FFCP PHASE1:Hg19::chr11:67183141..67183159,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57571 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29268 | |||
|TSSclassifier=strong | |||
|UniProt=A5YM72,E9PK38,B4DHZ3,F5H2B1,B4DFC6,F5H427 | |||
|association_with_transcript=0bp_to_ENST00000307823,ENST00000423745,ENST00000531040,ENST00000531958,ENST00000539452,ENST00000542831,NM_001166222,NM_020811,uc009yrp.2,uc010rpq.1,uc010rpr.1_5end | |||
|cluster_id=chr11:67183141..67183159,+ | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_1_at_CARNS1_5end | |||
|id=chr11:67183141..67183159,+ | |||
|ontology_enrichment_celltype=CL:0000791!1.43e-07!18;CL:0000789!1.43e-07!18;CL:0002420!1.43e-07!18;CL:0002419!1.43e-07!18;CL:0000790!1.43e-07!18;CL:0000838!5.38e-07!52 | |||
|ontology_enrichment_celltype_v019=CL:0000791;1.19e-09;18!CL:0000789;1.19e-09;18!CL:0002419;1.19e-09;18!CL:0000236;1.31e-09;13!CL:0000625;2.35e-09;11!CL:0000542;7.90e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,1.17e-11,52;CL:0000542,2.76e-11,53;CL:0000051,2.76e-11,53;CL:0000791,1.28e-09,18;CL:0000789,1.28e-09,18;CL:0002420,1.28e-09,18;CL:0002419,1.28e-09,18;CL:0000790,1.28e-09,18;CL:0000625,3.14e-09,11;CL:0000236,8.78e-09,14 | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.35e-12;82!CL:0000790;1.19e-09;18!CL:0000051;7.90e-07;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.46e-57!115;UBERON:0001049!3.13e-28!57;UBERON:0005068!3.13e-28!57;UBERON:0006241!3.13e-28!57;UBERON:0007135!3.13e-28!57;UBERON:0005743!4.75e-27!86;UBERON:0001017!4.82e-25!82;UBERON:0002616!9.20e-25!59;UBERON:0000073!8.81e-24!94;UBERON:0001016!8.81e-24!94;UBERON:0000955!1.40e-22!69;UBERON:0006238!1.40e-22!69;UBERON:0003075!1.44e-22!86;UBERON:0007284!1.44e-22!86;UBERON:0003080!1.67e-21!42;UBERON:0002346!2.11e-21!90;UBERON:0002780!3.56e-21!41;UBERON:0001890!3.56e-21!41;UBERON:0006240!3.56e-21!41;UBERON:0001893!2.00e-20!34;UBERON:0002020!2.11e-20!34;UBERON:0003528!2.11e-20!34;UBERON:0002791!1.34e-19!33;UBERON:0001869!1.09e-18!32;UBERON:0002619!6.15e-15!22;UBERON:0003056!1.27e-14!61;UBERON:0001950!1.92e-13!20;UBERON:0000153!2.07e-13!129;UBERON:0007811!2.07e-13!129;UBERON:0000956!3.36e-13!25;UBERON:0000203!3.36e-13!25;UBERON:0000033!5.74e-12!123;UBERON:0004121!1.29e-09!169;UBERON:0000924!2.61e-09!173;UBERON:0006601!2.61e-09!173;UBERON:0002308!4.61e-09!9;UBERON:0000125!4.61e-09!9;UBERON:0002420!7.55e-09!9;UBERON:0007245!7.55e-09!9;UBERON:0010009!7.55e-09!9;UBERON:0010011!7.55e-09!9;UBERON:0000454!7.55e-09!9;UBERON:0003076!7.15e-08!15;UBERON:0003057!7.15e-08!15;UBERON:0002298!8.39e-08!8;UBERON:0009663!2.38e-07!7;UBERON:0001871!4.85e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;2.68e-26;34!UBERON:0003528;9.90e-26;34!UBERON:0002020;9.90e-26;34!UBERON:0002791;4.34e-25;32!UBERON:0001869;5.03e-25;32!UBERON:0002619;1.87e-22;22!UBERON:0002780;8.20e-22;41!UBERON:0001890;8.20e-22;41!UBERON:0000073;2.91e-21;53!UBERON:0002616;2.91e-21;53!UBERON:0001950;5.02e-20;20!UBERON:0000956;4.99e-19;25!UBERON:0000203;4.99e-19;25!UBERON:0001017;7.91e-15;75!UBERON:0007023;1.31e-14;114!UBERON:0000955;5.30e-14;68!UBERON:0000125;8.86e-14;9!UBERON:0002308;8.86e-14;9!UBERON:0002420;1.98e-13;9!UBERON:0007245;1.98e-13;9!UBERON:0010009;1.98e-13;9!UBERON:0010011;1.98e-13;9!UBERON:0000454;1.98e-13;9!UBERON:0001016;1.83e-12;83!UBERON:0009663;5.37e-11;7!UBERON:0004732;1.26e-10;13!UBERON:0002298;6.01e-10;6!UBERON:0000200;2.23e-09;6!UBERON:0004733;2.60e-09;12!UBERON:0002028;2.60e-09;12!UBERON:0000178;3.89e-09;15!UBERON:0000179;3.89e-09;15!UBERON:0000463;3.89e-09;15!UBERON:0000349;6.61e-08;5!UBERON:0001871;2.01e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,6.05e-59,114;UBERON:0001049,1.90e-42,56;UBERON:0005068,1.90e-42,56;UBERON:0006241,1.90e-42,56;UBERON:0007135,1.90e-42,56;UBERON:0000073,1.44e-38,53;UBERON:0002616,1.44e-38,53;UBERON:0003075,1.50e-33,82;UBERON:0007284,1.50e-33,82;UBERON:0001017,1.43e-32,81;UBERON:0002346,1.62e-32,86;UBERON:0000955,3.76e-31,68;UBERON:0006238,3.76e-31,68;UBERON:0001893,1.13e-30,34;UBERON:0003528,1.22e-30,34;UBERON:0002020,1.22e-30,34;UBERON:0002780,2.51e-30,41;UBERON:0001890,2.51e-30,41;UBERON:0003080,2.51e-30,41;UBERON:0006240,2.51e-30,41;UBERON:0001016,3.25e-29,89;UBERON:0002791,6.18e-28,32;UBERON:0001869,7.15e-28,32;UBERON:0010314,1.94e-23,132;UBERON:0003056,3.27e-23,61;UBERON:0010371,9.47e-23,104;UBERON:0002619,1.84e-22,22;UBERON:0001950,4.90e-20,20;UBERON:0000956,4.92e-19,25;UBERON:0000203,4.92e-19,25;UBERON:0004121,5.96e-15,171;UBERON:0000924,5.96e-15,171;UBERON:0006601,5.96e-15,171;UBERON:0000125,9.03e-14,9;UBERON:0002308,9.03e-14,9;UBERON:0002420,2.01e-13,9;UBERON:0007245,2.01e-13,9;UBERON:0010009,2.01e-13,9;UBERON:0010011,2.01e-13,9;UBERON:0000454,2.01e-13,9;UBERON:0003076,5.40e-13,15;UBERON:0003057,5.40e-13,15;UBERON:0009663,5.46e-11,7;UBERON:0004732,1.25e-10,13;UBERON:0002298,6.01e-10,6;UBERON:0000200,2.23e-09,6;UBERON:0004733,2.58e-09,12;UBERON:0002028,2.58e-09,12;UBERON:0007277,2.58e-09,12;UBERON:0000178,3.70e-09,15;UBERON:0000179,3.70e-09,15;UBERON:0000463,3.70e-09,15;UBERON:0011216,1.95e-08,223;UBERON:0000349,6.69e-08,5;UBERON:0000025,1.16e-07,192;UBERON:0001871,1.93e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.247532705920093,0,0,0,0,0,0,0,0,0,0,0.502170558379211,0,0,0,0.393364276848904,1.53531759238885,0.464448369948228,0,0,0,0,0,0.880801318004542,0,2.4065333696417,3.25516306073778,0,0,0.257575567634187,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0,0.272906150057846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75996244461323,2.18455444504853,5.33705552318133,7.25441378363062,2.40237592221607,5.74752439954483,3.96626923670917,4.77026877267682,2.27685187643779,2.34894875748376,3.82273228125229,0,1.68152568894461,0,1.96709770113833,2.35806457649499,1.02800749499755,0.167186495390678,1.95553359980154,0.473447805734733,1.94826728407911,0.668462741311041,0.294605907474837,1.32920336750173,0.812411591295047,0.896639238079726,1.69077151827842,0.164437904603676,0,0.289803085735052,1.4828656316206,5.35081656179426,3.1360657141493,0,0.766440987203842,0.68725489096526,1.01207876807801,1.27426165729639,1.30216690771284,0,3.16207750063323,2.68771883424279,1.24930726552346,2.60454977248419,4.10563998460523,4.03213486449465,5.34880391567015,8.25499102131954,0,0,0,0.361439152384566,0,0.144846518960824,0.795285947051099,1.94653948121054,0,0,0,23.1178068253463,0,0,0,0.174129737299267,0.26591592103773,0,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0.354668382198357,0.560677600142307,0,0,0,0,0.163461903113459,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30648779579902,0.45071417671979,0,0.358779271377724,0,0,0.300091096084402,0,0.772921620136887,0.18611685633159,0.337552664482532,0,0.252433774244115,0,0,0,0,0,0,0,0,0.243947412259191,0,0.232387885739037,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47008711385542,0,0,3.54473944008842,0,0,0,0,0,0,0,0,0,0,0.231860809950154,0.117408694235822,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0.088048434013226,1.4512968087854,0,1.00993946741104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.714889968290738,0,0,0,0,0,6.63166629531089,0.871533458600294,10.3971910829339,0,0,0,0,0,0,0.579125226670317,0.410952645100767,0.358121926479791,0,8.07826116827902,12.075144192133,17.1979668614863,0.254094624222463,1.30139853857622,0,0.167516265334349,0,0,0,0,0.12269149171914,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0.0868836144680828,0.195801157462741,3.77457766191941,1.86091223510599,1.50999940573032,3.30855429190677,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0.116210378459959,0,0,0,0,0,0,0,0.231046011313244,0,0,0.422206515571503,0,0,0.215915916102139,0,0.541892875087706,0.501689773854853,0,0,0,1.09629938322967,0.784306353074702,1.28225062558195,3.60816110269676,2.92840555197873,0.309123034943167,0.183138929636687,0.577566499444116,0,0,0,0.870036464629098,0.154048617114644,0.614014698904518,1.92971201478343,0.214840489736547,0.725083469571143,1.61930592090592,7.74578710126615,0,0.192190067365106,0.255225424989168,0,0.464845549297286,1.25924938732256,0,0,0,0,0,0,0.372158369359667,0.316379424718726,0.38126038784765,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0.211107635297664,0,0,0,0,0,0,0.376575203107117,0,0,0,0.229723400206959,3.55213326462519,4.58782324285425,3.41788312304498,3.57347663186684,4.11362273086194,1.29694662238543,3.24018862342869,2.37937552888281,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166849141711909,0,0,0,0,0,0,0,1.02555725490326,0.606802608747567,0,0,0,0.296964680832639,0,29.8244294329889,31.6506186923654,0,0,0.422250816255987,5.18044769452781,2.21027132424918,0.251932747854276,0.20453736500431,0,1.24415835064723,0.179736702294654,0,0,0.493217028184668,2.3948309234694,0,113.411931293141,90.7272000022905,1.99613798001194,0,0,0.724999575434793,0.1137934482855,0.508507300585533,0,0.344743373241465,0,0.347249989866585,46.0585520623196,21.3455696366972,9.15490417902499,5.52896299656123,20.6883333267483,14.6988216093162,0,0,0.769502585037971,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0.476809736941136,0,0,0,0,0,0.353830258013357,1.22206028986725,0,0,0,498.970587455952,26.48506236086,145.712485241161,0,0,0.242780379534093,0.394584402849391,2.41981432097328,0.61214552326098,2.40109002588254,0,0,0,0,0,0,0,0,0,0,0,4.36816670605075,0,0,0.146178634172371,0.0821154570532092,0.387956065953678,0,0.451961481561065,0,0,91.6740325441124,0,0,3.84215390530835,0.19980960958213,0.144090417154106,0.114536596165916,0,0,0.248505071130865,0,0.135904206073614,0,0,0,150.105072177447,154.839983526844,0,2.57859264851974,0,1.39641200636127,6.18733144831546,0.717873024576814,0.998395002494955,0.858452096273142,3.12440040418622,1.94832070211506,0,0,0,0,0,0,0,24.6521203840884,41.1334286456958,0,0.137539436597234,0.415440338029185,0,0,78.9744236554321,0,0.0788057072991982,1.15400093896996,0,0,0,1.42939065274673,1.32418394073086,0,0,0,0,0,0,0.340776043570843,0.226624183040251,0.146552233678082,0,181.254704818894,98.9099861035321,0,0,0.106787412567695,0.471612915298998,0.828478110694391,1.48849806543585,0,0,0,0,0,0,0,0,22.1517044991746,48.9325322256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| |||
|short_description=p1@CARNS1 | |||
}} |
Latest revision as of 17:57, 19 September 2015
Short description: | p1@CARNS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CARNS1_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | 0bp_to_ENST00000307823, ENST00000423745, ENST00000531040, ENST00000531958, ENST00000539452, ENST00000542831, NM_001166222, NM_020811, uc009yrp.2, uc010rpq.1, uc010rpr.1_5end |
EntrezGene: | CARNS1 |
HGNC: | 29268 |
UniProt: | A5YM72E9PK38B4DHZ3F5H2B1B4DFC6F5H427 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 1.17e-11 | 52 |
lymphocyte | 2.76e-11 | 53 |
common lymphoid progenitor | 2.76e-11 | 53 |
mature alpha-beta T cell | 1.28e-09 | 18 |
alpha-beta T cell | 1.28e-09 | 18 |
immature T cell | 1.28e-09 | 18 |
mature T cell | 1.28e-09 | 18 |
immature alpha-beta T cell | 1.28e-09 | 18 |
CD8-positive, alpha-beta T cell | 3.14e-09 | 11 |
B cell | 8.78e-09 | 14 |