+!p4@Hoxd11!0.95!7.89!Hoxd11;;chr10:119913546..119913583,-!p3@Hmga2!0.94!16.44!Hmga2;;chr11:94981424..94981439,+!p1@Dlx3!0.94!8.77!Dlx3;;chr6:52210816..52210831,-!p2@Hoxa13!0.94!7.67!Hoxa13;;chr9:71743854..71743909,-!p1@Tcf12!0.93!62.25!Tcf12;;chr14:67853425..67853454,+!p1@Ebf2!0.93!10.96!Ebf2;;chr10:106923133..106923146,-!p1@Myf5!0.93!7.45!Myf5;;chr7:144506077..144506128,-!p1@Ebf3!0.92!17.54!Ebf3;;chr1:19199236..19199258,+!p1@Tfap2b!0.92!7.23!Tfap2b;;chr7:6649134..6649167,-!p1@Zim1!0.91!40.33!Zim1;;chr2:30700881..30700916,+!p1@Prrx2!0.91!13.81!Prrx2;;chr7:144505980..144506010,-!p3@Ebf3!0.91!8.77!Ebf3;;chr1:169528720..169528749,+!p6@Rxrg!0.90!7.01!Rxrg;;chr2:30700857..30700873,+!p3@Prrx2!0.89!9.43!Prrx2;;chr6:6831950..6831985,-!p2@Dlx5!0.89!7.45!Dlx5;;chr1:165243653..165243664,-!p4@Prrx1!0.88!9.43!Prrx1;;chr3:107398056..107398082,+!p1@Alx3!0.88!6.58!Alx3;;chr15:102751603..102751630,+!p1@Hoxc13!0.88!6.58!Hoxc13;;chr1:165243792..165243808,-!p1@Prrx1!0.87!23.89!Prrx1;;chr14:67853457..67853482,+!p2@Ebf2!0.86!8.99!Ebf2;;chr8:94881733..94881790,+!p1@Irx5!0.85!12.49!Irx5;;chr12:57796615..57796687,+!p1@Pax9!0.85!6.14!Pax9;;chr11:121380594..121380609,-!p2@Zfp750!0.84!10.52!Zfp750;;chr12:3891753..3891801,+!p4@Dnmt3a!0.84!10.08!Dnmt3a;;chr2:38206580..38206600,+!p2@Lhx2!0.84!7.45!Lhx2;;chr1:136186545..136186554,+!p2@Myog!0.84!5.92!Myog;;chr7:53631818..53631829,+!p2@Myod1!0.83!5.70!Myod1;;chr6:6831928..6831949,-!p3@Dlx5!0.83!5.70!Dlx5;;chr9:31720843..31720888,-!p1@Barx2!0.82!6.36!Barx2;;chr14:56443781..56443800,+!p3@Nfatc4!0.81!7.23!Nfatc4;;chr7:123182248..123182264,-!p3@Sox6!0.81!6.58!Sox6;;chr5:42155788..42155800,-!p1@Nkx3-2!0.81!5.48!Nkx3-2;;chr9:43013917..43013968,-!p1@Pou2f3!0.81!5.48!Pou2f3;;chrX:55283799..55283813,+!p1@Zic3!0.81!5.48!Zic3;;chr2:74513064..74513089,+!p2@Hoxd12!0.81!5.48!Hoxd12;;chr13:15555670..15555771,+!p2@Gli3!0.80!14.25!Gli3;;chr6:14851440..14851497,+!p2@Foxp2!0.80!13.81!Foxp2;;chr5:120285161..120285176,+!p2@Tbx5!0.80!5.26!Tbx5;;chr7:56892217..56892221,-!p1@Dbx1!0.80!5.26!Dbx1;;chr1:19202352..19202354,+!p2@Tfap2b!0.80!5.26!Tfap2b;;chr17:25707623..25707639,-!p1@Sox8!0.79!24.11!Sox8;;chrX:98449898..98449913,+!p2@Foxo4!0.79!17.97!Foxo4;;chr13:31717548..31717596,+!p1@Foxf2!0.79!10.74!Foxf2;;chr4:134708451..134708469,+!p1@Runx3!0.79!9.64!Runx3;;chr13:72101141..72101158,-!p3@Irx1!0.79!6.58!Irx1;;chr1:14746065..14746079,-!p1@Msc!0.79!6.36!Msc;;chr6:52163319..52163342,-!p1@Hoxa3!0.78!7.67!Hoxa3;;chr7:19608891..19608895,-!p1@Foxa3!0.78!6.80!Foxa3;;chr2:147190749..147190769,+!p1@Pax1!0.78!5.04!Pax1;;chr3:66785181..66785199,-!p2@Shox2!0.78!5.04!Shox2;;chr12:109242266..109242295,-!p1@Bcl11b!0.77!45.37!Bcl11b;;chr3:99044284..99044308,+!p4@Tbx15!0.77!4.82!Tbx15;;chr9:87625971..87625992,-!p2@Tbx18!0.77!4.82!Tbx18;;chr13:31898729..31898761,+!p1@Foxc1!0.76!12.49!Foxc1;;chr15:102087880..102087927,-!p2@Rarg!0.75!11.40!Rarg;;chr1:93698095..93698113,+!p3@Twist2!0.75!5.70!Twist2;;chr8:94881872..94881887,+!p2@Irx5!0.75!5.04!Irx5;;chr1:19199095..19199114,+!p5@Tfap2b!0.75!4.60!Tfap2b;;chr1:19199221..19199234,+!p6@Tfap2b!0.75!4.60!Tfap2b;;chr2:167363692..167363710,+!p1@Snai1!0.74!60.72!Snai1;;chr15:50720601..50720630,-!p2@Trps1!0.74!11.62!Trps1;;chr8:111227493..111227517,+!p@chr8:111227493..111227517,+!0.74!8.33!Zfhx3;;chr2:71384802..71384815,-!p1@Dlx2!0.74!5.70!Dlx2;;chr17:44951553..44951586,-!p2@Runx2!0.74!5.04!Runx2;;chr11:112643496..112643562,+!p1@Sox9!0.73!183.69!Sox9;;chr7:17647736..17647772,-!p1@Hif3a!0.73!16.88!Hif3a;;chr11:44430877..44430899,+!p6@Ebf1!0.73!5.70!Ebf1;;chr14:67853632..67853674,+!p3@Ebf2!0.73!5.48!Ebf2;;chr13:40825465..40825469,-!p2@Tfap2a!0.73!4.38!Tfap2a;;chr6:52195747..52195762,-!p3@Hoxa11!0.73!4.38!Hoxa11;;chr19:59533429..59533470,+!p4@Emx2!0.73!4.38!Emx2;;chr12:9581284..9581303,+!p2@Osr1!0.72!8.77!Osr1;;chr13:31898767..31898785,+!p4@Foxc1!0.72!5.26!Foxc1;;chr11:74981654..74981658,-!p1@Hic1!0.71!18.41!Hic1;;chr3:5218629..5218684,+!p1@Zfhx4!0.71!14.69!Zfhx4;;chr8:111227354..111227401,+!p@chr8:111227354..111227401,+!0.71!5.70!Zfhx3;;chr13:83643232..83643254,+!p5@Mef2c!0.71!4.16!Mef2c;;chr2:74529970..74529997,+!p1@Hoxd10!0.71!4.16!Hoxd10;;chr6:52184880..52184893,-!p6@Hoxa10!0.71!4.16!Hoxa10;;chr7:52471143..52471186,+!p1@Tead2!0.70!48.44!Tead2;;chr1:165243638..165243649,-!p5@Prrx1!0.70!5.04!Prrx1;;chr4:135129447..135129467,-!p2@Grhl3!0.70!5.04!Grhl3;;chr4:154010409..154010466,-!p2@Prdm16!0.69!10.08!Prdm16;;chr16:18587076..18587106,-!p1@Tbx1!0.69!5.92!Tbx1;;chr6:52190858..52190873,-!p4@Hoxa10!0.69!3.95!Hoxa10;;chr5:120285130..120285141,+!p3@Tbx5!0.69!3.95!Tbx5;;chr6:30908793..30908815,-!p1@Klf14!0.69!3.95!Klf14;;chr16:14705925..14705951,+!p1@Snai2!0.68!30.03!Snai2;;chrX:45245679..45245702,-!p1@Smarca1!0.68!19.29!Smarca1;;chr7:19679964..19679982,+!p1@Six5!0.68!12.06!Six5;;chrX:45245644..45245666,-!p2@Smarca1!0.67!13.37!Smarca1;;chr11:44430989..44431015,+!p4@Ebf1!0.67!7.01!Ebf1;;chr8:111227455..111227464,+!p@chr8:111227455..111227464,+!0.67!4.82!Zfhx3;;chr13:40826150..40826167,-!p3@Tfap2a!0.67!4.16!Tfap2a;;chr15:95485240..95485257,-!p1@Dbx2!0.67!3.73!Dbx2;;chr2:172375081..172375105,+!p1@Tfap2c!0.67!3.73!Tfap2c;;chr2:30700830..30700843,+!p4@Prrx2!0.67!3.73!Prrx2;;chr2:33496386..33496410,-!p1@Lmx1b!0.67!3.73!Lmx1b;;chr4:84320893..84320910,-!p1@Bnc2!0.66!8.77!Bnc2;;chr3:5218516..5218544,+!p2@Zfhx4!0.66!5.70!Zfhx4;;chr2:70313168..70313184,+!p1@Sp5!0.66!5.70!Sp5;;chr12:9581317..9581333,+!p3@Osr1!0.66!5.70!Osr1;;chr5:24107676..24107722,-!p4@Smarcd3!0.66!5.04!Smarcd3;;chr4:3865501..3865548,-!p1@Plag1!0.65!20.39!Plag1;;chr15:50721942..50721987,-!p13@Trps1!0.65!4.16!Trps1;;chr13:53568191..53568219,-!p2@Msx2!0.65!3.51!Msx2;;chr13:53568081..53568094,-!p3@Msx2!0.65!3.51!Msx2;;chr2:74499300..74499309,-!p@chr2:74499300..74499309,-!0.65!3.51!Evx2;;chr4:139388835..139388867,-!p1@Pax7!0.65!3.51!Pax7;;chr1:19199119..19199134,+!p4@Tfap2b!0.65!3.51!Tfap2b;;chr11:21901608..21901634,-!p1@Otx1!0.65!3.51!Otx1;;chr5:42155277..42155281,-!p2@Nkx3-2!0.65!3.51!Nkx3-2;;chr6:52176144..52176161,-!p2@Hoxa9!0.65!3.51!Hoxa9;;chrX:55284180..55284195,+!p2@Zic3!0.65!3.51!Zic3;;chr17:48061584..48061601,-!p2@Foxp4!0.64!25.21!Foxp4;;chrX:48558950..48559016,-!p1@Mbnl3!0.64!12.06!Mbnl3;;chr17:28487603..28487626,-!p2@Tead3!0.64!7.89!Tead3;;chr4:13712228..13712267,+!p3@Runx1t1!0.64!6.36!Runx1t1;;chr11:23977742..23977794,+!p6@Bcl11a!0.64!4.38!Bcl11a;;chr17:37139472..37139514,+!p1@Zfp57!0.63!26.08!Zfp57;;chr1:120949949..120950000,-!p1@Gli2!0.63!16.44!Gli2;;chr8:111227518..111227550,+!p@chr8:111227518..111227550,+!0.63!6.14!Z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chr2:172375136..172375149,+!p2@Tfap2c!0.32!1.10!Tfap2c;;chr2:168032254..168032259,-!p6@Adnp!0.32!1.10!Adnp;;chr1:19202185..19202187,+!p9@Tfap2b!0.32!1.10!Tfap2b;;chr1:122499088..122499099,+!p2@En1!0.32!1.10!En1;;chr11:23978291..23978323,+!p7@Bcl11a!0.32!1.10!Bcl11a;;chr11:44431115..44431132,+!p9@Ebf1!0.32!1.10!Ebf1;;chr10:119913301..119913302,-!p11@Hmga2!0.32!1.10!Hmga2;;chr10:126778639..126778670,-!p3@Gli1!0.32!1.10!Gli1;;chr5:77694479..77694574,+!p1@Rest!0.31!39.24!Rest;;chr12:12948633..12948651,-!p1@Mycn!0.31!17.10!Mycn;;chr7:134169762..134169795,-!p3@Maz!0.31!16.00!Maz;;chr8:107694628..107694659,+!p1@Cbfb!0.31!15.78!Cbfb;;chr19:55816770..55816793,+!p2@Tcf7l2!0.31!15.34!Tcf7l2;;chr19:26822880..26822964,+!p2@Smarca2!0.31!15.12!Smarca2;;chr1:194979315..194979359,+!p1@Irf6!0.31!10.52!Irf6;;chr17:35031460..35031518,+!p1@Zbtb12!0.31!8.77!Zbtb12;;chr11:62545367..62545412,-!p1@Zfp287!0.31!6.80!Zfp287;;chr7:25292141..25292158,+!p2@Zfp428!0.31!5.70!Zfp428;;chr4:87678709..87678726,-!p4@Mllt3!0.31!5.04!Mllt3;;chr18:84255771..84255795,-!p3@Tshz1!0.31!4.82!Tshz1;;chr4:82151148..82151159,-!p5@Nfib!0.31!4.60!Nfib;;chr13:67182439..67182491,-!p2@Zfp708!0.31!3.95!Zfp708;;chr4:154010940..154010962,-!p3@Prdm16!0.31!3.29!Prdm16;;chr9:63869729..63869749,-!p4@Smad6!0.31!2.85!Smad6;;chr1:120949925..120949947,-!p4@Gli2!0.31!2.85!Gli2;;chr7:91558631..91558652,-!p3@Arnt2!0.31!1.97!Arnt2;;chr6:52154386..52154407,-!p2@Hoxa5!0.31!1.53!Hoxa5;;chr4:55545051..55545110,-!p2@Klf4!0.31!1.53!Klf4;;chr12:25257176..25257190,+!p3@Grhl1!0.31!1.32!Grhl1;;chr19:55816300..55816332,+!p1@Tcf7l2!0.30!85.05!Tcf7l2;;chr4:154597177..154597195,-!p1@Ski!0.30!69.49!Ski;;chr7:30880169..30880211,+!p1@Zfp260!0.30!57.87!Zfp260;;chr17:28487692..28487765,-!p1@Tead3!0.30!35.07!Tead3;;chr2:160192793..160192809,-!p1@Mafb!0.30!26.96!Mafb;;chr10:79862134..79862173,-!p3@Mbd3!0.30!13.81!Mbd3;;chr5:120121020..120121049,+!p1@Tbx3!0.30!10.30!Tbx3;;chr4:62626594..62626651,+!p1@Zfp618!0.30!6.14!Zfp618;;chr4:97444261..97444272,+!p9@Nfia!0.30!3.51!Nfia;;chr6:116578939..116578952,-!p2@Zfp422!0.30!3.51!Zfp422;;chr1:170361826..170361844,-!p9@Pbx1!0.30!3.29!Pbx1;;chr16:8672256..8672279,-!p1@Carhsp1,p1@Gm9791!0.30!3.29!Carhsp1;;chr4:54960387..54960415,+!p4@Zfp462!0.30!3.07!Zfp462;;chr17:37140628..37140631,+!p2@Zfp57!0.30!2.85!Zfp57;;chr19:26681721..26681746,+!p9@Smarca2!0.30!2.85!Smarca2;;chr6:38204274..38204327,-!p3@D630045J12Rik!0.30!2.85!D630045J12Rik;;chr13:96095097..96095114,+!p5@Zbed3!0.30!2.41!Zbed3;;chr10:44178521..44178557,-!p1@Prdm1!0.30!2.41!Prdm1;;chr9:106356265..106356276,+!p4@Pcbp4!0.30!2.19!Pcbp4;;chr2:151969288..151969294,+!p1@Tcf15!0.30!1.97!Tcf15;;chr14:76904313..76904328,+!p1@Tsc22d1!0.29!341.95!Tsc22d1;;chr17:27693558..27693580,+!p1@Hmga1-rs1,p1@Hmga1!0.29!81.10!Hmga1;;chr6:48395743..48395820,-!p1@Zfp467!0.29!37.26!Zfp467;;chr17:71200529..71200556,-!p1@Tgif1!0.29!28.06!Tgif1;;chr14:65977324..65977372,+!p2@Zfp395!0.29!9.43!Zfp395;;chr7:134169741..134169760,-!p10@Maz!0.29!4.60!Maz;;chr10:114821393..114821431,-!p5@Thap2!0.29!4.16!Thap2;;chr7:148008023..148008092,-!p1@Zfp941!0.29!3.51!Zfp941;;chr8:72498246..72498263,-!p11@Gatad2a!0.29!3.29!Gatad2a;;chr8:87324292..87324303,-!p4@Nfix!0.29!3.29!Nfix;;chrX:48559079..48559108,-!p2@Mbnl3!0.29!3.29!Mbnl3;;chr13:31650026..31650045,+!p2@Foxq1!0.29!2.19!Foxq1;;chr8:72498017..72498059,-!p13@Gatad2a!0.29!2.19!Gatad2a;;chr6:146744595..146744613,+!p2@Arntl2!0.29!2.19!Arntl2;;chr6:128250521..128250543,-!p3@Tead4!0.29!1.97!Tead4;;chr17:37139455..37139469,+!p3@Zfp57!0.29!1.97!Zfp57;;chr19:7342786..7342803,+!p2@Rcor2!0.29!1.53!Rcor2;;chr4:13670441..13670463,+!p8@Runx1t1!0.29!1.32!Runx1t1;;chr13:55932591..55932622,-!p1@Pitx1!0.29!1.32!Pitx1;;chr9:63605740..63605771,-!p1@Smad3!0.28!24.55!Smad3;;chr13:44826937..44826952,+!p2@Jarid2!0.28!24.11!Jarid2;;chr6:47827642..47827707,+!p1@Zfp282!0.28!17.75!Zfp282;;chr9:113840108..113840184,+!p2@Ubp1!0.28!15.34!Ubp1;;chr5:39075982..39076052,-!p1@Zfp518b!0.28!11.84!Zfp518b;;chr4:118967125..118967143,-!p2@Ybx1!0.28!10.30!Ybx1;;chr12:75008946..75008957,+!p2@Hif1a!0.28!8.11!Hif1a;;chr17:48061605..48061629,-!p6@Foxp4!0.28!6.36!Foxp4;;chr15:75799717..75799742,+!p1@Zfp707!0.28!6.14!Zfp707;;chr7:30836380..30836430,-!p1@Zfp14!0.28!5.92!Zfp14;;chr15:57526469..57526534,+!p1@Zhx2!0.28!5.48!Zhx2;;chr9:39999893..39999922,+!p1@Zfp202!0.28!5.26!Zfp202;;chr7:35841581..35841605,-!p2@Cebpg!0.28!3.73!Cebpg;;chr6:115803317..115803361,-!p2@Mbd4!0.28!3.51!Mbd4;;chr5:65213356..65213412,+!p6@Klf3!0.28!2.85!Klf3;;chr17:32506357..32506377,-!p3@Wiz!0.28!2.85!Wiz;;chr17:27693746..27693759,+!p6@Hmga1-rs1,p7@Hmga1!0.28!2.63!Hmga1;;chrX:70587989..70588000,+!p3@Zfp275!0.28!2.63!Zfp275;;chr9:106356278..106356292,+!p3@Pcbp4!0.28!2.19!Pcbp4;;chr6:88143711..88143717,+!p2@Gata2!0.28!1.97!Gata2;;chr7:123177120..123177138,-!p10@Sox6!0.28!1.32!Sox6;;chr17:32967140..32967197,-!p1@Zfp799!0.27!22.58!Zfp799;;chr8:109620410..109620462,-!p1@Terf2!0.27!15.56!Terf2;;chr8:112229478..112229536,+!p1@Zfp821!0.27!14.03!Zfp821;;chr14:65977498..659775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| ||
|ffid_belonging_in_development=UBERON:0002532,UBERON:0006603,UBERON:0005417,UBERON:0005733,UBERON:0005732,UBERON:0005729,UBERON:0010316,FF:0000294 | |||
|fonse_cell_line= | |fonse_cell_line= | ||
|fonse_cell_line_closure= | |fonse_cell_line_closure= | ||
Line 36: | Line 42: | ||
|has_quality= | |has_quality= | ||
|id=FF:413-26A8 | |id=FF:413-26A8 | ||
|is_a=EFO:0002091;;FF: | |is_a=EFO:0002091;;FF:0011342 | ||
|is_obsolete= | |||
|library_id=CNhs10577 | |||
|library_id_phase_based=2:CNhs10577 | |||
|microRNAs= | |||
|microRNAs_nn= | |||
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/mouse#cage;sample;413 | |||
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/mouse#cage;sample;413 | |||
|mm10bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/mm10_v2/basic/mouse.tissue.hCAGE/forelimb%252c%2520embryo%2520E14.CNhs10577.413-26A8.mm10.nobarcode.bam | |||
|mm10ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/mm10_v2/basic/mouse.tissue.hCAGE/forelimb%252c%2520embryo%2520E14.CNhs10577.413-26A8.mm10.nobarcode.ctss.bed.gz | |||
|mm9bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/mouse.tissue.hCAGE/forelimb%252c%2520embryo%2520E14.CNhs10577.413-26A8.mm9.nobarcode.bam | |||
|mm9ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/mouse.tissue.hCAGE/forelimb%252c%2520embryo%2520E14.CNhs10577.413-26A8.mm9.ctss.bed.gz | |||
|mm9fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/mouse.tissue.hCAGE/forelimb%252c%2520embryo%2520E14.CNhs10577.413-26A8.mm9.nobarcode.rdna.fa.gz | |||
|name=forelimb, embryo E14 | |name=forelimb, embryo E14 | ||
|namespace=FANTOM5 | |namespace=FANTOM5 | ||
Line 42: | Line 60: | ||
|profile_cagescan=,,, | |profile_cagescan=,,, | ||
|profile_hcage=CNhs10577,LSID653,release008,COMPLETED | |profile_hcage=CNhs10577,LSID653,release008,COMPLETED | ||
|profile_rnaseq= | |profile_rnaseq= | ||
|profile_srnaseq=,,, | |profile_srnaseq=,,, | ||
|repeat_enrich_byfamily=-0.074758879425622,0,0,0,0,0,-0.046733438096705,0,0,0,0,0.646758925983398,0,0,0,0,0,0,-0.191893350882575,0,0,0,0,0,0.0860734338295156,0,0,0,0,0,0,0.0430367169147578,-0.11852732398507,0,0,0,0,0,0.0101536582190847,0.0193797264334572,0.000974241535991904,0.610835482805632,0.0515182190403889,0,0,0,0,0,0,0,0,0,0,0,0,-0.0660055475634404,0.157877097374896,0,0,0,0.115030142292021,0,-0.0209583735933314,0,0,0,0.0605420303870589,0.129244810999575,0.0613853409438282,0.0229421507790771,0,0.0417885722229298,0.0122397884496523,0.000533810078872987,0.0860734338295156,0,0,-0.14783611576212,-0.0105055339530752,-0.0788315948399074,0,0,0,0,0,0,-0.0927377001344191,-0.249706019137554,-0.133095979900642,0,0,0,0,0 | |||
|rna_box=26 | |rna_box=26 | ||
|rna_catalog_number= | |rna_catalog_number= | ||
Line 57: | Line 76: | ||
|rna_weight_ug= | |rna_weight_ug= | ||
|sample_age= | |sample_age= | ||
|sample_category=developmental | |||
|sample_cell_catalog= | |sample_cell_catalog= | ||
|sample_cell_line= | |sample_cell_line= | ||
Line 76: | Line 96: | ||
|sample_tissue=forelimb | |sample_tissue=forelimb | ||
|top_motifs=ZNF238:2.14080746963;ZNF384:1.62564447556;NANOG{mouse}:1.51330070519;SOX5:1.47267621688;CDC5L:1.39324124175;RREB1:1.37186509596;NKX2-3_NKX2-5:1.34581799947;MYBL2:1.332523418;HIF1A:1.3108880898;IKZF1:1.310211311;ATF6:1.29753939947;PATZ1:1.27618643872;TFCP2:1.25847982627;GFI1:1.18813992288;ZNF143:1.18767573527;TFAP2{A,C}:1.17966151804;NKX2-1,4:1.13527312889;HMGA1,2:1.12385449596;CDX1,2,4:1.11075394739;LEF1_TCF7_TCF7L1,2:1.08402054189;MAZ:1.06684715905;NFATC1..3:1.0461413341;TOPORS:1.04275029301;KLF4:1.02972971058;XCPE1{core}:1.00950563088;HES1:1.002959522;TEAD1:0.969752947093;PAX6:0.961798106954;SOX2:0.960761750984;STAT5{A,B}:0.950402545639;FOXP3:0.946256813391;EP300:0.933873854258;GFI1B:0.919237052687;TFAP4:0.905114945173;GATA4:0.899254135694;FOXL1:0.898122613752;SPZ1:0.896075231603;E2F1..5:0.868487325826;RXR{A,B,G}:0.843128088633;GCM1,2:0.834422810925;MZF1:0.832773028586;GLI1..3:0.805524768122;EN1,2:0.784085472584;VSX1,2:0.745426238181;NFY{A,B,C}:0.739701700237;IKZF2:0.737925998244;TAL1_TCF{3,4,12}:0.730061259513;ESR1:0.726999321243;PAX5:0.715449933072;HMX1:0.705536223969;GTF2I:0.704336906551;HIC1:0.698640060025;SOX{8,9,10}:0.694251300827;PDX1:0.68659525197;UFEwm:0.667023131713;TGIF1:0.663594764327;HOXA9_MEIS1:0.646490199947;SOX17:0.632064816541;NKX3-1:0.629189860244;NRF1:0.581457615642;ZNF148:0.579699773856;HOX{A4,D4}:0.564068827074;MTE{core}:0.543434653969;PAX1,9:0.516124834648;GTF2A1,2:0.507270477438;ATF2:0.500356056544;MTF1:0.48108548684;HSF1,2:0.478793167153;MEF2{A,B,C,D}:0.470297610453;PRDM1:0.449653257268;TLX1..3_NFIC{dimer}:0.429828954685;ALX4:0.407571672696;BREu{core}:0.395859879001;NANOG:0.386585181483;NHLH1,2:0.37606054809;SMAD1..7,9:0.373997958047;HBP1_HMGB_SSRP1_UBTF:0.370550592529;MED-1{core}:0.360522149691;TFDP1:0.348391536643;TFAP2B:0.346461593942;TBP:0.342737160219;FOXD3:0.336292438184;POU5F1:0.336084741273;SRF:0.316236133858;T:0.294819557242;EGR1..3:0.29157991345;SP1:0.262714550619;TP53:0.217971710736;ELK1,4_GABP{A,B1}:0.178686698637;PRRX1,2:0.173254771051;DBP:0.17187993913;STAT1,3:0.169085379378;ZIC1..3:0.154197675462;PITX1..3:0.153396032228;RBPJ:0.142174289652;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.139221228389;TLX2:0.127372090063;HOX{A5,B5}:0.125872661173;TEF:0.111639178912;ZNF423:0.102871598904;ZFP161:0.075781201665;NFE2L1:0.0574274039364;LHX3,4:0.0452880469443;TBX4,5:0.040490114076;NKX3-2:0.0165622737793;POU3F1..4:0.0156958011164;SPIB:0.00485860060279;POU2F1..3:0.00348935549367;ELF1,2,4:0.00338548120666;MYFfamily:0.00121930001118;FOXP1:-0.000441624758045;GZF1:-0.0195699770256;MYOD1:-0.0455304765189;ZBTB6:-0.056715594291;PAX4:-0.0593215196496;FOSL2:-0.0616072862762;MYB:-0.0662352606793;REST:-0.101300625749;DMAP1_NCOR{1,2}_SMARC:-0.102667011349;NKX6-1,2:-0.114670342578;FOS_FOS{B,L1}_JUN{B,D}:-0.120649109221;MAFB:-0.125282050459;NFKB1_REL_RELA:-0.125768486041;NR6A1:-0.128787380917;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.165019840436;CUX2:-0.167550904308;ALX1:-0.168470186104;RUNX1..3:-0.170727749113;RFX1:-0.175547796299;AHR_ARNT_ARNT2:-0.198365042027;HAND1,2:-0.211172265851;RXRA_VDR{dimer}:-0.220831210386;EVI1:-0.234412718817;SNAI1..3:-0.24157327859;SPI1:-0.253094120026;ADNP_IRX_SIX_ZHX:-0.279539625683;HLF:-0.283588163212;FOXA2:-0.302549382116;AIRE:-0.329315973663;RFX2..5_RFXANK_RFXAP:-0.346317553252;ZEB1:-0.347596874428;ARID5B:-0.371576836227;JUN:-0.375707895116;SREBF1,2:-0.386325730085;POU6F1:-0.39576110536;ETS1,2:-0.397169161536;YY1:-0.402390923355;ZBTB16:-0.407039838573;NKX2-2,8:-0.414282446402;PBX1:-0.42046450977;PAX8:-0.440826831089;RORA:-0.462454150807;FOXN1:-0.465726372269;ONECUT1,2:-0.473314174927;BACH2:-0.476063823848;ATF4:-0.50781583691;CRX:-0.517736199691;PAX2:-0.519154523949;IRF7:-0.521582356271;POU1F1:-0.525177130081;ATF5_CREB3:-0.541500694246;HNF4A_NR2F1,2:-0.544287081271;OCT4_SOX2{dimer}:-0.551687345082;FOXO1,3,4:-0.628146320157;PPARG:-0.640271360995;EBF1:-0.645574161198;FOX{I1,J2}:-0.651249936498;HNF1A:-0.657264855234;BPTF:-0.729094655387;AR:-0.748293249827;LMO2:-0.76499999232;CREB1:-0.78689220377;bHLH_family:-0.845787836993;IRF1,2:-0.850680097488;NFIX:-0.852947953044;GATA6:-0.879361692296;NR3C1:-0.929595498285;FOX{F1,F2,J1}:-0.940414080756;FOXM1:-0.942730243422;NFE2L2:-0.973209147165;NFE2:-1.02580409011;NR5A1,2:-1.04490490152;CEBPA,B_DDIT3:-1.08566365722;NR1H4:-1.08671786922;FOXQ1:-1.12205765081;STAT2,4,6:-1.12228820853;NFIL3:-1.26224107521;ESRRA:-1.36261903642;FOX{D1,D2}:-1.42146375644 | |top_motifs=ZNF238:2.14080746963;ZNF384:1.62564447556;NANOG{mouse}:1.51330070519;SOX5:1.47267621688;CDC5L:1.39324124175;RREB1:1.37186509596;NKX2-3_NKX2-5:1.34581799947;MYBL2:1.332523418;HIF1A:1.3108880898;IKZF1:1.310211311;ATF6:1.29753939947;PATZ1:1.27618643872;TFCP2:1.25847982627;GFI1:1.18813992288;ZNF143:1.18767573527;TFAP2{A,C}:1.17966151804;NKX2-1,4:1.13527312889;HMGA1,2:1.12385449596;CDX1,2,4:1.11075394739;LEF1_TCF7_TCF7L1,2:1.08402054189;MAZ:1.06684715905;NFATC1..3:1.0461413341;TOPORS:1.04275029301;KLF4:1.02972971058;XCPE1{core}:1.00950563088;HES1:1.002959522;TEAD1:0.969752947093;PAX6:0.961798106954;SOX2:0.960761750984;STAT5{A,B}:0.950402545639;FOXP3:0.946256813391;EP300:0.933873854258;GFI1B:0.919237052687;TFAP4:0.905114945173;GATA4:0.899254135694;FOXL1:0.898122613752;SPZ1:0.896075231603;E2F1..5:0.868487325826;RXR{A,B,G}:0.843128088633;GCM1,2:0.834422810925;MZF1:0.832773028586;GLI1..3:0.805524768122;EN1,2:0.784085472584;VSX1,2:0.745426238181;NFY{A,B,C}:0.739701700237;IKZF2:0.737925998244;TAL1_TCF{3,4,12}:0.730061259513;ESR1:0.726999321243;PAX5:0.715449933072;HMX1:0.705536223969;GTF2I:0.704336906551;HIC1:0.698640060025;SOX{8,9,10}:0.694251300827;PDX1:0.68659525197;UFEwm:0.667023131713;TGIF1:0.663594764327;HOXA9_MEIS1:0.646490199947;SOX17:0.632064816541;NKX3-1:0.629189860244;NRF1:0.581457615642;ZNF148:0.579699773856;HOX{A4,D4}:0.564068827074;MTE{core}:0.543434653969;PAX1,9:0.516124834648;GTF2A1,2:0.507270477438;ATF2:0.500356056544;MTF1:0.48108548684;HSF1,2:0.478793167153;MEF2{A,B,C,D}:0.470297610453;PRDM1:0.449653257268;TLX1..3_NFIC{dimer}:0.429828954685;ALX4:0.407571672696;BREu{core}:0.395859879001;NANOG:0.386585181483;NHLH1,2:0.37606054809;SMAD1..7,9:0.373997958047;HBP1_HMGB_SSRP1_UBTF:0.370550592529;MED-1{core}:0.360522149691;TFDP1:0.348391536643;TFAP2B:0.346461593942;TBP:0.342737160219;FOXD3:0.336292438184;POU5F1:0.336084741273;SRF:0.316236133858;T:0.294819557242;EGR1..3:0.29157991345;SP1:0.262714550619;TP53:0.217971710736;ELK1,4_GABP{A,B1}:0.178686698637;PRRX1,2:0.173254771051;DBP:0.17187993913;STAT1,3:0.169085379378;ZIC1..3:0.154197675462;PITX1..3:0.153396032228;RBPJ:0.142174289652;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.139221228389;TLX2:0.127372090063;HOX{A5,B5}:0.125872661173;TEF:0.111639178912;ZNF423:0.102871598904;ZFP161:0.075781201665;NFE2L1:0.0574274039364;LHX3,4:0.0452880469443;TBX4,5:0.040490114076;NKX3-2:0.0165622737793;POU3F1..4:0.0156958011164;SPIB:0.00485860060279;POU2F1..3:0.00348935549367;ELF1,2,4:0.00338548120666;MYFfamily:0.00121930001118;FOXP1:-0.000441624758045;GZF1:-0.0195699770256;MYOD1:-0.0455304765189;ZBTB6:-0.056715594291;PAX4:-0.0593215196496;FOSL2:-0.0616072862762;MYB:-0.0662352606793;REST:-0.101300625749;DMAP1_NCOR{1,2}_SMARC:-0.102667011349;NKX6-1,2:-0.114670342578;FOS_FOS{B,L1}_JUN{B,D}:-0.120649109221;MAFB:-0.125282050459;NFKB1_REL_RELA:-0.125768486041;NR6A1:-0.128787380917;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.165019840436;CUX2:-0.167550904308;ALX1:-0.168470186104;RUNX1..3:-0.170727749113;RFX1:-0.175547796299;AHR_ARNT_ARNT2:-0.198365042027;HAND1,2:-0.211172265851;RXRA_VDR{dimer}:-0.220831210386;EVI1:-0.234412718817;SNAI1..3:-0.24157327859;SPI1:-0.253094120026;ADNP_IRX_SIX_ZHX:-0.279539625683;HLF:-0.283588163212;FOXA2:-0.302549382116;AIRE:-0.329315973663;RFX2..5_RFXANK_RFXAP:-0.346317553252;ZEB1:-0.347596874428;ARID5B:-0.371576836227;JUN:-0.375707895116;SREBF1,2:-0.386325730085;POU6F1:-0.39576110536;ETS1,2:-0.397169161536;YY1:-0.402390923355;ZBTB16:-0.407039838573;NKX2-2,8:-0.414282446402;PBX1:-0.42046450977;PAX8:-0.440826831089;RORA:-0.462454150807;FOXN1:-0.465726372269;ONECUT1,2:-0.473314174927;BACH2:-0.476063823848;ATF4:-0.50781583691;CRX:-0.517736199691;PAX2:-0.519154523949;IRF7:-0.521582356271;POU1F1:-0.525177130081;ATF5_CREB3:-0.541500694246;HNF4A_NR2F1,2:-0.544287081271;OCT4_SOX2{dimer}:-0.551687345082;FOXO1,3,4:-0.628146320157;PPARG:-0.640271360995;EBF1:-0.645574161198;FOX{I1,J2}:-0.651249936498;HNF1A:-0.657264855234;BPTF:-0.729094655387;AR:-0.748293249827;LMO2:-0.76499999232;CREB1:-0.78689220377;bHLH_family:-0.845787836993;IRF1,2:-0.850680097488;NFIX:-0.852947953044;GATA6:-0.879361692296;NR3C1:-0.929595498285;FOX{F1,F2,J1}:-0.940414080756;FOXM1:-0.942730243422;NFE2L2:-0.973209147165;NFE2:-1.02580409011;NR5A1,2:-1.04490490152;CEBPA,B_DDIT3:-1.08566365722;NR1H4:-1.08671786922;FOXQ1:-1.12205765081;STAT2,4,6:-1.12228820853;NFIL3:-1.26224107521;ESRRA:-1.36261903642;FOX{D1,D2}:-1.42146375644 | ||
|xref= | |||
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_mouse;search_select_hide=table111:413-26A8;search_select_hide=table117:413-26A8 | |||
}} | }} |
Latest revision as of 19:16, 4 June 2020
Name: | forelimb, embryo E14 |
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Species: | Mouse (Mus musculus) |
Library ID: | CNhs10577 |
Sample type: | developmental |
Genomic View: | UCSC |
CAGEd-oPOSSUM: | link |
ZENBU report : | link |
Additional information | ||||||||||||||||||||||||||||
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Sample information
RNA information
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CAGE Accession numbers | ||||||||||||||||||||||||||||||||||||||||||||||
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Download raw sequence, BAM & CTSS | ||||||||||||||
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Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
CNhs10577
0 | 0 |
1 | 0 |
10 | 0 |
100 | 0 |
1000 | 0 |
1001 | -0.0275 |
1002 | 0.1 |
1003 | 0.208 |
1004 | 0 |
1005 | 0 |
1006 | -0.0589 |
1007 | 0.0577 |
1008 | 0 |
1009 | -0.00941 |
101 | 0.0717 |
1010 | 0 |
1011 | 0 |
1012 | 0 |
1013 | -0.126 |
1014 | 0.319 |
1015 | 0.3 |
1016 | 0.386 |
1017 | 0 |
1018 | 0.321 |
1019 | 0 |
102 | 0 |
1020 | 0 |
1021 | 0.158 |
1022 | 0 |
1023 | 0 |
1024 | -0.0337 |
1025 | 0 |
1026 | 0.0566 |
1027 | 0.0374 |
1028 | 0 |
1029 | -0.0899 |
103 | 0.321 |
1030 | 0 |
1031 | 0.357 |
1032 | -0.0243 |
1033 | 0.0109 |
1034 | 0 |
1035 | 0 |
1036 | 0.14 |
1037 | 0 |
1038 | -0.00817 |
1039 | -0.129 |
104 | 0 |
1040 | 0.101 |
1041 | 0 |
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs10577
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs10577
Novel motif | Logo | P-value |
---|---|---|
1 | 1 | 0.0375 |
10 | 10 | 0.208 |
100 | 100 | 0.834 |
101 | 101 | 0.68 |
102 | 102 | 0.584 |
103 | 103 | 0.0189 |
104 | 104 | 0.55 |
105 | 105 | 0.765 |
106 | 106 | 0.0311 |
107 | 107 | 0.2 |
108 | 108 | 0.77 |
109 | 109 | 0.275 |
11 | 11 | 0.206 |
110 | 110 | 0.282 |
111 | 111 | 0.00935 |
112 | 112 | 0.0157 |
113 | 113 | 0.485 |
114 | 114 | 0.00765 |
115 | 115 | 0.722 |
116 | 116 | 0.922 |
117 | 117 | 0.284 |
118 | 118 | 0.358 |
119 | 119 | 0.0295 |
12 | 12 | 0.551 |
120 | 120 | 0.759 |
121 | 121 | 0.466 |
122 | 122 | 0.863 |
123 | 123 | 0.108 |
124 | 124 | 0.232 |
125 | 125 | 0.141 |
126 | 126 | 0.232 |
127 | 127 | 0.0639 |
128 | 128 | 0.0674 |
129 | 129 | 0.0899 |
13 | 13 | 0.796 |
130 | 130 | 0.189 |
131 | 131 | 0.919 |
132 | 132 | 0.502 |
133 | 133 | 0.71 |
134 | 134 | 0.769 |
135 | 135 | 0.736 |
136 | 136 | 0.55 |
137 | 137 | 0.766 |
138 | 138 | 0.688 |
139 | 139 | 0.00175 |
14 | 14 | 0.275 |
140 | 140 | 0.105 |
141 | 141 | 0.388 |
142 | 142 | 0.81 |
143 | 143 | 0.584 |
144 | 144 | 0.531 |
145 | 145 | 0.308 |
146 | 146 | 0.426 |
147 | 147 | 0.334 |
148 | 148 | 0.16 |
149 | 149 | 0.511 |
15 | 15 | 0.0534 |
150 | 150 | 0.702 |
151 | 151 | 0.0112 |
152 | 152 | 0.48 |
153 | 153 | 0.142 |
154 | 154 | 0.647 |
155 | 155 | 0.784 |
156 | 156 | 4.74515e-4 |
157 | 157 | 0.173 |
158 | 158 | 0.16 |
159 | 159 | 0.0592 |
160 | 160 | 0.921 |
161 | 161 | 0.288 |
162 | 162 | 0.822 |
163 | 163 | 0.0431 |
164 | 164 | 0.25 |
165 | 165 | 0.18 |
166 | 166 | 0.157 |
167 | 167 | 0.313 |
168 | 168 | 0.728 |
169 | 169 | 0.183 |
17 | 17 | 0.171 |
18 | 18 | 0.222 |
19 | 19 | 0.267 |
2 | 2 | 0.645 |
20 | 20 | 0.902 |
21 | 21 | 0.802 |
22 | 22 | 0.64 |
23 | 23 | 0.217 |
24 | 24 | 0.79 |
25 | 25 | 0.232 |
26 | 26 | 0.664 |
27 | 27 | 0.513 |
28 | 28 | 0.192 |
29 | 29 | 0.286 |
3 | 3 | 0.158 |
30 | 30 | 0.669 |
31 | 31 | 0.379 |
32 | 32 | 0.412 |
33 | 33 | 0.632 |
34 | 34 | 0.966 |
35 | 35 | 0.0313 |
36 | 36 | 0.165 |
37 | 37 | 0.189 |
38 | 38 | 0.345 |
39 | 39 | 0.796 |
4 | 4 | 0.49 |
40 | 40 | 0.321 |
41 | 41 | 0.507 |
42 | 42 | 0.398 |
43 | 43 | 0.114 |
44 | 44 | 0.0628 |
45 | 45 | 0.846 |
46 | 46 | 0.292 |
47 | 47 | 0.122 |
48 | 48 | 0.13 |
49 | 49 | 0.062 |
5 | 5 | 0.118 |
50 | 50 | 0.501 |
51 | 51 | 0.6 |
52 | 52 | 0.438 |
53 | 53 | 0.751 |
54 | 54 | 0.397 |
55 | 55 | 0.824 |
56 | 56 | 0.389 |
57 | 57 | 0.463 |
58 | 58 | 0.217 |
59 | 59 | 0.433 |
6 | 6 | 0.471 |
60 | 60 | 0.19 |
61 | 61 | 0.451 |
62 | 62 | 0.0588 |
63 | 63 | 0.354 |
64 | 64 | 0.408 |
65 | 65 | 0.229 |
66 | 66 | 0.491 |
67 | 67 | 0.731 |
68 | 68 | 0.00457 |
69 | 69 | 0.47 |
7 | 7 | 0.261 |
70 | 70 | 0.00304 |
71 | 71 | 0.251 |
72 | 72 | 0.465 |
73 | 73 | 0.554 |
74 | 74 | 0.413 |
75 | 75 | 0.0782 |
76 | 76 | 0.892 |
77 | 77 | 0.272 |
78 | 78 | 0.569 |
79 | 79 | 0.764 |
8 | 8 | 0.0966 |
80 | 80 | 0.0639 |
81 | 81 | 0.435 |
82 | 82 | 0.113 |
83 | 83 | 0.492 |
84 | 84 | 0.54 |
85 | 85 | 0.019 |
86 | 86 | 0.758 |
87 | 87 | 0.625 |
88 | 88 | 0.891 |
89 | 89 | 0.511 |
9 | 9 | 0.834 |
90 | 90 | 0.028 |
91 | 91 | 0.652 |
92 | 92 | 0.114 |
93 | 93 | 0.364 |
94 | 94 | 0.677 |
95 | 95 | 0.335 |
96 | 96 | 0.243 |
97 | 97 | 0.701 |
98 | 98 | 0.208 |
99 | 99 | 0.95 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs10577
FANTOM5 (FF) ontology
Direct parent terms
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
UBERON: Anatomy
0000468 (multi-cellular organism)
0000922 (embryo)
0002102 (forelimb)
0000479 (tissue)
0000026 (appendage)
0000475 (organism subdivision)
0004120 (mesoderm-derived structure)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0001062 (anatomical entity)
0004708 (paired limb/fin)
0002101 (limb)
0004710 (pectoral appendage)
0010317 (germ layer / neural crest derived structure)
0010707 (appendage girdle complex)
0000153 (anterior region of body)
0010708 (pectoral complex)
FF: FANTOM5
0000102 (sample by type)
0000101 (sample by species)
0000103 (mouse sample)
0000001 (sample)
0000999 (fetal tissue sample)
0000292 (embryonic day sample - mouse)
0000004 (tissue sample)
0000296 (mouse embryonic day 14 sample)
0011342 (mouse forelimb- embryo E14 sample)
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
UBERON:0002532 (epiblast (generic))
UBERON:0006603 (presumptive mesoderm)
UBERON:0005417 (forelimb bud)
UBERON:0005733 (limb field)
UBERON:0005732 (limb/fin field)
UBERON:0005729 (forelimb/pectoral fin field)
UBERON:0010316 (germ layer / neural crest)
FF:0000294 (mouse embryonic day 11 sample)