FF:464-22A5: Difference between revisions

Latest revision as of 19:17, 4 June 2020

Name:	kidney, embryo E16
Species:	Mouse (Mus musculus)
Library ID:	CNhs10584
Sample type:	developmental
Genomic View:	UCSC
CAGEd-oPOSSUM:	link
ZENBU report :	link

Additional information

Sample information

strain	C57BL/6J
tissue	kidney
dev stage	16 days embryo
sex	mixture
age	NA
cell type	CELL MIXTURE - tissue sample
cell line	NA
company	NA
collaboration	FANTOM5 OSC CORE (contact: Al Forrest)
External link for information	[{{{sample_info_link}}} {{{sample_info_link}}}]

RNA information

lot number	NA
catalog number	NA
sample type	NA
extraction protocol (Details)	NA

CAGE Accession numbers

Method		Sample accession id
CAGE		SAMD00005783

Library accession numbers

Library id		Method		Exp. accession id		Run accession id
CNhs10584		CAGE		DRX009006		DRR009880

Accession ID Mm9

Library id		BAM		CTSS
CNhs10584		DRZ001305		DRZ002688

Accession ID Mm10

Library id		BAM		CTSS
CNhs10584		DRZ012655		DRZ014038

Download raw sequence, BAM & CTSS

Mm9

Fasta	BAM	CTSS
download	download	donwload

Mm10

BAM	CTSS
download	donwload

Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.

Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. Analyst:NA link to dataset. data

CNhs10584

0	0
1	0
10	0
100	0
1000	-0.0355
1001	-0.0631
1002	0.0614
1003	-0.123
1004	0
1005	-0.201
1006	-0.143
1007	0.137
1008	0
1009	0.0681
101	0.0864
1010	0
1011	-0.00937
1012	0
1013	-0.0717
1014	0
1015	0.21
1016	0.111
1017	0
1018	0
1019	0
102	0
1020	0
1021	0
1022	-0.0704
1023	0
1024	0
1025	0
1026	0.0674
1027	-0.048
1028	0
1029	-0.148
103	0
1030	0
1031	0.338
1032	0.086
1033	-0.0665
1034	0
1035	0
1036	0.042
1037	0
1038	-0.0289
1039	-0.129
104	0
1040	0.166
1041	0

Repeat families with enriched expression in this sampleSummary:Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed. Analyst:NA link to dataset. data

TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifsSummary:Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression Analyst: Michiel de Hoon link to dataset. data

library id: CNhs10584

Jaspar motif	Logo	P-value
MA0002.2	MA0002.2	0.0369
MA0003.1	MA0003.1	0.6
MA0004.1	MA0004.1	0.535
MA0006.1	MA0006.1	0.793
MA0007.1	MA0007.1	0.862
MA0009.1	MA0009.1	0.344
MA0014.1	MA0014.1	0.147
MA0017.1	MA0017.1	0.851
MA0018.2	MA0018.2	0.0736
MA0019.1	MA0019.1	0.451
MA0024.1	MA0024.1	6.63102e-7
MA0025.1	MA0025.1	0.0386
MA0027.1	MA0027.1	0.829
MA0028.1	MA0028.1	0.935
MA0029.1	MA0029.1	0.21
MA0030.1	MA0030.1	0.599
MA0031.1	MA0031.1	0.838
MA0035.2	MA0035.2	7.80504e-4
MA0038.1	MA0038.1	0.041
MA0039.2	MA0039.2	0.908
MA0040.1	MA0040.1	0.796
MA0041.1	MA0041.1	0.204
MA0042.1	MA0042.1	0.611
MA0043.1	MA0043.1	0.204
MA0046.1	MA0046.1	1.82509e-56
MA0047.2	MA0047.2	0.412
MA0048.1	MA0048.1	0.0837
MA0050.1	MA0050.1	1.15639e-6
MA0051.1	MA0051.1	6.03886e-4
MA0052.1	MA0052.1	3.7009e-5
MA0055.1	MA0055.1	0.0387
MA0057.1	MA0057.1	0.494
MA0058.1	MA0058.1	0.494
MA0059.1	MA0059.1	0.358
MA0060.1	MA0060.1	8.07892e-9
MA0061.1	MA0061.1	0.687
MA0062.2	MA0062.2	0.123
MA0065.2	MA0065.2	0.0894
MA0066.1	MA0066.1	0.136
MA0067.1	MA0067.1	0.24
MA0068.1	MA0068.1	0.946
MA0069.1	MA0069.1	0.206
MA0070.1	MA0070.1	0.779
MA0071.1	MA0071.1	0.144
MA0072.1	MA0072.1	0.145
MA0073.1	MA0073.1	0.905
MA0074.1	MA0074.1	0.979
MA0076.1	MA0076.1	0.858
MA0077.1	MA0077.1	0.301
MA0078.1	MA0078.1	0.918
MA0079.2	MA0079.2	0.967
MA0080.2	MA0080.2	0.00189
MA0081.1	MA0081.1	0.364
MA0083.1	MA0083.1	0.98
MA0084.1	MA0084.1	0.174
MA0087.1	MA0087.1	0.847
MA0088.1	MA0088.1	0.846
MA0090.1	MA0090.1	0.328
MA0091.1	MA0091.1	0.29
MA0092.1	MA0092.1	0.734
MA0093.1	MA0093.1	0.508
MA0099.2	MA0099.2	0.0253
MA0100.1	MA0100.1	0.515
MA0101.1	MA0101.1	0.392
MA0102.2	MA0102.2	0.0864
MA0103.1	MA0103.1	0.302
MA0104.2	MA0104.2	0.0656
MA0105.1	MA0105.1	0.343
MA0106.1	MA0106.1	0.139
MA0107.1	MA0107.1	0.59
MA0108.2	MA0108.2	0.0747
MA0111.1	MA0111.1	0.646
MA0112.2	MA0112.2	0.00959
MA0113.1	MA0113.1	0.296
MA0114.1	MA0114.1	0.81
MA0115.1	MA0115.1	0.369
MA0116.1	MA0116.1	0.00773
MA0117.1	MA0117.1	0.0213
MA0119.1	MA0119.1	0.0745
MA0122.1	MA0122.1	0.734
MA0124.1	MA0124.1	0.992
MA0125.1	MA0125.1	0.842
MA0131.1	MA0131.1	0.691
MA0135.1	MA0135.1	0.361
MA0136.1	MA0136.1	0.00333
MA0137.2	MA0137.2	0.339
MA0138.2	MA0138.2	0.00849
MA0139.1	MA0139.1	0.279
MA0140.1	MA0140.1	0.0357
MA0141.1	MA0141.1	0.175
MA0142.1	MA0142.1	0.219
MA0143.1	MA0143.1	0.13
MA0144.1	MA0144.1	0.717
MA0145.1	MA0145.1	0.546
MA0146.1	MA0146.1	0.34
MA0147.1	MA0147.1	0.0869
MA0148.1	MA0148.1	0.573
MA0149.1	MA0149.1	0.0373
MA0150.1	MA0150.1	0.0217
MA0152.1	MA0152.1	0.0855
MA0153.1	MA0153.1	7.76624e-34
MA0154.1	MA0154.1	0.11
MA0155.1	MA0155.1	0.12
MA0156.1	MA0156.1	0.107
MA0157.1	MA0157.1	0.513
MA0159.1	MA0159.1	0.0413
MA0160.1	MA0160.1	0.336
MA0162.1	MA0162.1	0.359
MA0163.1	MA0163.1	0.0753
MA0164.1	MA0164.1	0.938
MA0258.1	MA0258.1	0.00883
MA0259.1	MA0259.1	0.606

FANTOM5 phase1 novel unique motifsSummary:Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above Analyst: Michiel de Hoon link to dataset. data

library id: CNhs10584

Novel motif	Logo	P-value
1	1	0.00482
10	10	0.638
100	100	0.714
101	101	0.996
102	102	0.545
103	103	0.108
104	104	0.62
105	105	0.893
106	106	0.4
107	107	0.882
108	108	0.936
109	109	0.121
11	11	0.0993
110	110	0.523
111	111	0.00766
112	112	0.483
113	113	0.986
114	114	0.00649
115	115	0.0727
116	116	0.32
117	117	0.0546
118	118	0.0496
119	119	0.441
12	12	0.972
120	120	0.201
121	121	0.858
122	122	0.629
123	123	0.0175
124	124	0.935
125	125	0.236
126	126	0.997
127	127	0.288
128	128	0.117
129	129	0.531
13	13	0.84
130	130	0.351
131	131	0.234
132	132	0.74
133	133	0.649
134	134	0.227
135	135	0.862
136	136	0.0897
137	137	0.295
138	138	0.186
139	139	0.00677
14	14	0.684
140	140	0.48
141	141	0.889
142	142	0.153
143	143	0.536
144	144	0.24
145	145	0.912
146	146	0.95
147	147	0.774
148	148	0.597
149	149	0.484
15	15	0.0912
150	150	0.185
151	151	0.101
152	152	0.973
153	153	0.845
154	154	0.611
155	155	0.943
156	156	0.107
157	157	0.877
158	158	0.997
159	159	0.873
160	160	0.532
161	161	0.21
162	162	0.756
163	163	0.0793
164	164	0.424
165	165	0.808
166	166	0.49
167	167	0.133
168	168	0.329
169	169	0.988
17	17	0.531
18	18	0.108
19	19	0.571
2	2	0.659
20	20	0.942
21	21	0.554
22	22	0.792
23	23	0.0998
24	24	0.704
25	25	0.347
26	26	0.547
27	27	0.817
28	28	0.111
29	29	0.284
3	3	0.182
30	30	0.387
31	31	0.343
32	32	0.083
33	33	0.463
34	34	0.861
35	35	0.0199
36	36	0.19
37	37	0.157
38	38	0.727
39	39	0.567
4	4	0.752
40	40	0.707
41	41	0.233
42	42	0.432
43	43	0.145
44	44	0.0287
45	45	0.931
46	46	0.307
47	47	0.0455
48	48	0.171
49	49	0.0978
5	5	0.0959
50	50	0.418
51	51	0.659
52	52	0.687
53	53	0.899
54	54	0.192
55	55	0.54
56	56	0.341
57	57	0.143
58	58	0.25
59	59	0.187
6	6	0.978
60	60	0.976
61	61	0.916
62	62	0.063
63	63	0.279
64	64	0.665
65	65	0.268
66	66	0.579
67	67	0.409
68	68	0.0956
69	69	0.365
7	7	0.511
70	70	0.00287
71	71	0.377
72	72	0.531
73	73	0.198
74	74	0.954
75	75	0.071
76	76	0.351
77	77	0.696
78	78	0.779
79	79	0.757
8	8	0.0813
80	80	0.3
81	81	0.149
82	82	0.0559
83	83	0.344
84	84	0.318
85	85	0.13
86	86	0.674
87	87	0.113
88	88	0.765
89	89	0.502
9	9	0.688
90	90	0.0705
91	91	0.381
92	92	0.0325
93	93	0.565
94	94	0.321
95	95	0.124
96	96	0.326
97	97	0.436
98	98	0.401
99	99	0.779

de novo motifs identified by HOMER in promoters active in this sampleSummary:The result of HOMER in this sample is shown. Analyst:NA library id: CNhs10584

FANTOM5 (FF) ontology

Direct parent terms

is_a relathionship
EFO:0002091 biological replicate
FF:0011363 mouse kidney- embryo E16 sample

Ancestor terms (non development)Summary:Connected ontology terms with is_a, part_of or located_in relationship Analyst: Hideya Kawaji link to source data data

UBERON: Anatomy
0000468 (multi-cellular organism)
0000922 (embryo)
0002113 (kidney)
0002100 (trunk)
0000479 (tissue)
0000062 (organ)
0000475 (organism subdivision)
0006554 (urinary system structure)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000477 (anatomical cluster)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0003103 (compound organ)
0009569 (subdivision of trunk)
0000489 (cavitated compound organ)
0005177 (trunk region element)
0005172 (abdomen element)
0005173 (abdominal segment element)
0011143 (upper urinary tract)
0001008 (renal system)
0002417 (abdominal segment of trunk)
0000916 (abdomen)

FF: FANTOM5
0000102 (sample by type)
0000101 (sample by species)
0000103 (mouse sample)
0000001 (sample)
0000999 (fetal tissue sample)
0000292 (embryonic day sample - mouse)
0000004 (tissue sample)
0000299 (mouse embryonic day 16 sample)
0011363 (mouse kidney- embryo E16 sample)

Ancestor terms (development)Summary:Connected ontology terms with develops_from, derives_from or preceded_by relationship Analyst: Hideya Kawaji link to source data data
UBERON:0003104 (mesenchyme)
UBERON:0003918 (kidney mesenchyme)
UBERON:0007687 (kidney field)
FF:0000294 (mouse embryonic day 11 sample)

@@ Line 1: / Line 1: @@
 {{f5samples
-|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0000922,UBERON:0002113,UBERON:0002100,UBERON:0000926,UBERON:0000479,UBERON:0000062,UBERON:0000475,UBERON:0004120,UBERON:0006554,UBERON:0000061,UBERON:0000465,UBERON:0000480,UBERON:0000923,UBERON:0002050,UBERON:0005423,UBERON:0000481,UBERON:0000467,UBERON:0001062,UBERON:0003103,UBERON:0009569,UBERON:0005291,UBERON:0000489,UBERON:0005177,UBERON:0003104,UBERON:0005172,UBERON:0003918,UBERON:0006598,UBERON:0005173,UBERON:0002532,UBERON:0001008,UBERON:0002417,UBERON:0000916,UBERON:0009142,UBERON:0006603,UBERON:0005095,UBERON:0007687
+|DRA_sample_Accession=CAGE@SAMD00005783
+|accession_numbers=CAGE;DRX009006;DRR009880;DRZ001305;DRZ002688;DRZ012655;DRZ014038
+|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0000922,UBERON:0002113,UBERON:0002100,UBERON:0000479,UBERON:0000062,UBERON:0000475,UBERON:0006554,UBERON:0000061,UBERON:0000465,UBERON:0000477,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0003103,UBERON:0009569,UBERON:0000489,UBERON:0005177,UBERON:0005172,UBERON:0005173,UBERON:0011143,UBERON:0001008,UBERON:0002417,UBERON:0000916
 |ancestors_in_cell_lineage_facet=
 |ancestors_in_disease_facet=
+|ancestors_in_ff_facet=FF:0000102,FF:0000101,FF:0000103,FF:0000001,FF:0000999,FF:0000292,FF:0000004,FF:0000299,FF:0011363
 |comment=
 |created_by=
 |creation_date=
+|data_phase=2
+|datafreeze_phase=2
 |def=
 |expression_enrichment_score=chr10:22539932..22539956,-!p1@Tcf21!1.91!205.13!Tcf21;;chr11:83664365..83664383,+!p1@Hnf1b!1.87!73.26!Hnf1b;;chr6:52190467..52190500,-!p1@Hoxa10!1.79!60.86!Hoxa10;;chr11:84339016..84339044,-!p1@Lhx1!1.78!59.74!Lhx1;;chr2:74549968..74549996,+!p1@Hoxd3!1.68!57.48!Hoxd3;;chr11:96143666..96143725,+!p1@Hoxb8!1.67!51.85!Hoxb8;;chr11:96153767..96153822,+!p1@Hoxb6!1.66!67.62!Hoxb6;;chr2:24331085..24331100,-!p1@Pax8!1.61!39.45!Pax8;;chr19:59533221..59533271,+!p1@Emx2!1.59!46.21!Emx2;;chr15:102828658..102828678,+!p1@Hoxc6!1.58!37.19!Hoxc6;;chr2:104966766..104966786,+!p1@Wt1!1.54!51.85!Wt1;;chr1:42752574..42752621,+!p@chr1:42752574..42752621,+!1.51!39.45!Pou3f3;;chr17:86087592..86087615,-!p1@Six2!1.51!31.56!Six2;;chr5:140019865..140019886,+!p1@Uncx!1.50!30.43!Uncx;;chr6:52163319..52163342,-!p1@Hoxa3!1.49!42.83!Hoxa3;;chr15:102797288..102797302,+!p1@Hoxc10!1.48!29.30!Hoxc10;;chr1:120524520..120524528,+!p1@Tfcp2l1!1.43!73.26!Tfcp2l1;;chr6:52176164..52176195,-!p1@Hoxa9!1.41!30.43!Hoxa9;;chr2:104966874..104966907,+!p2@Wt1!1.41!24.80!Wt1;;chr13:99124189..99124205,+!p1@Foxd1!1.37!33.81!Foxd1;;chr6:52184901..52184959,-!p2@Hoxa10!1.37!22.54!Hoxa10;;chr1:19202352..19202354,+!p2@Tfap2b!1.37!22.54!Tfap2b;;chr11:96143843..96143868,+!p3@Hoxb8!1.35!21.41!Hoxb8;;chr11:34108085..34108092,-!p1@Foxi1!1.30!19.16!Foxi1;;chr2:74517609..74517621,+!p3@Hoxd11!1.30!19.16!Hoxd11;;chr2:74529970..74529997,+!p1@Hoxd10!1.28!18.03!Hoxd10;;chr5:140019843..140019858,+!p2@Uncx!1.28!18.03!Uncx;;chr6:52195795..52195825,-!p1@Hoxa11!1.28!18.03!Hoxa11;;chr14:98568971..98569025,-!p1@Dach1!1.25!127.36!Dach1;;chr6:52195763..52195792,-!p2@Hoxa11!1.25!16.91!Hoxa11;;chr2:74520343..74520383,+!p4@Hoxd11!1.25!16.91!Hoxd11;;chr8:123640063..123640077,+!p1@Foxc2!1.20!27.05!Foxc2;;chr11:96143962..96144035,+!p2@Hoxb8!1.19!14.65!Hoxb8;;chr2:9800207..9800234,-!p1@Gata3!1.17!41.70!Gata3;;chr19:59533139..59533152,+!p2@Emx2!1.16!13.52!Emx2;;chr5:140019816..140019825,+!p3@Uncx!1.16!13.52!Uncx;;chr15:102797225..102797243,+!p2@Hoxc10!1.13!12.40!Hoxc10;;chr2:103264213..103264233,+!p1@Elf5!1.13!12.40!Elf5;;chr10:50614546..50614568,+!p@chr10:50614546..50614568,+!1.13!12.40!Sim1;;chr2:74520048..74520064,+!p1@Hoxd11!1.09!11.27!Hoxd11;;chr2:104966465..104966479,+!p6@Wt1!1.09!11.27!Wt1;;chr8:123640090..123640101,+!p2@Foxc2!1.08!12.40!Foxc2;;chr14:98568761..98568814,-!p2@Dach1!1.07!74.39!Dach1;;chr11:96147952..96147967,+!p1@Hoxb7!1.07!13.52!Hoxb7;;chr6:52190668..52190682,-!p3@Hoxa10!1.05!10.14!Hoxa10;;chr2:74550015..74550057,+!p2@Hoxd3!1.05!10.14!Hoxd3;;chr10:119913546..119913583,-!p3@Hmga2!1.02!20.29!Hmga2;;chr1:137155026..137155042,-!p1@Elf3!1.01!55.23!Elf3;;chr2:104966933..104966966,+!p3@Wt1!1.00!9.02!Wt1;;chr2:105003277..105003280,+!p5@Wt1!1.00!9.02!Wt1;;chr6:52190858..52190873,-!p4@Hoxa10!1.00!9.02!Hoxa10;;chr6:52190840..52190853,-!p5@Hoxa10!1.00!9.02!Hoxa10;;chr7:17647736..17647772,-!p1@Hif3a!0.99!31.56!Hif3a;;chr15:35225845..35225867,+!p1@Osr2!0.99!22.54!Osr2;;chr7:77511403..77511450,-!p3@Nr2f2!0.99!19.16!Nr2f2;;chr19:5560600..5560617,-!p1@Ovol1!0.97!10.14!Ovol1;;chr10:119914001..119914078,-!p4@Hmga2!0.96!11.27!Hmga2;;chr12:3891810..3891829,+!p2@Dnmt3a!0.95!12.40!Dnmt3a;;chr3:29912058..29912071,-!p6@Mecom!0.95!9.02!Mecom;;chr10:102491237..102491291,-!p2@Alx1!0.95!7.89!Alx1;;chr2:103123925..103123959,-!p3@Ehf!0.95!7.89!Ehf;;chr2:163372884..163372904,+!p1@Hnf4a!0.95!7.89!Hnf4a;;chr10:119913310..119913366,-!p1@Hmga2!0.93!60.86!Hmga2;;chr11:85646303..85646329,+!p1@Tbx2!0.93!51.85!Tbx2;;chr3:30408603..30408668,-!p1@Mecom!0.93!18.03!Mecom;;chr11:101755669..101755686,-!p1@Meox1!0.92!13.52!Meox1;;chr11:96145450..96145517,+!p2@Hoxb7!0.92!11.27!Hoxb7;;chr14:17407549..17407575,-!p3@Rarb!0.92!11.27!Rarb;;chr12:28027561..28027591,-!p1@Sox11!0.90!47.34!Sox11;;chr2:115891534..115891589,-!p1@Meis2!0.89!101.44!Meis2;;chr16:14705961..14705978,+!p2@Snai2!0.89!32.69!Snai2;;chr8:94325486..94325510,-!p4@Irx3!0.89!9.02!Irx3;;chr2:104966662..104966673,+!p4@Wt1!0.89!6.76!Wt1;;chr1:19199236..19199258,+!p1@Tfap2b!0.89!6.76!Tfap2b;;chr19:59533163..59533185,+!p3@Emx2!0.89!6.76!Emx2;;chr5:115421065..115421088,-!p1@Hnf1a!0.89!6.76!Hnf1a;;chr6:52184880..52184893,-!p6@Hoxa10!0.89!6.76!Hoxa10;;chr2:74517742..74517758,+!p2@Hoxd11!0.89!6.76!Hoxd11;;chr14:98569030..98569059,-!p3@Dach1!0.86!31.56!Dach1;;chr14:17407878..17407926,-!p1@Rarb!0.86!14.65!Rarb;;chr10:119913278..119913298,-!p2@Hmga2!0.86!14.65!Hmga2;;chr2:115890469..115890485,-!p7@Meis2!0.86!10.14!Meis2;;chr3:30408674..30408716,-!p2@Mecom!0.84!10.14!Mecom;;chr11:96213288..96213332,+!p@chr11:96213288..96213332,+!0.83!10.14!Hoxb2;;chr10:119913792..119913820,-!p5@Hmga2!0.83!10.14!Hmga2;;chr4:122911056..122911065,+!p2@Heyl!0.83!9.02!Heyl;;chr11:101646127..101646147,-!p5@Etv4!0.83!6.76!Etv4;;chr2:115891427..115891441,-!p4@Meis2!0.82!12.40!Meis2;;chr13:72766250..72766273,+!p1@Irx2!0.82!9.02!Irx2;;chr13:72101178..72101203,-!p1@Irx1!0.82!9.02!Irx1;;chr14:22808697..22808715,-!p4@Zfp503!0.82!6.76!Zfp503;;chr15:102828642..102828653,+!p2@Hoxc6!0.82!5.64!Hoxc6;;chr1:189433521..189433548,+!p5@Esrrg!0.82!5.64!Esrrg;;chr2:103264245..103264268,+!p2@Elf5!0.82!5.64!Elf5;;chr2:74513125..74513143,+!p1@Hoxd12!0.82!5.64!Hoxd12;;chr2:9809357..9809371,-!p2@Gata3!0.82!5.64!Gata3;;chr2:74536026..74536039,+!p1@Hoxd9!0.82!5.64!Hoxd9;;chr3:29912169..29912182,-!p12@Mecom!0.82!5.64!Mecom;;chr2:74560109..74560131,+!p1@Hoxd4!0.82!5.64!Hoxd4;;chr2:74543202..74543213,+!p3@Hoxd8!0.82!5.64!Hoxd8;;chr11:96145393..96145407,+!p3@Hoxb7!0.82!5.64!Hoxb7;;chr11:96213183..96213188,+!p@chr11:96213183..96213188,+!0.82!5.64!Hoxb2;;chr6:85137520..85137563,+!p1@Emx1!0.82!5.64!Emx1;;chr6:52190760..52190767,-!p9@Hoxa10!0.82!5.64!Hoxa10;;chr19:44831390..44831414,+!p1@Pax2!0.82!5.64!Pax2;;chr7:77511234..77511302,-!p2@Nr2f2!0.81!39.45!Nr2f2;;chrX:110411840..110411860,+!p1@Dach2!0.81!6.76!Dach2;;chr12:3891753..3891801,+!p4@Dnmt3a!0.80!9.02!Dnmt3a;;chr7:77511622..77511657,-!p5@Nr2f2!0.79!6.76!Nr2f2;;chr7:77505617..77505632,-!p1@Nr2f2!0.78!254.72!Nr2f2;;chr14:22807083..22807104,-!p1@Zfp503!0.78!96.93!Zfp503;;chr6:88148650..88148669,+!p1@Gata2!0.78!46.21!Gata2;;chr4:154010918..154010931,-!p1@Prdm16!0.78!15.78!Prdm16;;chr17:28487603..28487626,-!p2@Tead3!0.78!11.27!Tead3;;chr2:74542918..74542971,+!p1@Hoxd8!0.78!7.89!Hoxd8;;chr11:96213434..96213452,+!p@chr11:96213434..96213452,+!0.78!6.76!Hoxb2;;chr11:101646566..101646603,-!p1@Etv4!0.77!16.91!Etv4;;chr11:85646427..85646451,+!p4@Tbx2!0.77!9.02!Tbx2;;chr13:40829137..40829205,-!p1@Tfap2a!0.77!5.64!Tfap2a;;chr14:22807107..22807119,-!p2@Zfp503!0.76!22.54!Zfp503;;chr13:31650185..31650201,+!p1@Foxq1!0.76!18.03!Foxq1;;chr10:126778916..126778974,-!p1@Gli1!0.76!11.27!Gli1;;chr4:154010409..154010466,-!p2@Prdm16!0.74!11.27!Prdm16;;chr3:3508024..3508069,+!p2@Hnf4g!0.74!4.51!Hnf4g;;chr2:74535796..74535808,+!p3@Hoxd9!0.74!4.51!Hoxd9;;chr2:9800094..9800108,-!p3@Gata3!0.74!4.51!Gata3;;chr2:104966436..104966455,+!p7@Wt1!0.74!4.51!Wt1;;chr1:19202185..19202187,+!p9@Tfap2b!0.74!4.51!Tfap2b;;chr19:59532915..59532940,+!p5@Emx2!0.74!4.51!Emx2;;chr2:24331116..24331125,-!p2@Pax8!0.74!4.51!Pax8;;chr19:59533595..59533628,+!p6@Emx2!0.74!4.51!Emx2;;chr1:57028125..57028149,-!p2@Satb2!0.74!4.51!Satb2;;chr10:102491405..102491416,-!p1@Alx1!0.74!4.51!Alx1;;chr11:96160360..96160397,+!p3@Hoxb6!0.74!4.51!Hoxb6;;chr11:96132637..96132652,+!p1@Hoxb9!0.74!4.51!Hoxb9;;chr11:96160426..96160443,+!p2@Hoxb6!0.74!4.51!Hoxb6;;chr10:88969376..88969395,-!p1@Nr1h4!0.74!4.51!Nr1h4;;chr11:96132767..96132796,+!p2@Hoxb9!0.74!4.51!Hoxb9;;chr12:37835248..37835260,+!p4@Meox2!0.74!4.51!Meox2;;chr15:102797170..102797182,+!p3@Hoxc10!0.74!4.51!Hoxc10;;chr14:52935831..52935842,-!p11@Sall2!0.74!4.51!Sall2;;chr14:98568683..98568698,-!p6@Dach1!0.73!5.64!Dach1;;chr13:72101141..72101158,-!p3@Irx1!0.73!5.64!Irx1;;chr10:12810631..12810649,+!p1@Plagl1!0.72!126.23!Plagl1;;chr4:122911086..122911112,+!p1@Heyl!0.72!56.35!Heyl;;chr7:52471143..52471186,+!p1@Tead2!0.72!50.72!Tead2;;chr2:115891409..115891425,-!p2@Meis2!0.72!13.52!Meis2;;chr14:17407970..17408015,-!p2@Rarb!0.72!12.40!Rarb;;chr8:94325321..94325366,-!p1@Irx3!0.72!11.27!Irx3;;chr2:115891381..115891392,-!p5@Meis2!0.72!9.02!Meis2;;chr18:76219118..76219155,+!p1@Zbtb7c!0.72!7.89!Zbtb7c;;chr11:74981654..74981658,-!p1@Hic1!0.71!18.03!Hic1;;chr18:65741935..65741964,+!p2@Zfp532!0.71!12.40!Zfp532;;chr1:170361730..170361769,-!p7@Pbx1!0.71!10.14!Pbx1;;chr14:56443806..56443848,+!p1@Nfatc4!0.71!9.02!Nfatc4;;chr13:78339476..78339515,-!p1@Nr2f1!0.71!6.76!Nr2f1;;chr8:90483433..90483457,-!p2@Zfp423!0.70!5.64!Zfp423;;chr17:37139432..37139444,+!p4@Zfp57!0.69!5.64!Zfp57;;chr13:72101161..72101177,-!p2@Irx1!0.69!5.64!Irx1;;chr4:150503457..150503498,-!p3@Camta1!0.69!4.51!Camta1;;chr2:160192793..160192809,-!p1@Mafb!0.68!65.37!Mafb;;chr2:180069370..180069409,-!p1@Gata5!0.68!4.51!Gata5;;chr15:50721942..50721987,-!p13@Trps1!0.68!4.51!Trps1;;chr9:71743854..71743909,-!p1@Tcf12!0.67!33.81!Tcf12;;chr18:55150011..55150059,-!p3@Zfp608!0.67!13.52!Zfp608;;chr4:54957910..54957954,+!p2@Zfp462!0.67!12.40!Zfp462;;chr9:63869729..63869749,-!p4@Smad6!0.67!7.89!Smad6;;chr4:54957886..54957907,+!p3@Zfp462!0.67!6.76!Zfp462;;chr12:37835120..37835133,+!p2@Meox2!0.67!5.64!Meox2;;chr13:37918684..37918701,+!p12@Rreb1!0.67!4.51!Rreb1;;chr6:52167459..52167492,-!p1@Hoxa7!0.67!4.51!Hoxa7;;chr6:72739185..72739232,-!p1@Tcf7l1!0.66!42.83!Tcf7l1;;chr12:12948633..12948651,-!p1@Mycn!0.66!39.45!Mycn;;chr19:28754692..28754757,-!p1@Glis3!0.66!16.91!Glis3;;chr1:170361777..170361797,-!p10@Pbx1!0.66!6.76!Pbx1;;chr1:170361678..170361689,-!p13@Pbx1!0.66!4.51!Pbx1;;chr3:133207214..133207228,-!p2@Tet2!0.66!4.51!Tet2;;chr4:154335024..154335039,+!p1@Hes5!0.66!4.51!Hes5;;chr11:101646155..101646170,-!p3@Etv4!0.66!4.51!Etv4;;chr11:18918917..18918944,-!p1@Meis1!0.65!51.85!Meis1;;chr14:55482892..55482988,-!p1@Homez!0.65!27.05!Homez;;chr11:99092233..99092273,-!p2@Smarce1!0.65!19.16!Smarce1;;chr12:34642510..34642530,+!p1@Twist1!0.65!12.40!Twist1;;chr7:6649134..6649167,-!p1@Zim1!0.64!21.41!Zim1;;chr16:43363968..43364001,+!p7@Zbtb20!0.64!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r1:135320989..135321043,-!p1@Sox13!0.40!24.80!Sox13;;chr5:138187341..138187406,+!p3@Tsc22d4!0.40!23.67!Tsc22d4;;chr18:55152206..55152251,-!p1@Zfp608!0.40!21.41!Zfp608;;chr8:81552152..81552208,+!p1@Zfp827!0.40!15.78!Zfp827;;chr12:110031227..110031254,+!p3@Yy1!0.40!12.40!Yy1;;chr2:152223469..152223512,-!p1@Sox12!0.40!11.27!Sox12;;chr2:44968775..44968795,-!p4@Zeb2!0.40!10.14!Zeb2;;chr2:44968721..44968734,-!p6@Zeb2!0.40!7.89!Zeb2;;chr17:45570455..45570479,-!p2@Cdc5l!0.40!7.89!Cdc5l;;chr4:62626594..62626651,+!p1@Zfp618!0.40!7.89!Zfp618;;chr7:91558392..91558434,-!p1@Arnt2!0.40!5.64!Arnt2;;chr8:83262929..83262957,-!p1@Smarca5!0.40!5.64!Smarca5;;chr2:34227446..34227511,-!p1@Pbx3!0.40!4.51!Pbx3;;chrX:48559079..48559108,-!p2@Mbnl3!0.40!4.51!Mbnl3;;chr4:118846454..118846506,-!p2@Zfp691!0.40!4.51!Zfp691;;chr3:90097275..90097302,+!p2@Gatad2b!0.40!4.51!Gatad2b;;chr3:135354903..135354945,-!p7@Nfkb1!0.40!4.51!Nfkb1;;chr18:83080278..83080293,+!p5@Zfp516!0.40!4.51!Zfp516;;chr17:25151251..25151279,-!p4@Cramp1l!0.40!3.38!Cramp1l;;chr7:38554763..38554780,-!p1@Zfp536!0.40!3.38!Zfp536;;chr17:35031524..35031539,+!p4@Zbtb12!0.40!2.25!Zbtb12;;chr18:76219161..76219176,+!p4@Zbtb7c!0.40!2.25!Zbtb7c;;chr15:102865088..102865107,+!p1@Hoxc4!0.40!2.25!Hoxc4;;chr10:126723307..126723319,-!p6@Mbd6!0.40!2.25!Mbd6;;chr14:64562503..64562524,+!p1@Sox7!0.39!12.40!Sox7;;chr18:35721834..35721851,+!p2@Matr3!0.39!11.27!Matr3;;chr18:65741358..65741415,+!p1@Zfp532!0.39!9.02!Zfp532;;chr6:47827619..47827639,+!p2@Zfp282!0.39!9.02!Zfp282;;chr5:120121446..120121461,+!p2@Tbx3!0.39!6.76!Tbx3;;chr9:72379991..72380014,+!p2@Rfx7!0.39!6.76!Rfx7;;chr7:16986617..16986632,+!p2@Zc3h4!0.39!5.64!Zc3h4;;chr18:11052485..11052508,+!p2@Gata6!0.39!5.64!Gata6;;chr7:30954700..30954715,-!p2@LOC677248,p2@Zfp146!0.39!4.51!Zfp146;;chr10:30375579..30375616,-!p3@Ncoa7!0.39!4.51!Ncoa7;;chr5:138187583..138187602,+!p6@Tsc22d4!0.39!3.38!Tsc22d4;;chr1:95651267..95651284,-!p4@Thap4!0.39!3.38!Thap4;;chr1:189821714..189821761,+!p1@Esrrg!0.39!3.38!Esrrg;;chr9:72122708..72122720,+!p3@Zfp280d!0.39!3.38!Zfp280d;;chr4:126700576..126700598,+!p7@Sfpq!0.39!3.38!Sfpq;;chr6:47998938..47998955,-!p2@Zfp777!0.39!2.25!Zfp777;;chr15:40486883..40486903,+!p4@Zfpm2!0.39!2.25!Zfpm2;;chr2:44968512..44968530,-!p1@Zeb2!0.38!47.34!Zeb2;;chr8:118231678..118231692,-!p2@Maf!0.38!19.16!Maf;;chrX:137077151..137077227,-!p2@Tsc22d3!0.38!14.65!Tsc22d3;;chr7:11080671..11080750,-!p1@Zik1!0.38!14.65!Zik1;;chr17:48061584..48061601,-!p2@Foxp4!0.38!13.52!Foxp4;;chr15:97738692..97738747,-!p1@Vdr!0.38!11.27!Vdr;;chr9:32443818..32443854,+!p2@Ets1!0.38!9.02!Ets1;;chr3:130813200..130813252,+!p1@Lef1!0.38!9.02!Lef1;;chrX:108810678..108810736,-!p1@Hdx!0.38!6.76!Hdx;;chr2:27532734..27532749,+!p2@Rxra!0.38!5.64!Rxra;;chr9:68501522..68501538,+!p4@Rora!0.38!3.38!Rora;;chr4:154010228..154010244,-!p4@Prdm16!0.38!2.25!Prdm16;;chr3:8667033..8667046,-!p3@Hey1!0.38!2.25!Hey1;;chr13:78339428..78339466,-!p2@Nr2f1!0.38!2.25!Nr2f1;;chr13:37917863..37917872,+!p14@Rreb1!0.38!2.25!Rreb1;;chr6:128312937..128313076,+!p1@Foxm1!0.37!29.30!Foxm1;;chr9:122832168..122832210,+!p1@Zfp105!0.37!15.78!Zfp105;;chr14:65977498..65977528,+!p1@Zfp395!0.37!13.52!Zfp395;;chr10:62328186..62328219,-!p1@Tet1!0.37!12.40!Tet1;;chr13:21545538..21545569,-!p2@Zfp187!0.37!9.02!Zfp187;;chr4:131817441..131817487,-!p1@Gmeb1!0.37!9.02!Gmeb1;;chr17:34784073..34784118,+!p2@Atf6b!0.37!7.89!Atf6b;;chr13:15555496..15555544,+!p1@Gli3!0.37!6.76!Gli3;;chr12:75009172..75009223,+!p3@Hif1a!0.37!4.51!Hif1a;;chr14:65977427..65977452,+!p4@Zfp395!0.37!4.51!Zfp395;;chr12:9581284..9581303,+!p2@Osr1!0.37!3.38!Osr1;;chr5:22940353..22940372,+!p3@Mll5!0.37!3.38!Mll5;;chr9:122812356..122812381,+!p@chr9:122812356..122812381,+!0.37!3.38!Gm8008;;chr18:55149986..55150009,-!p7@Zfp608!0.37!3.38!Zfp608;;chr2:34227524..34227547,-!p2@Pbx3!0.37!3.38!Pbx3;;chr1:120949925..120949947,-!p4@Gli2!0.37!3.38!Gli2;;chr2:154395552..154395561,-!p3@E2f1!0.37!2.25!E2f1;;chr7:17642053..17642066,-!p2@Hif3a!0.37!2.25!Hif3a;;chr3:130813736..130813752,+!p3@Lef1!0.37!2.25!Lef1;;chr13:112476264..112476282,+!p3@Mier3!0.37!2.25!Mier3;;chr16:30065394..30065398,+!p3@Hes1!0.37!2.25!Hes1;;chr7:19895384..19895399,-!p2@Fosb!0.37!2.25!Fosb;;chr16:50432467..50432522,-!p1@Bbx!0.36!40.57!Bbx;;chr17:32967140..32967197,-!p1@Zfp799!0.36!28.18!Zfp799;;chr4:133276801..133276891,-!p3@Arid1a!0.36!21.41!Arid1a;;chr3:14578609..14578687,+!p1@E2f5!0.36!19.16!E2f5;;chr18:69504157..69504184,+!p3@Tcf4!0.36!12.40!Tcf4;;chr17:4994697..4994730,+!p4@Arid1b!0.36!9.02!Arid1b;;chr9:65675514..65675547,-!p2@Zfp609!0.36!9.02!Zfp609;;chr15:100325682..100325698,-!p1@Csrnp2!0.36!9.02!Csrnp2;;chr11:62545367..62545412,-!p1@Zfp287!0.36!7.89!Zfp287;;chr8:72662966..72662991,-!p3@LOC100048268,p3@Rfxank!0.36!6.76!Rfxank;;chr7:134519542..134519569,-!p1@Zfp747!0.36!5.64!Zfp747;;chr5:22940320..22940331,+!p2@Mll5!0.36!5.64!Mll5;;chr16:42907554..42907591,+!p5@Zbtb20!0.36!4.51!Zbtb20;;chr18:79306577..79306592,-!p3@Setbp1!0.36!3.38!Setbp1;;chr9:63869802..63869815,-!p3@Smad6!0.36!3.38!Smad6;;chr1:193961837..193961849,-!p3@Rcor3!0.36!3.38!Rcor3;;chr13:96095124..96095144,+!p3@Zbed3!0.36!3.38!Zbed3;;chr6:128250471..128250519,-!p1@Tead4!0.36!3.38!Tead4;;chr11:102179350..102179375,-!p7@Ubtf!0.36!3.38!Ubtf;;chr11:85646341..85646352,+!p3@Tbx2!0.36!3.38!Tbx2;;chr10:44178474..44178487,-!p4@Prdm1!0.36!2.25!Prdm1;;chr2:162880306..162880319,+!p3@Mybl2!0.36!2.25!Mybl2;;chr10:107769168..107769215,+!p1@Pawr!0.35!20.29!Pawr;;chrX:45807329..45807370,-!p1@Elf4!0.35!13.52!Elf4;;chr4:128483680..128483715,-!p3@Zfp362!0.35!6.76!Zfp362;;chr13:99954640..99954681,+!p1@Zfp366!0.35!6.76!Zfp366;;chr17:56970481..56970551,-!p2@Rfx2!0.35!5.64!Rfx2;;chr18:80348151..80348181,-!p2@Adnp2!0.35!4.51!Adnp2;;chr17:32501360..32501371,-!p5@Wiz!0.35!2.25!Wiz;;chr13:72766279..72766296,+!p2@Irx2!0.35!2.25!Irx2;;chr2:156666727..156666753,+!p2@Tgif2!0.35!2.25!Tgif2;;chr11:97524680..97524700,+!p3@Mllt6!0.35!2.25!Mllt6;;chr11:69393894..69393921,+!p1@Trp53!0.34!181.46!Trp53;;chr2:181406327..181406350,-!p1@Sox18!0.34!61.99!Sox18;;chr16:22439681..22439698,-!p1@Etv5!0.34!33.81!Etv5;;chr6:64992801..64992894,+!p2@Smarcad1!0.34!28.18!Smarcad1;;chrX:45245644..45245666,-!p2@Smarca1!0.34!5.64!Smarca1;;chrX:48558950..48559016,-!p1@Mbnl3!0.34!5.64!Mbnl3;;chr15:50721616..50721632,-!p4@Trps1!0.34!4.51!Trps1;;chr15:57907991..57908010,-!p3@Zhx1,p6@9130401M01Rik!0.34!4.51!Zhx1;;chr3:94641455..94641486,+!p4@Pogz!0.34!4.51!Pogz;;chr14:76903992..76904056,+!p6@Tsc22d1!0.34!3.38!Tsc22d1;;chr15:76709662..76709676,+!p2@Zfp7!0.34!3.38!Zfp7;;chr2:30700788..30700824,+!p2@Prrx2!0.34!2.25!Prrx2;;chr8:72356384..72356434,+!p2@Pbx4!0.34!2.25!Pbx4;;chrX:103070839..103070856,-!p4@Atrx!0.34!2.25!Atrx;;chr7:37483231..37483263,+!p2@Tshz3!0.34!2.25!Tshz3;;chrX:103070746..103070764,-!p5@Atrx!0.34!2.25!Atrx;;chr10:62328047..62328076,-!p3@Tet1!0.34!2.25!Tet1;;chr4:126698555..126698583,+!p1@Sfpq!0.33!1062.83!Sfpq;;chr13:48356475..48356492,+!p1@Id4!0.33!41.70!Id4;;chr18:14131126..14131211,-!p1@Zfp521!0.33!40.57!Zfp521;;chr5:107125549..107125605,-!p1@Zfp644!0.33!33.81!Zfp644;;chr6:116578973..116579022,-!p1@Zfp422!0.33!32.69!Zfp422;;chr17:23723181..23723236,-!p1@Zfp13!0.33!18.03!Zfp13;;chr11:50641183..50641244,-!p1@Zfp354c!0.33!14.65!Zfp354c;;chrX:7339778..7339815,+!p2@Tfe3!0.33!12.40!Tfe3;;chr17:37139472..37139514,+!p1@Zfp57!0.33!12.40!Zfp57;;chr5:65194602..65194613,+!p3@Klf3!0.33!7.89!Klf3;;chr6:124959016..124959061,+!p3@Zfp384!0.33!4.51!Zfp384;;chr6:72739034..72739055,-!p3@Tcf7l1!0.33!3.38!Tcf7l1;;chr18:79306029..79306059,-!p2@Setbp1!0.33!3.38!Setbp1;;chr7:49761111..49761128,-!p2@ENSMUST00000174407,p2@uc009gmb.1!0.33!3.38!Zfp141;;chr4:97439519..97439539,+!p11@Nfia!0.33!3.38!Nfia;;chr5:134741947..134741948,-!p9@Gtf2i!0.33!2.25!Gtf2i;;chr10:86956396..86956411,-!p1@Ascl1!0.33!2.25!Ascl1;;chr1:135551736..135551746,-!p3@Zc3h11a!0.33!2.25!Zc3h11a;;chr9:110034493..110034502,+!p2@Smarcc1!0.33!2.25!Smarcc1;;chr17:37139455..37139469,+!p3@Zfp57!0.33!2.25!Zfp57;;chr19:10315252..10315266,-!p2@Gm98!0.33!2.25!Gm98;;chr16:25684232..25684285,+!p2@Trp63!0.33!1.13!Trp63;;chr19:46380346..46380360,+!p6@Nfkb2!0.33!1.13!Nfkb2;;chr16:43247391..43247422,+!p12@Zbtb20!0.33!1.13!Zbtb20;;chr17:37139555..37139562,+!p6@Zfp57!0.33!1.13!Zfp57;;chr16:43364036..43364047,+!p28@Zbtb20!0.33!1.13!Zbtb20;;chr19:12871064..12871095,-!p2@Zfp91!0.33!1.13!Zfp91;;chr17:86020115..86020128,+!p2@Six3!0.33!1.13!Six3;;chr19:5447692..5447711,+!p2@Fosl1!0.33!1.13!Fosl1;;chr16:14705668..14705683,+!p3@Snai2!0.33!1.13!Snai2;;chr19:44831420..44831432,+!p3@Pax2!0.33!1.13!Pax2;;chr11:83665637..83665671,+!p6@Hnf1b!0.33!1.13!Hnf1b;;chr10:75384163..75384185,-!p3@Smarcb1!0.33!1.13!Smarcb1;;chr10:5734660..5734670,-!p7@Esr1!0.33!1.13!Esr1;;chr11:69749347..69749356,+!p8@Ybx2!0.33!1.13!Ybx2;;chr11:69749367..69749385,+!p4@Ybx2!0.33!1.13!Ybx2;;chr10:80811972..80811985,-!p8@Hmg20b!0.33!1.13!Hmg20b;;chr11:96880072..96880079,+!p1@Sp6!0.33!1.13!Sp6;;chr11:90250999..90251013,-!p8@Hlf!0.33!1.13!Hlf;;chr11:96180069..96180089,+!p3@Hoxb4!0.33!1.13!Hoxb4;;chr10:119913266..119913277,-!p6@Hmga2!0.33!1.13!Hmga2;;chr11:44431430..44431437,+!p17@Ebf1!0.33!1.13!Ebf1;;chr11:100553754..100553787,-!p1@Zfp385c!0.33!1.13!Zfp385c;;chr11:120624106..120624107,+!p13@Hmga1-rs1,p14@Hmga1!0.33!1.13!Hmga1;;chr11:98614697..98614707,+!p15@Thra!0.33!1.13!Thra;;chr11:62271076..62271096,-!p19@Ncor1!0.33!1.13!Ncor1;;chr10:119913766..119913779,-!p10@Hmga2!0.33!1.13!Hmga2;;chr10:102491694..102491714,-!p3@Alx1!0.33!1.13!Alx1;;chr10:12780505..12780529,+!p10@Plagl1!0.33!1.13!Plagl1;;chr3:29911947..29911958,-!p14@Mecom!0.33!1.13!Mecom;;chr2:9809374..9809396,-!p4@Gata3!0.33!1.13!Gata3;;chr4:107107224..107107259,+!p2@Glis1!0.33!1.13!Glis1;;chr4:109650609..109650653,+!p1@Dmrta2!0.33!1.13!Dmrta2;;chr2:74543235..74543246,+!p7@Hoxd8!0.33!1.13!Hoxd8;;chr3:135257370..135257389,-!p9@Nfkb1!0.33!1.13!Nfkb1;;chr3:130815472..130815497,+!p6@Lef1!0.33!1.13!Lef1;;chr3:29912249..29912262,-!p26@Mecom!0.33!1.13!Mecom;;chr5:102094214..102094230,-!p1@Nkx6-1!0.33!1.13!Nkx6-1;;chr4:32325910..32325921,+!p8@Ba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6,-!p1@Nr2f6!0.25!33.81!Nr2f6;;chr2:48805082..48805137,+!p1@Mbd5!0.25!32.69!Mbd5;;chr11:18918959..18918976,-!p2@Meis1!0.25!21.41!Meis1;;chr8:72498160..72498214,-!p1@Gatad2a!0.25!20.29!Gatad2a;;chr9:36954842..36954908,-!p1@Pknox2!0.25!18.03!Pknox2;;chr10:79862089..79862129,-!p2@Mbd3!0.25!16.91!Mbd3;;chr17:31701694..31701799,+!p1@Pknox1!0.25!16.91!Pknox1;;chr9:20189534..20189590,-!p1@Zfp560!0.25!15.78!Zfp560;;chr10:20032304..20032324,+!p2@Bclaf1!0.25!14.65!Bclaf1;;chr3:94819338..94819384,-!p1@Zfp687!0.25!14.65!Zfp687;;chr4:136604692..136604722,-!p1@Zbtb40!0.25!14.65!Zbtb40;;chr11:52096804..52096896,-!p1@Tcf7!0.25!12.40!Tcf7;;chr9:32348943..32349001,-!p1@Fli1!0.25!12.40!Fli1;;chr4:135841976..135842029,+!p2@Zfp46!0.25!11.27!Zfp46;;chrX:103124643..103124660,-!p2@Atrx!0.25!10.14!Atrx;;chr2:162880327..162880385,+!p2@Mybl2!0.25!10.14!Mybl2;;chr11:62602904..62602945,-!p1@Zfp286!0.25!6.76!Zfp286;;chr11:44431687..44431706,+!p2@Ebf1!0.25!6.76!Ebf1;;chr13:30076168..30076222,-!p2@E2f3!0.25!6.76!E2f3;;chr8:72520139..72520157,-!p6@Gatad2a!0.25!5.64!Gatad2a;;chr6:14851287..14851342,+!p1@Foxp2!0.25!4.51!Foxp2;;chr6:51382677..51382783,+!p1@Nfe2l3!0.25!3.38!Nfe2l3;;chr16:44173384..44173407,+!p2@Gm608!0.25!3.38!Gm608;;chr6:47780508..47780583,-!p1@Zfp786!0.25!2.25!Zfp786;;chr6:38204214..38204267,-!p4@D630045J12Rik!0.25!2.25!D630045J12Rik;;chr2:30700881..30700916,+!p1@Prrx2!0.25!2.25!Prrx2;;chr2:65683890..65683907,+!p1@Csrnp3!0.25!2.25!Csrnp3;;chr13:59924354..59924366,-!p3@Zcchc6!0.25!2.25!Zcchc6;;chr12:3806962..3806973,+!p6@Dnmt3a!0.25!2.25!Dnmt3a;;chr14:76814784..76814803,+!p7@Tsc22d1!0.25!2.25!Tsc22d1;;chr12:39506841..39506848,+!p7@Etv1!0.25!1.13!Etv1;;chr13:55932591..55932622,-!p1@Pitx1!0.25!1.13!Pitx1;;chr14:52936049..52936057,-!p6@Sall2!0.25!1.13!Sall2;;chr13:31898767..31898785,+!p4@Foxc1!0.25!1.13!Foxc1;;chr6:14851344..14851364,+!p6@Foxp2!0.25!1.13!Foxp2;;chr7:123182248..123182264,-!p3@Sox6!0.25!1.13!Sox6;;chr7:144505980..144506010,-!p3@Ebf3!0.25!1.13!Ebf3;;chr5:31262571..31262582,-!p4@Preb!0.25!1.13!Preb;;chr16:43503594..43503634,+!p15@Zbtb20!0.25!1.13!Zbtb20;;chr9:30838314..30838336,+!p4@Zbtb44!0.25!1.13!Zbtb44;;chr9:63869705..63869713,-!p8@Smad6!0.25!1.13!Smad6;;chr2:77654936..77654988,-!p4@Zfp385b!0.25!1.13!Zfp385b;;chr4:135129447..135129467,-!p2@Grhl3!0.25!1.13!Grhl3;;chr4:107107175..107107204,+!p1@Glis1!0.25!1.13!Glis1;;chr2:120389480..120389491,-!p6@Zfp106!0.25!1.13!Zfp106;;chr11:98601972..98601986,+!p10@Thra!0.25!1.13!Thra;;chr14:76904313..76904328,+!p1@Tsc22d1!0.24!307.69!Tsc22d1;;chr17:27693558..27693580,+!p1@Hmga1-rs1,p1@Hmga1!0.24!72.13!Hmga1;;chr1:15795720..15795756,+!p1@Terf1!0.24!45.08!Terf1;;chr4:120887676..120887719,-!p1@Rlf!0.24!31.56!Rlf;;chrX:45947560..45947670,-!p1@Zfp280c!0.24!29.30!Zfp280c;;chr1:182499095..182499141,+!p2@Parp1!0.24!27.05!Parp1;;chr18:24179250..24179314,-!p1@Zfp191!0.24!24.80!Zfp191;;chr15:81575569..81575599,+!p2@Zc3h7b!0.24!16.91!Zc3h7b;;chr11:101413151..101413207,-!p1@Brca1!0.24!14.65!Brca1;;chr8:108160490..108160512,+!p2@Ctcf!0.24!12.40!Ctcf;;chr13:67601387..67601448,-!p2@Zfp58!0.24!12.40!Zfp58;;chr4:97444012..97444045,+!p4@Nfia!0.24!11.27!Nfia;;chr19:46380172..46380231,+!p2@Nfkb2!0.24!10.14!Nfkb2;;chr16:3847206..3847307,+!p1@Zfp174!0.24!6.76!Zfp174;;chr8:4613182..4613207,+!p2@Zfp958!0.24!5.64!Zfp958;;chr2:169458519..169458555,+!p2@Tshz2!0.24!5.64!Tshz2;;chr2:152223881..152223933,-!p3@Sox12!0.24!4.51!Sox12;;chr1:135320962..135320981,-!p2@Sox13!0.24!4.51!Sox13;;chr2:25562315..25562344,+!p3@Bmyc!0.24!4.51!Bmyc;;chr2:48805633..48805648,+!p5@Mbd5!0.24!2.25!Mbd5;;chr2:181327403..181327432,-!p3@Znf512b!0.24!2.25!Znf512b;;chr18:3337612..3337644,-!p8@Crem!0.24!2.25!Crem;;chr18:3337465..3337498,-!p6@Crem!0.24!2.25!Crem;;chr17:34729160..34729171,+!p3@Pbx2!0.24!2.25!Pbx2;;chr17:51951634..51951651,-!p6@Satb1!0.24!2.25!Satb1;;chr11:3189171..3189197,+!p4@Patz1!0.24!2.25!Patz1;;
+|ffid_belonging_in_development=UBERON:0003104,UBERON:0003918,UBERON:0007687,FF:0000294
 |fonse_cell_line=
 |fonse_cell_line_closure=
@@ Line 38: / Line 44: @@
 |is_a=EFO:0002091;;FF:0011363
 |is_obsolete=
+|library_id=CNhs10584
+|library_id_phase_based=2:CNhs10584
+|microRNAs=
+|microRNAs_nn=
+|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/mouse#cage;sample;464
+|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/mouse#cage;sample;464
+|mm10bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/mm10_v2/basic/mouse.tissue.hCAGE/kidney%252c%2520embryo%2520E16.CNhs10584.464-22A5.mm10.nobarcode.bam
+|mm10ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/mm10_v2/basic/mouse.tissue.hCAGE/kidney%252c%2520embryo%2520E16.CNhs10584.464-22A5.mm10.nobarcode.ctss.bed.gz
+|mm9bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/mouse.tissue.hCAGE/kidney%252c%2520embryo%2520E16.CNhs10584.464-22A5.mm9.nobarcode.bam
+|mm9ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/mouse.tissue.hCAGE/kidney%252c%2520embryo%2520E16.CNhs10584.464-22A5.mm9.ctss.bed.gz
+|mm9fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/mouse.tissue.hCAGE/kidney%252c%2520embryo%2520E16.CNhs10584.464-22A5.mm9.nobarcode.rdna.fa.gz
 |name=kidney, embryo E16
 |namespace=FANTOM5
@@ Line 43: / Line 60: @@
 |profile_cagescan=,,,
 |profile_hcage=CNhs10584,LSID653,release008,COMPLETED
-|profile_rnaseq=,,,
+|profile_rnaseq=
 |profile_srnaseq=,,,
+|repeat_enrich_byfamily=0.394642600571886,0,0,0,0,0,-0.0389840775269287,0,0,0,0,-0.0843392403965415,0,0,0,0,0,0,-0.191893350882575,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263443451095071,0,0,0,0.327783284444535,0,0.118460558948709,0,-0.135201476752584,-0.243193037901147,0.0579146464341836,0,0,0,0,0,0,0,0,0,0,0,0,0.261777736881095,0,0,0,0,-0.0428469550828748,0,0,0,0,0,-0.117389802908326,0.0171326271051486,0.169692241673452,-0.00190207020581479,0,0,0,-0.0901313623672817,0.327783284444535,0,0,0.0892339143643273,0.0456813772617634,-0.0788315948399074,0,0,0,0,0,0,-0.0814866010703366,-0.375909153258438,-0.105911360009132,0,0,0,0,0
 |rna_box=22
 |rna_catalog_number=
@@ Line 58: / Line 76: @@
 |rna_weight_ug=
 |sample_age=
+|sample_category=developmental
 |sample_cell_catalog=
 |sample_cell_line=
@@ Line 78: / Line 97: @@
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 |xref=
+|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_mouse;search_select_hide=table111:464-22A5;search_select_hide=table117:464-22A5
 }}

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FF:464-22A5: Difference between revisions

From FANTOM5_SSTAR

Latest revision as of 19:17, 4 June 2020

CNhs10584

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	Mozilla Cavendish skin modified by DaSch for the Web Community Wiki GitHub project page – Report a bug – Skin version: 2.6.0