FF:1382-42D1: Difference between revisions

Latest revision as of 19:05, 4 June 2020

Name:	liver, neonate N30
Species:	Mouse (Mus musculus)
Library ID:	CNhs11106
Sample type:	developmental
Genomic View:	UCSC
CAGEd-oPOSSUM:	link
ZENBU report :	link

Additional information

Sample information

strain	C57BL/6J
tissue	liver
dev stage	30 days neonate
sex	mixture
age	NA
cell type	CELL MIXTURE - tissue sample
cell line	NA
company	NA
collaboration	FANTOM5 OSC CORE (contact: Al Forrest)
External link for information	[{{{sample_info_link}}} {{{sample_info_link}}}]

RNA information

lot number	NA
catalog number	NA
sample type	NA
extraction protocol (Details)	NA

CAGE Accession numbers

Method		Sample accession id
CAGE		SAMD00005227

Library accession numbers

Library id		Method		Exp. accession id		Run accession id
CNhs11106		CAGE		DRX009029		DRR009903

Accession ID Mm9

Library id		BAM		CTSS
CNhs11106		DRZ001328		DRZ002711

Accession ID Mm10

Library id		BAM		CTSS
CNhs11106		DRZ012678		DRZ014061

Download raw sequence, BAM & CTSS

Mm9

Fasta	BAM	CTSS
download	download	donwload

Mm10

BAM	CTSS
download	donwload

Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.

Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. Analyst:NA link to dataset. data

CNhs11106

0	0
1	0
10	0
100	0
1000	0
1001	0.202
1002	-0.0941
1003	0.0147
1004	0
1005	0
1006	0
1007	-0.0267
1008	0
1009	0.0336
101	-0.0331
1010	0
1011	-0.298
1012	0
1013	0.536
1014	0
1015	-0.266
1016	-0.423
1017	0
1018	0
1019	0
102	0
1020	0
1021	0
1022	0.646
1023	0
1024	0.0811
1025	0.389
1026	0
1027	0
1028	0
1029	-0.005
103	-0.0659
1030	0
1031	-0.0495
1032	-0.4
1033	-0.0665
1034	1.033
1035	0
1036	-0.324
1037	0
1038	-0.17
1039	0.892
104	0
1040	-0.216
1041	0

Repeat families with enriched expression in this sampleSummary:Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed. Analyst:NA link to dataset. data

TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifsSummary:Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression Analyst: Michiel de Hoon link to dataset. data

library id: CNhs11106

Jaspar motif	Logo	P-value
MA0002.2	MA0002.2	0.587
MA0003.1	MA0003.1	0.672
MA0004.1	MA0004.1	0.455
MA0006.1	MA0006.1	0.216
MA0007.1	MA0007.1	0.0981
MA0009.1	MA0009.1	0.452
MA0014.1	MA0014.1	0.165
MA0017.1	MA0017.1	9.97493e-24
MA0018.2	MA0018.2	4.48636e-4
MA0019.1	MA0019.1	0.481
MA0024.1	MA0024.1	2.56906e-4
MA0025.1	MA0025.1	0.121
MA0027.1	MA0027.1	0.809
MA0028.1	MA0028.1	0.569
MA0029.1	MA0029.1	0.333
MA0030.1	MA0030.1	3.00124e-4
MA0031.1	MA0031.1	3.00358e-4
MA0035.2	MA0035.2	0.192
MA0038.1	MA0038.1	0.682
MA0039.2	MA0039.2	0.425
MA0040.1	MA0040.1	0.205
MA0041.1	MA0041.1	0.809
MA0042.1	MA0042.1	0.988
MA0043.1	MA0043.1	0.151
MA0046.1	MA0046.1	1.24382e-79
MA0047.2	MA0047.2	5.42224e-9
MA0048.1	MA0048.1	0.28
MA0050.1	MA0050.1	0.021
MA0051.1	MA0051.1	0.0152
MA0052.1	MA0052.1	0.00572
MA0055.1	MA0055.1	0.305
MA0057.1	MA0057.1	0.612
MA0058.1	MA0058.1	0.285
MA0059.1	MA0059.1	0.0989
MA0060.1	MA0060.1	0.00427
MA0061.1	MA0061.1	0.517
MA0062.2	MA0062.2	0.74
MA0065.2	MA0065.2	2.25501e-17
MA0066.1	MA0066.1	0.0239
MA0067.1	MA0067.1	0.297
MA0068.1	MA0068.1	0.423
MA0069.1	MA0069.1	0.407
MA0070.1	MA0070.1	0.442
MA0071.1	MA0071.1	4.45847e-6
MA0072.1	MA0072.1	2.3437e-6
MA0073.1	MA0073.1	0.687
MA0074.1	MA0074.1	0.0874
MA0076.1	MA0076.1	0.944
MA0077.1	MA0077.1	0.0537
MA0078.1	MA0078.1	0.757
MA0079.2	MA0079.2	0.456
MA0080.2	MA0080.2	0.402
MA0081.1	MA0081.1	0.552
MA0083.1	MA0083.1	0.00164
MA0084.1	MA0084.1	0.651
MA0087.1	MA0087.1	0.421
MA0088.1	MA0088.1	0.369
MA0090.1	MA0090.1	0.677
MA0091.1	MA0091.1	0.917
MA0092.1	MA0092.1	0.0976
MA0093.1	MA0093.1	0.471
MA0099.2	MA0099.2	0.467
MA0100.1	MA0100.1	0.569
MA0101.1	MA0101.1	0.919
MA0102.2	MA0102.2	0.179
MA0103.1	MA0103.1	0.166
MA0104.2	MA0104.2	0.94
MA0105.1	MA0105.1	0.145
MA0106.1	MA0106.1	0.062
MA0107.1	MA0107.1	0.767
MA0108.2	MA0108.2	3.05594e-4
MA0111.1	MA0111.1	0.867
MA0112.2	MA0112.2	7.07994e-6
MA0113.1	MA0113.1	0.247
MA0114.1	MA0114.1	3.75978e-23
MA0115.1	MA0115.1	4.25869e-11
MA0116.1	MA0116.1	0.188
MA0117.1	MA0117.1	0.526
MA0119.1	MA0119.1	0.0346
MA0122.1	MA0122.1	0.219
MA0124.1	MA0124.1	0.488
MA0125.1	MA0125.1	0.498
MA0131.1	MA0131.1	0.939
MA0135.1	MA0135.1	0.464
MA0136.1	MA0136.1	0.177
MA0137.2	MA0137.2	0.081
MA0138.2	MA0138.2	0.436
MA0139.1	MA0139.1	0.377
MA0140.1	MA0140.1	0.643
MA0141.1	MA0141.1	1.78798e-8
MA0142.1	MA0142.1	0.111
MA0143.1	MA0143.1	0.429
MA0144.1	MA0144.1	0.199
MA0145.1	MA0145.1	0.138
MA0146.1	MA0146.1	0.0307
MA0147.1	MA0147.1	0.957
MA0148.1	MA0148.1	7.11055e-12
MA0149.1	MA0149.1	0.00753
MA0150.1	MA0150.1	0.00681
MA0152.1	MA0152.1	0.564
MA0153.1	MA0153.1	3.10829e-56
MA0154.1	MA0154.1	0.158
MA0155.1	MA0155.1	0.559
MA0156.1	MA0156.1	0.677
MA0157.1	MA0157.1	3.4051e-4
MA0159.1	MA0159.1	4.13464e-4
MA0160.1	MA0160.1	5.80247e-6
MA0162.1	MA0162.1	0.528
MA0163.1	MA0163.1	0.00509
MA0164.1	MA0164.1	0.724
MA0258.1	MA0258.1	0.00506
MA0259.1	MA0259.1	0.656

FANTOM5 phase1 novel unique motifsSummary:Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above Analyst: Michiel de Hoon link to dataset. data

library id: CNhs11106

Novel motif	Logo	P-value
1	1	0.106
10	10	0.206
100	100	0.596
101	101	0.665
102	102	0.241
103	103	0.0106
104	104	0.776
105	105	0.821
106	106	0.0542
107	107	0.0922
108	108	0.531
109	109	0.0618
11	11	0.0642
110	110	0.0592
111	111	0.0249
112	112	0.00273
113	113	0.971
114	114	0.0118
115	115	0.274
116	116	0.653
117	117	0.0543
118	118	0.209
119	119	0.0586
12	12	0.358
120	120	0.548
121	121	0.691
122	122	0.288
123	123	0.193
124	124	0.504
125	125	0.316
126	126	0.222
127	127	0.817
128	128	0.0466
129	129	0.816
13	13	7.69856e-5
130	130	0.852
131	131	0.383
132	132	0.348
133	133	0.683
134	134	0.943
135	135	0.504
136	136	0.229
137	137	0.897
138	138	0.347
139	139	0.74
14	14	0.462
140	140	0.00928
141	141	0.366
142	142	0.105
143	143	0.793
144	144	0.475
145	145	0.0378
146	146	0.323
147	147	0.474
148	148	0.335
149	149	0.319
15	15	0.17
150	150	0.164
151	151	0.52
152	152	0.121
153	153	0.241
154	154	0.716
155	155	0.546
156	156	0.0418
157	157	0.697
158	158	0.654
159	159	0.494
160	160	0.186
161	161	0.657
162	162	0.611
163	163	0.166
164	164	0.0338
165	165	0.42
166	166	0.366
167	167	0.216
168	168	0.848
169	169	0.00331
17	17	0.065
18	18	0.907
19	19	0.0416
2	2	0.722
20	20	0.312
21	21	0.471
22	22	0.114
23	23	0.435
24	24	0.149
25	25	0.744
26	26	0.00326
27	27	0.916
28	28	0.392
29	29	0.28
3	3	0.0754
30	30	0.928
31	31	0.394
32	32	0.127
33	33	0.344
34	34	0.937
35	35	0.504
36	36	0.0584
37	37	0.0359
38	38	0.307
39	39	0.182
4	4	0.686
40	40	0.134
41	41	0.954
42	42	0.492
43	43	0.0821
44	44	0.0492
45	45	0.68
46	46	0.126
47	47	0.691
48	48	0.18
49	49	0.0447
5	5	0.122
50	50	0.585
51	51	0.277
52	52	0.391
53	53	0.535
54	54	0.339
55	55	0.744
56	56	0.452
57	57	0.788
58	58	0.275
59	59	0.245
6	6	0.756
60	60	0.103
61	61	0.196
62	62	0.106
63	63	0.0868
64	64	0.55
65	65	0.222
66	66	0.594
67	67	0.949
68	68	0.149
69	69	0.878
7	7	0.186
70	70	0.0216
71	71	0.0538
72	72	0.725
73	73	0.058
74	74	0.636
75	75	0.0155
76	76	0.894
77	77	0.451
78	78	0.0173
79	79	0.946
8	8	0.0128
80	80	0.75
81	81	0.639
82	82	0.0255
83	83	0.434
84	84	0.289
85	85	0.0304
86	86	0.146
87	87	0.21
88	88	0.76
89	89	0.166
9	9	0.881
90	90	0.0652
91	91	0.334
92	92	0.292
93	93	0.195
94	94	0.731
95	95	0.215
96	96	0.199
97	97	0.523
98	98	0.417
99	99	0.0914

de novo motifs identified by HOMER in promoters active in this sampleSummary:The result of HOMER in this sample is shown. Analyst:NA library id: CNhs11106

FANTOM5 (FF) ontology

Direct parent terms

is_a relathionship
EFO:0002091 biological replicate
FF:0011486 mouse liver- neonate N30 sample

Ancestor terms (non development)Summary:Connected ontology terms with is_a, part_of or located_in relationship Analyst: Hideya Kawaji link to source data data

UBERON: Anatomy
0000468 (multi-cellular organism)
0002107 (liver)
0002100 (trunk)
0000479 (tissue)
0001007 (digestive system)
0004119 (endoderm-derived structure)
0000062 (organ)
0000475 (organism subdivision)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0009569 (subdivision of trunk)
0002368 (endocrine gland)
0005177 (trunk region element)
0002365 (exocrine gland)
0005172 (abdomen element)
0006925 (digestive gland)
0002530 (gland)
0010317 (germ layer / neural crest derived structure)
0005173 (abdominal segment element)
0002417 (abdominal segment of trunk)
0000949 (endocrine system)
0002330 (exocrine system)
0000916 (abdomen)
0002423 (hepatobiliary system)

FF: FANTOM5
0000102 (sample by type)
0000101 (sample by species)
0000103 (mouse sample)
0000001 (sample)
0000004 (tissue sample)
0000303 (neonate sample - mouse)
0000310 (mouse neonate N30 sample)
0011486 (mouse liver- neonate N30 sample)

Ancestor terms (development)Summary:Connected ontology terms with develops_from, derives_from or preceded_by relationship Analyst: Hideya Kawaji link to source data data
UBERON:0001041 (foregut)
UBERON:0002532 (epiblast (generic))
UBERON:0006595 (presumptive endoderm)
UBERON:0003104 (mesenchyme)
UBERON:0004161 (septum transversum)
UBERON:0009497 (epithelium of foregut-midgut junction)
UBERON:0010316 (germ layer / neural crest)
FF:0000294 (mouse embryonic day 11 sample)

@@ Line 1: / Line 1: @@
 {{f5samples
-|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0000922,UBERON:0002107,UBERON:0002100,UBERON:0000483,UBERON:0002530,UBERON:0000926,UBERON:0000479,UBERON:0001007,UBERON:0000077,UBERON:0002368,UBERON:0000466,UBERON:0000062,UBERON:0004111,UBERON:0000475,UBERON:0004120,UBERON:0000025,UBERON:0004119,UBERON:0000061,UBERON:0000465,UBERON:0000480,UBERON:0000923,UBERON:0003914,UBERON:0007499,UBERON:0002050,UBERON:0005911,UBERON:0004921,UBERON:0005423,UBERON:0000477,UBERON:0000481,UBERON:0000467,UBERON:0001062,UBERON:0000119,UBERON:0000490,UBERON:0009569,UBERON:0005291,UBERON:0009854,UBERON:0003929,UBERON:0005177,UBERON:0002365,UBERON:0003104,UBERON:0005057,UBERON:0005172,UBERON:0006925,UBERON:0005256,UBERON:0001048,UBERON:0000925,UBERON:0006598,UBERON:0009497,UBERON:0004185,UBERON:0005173,UBERON:0000015,UBERON:0009856,UBERON:0002532,UBERON:0001555,UBERON:0002417,UBERON:0007026,UBERON:0001041,UBERON:0000949,UBERON:0002330,UBERON:0000916,UBERON:0002405,UBERON:0002423,UBERON:0009142,UBERON:0006235,UBERON:0006595,UBERON:0006603,UBERON:0008835,UBERON:0003894,UBERON:0004161,UBERON:0008836
+|DRA_sample_Accession=CAGE@SAMD00005227
+|accession_numbers=CAGE;DRX009029;DRR009903;DRZ001328;DRZ002711;DRZ012678;DRZ014061
+|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0002107,UBERON:0002100,UBERON:0000479,UBERON:0001007,UBERON:0004119,UBERON:0000062,UBERON:0000475,UBERON:0000061,UBERON:0000465,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0009569,UBERON:0002368,UBERON:0005177,UBERON:0002365,UBERON:0005172,UBERON:0006925,UBERON:0002530,UBERON:0010317,UBERON:0005173,UBERON:0002417,UBERON:0000949,UBERON:0002330,UBERON:0000916,UBERON:0002423
 |ancestors_in_cell_lineage_facet=
 |ancestors_in_disease_facet=
+|ancestors_in_ff_facet=FF:0000102,FF:0000101,FF:0000103,FF:0000001,FF:0000004,FF:0000303,FF:0000310,FF:0011486
 |comment=
 |created_by=
 |creation_date=
+|data_phase=2
+|datafreeze_phase=2
 |def=
 |expression_enrichment_score=chr10:80555320..80555378,-!p1@Creb3l3!2.25!204.56!Creb3l3;;chr1:173144144..173144176,+!p1@Nr1i3!2.24!174.16!Nr1i3;;chr2:163372884..163372904,+!p1@Hnf4a!2.24!173.20!Hnf4a;;chr10:88969376..88969395,-!p1@Nr1h4!2.04!108.55!Nr1h4;;chr5:135582751..135582788,+!p1@Mlxipl!1.99!367.14!Mlxipl;;chr1:173144100..173144138,+!p2@Nr1i3!1.91!81.05!Nr1i3;;chr16:38294860..38294924,-!p1@Nr1i2!1.90!78.16!Nr1i2;;chr7:19608891..19608895,-!p1@Foxa3!1.72!66.09!Foxa3;;chr11:90249521..90249551,-!p3@Hlf!1.67!45.83!Hlf;;chr9:74709695..74709722,+!p1@Onecut1!1.65!43.42!Onecut1;;chr10:88996295..88996335,-!p3@Nr1h4!1.64!50.66!Nr1h4;;chr11:100683839..100683890,-!p2@Stat5b!1.62!91.66!Stat5b;;chr10:88996336..88996380,-!p2@Nr1h4!1.57!44.87!Nr1h4;;chr4:133109285..133109308,+!p1@Nr0b2!1.52!31.84!Nr0b2;;chr2:77357622..77357704,-!p1@Zfp385b!1.49!79.12!Zfp385b;;chr6:90415250..90415271,+!p4@Klf15!1.41!24.60!Klf15;;chr15:85566184..85566238,+!p1@Ppara!1.40!35.22!Ppara;;chr7:35904304..35904320,+!p1@Cebpa!1.37!443.85!Cebpa;;chr2:163372869..163372882,+!p3@Hnf4a!1.37!22.67!Hnf4a;;chr6:90412582..90412601,+!p1@Klf15!1.36!101.80!Klf15;;chr18:64499674..64499696,+!p1@Onecut2!1.36!37.15!Onecut2;;chr15:85566537..85566552,+!p2@Ppara!1.35!21.23!Ppara;;chr18:64499706..64499721,+!p2@Onecut2!1.31!27.02!Onecut2;;chr2:91035254..91035271,-!p3@Nr1h3!1.27!21.71!Nr1h3;;chr16:43363190..43363242,+!p2@Zbtb20!1.26!52.59!Zbtb20;;chr5:115421065..115421088,-!p1@Hnf1a!1.25!16.89!Hnf1a;;chr3:94176733..94176794,+!p1@Rorc!1.24!124.47!Rorc;;chr2:147872790..147872821,-!p2@Foxa2!1.20!14.96!Foxa2;;chr19:37509324..37509337,+!p1@Hhex!1.19!101.80!Hhex;;chr2:91035197..91035237,-!p1@Nr1h3!1.13!26.05!Nr1h3;;chr2:147871627..147871641,-!p1@Foxa2!1.13!12.54!Foxa2;;chr6:90412608..90412630,+!p2@Klf15!1.12!25.09!Klf15;;chr7:52071956..52071978,-!p1@Atf5!1.11!384.03!Atf5;;chr15:85566241..85566253,+!p6@Ppara!1.10!11.58!Ppara;;chr10:80555285..80555291,-!p4@Creb3l3!1.10!11.58!Creb3l3;;chr6:90415281..90415295,+!p5@Klf15!1.10!11.58!Klf15;;chr13:31650185..31650201,+!p1@Foxq1!1.08!38.60!Foxq1;;chr1:138845748..138845766,-!p4@Nr5a2!1.07!13.99!Nr5a2;;chr14:63864056..63864102,-!p1@Gata4!1.05!17.85!Gata4;;chr10:88145766..88145770,-!p1@Spic!1.05!13.51!Spic;;chr15:85602655..85602680,+!p5@Ppara!1.05!10.13!Ppara;;chr2:91034924..91034946,-!p2@Nr1h3!1.03!12.06!Nr1h3;;chr10:80555299..80555306,-!p3@Creb3l3!1.03!9.65!Creb3l3;;chr1:138857076..138857105,-!p1@Nr5a2!1.03!9.65!Nr5a2;;chr9:69137716..69137744,+!p1@Rora!1.02!59.82!Rora;;chr1:13364477..13364492,-!p6@Ncoa2!1.01!11.58!Ncoa2;;chr1:138846079..138846103,-!p6@Nr5a2!1.01!9.17!Nr5a2;;chr17:87153519..87153533,+!p5@Epas1!1.00!13.51!Epas1;;chr1:138846009..138846038,-!p3@Nr5a2!1.00!10.13!Nr5a2;;chr19:23215673..23215753,+!p1@Klf9!0.96!122.06!Klf9;;chr1:191994550..191994623,-!p1@Prox1!0.96!57.41!Prox1;;chr9:24578720..24578735,-!p1@Tbx20!0.96!8.20!Tbx20;;chr10:88996274..88996286,-!p4@Nr1h4!0.96!8.20!Nr1h4;;chr6:90412556..90412581,+!p3@Klf15!0.95!17.85!Klf15;;chr2:27532479..27532509,+!p3@Rxra!0.93!15.92!Rxra;;chr1:133904946..133904974,+!p7@Elk4!0.93!11.58!Elk4;;chr1:138857048..138857071,-!p2@Nr5a2!0.92!7.24!Nr5a2;;chr11:60023912..60023930,-!p1@Srebf1!0.91!178.99!Srebf1;;chr1:138846047..138846074,-!p5@Nr5a2!0.91!7.72!Nr5a2;;chr2:160192793..160192809,-!p1@Mafb!0.90!108.55!Mafb;;chr2:160698288..160698358,-!p3@Zhx3!0.90!22.19!Zhx3;;chr16:43363152..43363186,+!p3@Zbtb20!0.89!15.92!Zbtb20;;chr11:83664334..83664353,+!p2@Hnf1b!0.89!6.75!Hnf1b;;chr15:75799634..75799645,+!p4@Zfp707!0.88!7.72!Zfp707;;chr8:59799772..59799789,+!p1@Hand2!0.87!19.30!Hand2;;chr14:100683884..100683908,-!p4@Klf12!0.87!12.54!Klf12;;chr17:87153505..87153516,+!p6@Epas1!0.87!9.17!Epas1;;chr2:27532754..27532815,+!p1@Rxra!0.86!192.49!Rxra;;chr2:27532513..27532525,+!p8@Rxra!0.86!7.24!Rxra;;chr1:181733737..181733755,-!p2@Ahctf1!0.84!19.78!Ahctf1;;chr7:52072324..52072336,-!p4@Atf5!0.83!5.79!Atf5;;chr5:65213356..65213412,+!p6@Klf3!0.82!12.54!Klf3;;chr18:3281034..3281104,-!p1@Crem!0.81!41.97!Crem;;chr2:133377954..133377973,+!p1@Bmp2!0.81!18.82!Bmp2;;chr2:148506935..148506954,+!p2@Gzf1!0.80!11.10!Gzf1;;chr16:38294929..38294940,-!p2@Nr1i2!0.80!5.31!Nr1i2;;chr10:80555398..80555409,-!p2@Creb3l3!0.80!5.31!Creb3l3;;chr6:90416275..90416286,+!p9@Klf15!0.80!5.31!Klf15;;chr18:3281750..3281776,-!p2@Crem!0.79!11.10!Crem;;chr6:39068163..39068176,-!p2@Parp12!0.77!9.65!Parp12;;chr1:194982959..194983007,+!p5@Irf6!0.77!4.82!Irf6;;chr1:169548377..169548430,+!p1@Rxrg!0.77!4.82!Rxrg;;chr1:138846117..138846129,-!p8@Nr5a2!0.77!4.82!Nr5a2;;chr1:191993385..191993405,-!p3@Prox1!0.77!4.82!Prox1;;chr2:167514456..167514473,+!p1@Cebpb!0.76!234.95!Cebpb;;chr15:102301130..102301147,+!p3@Pcbp2!0.76!15.92!Pcbp2;;chr2:160698668..160698679,-!p4@Zhx3!0.76!9.17!Zhx3;;chr11:121380640..121380655,-!p1@Zfp750!0.76!8.20!Zfp750;;chr14:32979290..32979309,+!p3@Gm6768,p3@Ncoa4!0.76!5.79!Ncoa4;;chr1:194979315..194979359,+!p1@Irf6!0.75!30.88!Irf6;;chr9:69137672..69137702,+!p2@Rora!0.74!21.23!Rora;;chr17:87153462..87153473,+!p3@Epas1!0.74!18.82!Epas1;;chr12:58646974..58647003,-!p1@Foxa1!0.74!6.27!Foxa1;;chr15:85566051..85566080,+!p4@Ppara!0.74!5.31!Ppara;;chr7:120351014..120351109,+!p1@Arntl!0.73!66.58!Arntl;;chr2:27531961..27531974,+!p7@Rxra!0.73!4.34!Rxra;;chr11:100683794..100683805,-!p4@Stat5b!0.73!4.34!Stat5b;;chr10:67599432..67599444,-!p4@Arid5b!0.72!7.24!Arid5b;;chr6:134780337..134780355,+!p3@Crebl2!0.72!5.79!Crebl2;;chr6:134780234..134780288,+!p1@Crebl2!0.71!14.47!Crebl2;;chr14:100683912..100683947,-!p2@Klf12!0.71!13.99!Klf12;;chr8:107793737..107793757,+!p2@Hsf4!0.71!4.82!Hsf4;;chr6:72185232..72185272,-!p1@Atoh8!0.70!12.54!Atoh8;;chr19:23215509..23215523,+!p4@Klf9!0.70!5.31!Klf9;;chr17:87153240..87153254,+!p1@Epas1!0.69!87.80!Epas1;;chr6:72849280..72849297,-!p6@Kcmf1!0.69!8.20!Kcmf1;;chr9:106355684..106355744,+!p5@Pcbp4!0.69!6.27!Pcbp4;;chr10:5734677..5734702,-!p4@Esr1!0.69!3.86!Esr1;;chr14:76887526..76887555,+!p10@Tsc22d1!0.69!3.86!Tsc22d1;;chr19:37511111..37511115,+!p2@Hhex!0.69!3.86!Hhex;;chr10:5734525..5734569,-!p3@Esr1!0.68!6.75!Esr1;;chr2:27532817..27532828,+!p6@Rxra!0.68!6.27!Rxra;;chr2:38206580..38206600,+!p2@Lhx2!0.68!4.82!Lhx2;;chr14:17407970..17408015,-!p2@Rarb!0.67!11.10!Rarb;;chr9:69137709..69137714,+!p7@Rora!0.67!4.82!Rora;;chr18:3281725..3281740,-!p3@Crem!0.67!4.82!Crem;;chr15:75799598..75799619,+!p3@Zfp707!0.66!8.20!Zfp707;;chr13:37949830..37949861,+!p7@Rreb1!0.66!7.24!Rreb1;;chr10:80809447..80809515,-!p5@Hmg20b!0.65!4.34!Hmg20b;;chr2:27532912..27532923,+!p9@Rxra!0.65!3.86!Rxra;;chr18:36441119..36441158,+!p2@Pura!0.64!9.17!Pura;;chr15:85565338..85565355,+!p7@Ppara!0.64!3.38!Ppara;;chr16:43247391..43247422,+!p12@Zbtb20!0.64!3.38!Zbtb20;;chr1:138857112..138857130,-!p7@Nr5a2!0.64!3.38!Nr5a2;;chr12:36219283..36219298,-!p2@Ahr!0.64!3.38!Ahr;;chr11:83664365..83664383,+!p1@Hnf1b!0.64!3.38!Hnf1b;;chr8:91568074..91568094,-!p1@Sall1!0.64!3.38!Sall1;;chr1:170362437..170362478,-!p5@Pbx1!0.63!11.58!Pbx1;;chr10:82226613..82226641,-!p4@Nfyb!0.63!10.13!Nfyb;;chr13:64253718..64253763,-!p2@Zfp367!0.63!9.65!Zfp367;;chr18:3337503..3337536,-!p7@Crem!0.63!6.27!Crem;;chr5:104183579..104183600,+!p9@Aff1!0.63!3.86!Aff1;;chr13:53076396..53076452,-!p1@Nfil3!0.62!67.06!Nfil3;;chr12:36219645..36219730,-!p1@Ahr!0.62!36.67!Ahr;;chr10:22539932..22539956,-!p1@Tcf21!0.62!9.65!Tcf21;;chr9:48644429..48644462,-!p3@Zbtb16!0.62!6.75!Zbtb16;;chr6:108610766..108610781,+!p2@Bhlhe40!0.62!6.27!Bhlhe40;;chr9:30838206..30838285,+!p2@Zbtb44!0.61!48.24!Zbtb44;;chr16:43363837..43363842,+!p11@Zbtb20!0.61!6.27!Zbtb20;;chr19:10315179..10315241,-!p1@Gm98!0.60!37.63!Gm98;;chr6:144730427..144730508,-!p1@Sox5!0.59!21.23!Sox5;;chr10:5734907..5734920,-!p11@Esr1!0.59!2.89!Esr1;;chr1:172797892..172797915,-!p1@Atf6!0.58!96.01!Atf6;;chr10:67599319..67599360,-!p2@Arid5b!0.58!37.63!Arid5b;;chr7:97591412..97591431,+!p2@Crebzf!0.58!8.68!Crebzf;;chr6:72185210..72185228,-!p3@Atoh8!0.58!5.31!Atoh8;;chr11:53164556..53164567,+!p5@Aff4!0.58!4.82!Aff4;;chr8:73905892..73905903,-!p5@Nr2f6!0.58!3.38!Nr2f6;;chr10:82226649..82226694,-!p2@Nfyb!0.57!21.23!Nfyb;;chr11:60036258..60036276,-!p3@Srebf1!0.57!5.31!Srebf1;;chr13:53076382..53076393,-!p2@Nfil3!0.57!4.82!Nfil3;;chr8:123608252..123608268,+!p1@Foxf1a!0.57!4.34!Foxf1a;;chr12:81213989..81214006,-!p1@Zfp36l1!0.56!168.37!Zfp36l1;;chr18:39649430..39649522,-!p2@Nr3c1!0.56!31.84!Nr3c1;;chr7:148452314..148452329,-!p1@Irf7!0.56!22.67!Irf7;;chr1:194979361..194979373,+!p2@Irf6!0.56!3.86!Irf6;;chr2:38206744..38206766,+!p1@Lhx2!0.56!3.38!Lhx2;;chr11:121380611..121380625,-!p3@Zfp750!0.56!3.38!Zfp750;;chr4:97444471..97444514,+!p1@Nfia!0.55!86.36!Nfia;;chr14:52640373..52640412,-!p1@Zfp219!0.55!18.33!Zfp219;;chrX:7339938..7339963,+!p1@Tfe3!0.55!15.92!Tfe3;;chr6:39068210..39068251,-!p1@Parp12!0.55!14.47!Parp12;;chr5:67698263..67698272,+!p3@Slc30a9!0.55!4.34!Slc30a9;;chr6:144157924..144157955,-!p2@Sox5!0.55!3.38!Sox5;;chr8:124806111..124806122,+!p3@Zfpm1!0.55!3.38!Zfpm1;;chr4:82151500..82151505,-!p11@Nfib!0.55!3.38!Nfib;;chr14:18493386..18493464,+!p1@Thrb!0.54!11.58!Thrb;;chr11:121380594..121380609,-!p2@Zfp750!0.54!4.82!Zfp750;;chr8:108583683..108583693,+!p3@Nfatc3!0.54!3.86!Nfatc3;;chr19:26679654..26679675,+!p1@Smarca2!0.53!28.46!Smarca2;;chr8:79426176..79426275,+!p1@Nr3c2!0.53!14.96!Nr3c2;;chr9:96619823..96619898,-!p2@Zbtb38!0.53!13.03!Zbtb38;;chr11:98821937..98821987,+!p4@Rara!0.53!6.27!Rara;;chr10:67599450..67599456,-!p8@Arid5b!0.53!2.89!Arid5b;;chr5:115420882..115420896,-!p3@Hnf1a!0.53!2.41!Hnf1a;;chr9:74714281..74714296,+!p5@Onecut1!0.53!2.41!Onecut1;;chr2:147871948..147871977,-!p3@Foxa2!0.53!2.41!Foxa2;;chr10:80889867..80889924,-!p1@Nfic!0.52!84.91!Nfic;;chr17:87153028..87153049,+!p2@Epas1!0.52!62.24!Epas1;;chr7:4967068..4967111,+!p1@Zfp524!0.52!33.29!Zfp524;;chr10:127707602..127707633,+!p1@Stat2!0.52!26.53!Stat2;;chr17:23004125..23004157,-!p3@Zfp945!0.52!8.68!Zfp945;;chr4:6917921..6917970,-!p2@Tox!0.52!7.72!Tox;;chr11:53583960..53584007,+!p2@Irf1!0.52!5.79!Irf1;;chr5:104183477..104183548,+!p6@Aff1!0.52!5.31!Aff1;;chr10:67599375..67599386,-!p3@Arid5b!0.52!4.82!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Maz!0.22!0.96!Maz;;chr6:92041522..92041531,+!p7@Nr2c2!0.22!0.96!Nr2c2;;chr19:23215446..23215457,+!p8@Klf9!0.22!0.96!Klf9;;chr1:92950099..92950109,+!p3@Lrrfip1!0.22!0.96!Lrrfip1;;chr5:138526311..138526375,+!p1@Zkscan1!0.21!52.10!Zkscan1;;chr7:26035739..26035757,-!p1@Erf!0.21!35.70!Erf;;chr5:72950853..72950930,-!p1@Nfxl1!0.21!25.09!Nfxl1;;chr1:75188717..75188804,+!p1@ENSMUST00000125384,p1@ENSMUST00000127625,p1@ENSMUST00000131788,p1@ENSMUST00000134233,p1@ENSMUST00000134378,p1@ENSMUST00000145459,p1@ENSMUST00000151887,p1@ENSMUST00000152233!0.21!19.78!Ankzf1;;chr12:25336211..25336274,+!p1@Klf11!0.21!14.47!Klf11;;chr11:100721761..100721851,+!p1@Stat5a!0.21!10.13!Stat5a;;chr19:55816398..55816409,+!p5@Tcf7l2!0.21!6.27!Tcf7l2;;chr1:186556410..186556424,-!p1@Hlx!0.21!3.86!Hlx;;chr9:21420610..21420621,+!p5@Smarca4!0.21!3.86!Smarca4;;chr11:120494669..120494688,-!p2@Mafg!0.21!2.89!Mafg;;chr17:21145981..21145998,+!p2@Zfp160!0.21!1.93!Zfp160;;chr13:59924354..59924366,-!p3@Zcchc6!0.21!1.93!Zcchc6;;chr19:23215469..23215494,+!p2@Klf9!0.21!1.45!Klf9;;chr5:147760370..147760377,+!p6@Gtf3a!0.21!1.45!Gtf3a;;chr8:47825166..47825178,+!p2@Irf2!0.21!1.45!Irf2;;chr11:90251852..90251855,-!p4@Hlf!0.21!0.96!Hlf;;chr5:77695181..77695196,+!p6@Rest!0.21!0.96!Rest;;chr15:81633224..81633235,+!p5@Tef!0.21!0.96!Tef;;chr6:52663725..52663794,+!p1@Tax1bp1!0.20!213.72!Tax1bp1;;chr5:3647838..3648009,-!p1@Gatad1!0.20!83.46!Gatad1;;chr17:79336371..79336414,-!p1@Cebpz!0.20!68.02!Cebpz;;chr15:36937137..36937157,-!p2@Gm10193,p2@Zfp706!0.20!42.94!Zfp706;;chr4:82151653..82151706,-!p2@Nfib!0.20!40.04!Nfib;;chr12:110031495..110031585,+!p1@Yy1!0.20!37.15!Yy1;;chr11:102180255..102180318,-!p1@Ubtf!0.20!31.84!Ubtf;;chr10:80813050..80813114,-!p2@Hmg20b!0.20!14.96!Hmg20b;;chr13:42147384..42147441,+!p1@Hivep1!0.20!13.03!Hivep1;;chr15:75771454..75771521,+!p1@Zfp623!0.20!12.54!Zfp623;;chr5:104183219..104183236,+!p2@Aff1!0.20!9.17!Aff1;;chr2:91077082..91077122,-!p1@Ddb2!0.20!8.20!Ddb2;;chr4:43575544..43575565,+!p2@Creb3!0.20!7.72!Creb3;;chr11:70577930..70577985,+!p1@Zfp3!0.20!7.72!Zfp3;;chr7:25039763..25039831,+!p1@Zfp108!0.20!6.27!Zfp108;;chr8:112603610..112603656,+!p1@Zfp612!0.20!5.79!Zfp612;;chr2:72817659..72817725,-!p5@Sp3!0.20!5.31!Sp3;;chr11:69579401..69579427,+!p2@Zbtb4!0.20!4.82!Zbtb4;;chr11:62272010..62272050,-!p2@Ncor1!0.20!3.86!Ncor1;;chr17:45692642..45692663,+!p1@Nfkbie!0.20!3.86!Nfkbie;;chr1:138521510..138521526,+!p2@Zfp281!0.20!3.38!Zfp281;;chr5:138187181..138187192,+!p5@Tsc22d4!0.20!2.89!Tsc22d4;;chr5:34530277..34530292,-!p3@Mxd4!0.20!2.89!Mxd4;;chr5:107125778..107125803,-!p4@Zfp644!0.20!2.41!Zfp644;;chr12:119539732..119539762,-!p3@Sp4!0.20!2.41!Sp4;;chr17:34729160..34729171,+!p3@Pbx2!0.20!1.93!Pbx2;;chr17:3557785..3557797,-!p3@Tfb1m!0.20!1.93!Tfb1m;;chr2:90936978..90937023,+!p3@Sfpi1!0.20!1.93!Sfpi1;;chr6:72185553..72185612,-!p2@Atoh8!0.20!1.93!Atoh8;;chr5:120120667..120120685,+!p3@Tbx3!0.20!1.93!Tbx3;;chr19:5424878..5424890,-!p7@Drap1!0.20!1.45!Drap1;;chr12:100802129..100802145,-!p4@Foxn3!0.20!1.45!Foxn3;;chr17:25152634..25152648,-!p8@Cramp1l!0.20!0.96!Cramp1l;;chr17:71202982..71202985,-!p7@Tgif1!0.20!0.96!Tgif1;;chr6:108610474..108610491,+!p5@Bhlhe40!0.20!0.96!Bhlhe40;;chr5:31262543..31262555,-!p3@Preb!0.20!0.96!Preb;;chr1:38721792..38721845,-!p1@Aff3!0.20!0.96!Aff3;;chr7:135056024..135056042,+!p1@Myst1!0.19!40.04!Myst1;;chr2:165818125..165818167,+!p1@Ncoa3!0.19!36.67!Ncoa3;;chr2:18314363..18314465,-!p1@Dnajc1!0.19!33.77!Dnajc1;;chr8:87324243..87324277,-!p1@Nfix!0.19!33.29!Nfix;;chr3:96001503..96001557,-!p1@Bola1!0.19!28.95!Bola1;;chr12:32635078..32635111,-!p1@Hbp1!0.19!28.95!Hbp1;;chr16:98183746..98183801,-!p1@Zfp295!0.19!14.96!Zfp295;;chr17:34053127..34053141,+!p1@Zbtb22!0.19!14.47!Zbtb22;;chr10:57206160..57206220,+!p1@Hsf2!0.19!14.47!Hsf2;;chr7:26052688..26052742,+!p1@Cic!0.19!9.17!Cic;;chr10:114821807..114821852,-!p2@Thap2!0.19!8.68!Thap2;;chr11:23670953..23671028,-!p1@Rel!0.19!7.24!Rel;;chr5:92391901..92391936,+!p1@Thap6!0.19!6.27!Thap6;;chr15:75799717..75799742,+!p1@Zfp707!0.19!4.82!Zfp707;;chr15:57526206..57526241,+!p2@Zhx2!0.19!3.86!Zhx2;;chr8:108160826..108160879,+!p3@Ctcf!0.19!3.38!Ctcf;;chr9:68501568..68501592,+!p3@Rora!0.19!2.41!Rora;;chr18:60720468..60720472,+!p2@Rbm22!0.19!1.93!Rbm22;;chr13:67229127..67229153,+!p2@Zfp759!0.19!1.93!Zfp759;;chr2:103143336..103143367,-!p1@Ehf!0.19!1.45!Ehf;;chr11:102178005..102178022,-!p8@Ubtf!0.19!1.45!Ubtf;;chr5:104183237..104183248,+!p7@Aff1!0.19!1.45!Aff1;;chr3:19957878..19957885,+!p2@Hltf!0.19!0.96!Hltf;;chr13:67433434..67433446,-!p3@Zfp595!0.19!0.96!Zfp595;;chr6:52141694..52141715,-!p1@Hoxa4!0.19!0.96!Hoxa4;;chr16:3744192..3744206,+!p4@Zfp263!0.19!0.96!Zfp263;;chr1:4486530..4486557,-!p4@Sox17!0.19!0.96!Sox17;;chr1:181733959..181733977,-!p4@Ahctf1!0.19!0.96!Ahctf1;;chr15:57907747..57907798,-!p1@9130401M01Rik,p1@Zhx1!0.18!36.18!Zhx1;;chr14:55482892..55482988,-!p1@Homez!0.18!8.68!Homez;;chrX:103124643..103124660,-!p2@Atrx!0.18!8.68!Atrx;;chr6:133985993..133986029,+!p2@Etv6!0.18!8.20!Etv6;;chr5:9160908..9160912,-!p2@Dmtf1!0.18!4.82!Dmtf1;;chr14:79881330..79881415,+!p3@Elf1!0.18!3.86!Elf1;;chr1:172797920..172797931,-!p3@Atf6!0.18!3.38!Atf6;;chr3:30993883..30993898,+!p2@Skil!0.18!2.89!Skil;;chrX:7339829..7339855,+!p3@Tfe3!0.18!2.89!Tfe3;;chr10:127080141..127080160,+!p2@Stat6!0.18!2.89!Stat6;;chr5:140267510..140267555,+!p2@Mafk!0.18!2.41!Mafk;;chr1:95651346..95651383,-!p3@Thap4!0.18!2.41!Thap4;;chr4:108151497..108151514,+!p3@Zcchc11!0.18!1.93!Zcchc11;;chr4:6917971..6918000,-!p3@Tox!0.18!1.93!Tox;;chrX:45947787..45947812,-!p3@Zfp280c!0.18!1.93!Zfp280c;;chr11:90250944..90250982,-!p2@Hlf!0.18!1.45!Hlf;;chr18:36953486..36953503,+!p2@Zmat2!0.18!1.45!Zmat2;;chr19:23216166..23216191,+!p6@Klf9!0.18!0.96!Klf9;;chr7:119822892..119822901,+!p7@Tead1!0.18!0.96!Tead1;;chr6:16848347..16848391,-!p1@Tfec!0.18!0.96!Tfec;;chr1:64167889..64167898,-!p8@Klf7!0.18!0.96!Klf7;;chr9:63869890..63869908,-!p6@Smad6!0.18!0.96!Smad6;;chr13:59924433..59924504,-!p1@Zcchc6!0.17!29.43!Zcchc6;;chr1:181733756..181733833,-!p1@Ahctf1!0.17!25.09!Ahctf1;;chr15:81494344..81494388,+!p1@L3mbtl2!0.17!14.96!L3mbtl2;;chr18:39650303..39650371,-!p1@Nr3c1!0.17!14.96!Nr3c1;;chr10:107769168..107769215,+!p1@Pawr!0.17!13.03!Pawr;;chr3:32409487..32409563,+!p1@Zfp639!0.17!9.17!Zfp639;;chr4:133801494..133801519,-!p2@Zfp593!0.17!8.68!Zfp593;;chr19:6996294..6996324,-!p2@Esrra!0.17!8.20!Esrra;;chr8:72520015..72520053,-!p2@Gatad2a!0.17!8.20!Gatad2a;;chr11:100800771..100800798,-!p2@Stat3!0.17!8.20!Stat3;;chr19:26681929..26681987,+!p4@Smarca2!0.17!6.75!Smarca2;;chr4:120498270..120498285,-!p3@Nfyc!0.17!4.34!Nfyc;;chr11:97524415..97524455,+!p2@Mllt6!0.17!4.34!Mllt6;;chr17:84587167..84587239,-!p2@Zfp36l2!0.17!3.86!Zfp36l2;;chr6:133985709..133985735,+!p5@Etv6!0.17!2.89!Etv6;;chr14:75684121..75684132,+!p2@Zc3h13!0.17!2.89!Zc3h13;;chr2:128793085..128793116,+!p2@Zc3h6!0.17!2.41!Zc3h6;;chr3:135354349..135354371,-!p6@Nfkb1!0.17!1.93!Nfkb1;;chr8:72520121..72520135,-!p12@Gatad2a!0.17!1.93!Gatad2a;;chr7:25917492..25917512,-!p1@Pou2f2!0.17!1.45!Pou2f2;;chr7:46773162..46773172,+!p2@Zfp619!0.17!1.45!Zfp619;;chr18:69681483..69681514,+!p11@Tcf4!0.17!1.45!Tcf4;;chr7:134169999..134170010,-!p13@Maz!0.17!1.45!Maz;;chr7:134169459..134169468,-!p15@Maz!0.17!0.96!Maz;;chr6:144157991..144158007,-!p9@Sox5!0.17!0.48!Sox5;;chr5:120120834..120120845,+!p8@Tbx3!0.17!0.48!Tbx3;;chr5:31270977..31270988,+!p3@Tcf23!0.17!0.48!Tcf23;;chr5:77524043..77524064,-!p9@Hopx!0.17!0.48!Hopx;;chr6:115311308..115311317,+!p10@Pparg!0.17!0.48!Pparg;;chr6:29479308..29479325,+!p3@Irf5!0.17!0.48!Irf5;;chr7:123177325..123177336,-!p13@Sox6!0.17!0.48!Sox6;;chr7:17200230..17200240,-!p15@Grlf1!0.17!0.48!Grlf1;;chr6:52664439..52664461,+!p4@Tax1bp1!0.17!0.48!Tax1bp1;;chr6:99385340..99385362,-!p11@Foxp1!0.17!0.48!Foxp1;;chr6:144157869..144157876,-!p26@Sox5!0.17!0.48!Sox5;;chr6:14851403..14851422,+!p8@Foxp2!0.17!0.48!Foxp2;;chr7:52252978..52252989,+!p5@Irf3!0.17!0.48!Irf3;;chr7:31065553..31065603,+!p@chr7:31065553..31065603,+!0.17!0.48!Thap8;;chr8:87232404..87232415,-!p22@Nfix!0.17!0.48!Nfix;;chr7:89137554..89137565,-!p2@Bnc1!0.17!0.48!Bnc1;;chr9:74714303..74714318,+!p2@Onecut1!0.17!0.48!Onecut1;;chr9:118387742..118387753,+!p3@Eomes!0.17!0.48!Eomes;;chr8:87238155..87238187,-!p13@Nfix!0.17!0.48!Nfix;;chr7:52960663..52960677,+!p6@Dbp!0.17!0.48!Dbp;;chr11:96976641..96976646,-!p1@Tbx21!0.17!0.48!Tbx21;;chr11:23671230..23671264,-!p6@Rel!0.17!0.48!Rel;;chr11:102180656..102180663,-!p24@Ubtf!0.17!0.48!Ubtf;;chr11:98407340..98407359,-!p4@Ikzf3!0.17!0.48!Ikzf3;;chr11:23977965..23977974,+!p11@Bcl11a!0.17!0.48!Bcl11a;;chr11:100721492..100721499,+!p5@Stat5a!0.17!0.48!Stat5a;;chr11:98614335..98614349,+!p8@Thra!0.17!0.48!Thra;;chr11:98338697..98338709,-!p9@Ikzf3!0.17!0.48!Ikzf3;;chr11:58717647..58717659,-!p3@Zfp39!0.17!0.48!Zfp39;;chr10:67599527..67599530,-!p9@Arid5b!0.17!0.48!Arid5b;;chr11:83666422..83666446,+!p4@Hnf1b!0.17!0.48!Hnf1b;;chr11:78317000..78317005,+!p1@Sebox!0.17!0.48!Sebox;;chr11:62271076..62271096,-!p19@Ncor1!0.17!0.48!Ncor1;;chr11:98822047..98822072,+!p9@Rara!0.17!0.48!Rara;;chr14:52640336..52640341,-!p20@Zfp219!0.17!0.48!Zfp219;;chr12:58647114..58647128,-!p2@Foxa1!0.17!0.48!Foxa1;;chr14:63890545..63890560,-!p5@Gata4!0.17!0.48!Gata4;;chr13:44825163..44825176,+!p18@Jarid2!0.17!0.48!Jarid2;;chr13:44936055..44936066,+!p20@Jarid2!0.17!0.48!Jarid2;;chr15:100430393..100430410,-!p3@Pou6f1!0.17!0.48!Pou6f1;;chr16:43364036..43364047,+!p28@Zbtb20!0.17!0.48!Zbtb20;;chr15:81494404..81494415,+!p2@L3mbtl2!0.17!0.48!L3mbtl2;;chr19:45225276..45225304,+!p2@Tlx1!0.17!0.48!Tlx1;;chr16:43236037..43236050,+!p35@Zbtb20!0.17!0.48!Zbtb20;;chr18:69681575..69681579,+!p41@Tcf4!0.17!0.48!Tcf4;;chr16:95923706..95923717,+!p6@Ets2!0.17!0.48!Ets2;;chr17:47906140..47906150,+!p6@Tfeb!0.17!0.48!Tfeb;;chr16:91270091..91270143,+!p2@Olig1!0.17!0.48!Olig1;;chr15:85602581..85602598,+!p8@Ppara!0.17!0.48!Ppara;;chr19:46380346..46380360,+!p6@Nfkb2!0.17!0.48!Nfkb2;;chr16:18588291..18588301,-!p2@Tbx1!0.17!0.48!Tbx1;;chr17:51971991..51972003,-!p4@Satb1!0.17!0.48!Satb1;;chr4:44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!0.11!0.96!Irf4;;chr8:87237732..87237745,-!p7@Nfix!0.11!0.96!Nfix;;chr10:67599361..67599372,-!p5@Arid5b!0.11!0.96!Arid5b;;chr19:55817590..55817625,+!p11@Tcf7l2!0.11!0.96!Tcf7l2;;chr19:23216132..23216157,+!p3@Klf9!0.11!0.96!Klf9;;chr18:36441100..36441113,+!p3@Pura!0.11!0.48!Pura;;chr14:56223387..56223401,+!p3@Irf9!0.11!0.48!Irf9;;chr11:100800621..100800633,-!p5@Stat3!0.11!0.48!Stat3;;chr5:137042233..137042245,-!p4@Cux1!0.11!0.48!Cux1;;chr12:56593574..56593592,-!p1@Nfkbia!0.10!58.38!Nfkbia;;chr4:40216811..40216882,-!p1@Topors!0.10!20.75!Topors;;chr14:22320101..22320119,+!p1@Myst4!0.10!14.96!Myst4;;chr1:141318773..141318840,+!p1@Zbtb41!0.10!12.54!Zbtb41;;chr2:128793119..128793179,+!p1@Zc3h6!0.10!8.68!Zc3h6;;chr13:67601387..67601448,-!p2@Zfp58!0.10!8.68!Zfp58;;chr17:47873985..47874056,+!p1@Tfeb!0.10!8.68!Tfeb;;chr14:56223010..56223067,+!p1@Irf9!0.10!8.20!Irf9;;chr13:21454695..21454752,+!p1@Zscan12!0.10!5.79!Zscan12;;chr4:119406389..119406411,+!p1@Hivep3!0.10!4.82!Hivep3;;chr3:5218629..5218684,+!p1@Zfhx4!0.10!2.89!Zfhx4;;chr4:131817511..131817537,-!p2@Gmeb1!0.10!2.89!Gmeb1;;chr1:120524520..120524528,+!p1@Tfcp2l1!0.10!2.41!Tfcp2l1;;chr6:99216488..99216534,-!p2@Foxp1!0.10!2.41!Foxp1;;chr3:90097217..90097233,+!p3@Gatad2b!0.10!1.93!Gatad2b;;chr16:43619101..43619151,+!p6@Zbtb20!0.10!1.93!Zbtb20;;chr2:31428221..31428244,+!p2@Fubp3!0.10!1.93!Fubp3;;chr11:96690779..96690790,-!p3@Nfe2l1!0.10!1.93!Nfe2l1;;chr2:169458838..169458859,+!p4@Tshz2!0.10!1.45!Tshz2;;chr17:45692676..45692695,+!p2@Nfkbie!0.10!1.45!Nfkbie;;chr16:23988686..23988693,-!p2@Bcl6!0.10!1.45!Bcl6;;chr17:71200415..71200427,-!p5@Tgif1!0.10!0.96!Tgif1;;chr5:138188113..138188145,+!p9@Tsc22d4!0.10!0.96!Tsc22d4;;chr11:98636685..98636696,-!p7@Nr1d1!0.10!0.96!Nr1d1;;chr8:94325847..94325869,-!p3@Irx3!0.10!0.96!Irx3;;chr16:43510301..43510313,+!p24@Zbtb20!0.10!0.48!Zbtb20;;chr16:55838757..55838774,-!p2@Nfkbiz!0.10!0.48!Nfkbiz;;chr17:37139519..37139531,+!p5@Zfp57!0.10!0.48!Zfp57;;chr15:40486854..40486867,+!p7@Zfpm2!0.10!0.48!Zfpm2;;chr13:59923965..59924003,-!p2@Zcchc6!0.10!0.48!Zcchc6;;chr4:108132526..108132533,+!p11@Zcchc11!0.10!0.48!Zcchc11;;chr2:90936886..90936898,+!p5@Sfpi1!0.10!0.48!Sfpi1;;chr10:67599461..67599470,-!p6@Arid5b!0.10!0.48!Arid5b;;chr10:114821382..114821392,-!p8@Thap2!0.10!0.48!Thap2;;chr1:52065508..52065522,+!p2@Stat4!0.10!0.48!Stat4;;chr1:87546602..87546617,+!p2@Sp100!0.10!0.48!Sp100;;chr6:52664406..52664434,+!p3@Tax1bp1!0.10!0.48!Tax1bp1;;chr2:120389531..120389614,-!p1@Zfp106!0.09!82.02!Zfp106;;chrX:148667771..148667803,+!p1@Kdm5c!0.09!62.24!Kdm5c;;chr16:55822241..55822258,-!p1@Nfkbiz!0.09!34.25!Nfkbiz;;chr8:72498160..72498214,-!p1@Gatad2a!0.09!13.99!Gatad2a;;chr18:80904854..80904919,-!p2@Nfatc1!0.09!12.54!Nfatc1;;chr8:4613152..4613177,+!p1@Zfp958!0.09!12.06!Zfp958;;chr7:105851601..105851647,+!p2@Prkrir!0.09!9.65!Prkrir;;chr1:167932744..167932778,-!p1@Pou2f1!0.09!9.17!Pou2f1;;chr11:95574298..95574344,+!p1@Zfp652,p4@Phospho1!0.09!9.17!Zfp652;;chr7:6107541..6107572,-!p1@Zfp787!0.09!7.72!Zfp787;;chr11:50872733..50872809,+!p1@Zfp354a!0.09!4.34!Zfp354a;;chr16:42875952..42875974,+!p4@Zbtb20!0.09!3.38!Zbtb20;;chr3:152059326..152059358,+!p3@Gm8261,p3@Zzz3!0.09!2.89!Zzz3;;chr4:108131994..108132056,+!p2@Zcchc11!0.09!2.89!Zcchc11;;chr4:63064364..63064384,-!p1@Akna!0.09!2.41!Akna;;chr12:110031207..110031224,+!p5@Yy1!0.09!2.41!Yy1;;chr5:145962744..145962760,-!p2@Zkscan14!0.09!1.45!Zkscan14;;chr16:43619057..43619078,+!p8@Zbtb20!0.09!1.45!Zbtb20;;chr19:26679596..26679607,+!p8@Smarca2!0.09!1.45!Smarca2;;chr8:87643578..87643593,-!p1@Zfp791!0.09!1.45!Zfp791;;chr9:122775126..122775133,-!p3@Zfp445!0.09!0.96!Zfp445;;chr10:82226709..82226720,-!p6@Nfyb!0.09!0.96!Nfyb;;chr13:37870281..37870293,+!p10@Rreb1!0.09!0.96!Rreb1;;chr15:50721211..50721234,-!p6@Trps1!0.09!0.96!Trps1;;chr12:85559762..85559778,-!p5@C130039O16Rik!0.09!0.96!C130039O16Rik;;chr3:51144740..51144743,-!p7@Elf2!0.09!0.96!Elf2;;
+|ffid_belonging_in_development=UBERON:0001041,UBERON:0002532,UBERON:0006595,UBERON:0003104,UBERON:0004161,UBERON:0009497,UBERON:0010316,FF:0000294
 |fonse_cell_line=
 |fonse_cell_line_closure=
@@ Line 36: / Line 42: @@
 |has_quality=
 |id=FF:1382-42D1
-|is_a=EFO:0002091;;FF:0000004;;FF:0000103;;FF:0011486
+|is_a=EFO:0002091;;FF:0011486
+|is_obsolete=
+|library_id=CNhs11106
+|library_id_phase_based=2:CNhs11106
+|microRNAs=
+|microRNAs_nn=
+|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/mouse#cage;sample;1382
+|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/mouse#cage;sample;1382
+|mm10bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/mm10_v2/basic/mouse.tissue.hCAGE/liver%252c%2520neonate%2520N30.CNhs11106.1382-42D1.mm10.nobarcode.bam
+|mm10ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/mm10_v2/basic/mouse.tissue.hCAGE/liver%252c%2520neonate%2520N30.CNhs11106.1382-42D1.mm10.nobarcode.ctss.bed.gz
+|mm9bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/mouse.tissue.hCAGE/liver%252c%2520neonate%2520N30.CNhs11106.1382-42D1.mm9.nobarcode.bam
+|mm9ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/mouse.tissue.hCAGE/liver%252c%2520neonate%2520N30.CNhs11106.1382-42D1.mm9.ctss.bed.gz
+|mm9fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/mouse.tissue.hCAGE/liver%252c%2520neonate%2520N30.CNhs11106.1382-42D1.mm9.nobarcode.rdna.fa.gz
 |name=liver, neonate N30
 |namespace=FANTOM5
@@ Line 42: / Line 60: @@
 |profile_cagescan=,,,
 |profile_hcage=CNhs11106,LSID733,release008,COMPLETED
-|profile_rnaseq=,,,
+|profile_rnaseq=
 |profile_srnaseq=,,,
+|repeat_enrich_byfamily=0.436214935293623,0,0,0,0,0,0.082662253155104,0,0,0,0,-0.0843392403965415,0,0,0,0,0,0,-0.191893350882575,0,0,0,0.72770320828214,0,0,0,0,0,0,0,0,0,0.032046883660466,0,0,0,0.170978156452844,0,0.0571956342903505,-0.0418937317952928,-0.241759264549498,-0.984211366477826,-0.269868638010351,0,0,0,0,0,0,0,0,0,0,0,0,0.104972608889403,0,0,0,0,0,0,0.13582179433539,0,0,0,-0.0480819511880925,0.222386062232967,-0.158091042771083,0.0488963692295684,0,0,-0.0787037500278776,0,0,0,-0.00667533608584546,-0.232211285877102,0.3198358798722,0.0921465616129364,0,0,0,0,0,0,0.173225789650551,0.35705234835151,0.0712121091537749,0,0,0,0,0
 |rna_box=42
 |rna_catalog_number=
@@ Line 57: / Line 76: @@
 |rna_weight_ug=
 |sample_age=
+|sample_category=developmental
 |sample_cell_catalog=
 |sample_cell_line=
@@ Line 76: / Line 96: @@
 |sample_tissue=liver
 |top_motifs=FOXA2:3.81456964515;FOX{F1,F2,J1}:3.57074172145;FOX{D1,D2}:3.25653194027;NFIL3:3.01214256864;NKX2-2,8:2.9685767062;HNF1A:2.89133401121;RXR{A,B,G}_{NR1H2,PPAR}dimers:2.68751852294;CEBPA,B_DDIT3:2.58538628953;RBPJ:2.46265840987;HNF4A_NR2F1,2:2.30349255005;FOXM1:2.17346716562;STAT2,4,6:2.08594058378;HLF:2.04066662036;ONECUT1,2:1.99939977893;ARID5B:1.85628967189;NR6A1:1.8528394067;NR1H4:1.81544881784;FOXQ1:1.74444273863;bHLH_family:1.71795596327;NFIX:1.63710409097;AR:1.55132352102;NR5A1,2:1.39110836679;FOXD3:1.30557610786;RORA:1.29392544916;RXR{A,B,G}:1.22639887619;NR3C1:1.16562927192;HAND1,2:1.16315367563;BPTF:1.15586492058;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:1.12801616295;GZF1:1.04482627548;RXRA_VDR{dimer}:0.930892559975;ALX4:0.887949437567;TP53:0.841817253882;ESRRA:0.805361576755;NFE2L1:0.785054179967;NFE2:0.692085138814;HMGA1,2:0.614898880959;IRF1,2:0.537038443715;DBP:0.441856685675;POU3F1..4:0.418866085271;FOXO1,3,4:0.407609947873;STAT1,3:0.399831954958;FOXN1:0.368661508084;SREBF1,2:0.344090448557;DMAP1_NCOR{1,2}_SMARC:0.341290683288;ZBTB6:0.295311599704;PITX1..3:0.270146197897;CUX2:0.265389383397;TLX1..3_NFIC{dimer}:0.25409233262;SNAI1..3:0.214580682591;NKX3-2:0.192070533033;GCM1,2:0.180351311747;IRF7:0.153623996657;YY1:0.141644821624;LEF1_TCF7_TCF7L1,2:0.139743459695;HOX{A4,D4}:0.120130311254;SP1:0.062242755852;STAT5{A,B}:0.0589489091495;MTF1:0.0368414858621;UFEwm:0.0366818548228;LHX3,4:0.0221666780872;EVI1:0.0165115089967;PAX1,9:0.00219082147634;ATF6:-0.00961278640742;NFY{A,B,C}:-0.0370436498443;FOXP1:-0.0546856816289;ELK1,4_GABP{A,B1}:-0.113772208931;GATA6:-0.118392081938;TFAP4:-0.152210117384;HIF1A:-0.154629890289;ELF1,2,4:-0.159820317647;ZEB1:-0.177503370779;GFI1B:-0.193851209647;TLX2:-0.196322870514;POU1F1:-0.208950340078;MYOD1:-0.229321193585;SOX5:-0.232350153566;EN1,2:-0.23310352654;ADNP_IRX_SIX_ZHX:-0.235118190514;ATF5_CREB3:-0.240561327183;MYFfamily:-0.246444760301;IKZF1:-0.253233039139;FOX{I1,J2}:-0.255044479209;PDX1:-0.260397925703;CREB1:-0.272950523144;SPI1:-0.307797794652;PAX5:-0.311137456095;ETS1,2:-0.35852547058;PBX1:-0.359864266719;VSX1,2:-0.363186554718;SPIB:-0.36896520665;NHLH1,2:-0.399168507422;ZNF143:-0.408376050812;TEF:-0.416787297909;MYB:-0.459101378298;NFKB1_REL_RELA:-0.46709172826;MYBL2:-0.46956457824;PAX4:-0.478709043472;ZBTB16:-0.521364586823;NFE2L2:-0.524029236209;BACH2:-0.540582658944;AIRE:-0.558939729383;PAX8:-0.560216116541;TBP:-0.584096375209;HOX{A5,B5}:-0.588727942212;T:-0.591914833871;TEAD1:-0.593313263526;EBF1:-0.599233892495;NANOG{mouse}:-0.627591810962;GTF2A1,2:-0.646374905994;FOXP3:-0.654881134087;RUNX1..3:-0.658563930029;REST:-0.667155970088;MED-1{core}:-0.686302860677;ZNF238:-0.697262842435;AHR_ARNT_ARNT2:-0.70802400499;NRF1:-0.716568740283;CDX1,2,4:-0.726620703716;TAL1_TCF{3,4,12}:-0.72841972802;HMX1:-0.729141783902;NKX2-3_NKX2-5:-0.729351985518;HOXA9_MEIS1:-0.740272340025;ATF4:-0.76069881979;MEF2{A,B,C,D}:-0.809208114067;ZNF423:-0.809909830085;GTF2I:-0.852400669986;FOSL2:-0.855778817782;ZFP161:-0.877127639103;PPARG:-0.890170653267;MAZ:-0.890679964909;TGIF1:-0.905395875846;OCT4_SOX2{dimer}:-0.910860176017;PATZ1:-0.912868678951;HIC1:-0.921375423212;EGR1..3:-0.924128523861;LMO2:-0.928409446903;ESR1:-0.929902345847;TOPORS:-0.942087026758;MAFB:-0.94400702674;PAX2:-0.945559710613;GATA4:-0.998955652423;MTE{core}:-1.00282078557;SRF:-1.01456622489;TFCP2:-1.02603565774;XCPE1{core}:-1.06984035235;PAX6:-1.07678893439;GFI1:-1.097165299;TFAP2{A,C}:-1.11746287142;KLF4:-1.13975557352;ZIC1..3:-1.15677825099;GLI1..3:-1.16895191804;FOS_FOS{B,L1}_JUN{B,D}:-1.19876276103;JUN:-1.2019046086;MZF1:-1.20339310622;RFX1:-1.22803929014;PRRX1,2:-1.24978948472;TFAP2B:-1.25386865075;SOX17:-1.25424039114;CRX:-1.35313599581;HSF1,2:-1.36511168632;NFATC1..3:-1.37394894275;RFX2..5_RFXANK_RFXAP:-1.37695490515;SMAD1..7,9:-1.39004459785;BREu{core}:-1.41497049551;E2F1..5:-1.41511961621;ALX1:-1.4158223419;NANOG:-1.47035957772;FOXL1:-1.49957723997;PRDM1:-1.53416295603;POU6F1:-1.55028457583;RREB1:-1.55083427929;NKX2-1,4:-1.57804905283;ZNF148:-1.66712193938;SOX{8,9,10}:-1.67423817836;IKZF2:-1.72951594854;SOX2:-1.78860757789;ATF2:-1.79768199064;SPZ1:-1.81012929626;CDC5L:-1.83696174497;NKX3-1:-1.98927515376;POU2F1..3:-2.04166504671;TFDP1:-2.20137991924;TBX4,5:-2.215253167;EP300:-2.27400157357;NKX6-1,2:-2.36819540696;ZNF384:-2.51362468506;HES1:-2.53596680271;POU5F1:-2.70940264536;HBP1_HMGB_SSRP1_UBTF:-2.73064614469
+|xref=
+|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_mouse;search_select_hide=table111:1382-42D1;search_select_hide=table117:1382-42D1
 }}

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FF:1382-42D1: Difference between revisions

From FANTOM5_SSTAR

Latest revision as of 19:05, 4 June 2020

CNhs11106

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	Mozilla Cavendish skin modified by DaSch for the Web Community Wiki GitHub project page – Report a bug – Skin version: 2.6.0