FFCP PHASE1:Hg19::chr14:63671393..63671437,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57381 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=688 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000557133_5end | |||
|cluster_id=chr14:63671393..63671437,+ | |||
|coexpression_cluster_id=C1376 | |||
|description=CAGE_peak_2_at_RHOJ_5end | |||
|id=chr14:63671393..63671437,+ | |||
|ontology_enrichment_celltype=CL:0002139!5.82e-21!24;CL:0000222!4.42e-20!119;CL:0000115!1.10e-19!35;CL:0000359!1.99e-19!32;CL:0000071!5.09e-16!18;CL:0002546!5.09e-16!18;CL:0000192!8.50e-15!42;CL:0000514!8.50e-15!42;CL:0002078!1.05e-14!44;CL:0000183!5.53e-14!59;CL:0000187!3.19e-13!54;CL:0000680!3.54e-12!57;CL:0000056!3.54e-12!57;CL:0000355!3.54e-12!57;CL:0000055!7.34e-12!180;CL:0000393!5.60e-11!60;CL:0000211!5.60e-11!60;CL:0000213!2.99e-09!57;CL:0000215!2.99e-09!57;CL:1000413!7.15e-09!9;CL:0002539!2.79e-08!10;CL:0002494!2.58e-07!16 | |||
|ontology_enrichment_celltype_v019=CL:0002139;4.05e-32;24!CL:0000115;1.19e-25;36!CL:0000071;2.47e-24;18!CL:0000359;6.21e-24;32!CL:0002078;3.10e-14;45!CL:1000413;4.49e-13;9!CL:0002539;4.56e-12;10!CL:0000192;5.85e-12;43!CL:0000213;4.54e-10;58!CL:0000215;4.54e-10;58!CL:0002494;4.90e-10;16!CL:0002138;2.58e-09;6!CL:0002544;2.67e-09;6!CL:0002543;5.61e-09;6!CL:0002595;5.28e-07;5!CL:0002548;5.62e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,3.99e-32,24;CL:0000115,2.64e-30,36;CL:0000222,1.53e-26,121;CL:0000359,5.63e-25,32;CL:0000071,2.54e-24,18;CL:0002546,2.54e-24,18;CL:0002078,7.63e-22,45;CL:0000192,4.85e-16,43;CL:0000514,4.85e-16,43;CL:0000213,1.76e-15,58;CL:0000215,1.76e-15,58;CL:0000187,2.21e-13,55;CL:1000413,4.61e-13,9;CL:0000680,3.48e-12,58;CL:0000056,3.48e-12,58;CL:0000355,3.48e-12,58;CL:0002539,3.91e-12,10;CL:0002321,1.50e-11,250;CL:0000393,4.08e-11,61;CL:0000211,4.08e-11,61;CL:0002494,4.13e-10,16;CL:0005020,2.47e-09,6;CL:0002138,2.47e-09,6;CL:0005022,2.47e-09,6;CL:0002544,2.71e-09,6;CL:0002543,5.50e-09,6;CL:0002548,3.46e-07,6;CL:0002595,4.12e-07,5 | |||
|ontology_enrichment_development_v019=CL:0002546;2.47e-24;18!CL:0000514;5.85e-12;43!CL:0005022;2.58e-09;6!CL:0000222;1.82e-07;121 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0001637;4.41e-31;42!UBERON:0003509;4.41e-31;42!UBERON:0004572;4.41e-31;42!UBERON:0004573;6.28e-30;33!UBERON:0004571;6.28e-30;33!UBERON:0007500;1.02e-28;56!UBERON:0001981;1.02e-28;56!UBERON:0004537;1.02e-28;56!UBERON:0000055;1.35e-26;65!UBERON:0002049;1.18e-25;75!UBERON:0007798;1.18e-25;75!UBERON:0004638;2.47e-24;18!UBERON:0001986;2.47e-24;18!UBERON:0004852;2.47e-24;18!UBERON:0000947;4.95e-22;21!UBERON:0010191;4.95e-22;21!UBERON:0000487;1.97e-20;22!UBERON:0003914;9.21e-18;74!UBERON:0006914;4.17e-17;25!UBERON:0004535;3.24e-16;109!UBERON:0001009;1.78e-14;112!UBERON:0000490;3.99e-14;33!UBERON:0003915;4.49e-13;9!UBERON:0004700;4.49e-13;9!UBERON:0001917;4.49e-13;9!UBERON:0004237;4.56e-12;10!UBERON:0004695;4.56e-12;10!UBERON:0002111;4.56e-12;10!UBERON:0004178;4.56e-12;10!UBERON:0000948;6.91e-11;22!UBERON:0000025;4.45e-10;93!UBERON:0003513;2.14e-09;7!UBERON:0007100;5.27e-09;25!UBERON:0001135;2.14e-08;15!UBERON:0003834;5.28e-07;5!UBERON:0001533;5.28e-07;5 | |||
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| |||
|short_description=p2@RHOJ | |||
}} |
Latest revision as of 00:04, 25 September 2015
Short description: | p2@RHOJ |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_RHOJ_5end |
Coexpression cluster: | C1376_Endothelial_adipose_Lymphatic_Aortic_Smooth_breast_Hepatic |
Association with transcript: | 0bp_to_ENST00000557133_5end |
EntrezGene: | RHOJ |
HGNC: | 688 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 3.99e-32 | 24 |
endothelial cell | 2.64e-30 | 36 |
mesodermal cell | 1.53e-26 | 121 |
vascular associated smooth muscle cell | 5.63e-25 | 32 |
blood vessel endothelial cell | 2.54e-24 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.54e-24 | 18 |
meso-epithelial cell | 7.63e-22 | 45 |
smooth muscle cell | 4.85e-16 | 43 |
smooth muscle myoblast | 4.85e-16 | 43 |
lining cell | 1.76e-15 | 58 |
barrier cell | 1.76e-15 | 58 |
muscle cell | 2.21e-13 | 55 |
endothelial cell of artery | 4.61e-13 | 9 |
muscle precursor cell | 3.48e-12 | 58 |
myoblast | 3.48e-12 | 58 |
multi-potent skeletal muscle stem cell | 3.48e-12 | 58 |
aortic smooth muscle cell | 3.91e-12 | 10 |
embryonic cell | 1.50e-11 | 250 |
electrically responsive cell | 4.08e-11 | 61 |
electrically active cell | 4.08e-11 | 61 |
cardiocyte | 4.13e-10 | 16 |
lymphangioblast | 2.47e-09 | 6 |
endothelial cell of lymphatic vessel | 2.47e-09 | 6 |
vascular lymphangioblast | 2.47e-09 | 6 |
aortic endothelial cell | 2.71e-09 | 6 |
vein endothelial cell | 5.50e-09 | 6 |
cardiac fibroblast | 3.46e-07 | 6 |
smooth muscle cell of the subclavian artery | 4.12e-07 | 5 |