FF:11810-124E1: Difference between revisions

Latest revision as of 18:21, 4 June 2020

Name:	neurospheres - enteric neuron derived, biol_rep1
Species:	Mouse (Mus musculus)
Library ID:	CNhs13087
Sample type:	primary cells
Genomic View:	UCSC
CAGEd-oPOSSUM:	link
ZENBU report :	link

Additional information

Sample information

strain	NA
tissue	ANATOMICAL SYSTEM
dev stage	NA
sex	NA
age	NA
cell type	NA
cell line	NA
company	NA
collaboration	Hideki Enomoto (RIKEN CDB)
External link for information	[{{{sample_info_link}}} {{{sample_info_link}}}]

RNA information

lot number	EN1
catalog number	NA
sample type	total RNA
extraction protocol (Details)	OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0

CAGE Accession numbers

Method		Sample accession id
CAGE		SAMD00005149

Library accession numbers

Library id		Method		Exp. accession id		Run accession id
CNhs13087		CAGE		DRX008862		DRR009734

Accession ID Mm9

Library id		BAM		CTSS
CNhs13087		DRZ001159		DRZ002544

Accession ID Mm10

Library id		BAM		CTSS
CNhs13087		DRZ012509		DRZ013894

Download raw sequence, BAM & CTSS

Mm9

Fasta	BAM	CTSS
download	download	donwload

Mm10

BAM	CTSS
download	donwload

Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.

Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. Analyst:NA link to dataset. data

CNhs13087

0	0
1	0.0166
10	0
100	0
1000	-0.0121
1001	-0.0749
1002	-0.0644
1003	-0.089
1004	0
1005	-0.0219
1006	-0.071
1007	-0.194
1008	0
1009	-0.0572
101	0.0135
1010	0
1011	-0.215
1012	0
1013	-0.0031
1014	0.119
1015	0.159
1016	0.354
1017	0
1018	0
1019	0
102	0
1020	0.289
1021	0.119
1022	-0.251
1023	0
1024	-0.188
1025	-0.0417
1026	0
1027	0.619
1028	0
1029	-0.1
103	-0.0528
1030	0
1031	0.369
1032	-0.0575
1033	0.0488
1034	0
1035	0
1036	0.0451
1037	0
1038	0.0127
1039	-0.151
104	0
1040	0.0916
1041	0

Repeat families with enriched expression in this sampleSummary:Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed. Analyst:NA link to dataset. data

TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifsSummary:Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression Analyst: Michiel de Hoon link to dataset. data

library id: CNhs13087

Jaspar motif	Logo	P-value
MA0002.2	MA0002.2	4.33091e-5
MA0003.1	MA0003.1	0.0151
MA0004.1	MA0004.1	0.65
MA0006.1	MA0006.1	0.407
MA0007.1	MA0007.1	0.457
MA0009.1	MA0009.1	0.0294
MA0014.1	MA0014.1	0.828
MA0017.1	MA0017.1	6.14993e-5
MA0018.2	MA0018.2	0.00683
MA0019.1	MA0019.1	0.15
MA0024.1	MA0024.1	7.07538e-4
MA0025.1	MA0025.1	0.277
MA0027.1	MA0027.1	0.19
MA0028.1	MA0028.1	0.388
MA0029.1	MA0029.1	0.321
MA0030.1	MA0030.1	0.274
MA0031.1	MA0031.1	0.0581
MA0035.2	MA0035.2	0.00337
MA0038.1	MA0038.1	0.0266
MA0039.2	MA0039.2	0.125
MA0040.1	MA0040.1	0.803
MA0041.1	MA0041.1	0.572
MA0042.1	MA0042.1	0.532
MA0043.1	MA0043.1	0.112
MA0046.1	MA0046.1	1.21583e-9
MA0047.2	MA0047.2	0.00126
MA0048.1	MA0048.1	0.997
MA0050.1	MA0050.1	0.00783
MA0051.1	MA0051.1	0.0277
MA0052.1	MA0052.1	1.10125e-5
MA0055.1	MA0055.1	0.645
MA0057.1	MA0057.1	0.129
MA0058.1	MA0058.1	0.325
MA0059.1	MA0059.1	0.756
MA0060.1	MA0060.1	7.36756e-7
MA0061.1	MA0061.1	0.0457
MA0062.2	MA0062.2	0.993
MA0065.2	MA0065.2	1.81272e-5
MA0066.1	MA0066.1	0.322
MA0067.1	MA0067.1	0.625
MA0068.1	MA0068.1	0.0237
MA0069.1	MA0069.1	0.377
MA0070.1	MA0070.1	0.0952
MA0071.1	MA0071.1	0.409
MA0072.1	MA0072.1	0.457
MA0073.1	MA0073.1	0.876
MA0074.1	MA0074.1	0.762
MA0076.1	MA0076.1	0.282
MA0077.1	MA0077.1	0.0333
MA0078.1	MA0078.1	0.256
MA0079.2	MA0079.2	0.955
MA0080.2	MA0080.2	4.13058e-10
MA0081.1	MA0081.1	0.611
MA0083.1	MA0083.1	0.74
MA0084.1	MA0084.1	0.461
MA0087.1	MA0087.1	0.637
MA0088.1	MA0088.1	0.99
MA0090.1	MA0090.1	0.975
MA0091.1	MA0091.1	0.922
MA0092.1	MA0092.1	0.973
MA0093.1	MA0093.1	0.568
MA0099.2	MA0099.2	0.0745
MA0100.1	MA0100.1	0.492
MA0101.1	MA0101.1	0.346
MA0102.2	MA0102.2	0.583
MA0103.1	MA0103.1	5.91639e-4
MA0104.2	MA0104.2	0.714
MA0105.1	MA0105.1	7.31107e-4
MA0106.1	MA0106.1	0.225
MA0107.1	MA0107.1	0.153
MA0108.2	MA0108.2	0.119
MA0111.1	MA0111.1	0.829
MA0112.2	MA0112.2	7.37614e-6
MA0113.1	MA0113.1	0.182
MA0114.1	MA0114.1	2.16519e-4
MA0115.1	MA0115.1	0.0182
MA0116.1	MA0116.1	0.00114
MA0117.1	MA0117.1	0.768
MA0119.1	MA0119.1	0.0865
MA0122.1	MA0122.1	0.813
MA0124.1	MA0124.1	0.773
MA0125.1	MA0125.1	0.324
MA0131.1	MA0131.1	0.402
MA0135.1	MA0135.1	0.143
MA0136.1	MA0136.1	4.15299e-6
MA0137.2	MA0137.2	0.687
MA0138.2	MA0138.2	0.115
MA0139.1	MA0139.1	0.0959
MA0140.1	MA0140.1	1.44815e-4
MA0141.1	MA0141.1	0.0118
MA0142.1	MA0142.1	0.0685
MA0143.1	MA0143.1	0.215
MA0144.1	MA0144.1	0.333
MA0145.1	MA0145.1	0.0429
MA0146.1	MA0146.1	0.408
MA0147.1	MA0147.1	0.99
MA0148.1	MA0148.1	0.00469
MA0149.1	MA0149.1	0.468
MA0150.1	MA0150.1	0.0815
MA0152.1	MA0152.1	0.229
MA0153.1	MA0153.1	8.21048e-10
MA0154.1	MA0154.1	0.00522
MA0155.1	MA0155.1	0.428
MA0156.1	MA0156.1	0.00115
MA0157.1	MA0157.1	0.0359
MA0159.1	MA0159.1	0.155
MA0160.1	MA0160.1	0.066
MA0162.1	MA0162.1	0.348
MA0163.1	MA0163.1	0.00411
MA0164.1	MA0164.1	0.573
MA0258.1	MA0258.1	0.00873
MA0259.1	MA0259.1	0.642

FANTOM5 phase1 novel unique motifsSummary:Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above Analyst: Michiel de Hoon link to dataset. data

library id: CNhs13087

Novel motif	Logo	P-value
1	1	0.168
10	10	0.095
100	100	0.676
101	101	0.569
102	102	0.613
103	103	0.194
104	104	0.878
105	105	0.0408
106	106	0.0327
107	107	0.0606
108	108	0.861
109	109	0.0826
11	11	0.178
110	110	0.182
111	111	0.00579
112	112	0.026
113	113	0.405
114	114	0.0307
115	115	0.397
116	116	0.632
117	117	0.5
118	118	0.447
119	119	0.0527
12	12	0.605
120	120	0.538
121	121	0.0737
122	122	0.21
123	123	0.315
124	124	0.297
125	125	0.665
126	126	0.621
127	127	0.091
128	128	0.0231
129	129	0.212
13	13	0.0539
130	130	0.769
131	131	0.856
132	132	0.353
133	133	0.7
134	134	0.969
135	135	0.768
136	136	0.904
137	137	0.522
138	138	0.596
139	139	0.0741
14	14	0.348
140	140	0.00323
141	141	0.204
142	142	0.703
143	143	0.757
144	144	0.773
145	145	0.47
146	146	0.552
147	147	0.794
148	148	0.342
149	149	0.107
15	15	0.127
150	150	0.416
151	151	0.295
152	152	0.101
153	153	0.898
154	154	0.719
155	155	0.874
156	156	4.36168e-12
157	157	0.53
158	158	0.346
159	159	0.0306
160	160	0.0972
161	161	0.315
162	162	0.758
163	163	0.9
164	164	0.12
165	165	0.116
166	166	0.837
167	167	0.536
168	168	0.462
169	169	0.0157
17	17	0.0409
18	18	0.713
19	19	0.176
2	2	0.371
20	20	0.814
21	21	0.269
22	22	0.314
23	23	0.203
24	24	0.193
25	25	0.471
26	26	0.0719
27	27	0.29
28	28	0.271
29	29	0.718
3	3	0.157
30	30	0.454
31	31	0.674
32	32	0.0592
33	33	0.658
34	34	0.367
35	35	0.965
36	36	0.994
37	37	0.0663
38	38	0.259
39	39	0.498
4	4	0.54
40	40	0.606
41	41	0.582
42	42	0.368
43	43	0.194
44	44	0.163
45	45	0.251
46	46	0.272
47	47	0.242
48	48	0.161
49	49	0.144
5	5	0.255
50	50	0.607
51	51	0.587
52	52	0.331
53	53	0.295
54	54	0.477
55	55	0.938
56	56	0.577
57	57	0.706
58	58	0.115
59	59	0.0273
6	6	0.701
60	60	0.0855
61	61	0.317
62	62	0.0604
63	63	0.101
64	64	0.522
65	65	0.146
66	66	0.41
67	67	0.747
68	68	0.453
69	69	0.865
7	7	0.123
70	70	0.00144
71	71	0.176
72	72	0.309
73	73	0.217
74	74	0.84
75	75	0.197
76	76	0.976
77	77	0.176
78	78	0.0617
79	79	0.176
8	8	0.246
80	80	0.537
81	81	0.628
82	82	0.0121
83	83	0.273
84	84	0.4
85	85	0.131
86	86	0.241
87	87	0.436
88	88	0.618
89	89	0.0831
9	9	0.406
90	90	0.844
91	91	0.408
92	92	0.153
93	93	0.565
94	94	0.521
95	95	0.238
96	96	0.661
97	97	0.499
98	98	0.0896
99	99	0.292

de novo motifs identified by HOMER in promoters active in this sampleSummary:The result of HOMER in this sample is shown. Analyst:NA library id: CNhs13087

FANTOM5 (FF) ontology

Direct parent terms

is_a relathionship
EFO:0002091 biological replicate
FF:0011142 mouse neurospheres - enteric neuron derived sample

part_of relathionship
UBERON:0002005 enteric nervous system

Ancestor terms (non development)Summary:Connected ontology terms with is_a, part_of or located_in relationship Analyst: Hideya Kawaji link to source data data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000540 (neuron)
0000003 (native cell)
0000548 (animal cell)
0002371 (somatic cell)
0002319 (neural cell)
0000393 (electrically responsive cell)
0000211 (electrically active cell)
0000404 (electrically signaling cell)
0000255 (eukaryotic cell)
0000107 (autonomic neuron)

UBERON: Anatomy
0000468 (multi-cellular organism)
0004121 (ectoderm-derived structure)
0010314 (structure with developmental contribution from neural crest)
0011216 (organ system subdivision)
0002410 (autonomic nervous system)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000477 (anatomical cluster)
0000467 (anatomical system)
0010313 (neural crest-derived structure)
0001062 (anatomical entity)
0000480 (anatomical group)
0010317 (germ layer / neural crest derived structure)
0000010 (peripheral nervous system)
0002005 (enteric nervous system)
0001016 (nervous system)

FF: FANTOM5
0000102 (sample by type)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000103 (mouse sample)
0000001 (sample)
0000350 (experimentally modified sample)
0011142 (mouse neurospheres - enteric neuron derived sample)

Ancestor terms (development)Summary:Connected ontology terms with develops_from, derives_from or preceded_by relationship Analyst: Hideya Kawaji link to source data data
CL:0000133 (neurectodermal cell)
CL:0000031 (neuroblast)
CL:0000221 (ectodermal cell)

@@ Line 1: / Line 1: @@
 {{f5samples
-|DRA_sample_Accession=CAGE@DRS008752
+|DRA_sample_Accession=CAGE@SAMD00005149
-|accession_numbers=CAGE;DRX008862;DRR009734;DRZ001159;DRZ002544
+|accession_numbers=CAGE;DRX008862;DRR009734;DRZ001159;DRZ002544;DRZ012509;DRZ013894
 |ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0004121,UBERON:0010314,UBERON:0011216,UBERON:0002410,UBERON:0000061,UBERON:0000465,UBERON:0000477,UBERON:0000467,UBERON:0010313,UBERON:0001062,UBERON:0000480,UBERON:0010317,UBERON:0000010,UBERON:0002005,UBERON:0001016
 |ancestors_in_cell_lineage_facet=CL:0000000,CL:0000540,CL:0000003,CL:0000548,CL:0002371,CL:0002319,CL:0000393,CL:0000211,CL:0000404,CL:0000255,CL:0000107
@@ Line 9: / Line 9: @@
 |created_by=
 |creation_date=
-|data_phase=1
+|data_phase=2
-|datafreeze_phase=1
+|datafreeze_phase=2
 |def=
 |expression_enrichment_score=chr8:59799772..59799789,+!p1@Hand2!2.36!627.23!Hand2;;chr5:67490284..67490302,-!p1@Phox2b!2.00!98.12!Phox2b;;chr10:86956396..86956411,-!p1@Ascl1!1.96!136.93!Ascl1;;chr11:96164821..96164865,+!p1@Hoxb5!1.94!85.50!Hoxb5;;chr6:52154414..52154462,-!p1@Hoxa5!1.84!92.13!Hoxa5;;chr15:78994907..78994926,-!p1@Sox10!1.80!153.97!Sox10;;chr2:74583776..74583815,+!p3@Hoxd3!1.75!55.53!Hoxd3;;chr6:52154386..52154407,-!p2@Hoxa5!1.71!62.79!Hoxa5;;chr2:146047829..146047847,+!p1@Insm1!1.65!76.04!Insm1;;chr4:99322820..99322845,+!p1@Foxd3!1.57!45.75!Foxd3;;chr1:42752574..42752621,+!p@chr1:42752574..42752621,+!1.55!43.22!Pou3f3;;chr11:96160426..96160443,+!p2@Hoxb6!1.53!33.13!Hoxb6;;chr5:120120667..120120685,+!p3@Tbx3!1.50!58.05!Tbx3;;chr14:17407878..17407926,-!p1@Rarb!1.49!65.63!Rarb;;chr14:17407549..17407575,-!p3@Rarb!1.48!43.86!Rarb;;chr12:39510206..39510249,+!p3@Etv1!1.48!29.03!Etv1;;chr7:108966820..108966835,+!p1@Phox2a!1.48!29.03!Phox2a;;chr2:71384802..71384815,-!p1@Dlx2!1.43!31.87!Dlx2;;chr15:102865131..102865151,+!p2@Hoxc4!1.37!25.56!Hoxc4;;chr6:52158644..52158677,-!p2@Hoxa6!1.33!20.19!Hoxa6;;chr5:120121169..120121171,+!p4@Tbx3!1.32!35.34!Tbx3;;chr15:102865088..102865107,+!p1@Hoxc4!1.30!24.93!Hoxc4;;chr7:38557887..38557910,-!p5@Zfp536!1.30!18.93!Zfp536;;chr2:71367871..71367898,+!p1@Dlx1!1.26!17.35!Dlx1;;chr11:96164905..96164919,+!p2@Hoxb5!1.23!16.09!Hoxb5;;chr11:96160360..96160397,+!p3@Hoxb6!1.22!15.46!Hoxb6;;chr11:96143666..96143725,+!p1@Hoxb8!1.18!16.41!Hoxb8;;chr5:67490391..67490404,-!p3@Phox2b!1.16!13.57!Phox2b;;chr11:85646303..85646329,+!p1@Tbx2!1.14!83.61!Tbx2;;chr11:85646263..85646278,+!p2@Tbx2!1.14!32.50!Tbx2;;chr18:69752912..69752928,+!p9@Tcf4!1.14!19.25!Tcf4;;chr5:67490346..67490357,-!p4@Phox2b!1.14!12.94!Phox2b;;chr12:39510090..39510114,+!p6@Etv1!1.14!12.94!Etv1;;chr11:85646469..85646488,+!p5@Tbx2!1.13!18.93!Tbx2;;chr11:85646341..85646352,+!p3@Tbx2!1.11!23.35!Tbx2;;chr11:96145450..96145517,+!p2@Hoxb7!1.11!17.98!Hoxb7;;chrX:58146612..58146615,-!p1@Sox3!1.10!11.67!Sox3;;chr5:67490474..67490494,-!p2@Phox2b!1.10!11.67!Phox2b;;chr6:52114821..52114828,-!p1@Hoxa2!1.08!16.72!Hoxa2;;chr15:102865048..102865073,+!p3@Hoxc4!1.07!13.57!Hoxc4;;chr9:71743854..71743909,-!p1@Tcf12!1.06!83.29!Tcf12;;chr10:119913278..119913298,-!p2@Hmga2!1.06!23.66!Hmga2;;chr11:96213288..96213332,+!p@chr11:96213288..96213332,+!1.05!17.67!Hoxb2;;chr1:179374784..179374800,+!p2@Zfp238!1.05!11.99!Zfp238;;chr3:34548909..34548927,+!p1@Sox2!1.02!16.41!Sox2;;chr2:74565306..74565327,+!p2@Hoxd4!1.02!9.47!Hoxd4;;chr12:12948633..12948651,-!p1@Mycn!1.01!90.55!Mycn;;chr3:95032091..95032183,-!p1@Mllt11!1.01!80.77!Mllt11;;chr3:34548946..34548972,+!p2@Sox2!1.01!10.41!Sox2;;chr12:30213247..30213333,+!p1@Myt1l!1.01!9.15!Myt1l;;chr11:96160403..96160416,+!p4@Hoxb6!1.01!9.15!Hoxb6;;chr12:28027561..28027591,-!p1@Sox11!0.99!59.63!Sox11;;chr14:34791937..34791977,-!p1@Zfp488!0.99!8.83!Zfp488;;chr11:85646427..85646451,+!p4@Tbx2!0.98!15.14!Tbx2;;chr11:96160451..96160462,+!p5@Hoxb6!0.98!8.52!Hoxb6;;chr12:39510290..39510309,+!p5@Etv1!0.98!8.52!Etv1;;chr2:71384458..71384526,-!p2@Dlx2!0.96!8.20!Dlx2;;chr2:71367142..71367167,+!p2@Dlx1!0.92!7.26!Dlx1;;chr6:52141694..52141715,-!p1@Hoxa4!0.91!9.15!Hoxa4;;chr6:52134126..52134150,-!p3@Hoxa3!0.90!6.94!Hoxa3;;chr5:67490333..67490342,-!p5@Phox2b!0.90!6.94!Phox2b;;chr2:71384401..71384424,-!p3@Dlx2!0.90!6.94!Dlx2;;chr12:39507680..39507715,+!p2@Etv1!0.88!13.57!Etv1;;chr11:96213434..96213452,+!p@chr11:96213434..96213452,+!0.88!8.83!Hoxb2;;chr11:96143843..96143868,+!p3@Hoxb8!0.88!6.63!Hoxb8;;chr14:17407857..17407875,-!p4@Rarb!0.88!6.63!Rarb;;chr3:5218629..5218684,+!p1@Zfhx4!0.87!22.09!Zfhx4;;chr6:52158693..52158704,-!p3@Hoxa6!0.86!6.31!Hoxa6;;chr11:96143962..96144035,+!p2@Hoxb8!0.86!6.31!Hoxb8;;chr17:25707623..25707639,-!p1@Sox8!0.85!27.45!Sox8;;chr2:163028808..163028869,+!p1@Tox2!0.84!22.40!Tox2;;chr8:111227641..111227672,+!p@chr8:111227641..111227672,+!0.84!16.72!Zfhx3;;chr10:119914001..119914078,-!p4@Hmga2!0.84!8.20!Hmga2;;chr2:74583741..74583750,+!p10@Hoxd3!0.84!5.99!Hoxd3;;chr9:106356211..106356242,+!p1@Pcbp4!0.83!121.47!Pcbp4;;chr5:138199361..138199441,+!p2@Tsc22d4!0.82!11.04!Tsc22d4;;chr11:96180045..96180059,+!p1@Hoxb4!0.82!8.20!Hoxb4;;chr11:96213183..96213188,+!p@chr11:96213183..96213188,+!0.82!5.68!Hoxb2;;chr11:96164887..96164894,+!p4@Hoxb5!0.82!5.68!Hoxb5;;chr11:96213264..96213282,+!p@chr11:96213264..96213282,+!0.81!6.94!Hoxb2;;chr7:38558544..38558566,-!p4@Zfp536!0.81!6.31!Zfp536;;chr7:38554763..38554780,-!p1@Zfp536!0.80!10.10!Zfp536;;chr13:40826150..40826167,-!p3@Tfap2a!0.80!5.99!Tfap2a;;chr10:102491237..102491291,-!p2@Alx1!0.80!5.36!Alx1;;chr5:120121020..120121049,+!p1@Tbx3!0.79!33.76!Tbx3;;chr18:84255649..84255661,-!p4@Tshz1!0.79!14.51!Tshz1;;chr12:39507404..39507441,+!p4@Etv1!0.79!7.57!Etv1;;chr13:40829137..40829205,-!p1@Tfap2a!0.78!5.68!Tfap2a;;chr14:17407671..17407684,-!p7@Rarb!0.78!5.05!Rarb;;chr2:71384425..71384456,-!p4@Dlx2!0.78!5.05!Dlx2;;chr18:84255841..84255883,-!p1@Tshz1!0.77!37.23!Tshz1;;chr13:44936126..44936164,+!p6@Jarid2!0.77!5.68!Jarid2;;chr5:120121262..120121282,+!p6@Tbx3!0.76!5.36!Tbx3;;chr5:67490412..67490421,-!p6@Phox2b!0.76!4.73!Phox2b;;chr11:96180069..96180089,+!p3@Hoxb4!0.76!4.73!Hoxb4;;chr18:69752864..69752875,+!p25@Tcf4!0.76!4.73!Tcf4;;chr1:6724908..6724955,+!p2@St18!0.73!4.42!St18;;chr11:96145393..96145407,+!p3@Hoxb7!0.73!4.42!Hoxb7;;chr4:22415443..22415506,-!p1@Pou3f2!0.73!4.42!Pou3f2;;chr9:106356243..106356264,+!p2@Pcbp4!0.72!20.51!Pcbp4;;chr10:119913546..119913583,-!p3@Hmga2!0.72!9.47!Hmga2;;chr6:53523358..53523388,+!p1@Creb5!0.71!55.84!Creb5;;chr19:7342725..7342784,+!p1@Rcor2!0.71!18.93!Rcor2;;chr11:96147952..96147967,+!p1@Hoxb7!0.71!5.36!Hoxb7;;chr5:120121091..120121100,+!p7@Tbx3!0.71!5.05!Tbx3;;chr1:179374820..179374831,+!p3@Zfp238!0.71!4.10!Zfp238;;chr4:99322855..99322867,+!p2@Foxd3!0.71!4.10!Foxd3;;chr7:144506077..144506128,-!p1@Ebf3!0.70!10.10!Ebf3;;chr9:106356278..106356292,+!p3@Pcbp4!0.70!7.26!Pcbp4;;chr10:76424613..76424689,-!p1@Pcbp3!0.68!93.39!Pcbp3;;chr7:25292331..25292421,+!p1@Zfp428!0.68!30.92!Zfp428;;chr14:65568469..65568511,-!p2@Hmbox1!0.68!13.88!Hmbox1;;chr13:40825465..40825469,-!p2@Tfap2a!0.68!3.79!Tfap2a;;chr11:98826178..98826197,+!p7@Rara!0.68!3.79!Rara;;chr5:120120834..120120845,+!p8@Tbx3!0.68!3.79!Tbx3;;chr14:17407970..17408015,-!p2@Rarb!0.67!11.04!Rarb;;chr7:38558574..38558611,-!p2@Zfp536!0.67!4.73!Zfp536;;chr1:38684260..38684312,-!p2@Aff3!0.66!29.03!Aff3;;chr5:120121446..120121461,+!p2@Tbx3!0.66!13.25!Tbx3;;chr9:21420812..21420815,+!p6@Smarca4!0.66!5.68!Smarca4;;chr4:54960870..54960926,+!p1@Zfp462!0.65!14.20!Zfp462;;chr2:74565247..74565258,+!p3@Hoxd4!0.65!3.47!Hoxd4;;chr7:38554684..38554696,-!p10@Zfp536!0.65!3.47!Zfp536;;chr12:39510260..39510271,+!p10@Etv1!0.65!3.47!Etv1;;chr5:67490447..67490458,-!p7@Phox2b!0.65!3.47!Phox2b;;chr6:52133827..52133854,-!p2@Hoxa3!0.65!3.47!Hoxa3;;chr1:6720216..6720232,+!p1@St18!0.65!3.47!St18;;chr7:52471143..52471186,+!p1@Tead2!0.64!42.28!Tead2;;chr17:27693746..27693759,+!p6@Hmga1-rs1,p7@Hmga1!0.64!7.26!Hmga1;;chr10:114821393..114821431,-!p5@Thap2!0.63!10.10!Thap2;;chr9:96653072..96653154,-!p1@Zbtb38!0.63!9.78!Zbtb38;;chr2:154395581..154395610,-!p1@E2f1!0.62!38.81!E2f1;;chr10:119913310..119913366,-!p1@Hmga2!0.62!29.66!Hmga2;;chr18:3281034..3281104,-!p1@Crem!0.62!26.82!Crem;;chr2:74583733..74583738,+!p13@Hoxd3!0.62!3.16!Hoxd3;;chr11:74981654..74981658,-!p1@Hic1!0.61!14.20!Hic1;;chr13:22036953..22037009,+!p1@Zfp184!0.61!9.47!Zfp184;;chr7:116154364..116154444,+!p1@Tub!0.60!5.68!Tub;;chr3:32264530..32264544,-!p2@Zmat3!0.60!5.05!Zmat3;;chr6:52163319..52163342,-!p1@Hoxa3!0.60!4.73!Hoxa3;;chr6:47998855..47998863,-!p5@Zfp777!0.60!3.47!Zfp777;;chr3:32264565..32264613,-!p1@Zmat3!0.59!39.12!Zmat3;;chr14:52634234..52634281,-!p3@Zfp219!0.59!9.15!Zfp219;;chr14:52935788..52935817,-!p2@Sall2!0.59!7.26!Sall2;;chr11:3189683..3189744,+!p2@Patz1!0.59!6.63!Patz1;;chr9:63605740..63605771,-!p1@Smad3!0.58!49.85!Smad3;;chr13:15555670..15555771,+!p2@Gli3!0.58!8.20!Gli3;;chr1:92950099..92950109,+!p3@Lrrfip1!0.58!3.47!Lrrfip1;;chr14:34791987..34791998,-!p2@Zfp488!0.58!2.84!Zfp488;;chr2:81893535..81893548,+!p1@Zfp804a!0.58!2.84!Zfp804a;;chr6:83020355..83020371,-!p1@Tlx2!0.58!2.84!Tlx2;;chr1:92949999..92950097,+!p1@Lrrfip1!0.56!86.76!Lrrfip1;;chr11:98821749..98821799,+!p2@Rara!0.56!20.51!Rara;;chr4:54957910..54957954,+!p2@Zfp462!0.56!9.47!Zfp462;;chr15:75447162..75447217,+!p2@Zfp41!0.56!9.15!Zfp41;;chr17:37140628..37140631,+!p2@Zfp57!0.56!5.99!Zfp57;;chr7:130644017..130644092,-!p1@Zkscan2!0.55!5.68!Zkscan2;;chr7:122968213..122968266,-!p4@Sox6!0.55!3.16!Sox6;;chr7:38557752..38557793,-!p3@Zfp536!0.55!3.16!Zfp536;;chr11:33103563..33103583,-!p1@Tlx3!0.55!2.52!Tlx3;;chr11:96145362..96145389,+!p4@Hoxb7!0.55!2.52!Hoxb7;;chr11:87881569..87881633,+!p2@Vezf1!0.54!24.29!Vezf1;;chr7:25292141..25292158,+!p2@Zfp428!0.54!10.41!Zfp428;;chr7:91558392..91558434,-!p1@Arnt2!0.54!8.20!Arnt2;;chr3:90097275..90097302,+!p2@Gatad2b!0.54!6.63!Gatad2b;;chr10:119913792..119913820,-!p5@Hmga2!0.54!4.73!Hmga2;;chr1:9690398..9690410,-!p2@Mybl1!0.54!3.16!Mybl1;;chr2:163028888..163028905,+!p3@Tox2!0.54!3.16!Tox2;;chr4:150503457..150503498,-!p3@Camta1!0.54!2.84!Camta1;;chr12:3891810..3891829,+!p2@Dnmt3a!0.53!4.10!Dnmt3a;;chr5:120120981..120120992,+!p5@Tbx3!0.53!3.47!Tbx3;;chr12:39506873..39506913,+!p1@Etv1!0.52!30.92!Etv1;;chr7:134376558..134376587,+!p2@Zfp553!0.52!4.42!Zfp553;;chr2:156666727..156666753,+!p2@Tgif2!0.52!3.79!Tgif2;;chr4:128483534..128483613,-!p1@Zfp362!0.51!19.88!Zfp362;;chr18:69752638..69752665,+!p19@Tcf4!0.51!2.52!Tcf4;;chr19:5447886..5447905,+!p1@Fosl1!0.51!2.21!Fosl1;;chr4:22415290..22415307,-!p2@Pou3f2!0.51!2.21!Pou3f2;;chr4:99323046..99323073,+!p3@Foxd3!0.51!2.21!Foxd3;;chr2:71367855..71367864,+!p6@Dlx1!0.51!2.21!Dlx1;;chr11:96164868..96164875,+!p5@Hoxb5!0.51!2.21!Hoxb5;;chr5:120130377..120130432,+!p10@Tbx3!0.51!2.21!Tbx3;;chr7:138697803..138697813,+!p1@Hmx2!0.51!2.21!Hmx2;;chr10:79862089..79862129,-!p2@Mbd3!0.50!30.92!Mbd3;;chr15:102034446..102034506,+!p2@Zfp740!0.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3;;chr7:134592623..134592680,-!p1@Zfp689!0.25!5.68!Zfp689;;chr10:79896347..79896358,-!p2@Tcf3!0.25!5.05!Tcf3;;chr10:30523091..30523182,-!p4@Ncoa7!0.25!4.73!Ncoa7;;chr3:90097217..90097233,+!p3@Gatad2b!0.25!3.16!Gatad2b;;chr16:8672256..8672279,-!p1@Carhsp1,p1@Gm9791!0.25!2.84!Carhsp1;;chr14:55711114..55711159,-!p2@Zfhx2!0.25!2.84!Zfhx2;;chr6:38204214..38204267,-!p4@D630045J12Rik!0.25!2.21!D630045J12Rik;;chr15:88582079..88582091,+!p1@Gm15583,p1@Zbed4!0.25!1.89!Zbed4;;chr2:32219200..32219213,+!p5@Ciz1!0.25!1.26!Ciz1;;chr2:165213716..165213732,-!p2@Zfp334!0.25!1.26!Zfp334;;chr4:32325955..32325971,+!p3@Bach2!0.25!1.26!Bach2;;chr13:83663902..83663927,+!p1@Mef2c!0.24!37.23!Mef2c;;chr13:44826694..44826710,+!p3@Jarid2!0.24!16.41!Jarid2;;chr14:52935876..52935928,-!p1@Sall2!0.24!12.30!Sall2;;chr7:13063668..13063721,+!p1@Zfp606!0.24!10.41!Zfp606;;chr12:77470507..77470572,-!p2@Zbtb25!0.24!5.36!Zbtb25;;chr9:21875812..21875860,-!p1@Zfp653!0.24!3.79!Zfp653;;chr3:30500978..30501018,+!p1@Mynn!0.24!3.47!Mynn;;chrX:34443339..34443348,-!p2@Nkrf!0.24!3.47!Nkrf;;chr18:14130694..14130697,-!p2@Zfp521!0.24!2.84!Zfp521;;chr16:43363152..43363186,+!p3@Zbtb20!0.24!2.84!Zbtb20;;chr2:44972869..44972895,-!p12@Zeb2!0.24!2.21!Zeb2;;chr4:13712228..13712267,+!p3@Runx1t1!0.24!1.89!Runx1t1;;chr15:61818593..61818614,+!p4@Myc!0.24!1.89!Myc;;chr4:122911056..122911065,+!p2@Heyl!0.24!1.58!Heyl;;chr10:67375146..67375208,-!p2@Zfp365!0.24!1.58!Zfp365;;chr18:14131020..14131033,-!p4@Zfp521!0.24!1.26!Zfp521;;chr17:84587077..84587097,-!p4@Zfp36l2!0.24!1.26!Zfp36l2;;chr18:69504229..69504240,+!p16@Tcf4!0.24!1.26!Tcf4;;chr9:122812411..122812426,+!p@chr9:122812411..122812426,+!0.24!1.26!Gm8008;;chr18:69752598..69752607,+!p26@Tcf4!0.24!0.95!Tcf4;;chr6:128312812..128312821,+!p5@Foxm1!0.24!0.95!Foxm1;;chr16:30065419..30065437,+!p1@Hes1!0.23!81.40!Hes1;;chr6:47544966..47545046,-!p1@Ezh2!0.23!31.55!Ezh2;;chr2:181327438..181327495,-!p1@Znf512b!0.23!20.19!Znf512b;;chr8:72662999..72663031,-!p1@LOC100048268,p1@Rfxank!0.23!12.30!Rfxank;;chr7:77511234..77511302,-!p2@Nr2f2!0.23!9.47!Nr2f2;;chr2:162880327..162880385,+!p2@Mybl2!0.23!9.47!Mybl2;;chr15:75799717..75799742,+!p1@Zfp707!0.23!5.36!Zfp707;;chr19:41557591..41557634,+!p3@Lcor!0.23!3.16!Lcor;;chr2:153475178..153475196,+!p1@Dnmt3b!0.23!2.52!Dnmt3b;;chr1:64167811..64167826,-!p5@Klf7!0.23!2.52!Klf7;;chr13:67229127..67229153,+!p2@Zfp759!0.23!2.21!Zfp759;;chr13:96095124..96095144,+!p3@Zbed3!0.23!2.21!Zbed3;;chr8:111227493..111227517,+!p@chr8:111227493..111227517,+!0.23!1.89!Zfhx3;;chr4:97444339..97444350,+!p14@Nfia!0.23!1.89!Nfia;;chr5:134741947..134741948,-!p9@Gtf2i!0.23!1.58!Gtf2i;;chr6:47998938..47998955,-!p2@Zfp777!0.23!1.26!Zfp777;;chr4:149610794..149610876,+!p2@LOC100045967,p2@LOC100503183,p3@Eno1,p3@Gm5506!0.23!1.26!Eno1;;chr18:69753145..69753159,+!p14@Tcf4!0.23!1.26!Tcf4;;chr5:125659525..125659599,-!p1@Ncor2!0.22!91.18!Ncor2;;chr9:110034519..110034606,+!p1@Smarcc1!0.22!64.99!Smarcc1;;chr11:100800671..100800770,-!p1@Stat3!0.22!47.96!Stat3;;chr16:20141134..20141213,+!p1@Yeats2!0.22!38.81!Yeats2;;chr4:40216811..40216882,-!p1@Topors!0.22!27.76!Topors;;chr16:4594683..4594735,+!p2@Glis2!0.22!18.61!Glis2;;chr8:107694628..107694659,+!p1@Cbfb!0.22!12.62!Cbfb;;chr9:122832168..122832210,+!p1@Zfp105!0.22!11.04!Zfp105;;chr7:6238191..6238224,+!p1@Zfp667!0.22!8.20!Zfp667;;chr16:17530781..17530882,-!p2@Thap7!0.22!8.20!Thap7;;chr17:34784132..34784161,+!p1@Atf6b!0.22!7.89!Atf6b;;chr8:108583550..108583595,+!p2@Nfatc3!0.22!5.99!Nfatc3;;chrX:132420488..132420517,+!p4@Bhlhb9!0.22!5.68!Bhlhb9;;chr1:64167851..64167886,-!p3@Klf7!0.22!5.68!Klf7;;chr10:79896328..79896339,-!p3@Tcf3!0.22!4.42!Tcf3;;chr3:9610074..9610086,-!p2@Zfp704!0.22!2.84!Zfp704;;chr5:110539286..110539317,+!p2@Zfp605!0.22!2.84!Zfp605;;chr4:108151497..108151514,+!p3@Zcchc11!0.22!2.21!Zcchc11;;chr18:79306603..79306620,-!p4@Setbp1!0.22!1.58!Setbp1;;chr18:14131045..14131062,-!p3@Zfp521!0.22!1.58!Zfp521;;chr13:53076382..53076393,-!p2@Nfil3!0.22!1.58!Nfil3;;chr7:134758722..134758733,-!p2@Zfp629!0.22!1.58!Zfp629;;chr16:30065394..30065398,+!p3@Hes1!0.22!1.26!Hes1;;chr17:37139519..37139531,+!p5@Zfp57!0.22!0.95!Zfp57;;chr8:73905967..73905978,-!p4@Nr2f6!0.22!0.95!Nr2f6;;chr15:102237575..102237578,+!p7@Sp1!0.22!0.95!Sp1;;chr18:36953572..36953591,+!p1@Zmat2!0.21!85.19!Zmat2;;chr5:125343044..125343141,+!p1@Zfp664!0.21!63.73!Zfp664;;chr5:138558139..138558214,+!p1@Zscan21!0.21!40.07!Zscan21;;chr2:164860270..164860320,-!p1@Ncoa5!0.21!28.40!Ncoa5;;chr4:82151274..82151290,-!p3@Nfib!0.21!23.35!Nfib;;chr6:64992801..64992894,+!p2@Smarcad1!0.21!20.82!Smarcad1;;chr15:101097270..101097290,+!p1@Nr4a1!0.21!14.51!Nr4a1;;chr11:120494853..120494905,-!p1@Mafg!0.21!13.57!Mafg;;chr2:169458192..169458247,+!p1@Tshz2!0.21!12.30!Tshz2;;chr2:164860321..164860359,-!p2@Ncoa5!0.21!9.47!Ncoa5;;chr13:67825201..67825277,-!p1@Zfp71-rs1!0.21!6.63!Zfp71-rs1;;chr18:69504195..69504213,+!p4@Tcf4!0.21!5.99!Tcf4;;chr13:23460838..23460880,-!p2@Zfp322a!0.21!3.47!Zfp322a;;chr12:75009172..75009223,+!p3@Hif1a!0.21!2.84!Hif1a;;chr8: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!p6@Dach1!0.12!0.63!Dach1;;chr4:133309775..133309784,-!p15@Arid1a!0.12!0.63!Arid1a;;chr2:77654815..77654872,-!p2@Zfp385b!0.12!0.63!Zfp385b;;chr4:129118044..129118067,-!p1@Zbtb8b!0.12!0.63!Zbtb8b;;chr1:133903955..133903969,+!p10@Elk4!0.12!0.63!Elk4;;chr1:57029027..57029056,-!p7@Satb2!0.12!0.32!Satb2;;chr2:104966983..104966990,+!p11@Wt1!0.12!0.32!Wt1;;chr2:168032254..168032259,-!p6@Adnp!0.12!0.32!Adnp;;chr2:154395524..154395535,-!p5@E2f1!0.12!0.32!E2f1;;chr19:55969923..55969944,+!p6@Tcf7l2!0.12!0.32!Tcf7l2;;chr1:57028157..57028173,-!p3@Satb2!0.12!0.32!Satb2;;chr1:179372666..179372678,+!p11@Zfp238!0.12!0.32!Zfp238;;chr1:173987720..173987729,-!p1@Nhlh1!0.12!0.32!Nhlh1;;chr19:55969946..55969973,+!p8@Tcf7l2!0.12!0.32!Tcf7l2;;chr2:30700830..30700843,+!p4@Prrx2!0.12!0.32!Prrx2;;chr1:92949751..92949769,+!p5@Lrrfip1!0.12!0.32!Lrrfip1;;chr1:179374764..179374776,+!p5@Zfp238!0.12!0.32!Zfp238;;chr2:105002682..105002691,+!p10@Wt1!0.12!0.32!Wt1;;chr1:92950128..92950139,+!p4@Lrrfip1!0.12!0.32!Lrrfip1;;chr1:179372514..179372525,+!p7@Zfp238!0.12!0.32!Zfp238;;chr2:180377307..180377330,-!p2@Tcfl5!0.12!0.32!Tcfl5;;chr2:27531961..27531974,+!p7@Rxra!0.12!0.32!Rxra;;chr1:42752559..42752566,+!p@chr1:42752559..42752566,+!0.12!0.32!Pou3f3;;chr2:104966636..104966641,+!p12@Wt1!0.12!0.32!Wt1;;chr2:104966465..104966479,+!p6@Wt1!0.12!0.32!Wt1;;chr1:57028606..57028625,-!p4@Satb2!0.12!0.32!Satb2;;chr2:56967381..56967386,-!p8@Nr4a2!0.12!0.32!Nr4a2;;chr6:144158267..144158282,-!p16@Sox5!0.12!0.32!Sox5;;chr5:125523164..125523188,-!p8@Ncor2!0.12!0.32!Ncor2;;chr5:24104452..24104472,-!p11@Smarcd3!0.12!0.32!Smarcd3;;chr5:138187867..138187879,+!p21@Tsc22d4!0.12!0.32!Tsc22d4;;chr5:137041573..137041594,-!p9@Cux1!0.12!0.32!Cux1;;chr6:52167434..52167450,-!p3@Hoxa7!0.12!0.32!Hoxa7;;chr7:122989594..122989626,-!p1@Sox6!0.12!0.32!Sox6;;chr6:14851403..14851422,+!p8@Foxp2!0.12!0.32!Foxp2;;chr7:150155143..150155156,-!p1@Ascl2!0.12!0.32!Ascl2;;chr6:144157960..144157967,-!p20@Sox5!0.12!0.32!Sox5;;chr5:46247735..46247746,-!p13@Lcorl!0.12!0.32!Lcorl;;chr6:14851377..14851396,+!p10@Foxp2!0.12!0.32!Foxp2;;chr7:135019127..135019137,-!p6@Zfp668!0.12!0.32!Zfp668;;chr6:98978428..98978450,-!p15@Foxp1!0.12!0.32!Foxp1;;chr6:144158183..144158210,-!p11@Sox5!0.12!0.32!Sox5;;chr6:51382822..51382833,+!p2@Nfe2l3!0.12!0.32!Nfe2l3;;chr9:71959508..71959519,-!p15@Tcf12!0.12!0.32!Tcf12;;chr8:87298020..87298041,-!p9@Nfix!0.12!0.32!Nfix;;chr8:90328289..90328301,-!p4@Zfp423!0.12!0.32!Zfp423;;chr7:52071279..52071296,-!p9@Atf5!0.12!0.32!Atf5;;chr8:73222425..73222444,+!p2@Jund!0.12!0.32!Jund;;chr8:87297706..87297711,-!p19@Nfix!0.12!0.32!Nfix;;chr8:77540128..77540145,+!p2@Hmgxb4!0.12!0.32!Hmgxb4;;chr9:8900459..8900489,+!p1@Pgr!0.12!0.32!Pgr;;chrX:108009734..108009752,+!p2@Pou3f4!0.12!0.32!Pou3f4;;chr8:86590801..86590818,+!p2@Rfx1!0.12!0.32!Rfx1;;chr9:119893782..119893802,-!p1@Csrnp1!0.12!0.32!Csrnp1;;chr7:31065205..31065207,+!p1@LOC100504904!0.12!0.32!Thap8;;chr8:108582687..108582734,+!p4@Nfatc3!0.12!0.32!Nfatc3;;chr8:87297330..87297365,-!p5@Nfix!0.12!0.32!Nfix;;chr16:43503417..43503436,+!p26@Zbtb20!0.12!0.32!Zbtb20;;chr19:43686882..43686906,+!p2@Nkx2-3!0.12!0.32!Nkx2-3;;chr17:33766278..33766289,+!p11@Zfp414!0.12!0.32!Zfp414;;chr16:55838743..55838754,-!p6@Nfkbiz!0.12!0.32!Nfkbiz;;chr18:69681413..69681424,+!p24@Tcf4!0.12!0.32!Tcf4;;chr18:14130594..14130600,-!p7@Zfp521!0.12!0.32!Zfp521;;chr19:46380374..46380397,+!p7@Nfkb2!0.12!0.32!Nfkb2;;chr19:43686789..43686811,+!p1@Nkx2-3!0.12!0.32!Nkx2-3;;chr18:3280995..3281013,-!p23@Crem!0.12!0.32!Crem;;chr17:35031631..35031645,+!p5@Zbtb12!0.12!0.32!Zbtb12;;chr18:36441165..36441172,+!p6@Pura!0.12!0.32!Pura;;chr18:66098702..66098742,-!p1@Rax!0.12!0.32!Rax;;chr17:37139555..37139562,+!p6@Zfp57!0.12!0.32!Zfp57;;chr17:44873235..44873245,-!p17@Runx2!0.12!0.32!Runx2;;chr19:5447859..5447866,+!p3@Fosl1!0.12!0.32!Fosl1;;chr15:85566537..85566552,+!p2@Ppara!0.12!0.32!Ppara;;chr10:22451724..22451752,-!p4@Tbpl1!0.12!0.32!Tbpl1;;chr11:23978206..23978219,+!p12@Bcl11a!0.12!0.32!Bcl11a;;chr11:53164494..53164501,+!p10@Aff4!0.12!0.32!Aff4;;chr11:59319894..59319910,-!p12@Zkscan17!0.12!0.32!Zkscan17;;chr11:96143545..96143556,+!p6@Hoxb8!0.12!0.32!Hoxb8;;
@@ Line 45: / Line 45: @@
 |is_obsolete=
 |library_id=CNhs13087
-|library_id_phase_based=1:CNhs13087
+|library_id_phase_based=2:CNhs13087
+|microRNAs=
+|microRNAs_nn=
+|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/mouse#cage;sample;11810
+|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/mouse#cage;sample;11810
+|mm10bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/mm10_v2/basic/mouse.primary_cell.hCAGE/neurospheres%2520-%2520enteric%2520neuron%2520derived%252c%2520biol_rep1.CNhs13087.11810-124E1.mm10.nobarcode.bam
+|mm10ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/mm10_v2/basic/mouse.primary_cell.hCAGE/neurospheres%2520-%2520enteric%2520neuron%2520derived%252c%2520biol_rep1.CNhs13087.11810-124E1.mm10.nobarcode.ctss.bed.gz
+|mm9bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/mouse.primary_cell.hCAGE/neurospheres%2520-%2520enteric%2520neuron%2520derived%252c%2520biol_rep1.CNhs13087.11810-124E1.mm9.nobarcode.bam
+|mm9ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/mouse.primary_cell.hCAGE/neurospheres%2520-%2520enteric%2520neuron%2520derived%252c%2520biol_rep1.CNhs13087.11810-124E1.mm9.ctss.bed.gz
+|mm9fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/mouse.primary_cell.hCAGE/neurospheres%2520-%2520enteric%2520neuron%2520derived%252c%2520biol_rep1.CNhs13087.11810-124E1.mm9.nobarcode.rdna.fa.gz
 |name=neurospheres - enteric neuron derived, biol_rep1
 |namespace=
@@ Line 51: / Line 60: @@
 |profile_cagescan=,,,
 |profile_hcage=CNhs13087,LSID1000,release012,COMPLETED
-|profile_rnaseq=,,,
+|profile_rnaseq=
 |profile_srnaseq=,,,
 |repeat_enrich_byfamily=0.135359319396528,0,0,0,0,0.0183177743637663,-0.0343765741289779,0,0,0,0,0.0347543255454943,0,0,0,0,0,0,0.219312247648472,0,0,0,0,0,0,0,0,0,0,0,0,0.125141529340192,-0.345964454056122,0,0,0,0,0,0.0741559000965814,0.0896995239219733,0.143951984532316,-0.250443305391464,0.0193912716485273,0.289259909658879,0,0,0,0,0,0,0,0,0,0,0,0.0530880183785954,0,0,0,0,0,0,0,0.119093565942036,0.289259909658879,0,-0.117389802908326,-0.310650657339386,0.666630020836877,-0.0365927089968535,0,-0.0780086007519514,0.00734249333050641,0,0,0,0,-0.0474141593661661,0.548218177120861,-0.0788315948399074,0,0,0,0,0,0,0.184984833042155,-0.0596619352809076,0.020421699205538,0,0,0,0.247171877589459,0
@@ Line 64: / Line 73: @@
 |rna_rin=
 |rna_sample_type=total RNA
-|rna_tube_id=124E1
+|rna_tube_id=1.24E+03
 |rna_weight_ug=12
 |sample_age=
@@ Line 88: / Line 97: @@
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 |xref=
+|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_mouse;search_select_hide=table111:11810-124E1;search_select_hide=table117:11810-124E1
 }}

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FF:11810-124E1: Difference between revisions

From FANTOM5_SSTAR

Latest revision as of 18:21, 4 June 2020

CNhs13087

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	Mozilla Cavendish skin modified by DaSch for the Web Community Wiki GitHub project page – Report a bug – Skin version: 2.6.0