FFCP PHASE1:Hg19::chr8:68864487..68864512,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=80243 | |EntrezGene=80243 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=22950 | |HGNC=22950 | ||
|TSSclassifier=strong | |||
|UniProt=Q70Z35 | |UniProt=Q70Z35 | ||
|association_with_transcript=-90bp_to_ENST00000529398,NM_024870,NM_025170,uc003xxu.1,uc003xxv.1,uc011lez.1_5end | |association_with_transcript=-90bp_to_ENST00000529398,NM_024870,NM_025170,uc003xxu.1,uc003xxv.1,uc011lez.1_5end | ||
|cluster_id=chr8:68864487..68864512,+ | |||
|coexpression_cluster_id=C1544 | |coexpression_cluster_id=C1544 | ||
|description=CAGE_peak_4_at_PREX2_5end | |description=CAGE_peak_4_at_PREX2_5end | ||
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|ontology_enrichment_celltype=CL:0002139!3.81e-18!24;CL:0000115!6.10e-14!35;CL:0000071!5.36e-13!18;CL:0002546!5.36e-13!18;CL:0002078!1.92e-09!44;CL:0000047!1.97e-08!8;CL:0005020!8.64e-07!6;CL:0002138!8.64e-07!6;CL:0005022!8.64e-07!6 | |ontology_enrichment_celltype=CL:0002139!3.81e-18!24;CL:0000115!6.10e-14!35;CL:0000071!5.36e-13!18;CL:0002546!5.36e-13!18;CL:0002078!1.92e-09!44;CL:0000047!1.97e-08!8;CL:0005020!8.64e-07!6;CL:0002138!8.64e-07!6;CL:0005022!8.64e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0002139;2.08e-10;24 | |ontology_enrichment_celltype_v019=CL:0002139;2.08e-10;24 | ||
|ontology_enrichment_celltype_v019_2=CL:0002139,1.64e-10,24;CL:0000115,1.83e-08,36;CL:0000047,3.02e-08,8 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.20e-12;82!UBERON:0006215;1.89e-07;3 | |ontology_enrichment_development_v019=UBERON:0006601;1.20e-12;82!UBERON:0006215;1.89e-07;3 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.37e-59!115;UBERON:0001017!1.90e-50!82;UBERON:0005743!1.85e-48!86;UBERON:0001049!2.17e-46!57;UBERON:0005068!2.17e-46!57;UBERON:0006241!2.17e-46!57;UBERON:0007135!2.17e-46!57;UBERON:0000073!4.96e-43!94;UBERON:0001016!4.96e-43!94;UBERON:0000955!1.74e-38!69;UBERON:0006238!1.74e-38!69;UBERON:0002616!3.41e-38!59;UBERON:0002780!4.89e-37!41;UBERON:0001890!4.89e-37!41;UBERON:0006240!4.89e-37!41;UBERON:0003080!8.47e-36!42;UBERON:0003075!3.57e-33!86;UBERON:0007284!3.57e-33!86;UBERON:0001893!4.55e-31!34;UBERON:0002346!9.87e-31!90;UBERON:0002020!1.11e-30!34;UBERON:0003528!1.11e-30!34;UBERON:0002791!6.16e-30!33;UBERON:0001869!2.46e-29!32;UBERON:0004111!4.87e-23!241;UBERON:0004121!4.87e-23!169;UBERON:0003056!2.57e-22!61;UBERON:0000924!6.71e-22!173;UBERON:0006601!6.71e-22!173;UBERON:0000956!8.83e-22!25;UBERON:0000203!8.83e-22!25;UBERON:0002619!2.39e-21!22;UBERON:0000025!4.44e-21!194;UBERON:0000153!1.00e-20!129;UBERON:0007811!1.00e-20!129;UBERON:0000033!3.82e-20!123;UBERON:0001950!3.41e-19!20;UBERON:0000477!8.16e-18!286;UBERON:0001986!5.36e-13!18;UBERON:0004638!5.36e-13!18;UBERON:0004852!5.36e-13!18;UBERON:0003076!1.88e-11!15;UBERON:0003057!1.88e-11!15;UBERON:0000483!8.98e-11!309;UBERON:0002420!1.35e-10!9;UBERON:0007245!1.35e-10!9;UBERON:0010009!1.35e-10!9;UBERON:0010011!1.35e-10!9;UBERON:0000454!1.35e-10!9;UBERON:0000119!2.07e-10!312;UBERON:0002308!2.30e-10!9;UBERON:0000125!2.30e-10!9;UBERON:0000487!1.08e-09!22;UBERON:0004732!1.30e-09!13;UBERON:0000468!3.70e-09!659;UBERON:0004733!8.19e-09!12;UBERON:0002028!8.19e-09!12;UBERON:0007277!8.19e-09!12;UBERON:0009663!1.40e-08!7;UBERON:0001871!2.31e-08!7;UBERON:0000922!2.32e-08!612;UBERON:0000467!4.56e-08!625;UBERON:0000480!5.50e-08!626;UBERON:0000064!5.69e-08!219;UBERON:0006914!5.99e-08!25;UBERON:0001894!2.65e-07!7;UBERON:0006222!2.65e-07!7;UBERON:0000200!2.73e-07!6;UBERON:0000349!6.48e-07!5;UBERON:0002298!9.93e-07!8 | |ontology_enrichment_uberon=UBERON:0007023!5.37e-59!115;UBERON:0001017!1.90e-50!82;UBERON:0005743!1.85e-48!86;UBERON:0001049!2.17e-46!57;UBERON:0005068!2.17e-46!57;UBERON:0006241!2.17e-46!57;UBERON:0007135!2.17e-46!57;UBERON:0000073!4.96e-43!94;UBERON:0001016!4.96e-43!94;UBERON:0000955!1.74e-38!69;UBERON:0006238!1.74e-38!69;UBERON:0002616!3.41e-38!59;UBERON:0002780!4.89e-37!41;UBERON:0001890!4.89e-37!41;UBERON:0006240!4.89e-37!41;UBERON:0003080!8.47e-36!42;UBERON:0003075!3.57e-33!86;UBERON:0007284!3.57e-33!86;UBERON:0001893!4.55e-31!34;UBERON:0002346!9.87e-31!90;UBERON:0002020!1.11e-30!34;UBERON:0003528!1.11e-30!34;UBERON:0002791!6.16e-30!33;UBERON:0001869!2.46e-29!32;UBERON:0004111!4.87e-23!241;UBERON:0004121!4.87e-23!169;UBERON:0003056!2.57e-22!61;UBERON:0000924!6.71e-22!173;UBERON:0006601!6.71e-22!173;UBERON:0000956!8.83e-22!25;UBERON:0000203!8.83e-22!25;UBERON:0002619!2.39e-21!22;UBERON:0000025!4.44e-21!194;UBERON:0000153!1.00e-20!129;UBERON:0007811!1.00e-20!129;UBERON:0000033!3.82e-20!123;UBERON:0001950!3.41e-19!20;UBERON:0000477!8.16e-18!286;UBERON:0001986!5.36e-13!18;UBERON:0004638!5.36e-13!18;UBERON:0004852!5.36e-13!18;UBERON:0003076!1.88e-11!15;UBERON:0003057!1.88e-11!15;UBERON:0000483!8.98e-11!309;UBERON:0002420!1.35e-10!9;UBERON:0007245!1.35e-10!9;UBERON:0010009!1.35e-10!9;UBERON:0010011!1.35e-10!9;UBERON:0000454!1.35e-10!9;UBERON:0000119!2.07e-10!312;UBERON:0002308!2.30e-10!9;UBERON:0000125!2.30e-10!9;UBERON:0000487!1.08e-09!22;UBERON:0004732!1.30e-09!13;UBERON:0000468!3.70e-09!659;UBERON:0004733!8.19e-09!12;UBERON:0002028!8.19e-09!12;UBERON:0007277!8.19e-09!12;UBERON:0009663!1.40e-08!7;UBERON:0001871!2.31e-08!7;UBERON:0000922!2.32e-08!612;UBERON:0000467!4.56e-08!625;UBERON:0000480!5.50e-08!626;UBERON:0000064!5.69e-08!219;UBERON:0006914!5.99e-08!25;UBERON:0001894!2.65e-07!7;UBERON:0006222!2.65e-07!7;UBERON:0000200!2.73e-07!6;UBERON:0000349!6.48e-07!5;UBERON:0002298!9.93e-07!8 | ||
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| ||
|short_description=p4@PREX2 | |short_description=p4@PREX2 | ||
}} | }} |
Latest revision as of 22:39, 18 September 2015
Short description: | p4@PREX2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_PREX2_5end |
Coexpression cluster: | C1544_caudate_globus_optic_locus_spinal_hippocampus_thalamus |
Association with transcript: | -90bp_to_ENST00000529398, NM_024870, NM_025170, uc003xxu.1, uc003xxv.1, uc011lez.1_5end |
EntrezGene: | PREX2 |
HGNC: | 22950 |
UniProt: | Q70Z35 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 1.64e-10 | 24 |
endothelial cell | 1.83e-08 | 36 |
neuronal stem cell | 3.02e-08 | 8 |