FF:763-44D9: Difference between revisions

Latest revision as of 19:20, 4 June 2020

Name:	testis, neonate N10
Species:	Mouse (Mus musculus)
Library ID:	CNhs11204
Sample type:	developmental
Genomic View:	UCSC
CAGEd-oPOSSUM:	link
ZENBU report :	link

Additional information

Sample information

strain	C57BL/6J
tissue	testis
dev stage	10 days neonate
sex	male
age	NA
cell type	CELL MIXTURE - tissue sample
cell line	NA
company	NA
collaboration	FANTOM5 OSC CORE (contact: Al Forrest)
External link for information	[{{{sample_info_link}}} {{{sample_info_link}}}]

RNA information

lot number	NA
catalog number	NA
sample type	NA
extraction protocol (Details)	NA

CAGE Accession numbers

Method		Sample accession id
CAGE		SAMD00004951

Library accession numbers

Library id		Method		Exp. accession id		Run accession id
CNhs11204		CAGE		DRX009109		DRR009983

Accession ID Mm9

Library id		BAM		CTSS
CNhs11204		DRZ001408		DRZ002791

Accession ID Mm10

Library id		BAM		CTSS
CNhs11204		DRZ012758		DRZ014141

Download raw sequence, BAM & CTSS

Mm9

Fasta	BAM	CTSS
download	download	donwload

Mm10

BAM	CTSS
download	donwload

Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.

Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. Analyst:NA link to dataset. data

CNhs11204

0	0
1	0
10	0
100	0
1000	-0.0155
1001	0.0663
1002	0.0785
1003	0.00516
1004	0
1005	-0.122
1006	0.0823
1007	0.134
1008	0
1009	0.185
101	0.178
1010	0
1011	-0.0642
1012	0.0433
1013	-0.126
1014	0.0433
1015	0.0472
1016	0.112
1017	0
1018	0
1019	0
102	0
1020	0
1021	0.0433
1022	0.0484
1023	0
1024	-0.0899
1025	0
1026	0
1027	0
1028	0.0433
1029	0.0045
103	0.147
1030	0
1031	-0.0596
1032	-0.121
1033	0.0769
1034	0
1035	0.152
1036	-0.01
1037	0
1038	-0.0592
1039	-0.0153
104	0
1040	-0.0776
1041	0.0433

Repeat families with enriched expression in this sampleSummary:Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed. Analyst:NA link to dataset. data

TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifsSummary:Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression Analyst: Michiel de Hoon link to dataset. data

library id: CNhs11204

Jaspar motif	Logo	P-value
MA0002.2	MA0002.2	3.4027e-4
MA0003.1	MA0003.1	0.783
MA0004.1	MA0004.1	0.163
MA0006.1	MA0006.1	0.114
MA0007.1	MA0007.1	0.941
MA0009.1	MA0009.1	0.472
MA0014.1	MA0014.1	0.384
MA0017.1	MA0017.1	0.0239
MA0018.2	MA0018.2	0.255
MA0019.1	MA0019.1	0.27
MA0024.1	MA0024.1	1.08537e-4
MA0025.1	MA0025.1	0.793
MA0027.1	MA0027.1	0.685
MA0028.1	MA0028.1	0.00267
MA0029.1	MA0029.1	0.648
MA0030.1	MA0030.1	0.577
MA0031.1	MA0031.1	0.57
MA0035.2	MA0035.2	0.97
MA0038.1	MA0038.1	0.0153
MA0039.2	MA0039.2	0.0287
MA0040.1	MA0040.1	0.67
MA0041.1	MA0041.1	0.608
MA0042.1	MA0042.1	0.743
MA0043.1	MA0043.1	0.0235
MA0046.1	MA0046.1	9.29886e-20
MA0047.2	MA0047.2	0.0375
MA0048.1	MA0048.1	0.225
MA0050.1	MA0050.1	0.355
MA0051.1	MA0051.1	0.993
MA0052.1	MA0052.1	0.0135
MA0055.1	MA0055.1	0.0325
MA0057.1	MA0057.1	0.296
MA0058.1	MA0058.1	0.0842
MA0059.1	MA0059.1	0.294
MA0060.1	MA0060.1	2.43626e-16
MA0061.1	MA0061.1	0.0384
MA0062.2	MA0062.2	8.04837e-5
MA0065.2	MA0065.2	0.0451
MA0066.1	MA0066.1	0.00932
MA0067.1	MA0067.1	0.295
MA0068.1	MA0068.1	0.677
MA0069.1	MA0069.1	0.516
MA0070.1	MA0070.1	0.181
MA0071.1	MA0071.1	0.951
MA0072.1	MA0072.1	0.599
MA0073.1	MA0073.1	0.664
MA0074.1	MA0074.1	0.389
MA0076.1	MA0076.1	1.37694e-4
MA0077.1	MA0077.1	0.893
MA0078.1	MA0078.1	0.241
MA0079.2	MA0079.2	0.138
MA0080.2	MA0080.2	5.24999e-6
MA0081.1	MA0081.1	0.44
MA0083.1	MA0083.1	0.113
MA0084.1	MA0084.1	0.608
MA0087.1	MA0087.1	0.952
MA0088.1	MA0088.1	0.849
MA0090.1	MA0090.1	0.599
MA0091.1	MA0091.1	0.0823
MA0092.1	MA0092.1	0.118
MA0093.1	MA0093.1	0.114
MA0099.2	MA0099.2	8.11781e-4
MA0100.1	MA0100.1	0.166
MA0101.1	MA0101.1	0.512
MA0102.2	MA0102.2	0.568
MA0103.1	MA0103.1	0.0531
MA0104.2	MA0104.2	0.0218
MA0105.1	MA0105.1	1.02361e-6
MA0106.1	MA0106.1	0.885
MA0107.1	MA0107.1	0.209
MA0108.2	MA0108.2	7.271e-4
MA0111.1	MA0111.1	0.257
MA0112.2	MA0112.2	8.78513e-5
MA0113.1	MA0113.1	0.894
MA0114.1	MA0114.1	0.0171
MA0115.1	MA0115.1	0.407
MA0116.1	MA0116.1	0.00135
MA0117.1	MA0117.1	0.683
MA0119.1	MA0119.1	0.0802
MA0122.1	MA0122.1	0.576
MA0124.1	MA0124.1	0.341
MA0125.1	MA0125.1	0.978
MA0131.1	MA0131.1	0.189
MA0135.1	MA0135.1	0.94
MA0136.1	MA0136.1	0.205
MA0137.2	MA0137.2	0.769
MA0138.2	MA0138.2	0.0118
MA0139.1	MA0139.1	0.299
MA0140.1	MA0140.1	0.133
MA0141.1	MA0141.1	0.726
MA0142.1	MA0142.1	0.00595
MA0143.1	MA0143.1	0.117
MA0144.1	MA0144.1	0.162
MA0145.1	MA0145.1	0.0112
MA0146.1	MA0146.1	0.531
MA0147.1	MA0147.1	0.0294
MA0148.1	MA0148.1	0.00909
MA0149.1	MA0149.1	0.61
MA0150.1	MA0150.1	0.0145
MA0152.1	MA0152.1	0.302
MA0153.1	MA0153.1	1.74566e-14
MA0154.1	MA0154.1	0.00237
MA0155.1	MA0155.1	0.319
MA0156.1	MA0156.1	0.238
MA0157.1	MA0157.1	0.0918
MA0159.1	MA0159.1	0.00752
MA0160.1	MA0160.1	0.909
MA0162.1	MA0162.1	0.0513
MA0163.1	MA0163.1	0.061
MA0164.1	MA0164.1	0.641
MA0258.1	MA0258.1	0.00216
MA0259.1	MA0259.1	0.0192

FANTOM5 phase1 novel unique motifsSummary:Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above Analyst: Michiel de Hoon link to dataset. data

library id: CNhs11204

Novel motif	Logo	P-value
1	1	0.178
10	10	0.679
100	100	0.744
101	101	0.257
102	102	0.769
103	103	0.343
104	104	0.955
105	105	0.202
106	106	0.00106
107	107	0.00567
108	108	0.53
109	109	0.689
11	11	0.271
110	110	0.773
111	111	0.53
112	112	0.529
113	113	0.511
114	114	0.064
115	115	0.603
116	116	0.209
117	117	0.568
118	118	0.984
119	119	0.108
12	12	0.568
120	120	0.244
121	121	0.433
122	122	0.833
123	123	0.08
124	124	0.234
125	125	0.144
126	126	0.977
127	127	0.313
128	128	0.0012
129	129	0.232
13	13	0.82
130	130	0.704
131	131	0.507
132	132	0.121
133	133	0.103
134	134	0.615
135	135	0.243
136	136	0.0171
137	137	0.592
138	138	0.576
139	139	0.0911
14	14	0.103
140	140	0.283
141	141	0.0672
142	142	0.787
143	143	0.0224
144	144	0.499
145	145	0.565
146	146	0.479
147	147	0.601
148	148	0.0636
149	149	0.237
15	15	0.153
150	150	0.711
151	151	0.131
152	152	0.232
153	153	0.214
154	154	0.955
155	155	0.758
156	156	0.00441
157	157	0.264
158	158	0.643
159	159	0.654
160	160	0.265
161	161	0.745
162	162	0.366
163	163	0.0663
164	164	0.746
165	165	0.0742
166	166	0.713
167	167	0.845
168	168	0.0931
169	169	0.0491
17	17	0.104
18	18	0.198
19	19	0.449
2	2	0.245
20	20	0.356
21	21	0.92
22	22	0.412
23	23	0.101
24	24	0.958
25	25	0.907
26	26	0.274
27	27	0.165
28	28	0.339
29	29	0.883
3	3	0.156
30	30	0.507
31	31	0.0991
32	32	0.146
33	33	0.951
34	34	0.525
35	35	0.189
36	36	0.267
37	37	0.16
38	38	0.637
39	39	0.672
4	4	0.899
40	40	0.839
41	41	0.091
42	42	0.325
43	43	0.143
44	44	0.141
45	45	0.446
46	46	0.109
47	47	0.359
48	48	0.509
49	49	0.18
5	5	0.0876
50	50	0.831
51	51	0.627
52	52	0.0848
53	53	0.448
54	54	0.485
55	55	0.483
56	56	0.181
57	57	0.397
58	58	0.309
59	59	0.0556
6	6	0.643
60	60	0.0606
61	61	0.649
62	62	0.199
63	63	0.173
64	64	0.583
65	65	0.114
66	66	0.317
67	67	0.959
68	68	0.0533
69	69	0.534
7	7	0.542
70	70	0.0683
71	71	0.171
72	72	0.556
73	73	0.55
74	74	0.369
75	75	0.457
76	76	0.627
77	77	0.261
78	78	0.288
79	79	0.436
8	8	0.185
80	80	0.368
81	81	0.288
82	82	0.354
83	83	0.967
84	84	0.378
85	85	0.0219
86	86	0.25
87	87	0.274
88	88	0.206
89	89	0.0622
9	9	0.628
90	90	0.727
91	91	0.0503
92	92	0.273
93	93	0.917
94	94	0.0715
95	95	0.729
96	96	0.432
97	97	0.666
98	98	0.0823
99	99	0.325

de novo motifs identified by HOMER in promoters active in this sampleSummary:The result of HOMER in this sample is shown. Analyst:NA library id: CNhs11204

FANTOM5 (FF) ontology

Direct parent terms

is_a relathionship
EFO:0002091 biological replicate
FF:0011422 mouse testis- neonate N10 sample

Ancestor terms (non development)Summary:Connected ontology terms with is_a, part_of or located_in relationship Analyst: Hideya Kawaji link to source data data

UBERON: Anatomy
0000468 (multi-cellular organism)
0000473 (testis)
0000991 (gonad)
0000479 (tissue)
0005156 (reproductive structure)
0000466 (immaterial anatomical entity)
0000062 (organ)
0004120 (mesoderm-derived structure)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000990 (reproductive system)
0002553 (anatomical cavity)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0003135 (male reproductive organ)
0003133 (reproductive organ)
0002323 (body cavity)
0000464 (anatomical space)
0004458 (body cavity or lining)
0010317 (germ layer / neural crest derived structure)
0003101 (male organism)
0000079 (male reproductive system)

FF: FANTOM5
0000102 (sample by type)
0000101 (sample by species)
0000103 (mouse sample)
0000001 (sample)
0000004 (tissue sample)
0000303 (neonate sample - mouse)
0000305 (mouse neonate N10 sample)
0011422 (mouse testis- neonate N10 sample)

Ancestor terms (development)Summary:Connected ontology terms with develops_from, derives_from or preceded_by relationship Analyst: Hideya Kawaji link to source data data
UBERON:0009117 (indifferent gonad)
UBERON:0002532 (epiblast (generic))
UBERON:0006603 (presumptive mesoderm)
UBERON:0005564 (gonad primordium)
UBERON:0010316 (germ layer / neural crest)
FF:0000294 (mouse embryonic day 11 sample)

@@ Line 1: / Line 1: @@
 {{f5samples
 |DRA_sample_Accession=CAGE@SAMD00004951
-|accession_numbers=CAGE;DRX009109;DRR009983;DRZ001408;DRZ002791
+|accession_numbers=CAGE;DRX009109;DRR009983;DRZ001408;DRZ002791;DRZ012758;DRZ014141
 |ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0000473,UBERON:0000991,UBERON:0000479,UBERON:0005156,UBERON:0000466,UBERON:0000062,UBERON:0004120,UBERON:0000061,UBERON:0000465,UBERON:0000990,UBERON:0002553,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0003135,UBERON:0003133,UBERON:0002323,UBERON:0000464,UBERON:0004458,UBERON:0010317,UBERON:0003101,UBERON:0000079
 |ancestors_in_cell_lineage_facet=
@@ Line 9: / Line 9: @@
 |created_by=
 |creation_date=
-|data_phase=1
+|data_phase=2
-|datafreeze_phase=1
+|datafreeze_phase=2
 |def=
 |expression_enrichment_score=chr1:168168856..168168893,-!p1@Mael!1.79!61.24!Mael;;chrX:83437105..83437121,+!p1@Nr0b1!1.79!60.82!Nr0b1;;chr2:38570011..38570034,-!p1@Nr5a1!1.79!60.29!Nr5a1;;chrX:133654667..133654672,-!p1@Esx1!1.74!53.37!Esx1;;chrX:58146612..58146615,-!p1@Sox3!1.70!48.97!Sox3;;chr19:25580226..25580261,+!p2@Dmrt1!1.70!48.55!Dmrt1;;chr19:25580272..25580305,+!p3@Dmrt1!1.69!47.71!Dmrt1;;chr14:63864056..63864102,-!p1@Gata4!1.67!78.23!Gata4;;chr4:89354729..89354776,+!p1@Dmrta1!1.65!43.94!Dmrta1;;chr2:104966874..104966907,+!p2@Wt1!1.64!42.15!Wt1;;chrX:137135036..137135064,-!p4@Tsc22d3!1.59!72.04!Tsc22d3;;chr10:22539932..22539956,-!p1@Tcf21!1.57!92.59!Tcf21;;chr19:25580110..25580163,+!p1@Dmrt1!1.57!35.86!Dmrt1;;chr4:107356833..107356836,-!p7@Dmrtb1!1.55!34.29!Dmrtb1;;chrX:35474351..35474366,+!p1@Rhox13!1.55!34.18!Rhox13;;chr2:104966933..104966966,+!p3@Wt1!1.50!30.30!Wt1;;chr3:54985946..54985981,+!p1@Sohlh2!1.46!28.00!Sohlh2;;chr4:89354785..89354801,+!p2@Dmrta1!1.46!27.89!Dmrta1;;chr2:104966766..104966786,+!p1@Wt1!1.45!42.47!Wt1;;chr1:140739014..140739032,-!p1@Lhx9!1.40!30.30!Lhx9;;chrX:90531838..90531861,+!p1@Arx!1.35!26.74!Arx;;chr6:85463580..85463585,-!p1@Egr4!1.35!21.39!Egr4;;chr1:168168817..168168850,-!p2@Mael!1.32!20.13!Mael;;chr17:25707623..25707639,-!p1@Sox8!1.30!78.96!Sox8;;chr19:25580353..25580364,+!p4@Dmrt1!1.27!17.83!Dmrt1;;chr15:102828658..102828678,+!p1@Hoxc6!1.21!15.10!Hoxc6;;chr13:112476433..112476448,+!p2@Mier3!1.20!28.00!Mier3;;chr2:77654815..77654872,-!p2@Zfp385b!1.19!17.93!Zfp385b;;chr10:80809447..80809515,-!p5@Hmg20b!1.19!17.72!Hmg20b;;chr17:68663935..68663949,+!p@chr17:68663935..68663949,+!1.18!14.05!L3mbtl4;;chr2:180377386..180377462,-!p1@Tcfl5!1.15!16.04!Tcfl5;;chr5:135582751..135582788,+!p1@Mlxipl!1.14!50.75!Mlxipl;;chr15:35225845..35225867,+!p1@Osr2!1.14!32.09!Osr2;;chr14:63890459..63890484,-!p4@Gata4!1.12!12.27!Gata4;;chrX:7544943..7545001,-!p1@Gata1!1.12!12.06!Gata1;;chr14:69808725..69808748,+!p1@Nkx3-1!1.11!11.95!Nkx3-1;;chrX:104863295..104863324,+!p1@Tbx22!1.08!11.12!Tbx22;;chr13:112476264..112476282,+!p3@Mier3!1.04!14.26!Mier3;;chrX:45245679..45245702,-!p1@Smarca1!1.00!41.00!Smarca1;;chr8:72676653..72676668,+!p4@2310045N01Rik,p4@Mef2b!1.00!9.02!Mef2b;;chrX:109714331..109714347,+!p1@Zfp711!0.99!37.23!Zfp711;;chr2:25702844..25702859,-!p1@Sohlh1!0.98!8.60!Sohlh1;;chr2:77654650..77654685,-!p3@Zfp385b!0.97!10.59!Zfp385b;;chrX:154006915..154006923,-!p1@Yy2!0.97!8.39!Yy2;;chr14:63890491..63890516,-!p2@Gata4!0.97!8.39!Gata4;;chr2:104966662..104966673,+!p4@Wt1!0.96!8.07!Wt1;;chrX:7553670..7553688,-!p4@Gata1!0.93!7.55!Gata1;;chr2:105003277..105003280,+!p5@Wt1!0.92!7.24!Wt1;;chr19:25580323..25580335,+!p5@Dmrt1!0.91!7.13!Dmrt1;;chr14:104867201..104867258,-!p1@Pou4f1!0.90!9.86!Pou4f1;;chrX:133654344..133654358,-!p2@Esx1!0.90!7.03!Esx1;;chr8:26958093..26958148,-!p2@Ash2l!0.86!6.29!Ash2l;;chrX:131559846..131559883,-!p3@Zmat1!0.86!6.29!Zmat1;;chr14:63890519..63890539,-!p3@Gata4!0.86!6.19!Gata4;;chr15:76701495..76701535,-!p3@Zfp251!0.86!6.19!Zfp251;;chr2:74549968..74549996,+!p1@Hoxd3!0.84!7.45!Hoxd3;;chr15:76287876..76287894,+!p1@Scx!0.82!32.93!Scx;;chr7:6615049..6615056,-!p1@uc009fbu.1!0.81!5.45!Zim2;;chrX:7553714..7553733,-!p6@Gata1!0.81!5.45!Gata1;;chr2:153475210..153475252,+!p2@Dnmt3b!0.80!15.41!Dnmt3b;;chr5:31271028..31271040,+!p1@Tcf23!0.80!5.35!Tcf23;;chr4:89354863..89354871,+!p3@Dmrta1!0.80!5.35!Dmrta1;;chr10:126778916..126778974,-!p1@Gli1!0.79!12.37!Gli1;;chr4:119960301..119960359,-!p1@Foxo6!0.77!16.99!Foxo6;;chr2:74529970..74529997,+!p1@Hoxd10!0.77!4.93!Hoxd10;;chr7:147129712..147129774,+!p1@Utf1!0.77!4.93!Utf1;;chr7:31383850..31383874,-!p1@Zbtb32!0.77!4.93!Zbtb32;;chr2:104971121..104971138,+!p14@Wt1!0.77!4.82!Wt1;;chr11:112643496..112643562,+!p1@Sox9!0.76!196.72!Sox9;;chrX:45245644..45245666,-!p2@Smarca1!0.76!16.67!Smarca1;;chr17:87153440..87153451,+!p4@Epas1!0.76!10.38!Epas1;;chr7:31383882..31383903,-!p2@Zbtb32!0.76!4.72!Zbtb32;;chr12:30525072..30525115,+!p14@Myt1l!0.76!4.72!Myt1l;;chr12:3891810..3891829,+!p2@Dnmt3a!0.75!7.45!Dnmt3a;;chr2:77654936..77654988,-!p4@Zfp385b!0.75!5.77!Zfp385b;;chr2:172944903..172944916,-!p1@Ctcfl!0.75!4.61!Ctcfl;;chr2:25702816..25702827,-!p2@Sohlh1!0.75!4.61!Sohlh1;;chr15:102828642..102828653,+!p2@Hoxc6!0.74!4.51!Hoxc6;;chr7:148514080..148514108,-!p4@Deaf1!0.73!9.96!Deaf1;;chr15:75578637..75578669,-!p2@Mafa!0.73!5.03!Mafa;;chr2:169968173..169968178,-!p2@Zfp217!0.73!4.40!Zfp217;;chr2:104966983..104966990,+!p11@Wt1!0.72!4.30!Wt1;;chr7:52960555..52960662,+!p1@Dbp!0.71!39.22!Dbp;;chr15:97738692..97738747,-!p1@Vdr!0.71!25.17!Vdr;;chr18:74375772..74375799,+!p2@Cxxc1!0.71!13.42!Cxxc1;;chr7:25655099..25655143,+!p1@Dmrtc2!0.71!4.09!Dmrtc2;;chr2:74536026..74536039,+!p1@Hoxd9!0.71!4.09!Hoxd9;;chr2:160698288..160698358,-!p3@Zhx3!0.70!13.84!Zhx3;;chr2:169458799..169458832,+!p5@Tshz2!0.70!7.03!Tshz2;;chr7:89137163..89137200,-!p1@Bnc1!0.70!5.03!Bnc1;;chr2:152223441..152223465,-!p2@Sox12!0.69!17.93!Sox12;;chr2:104966909..104966920,+!p8@Wt1!0.69!3.88!Wt1;;chr2:91077082..91077122,-!p1@Ddb2!0.68!26.74!Ddb2;;chr2:152758901..152758925,-!p1@Foxs1!0.68!18.87!Foxs1;;chr16:18587076..18587106,-!p1@Tbx1!0.68!5.66!Tbx1;;chr2:38567715..38567730,-!p2@Nr5a1!0.68!3.77!Nr5a1;;chr17:15701286..15701323,-!p1@Prdm9!0.67!16.36!Prdm9;;chr2:166888058..166888105,-!p2@Znfx1!0.67!13.21!Znfx1;;chr18:11052456..11052477,+!p3@Gata6!0.67!12.90!Gata6;;chr8:107033774..107033794,-!p1@Ccdc79!0.67!4.61!Ccdc79;;chr12:34642510..34642530,+!p1@Twist1!0.66!12.90!Twist1;;chr4:134708451..134708469,+!p1@Runx3!0.66!6.82!Runx3;;chr13:83712735..83712761,+!p9@Mef2c!0.66!3.57!Mef2c;;chrX:131543731..131543764,-!p1@Zmat1!0.64!28.73!Zmat1;;chr9:48644306..48644364,-!p1@Zbtb16!0.64!15.41!Zbtb16;;chr16:55966407..55966447,+!p6@Rpl24,p6@Zbtb11!0.64!9.02!Zbtb11;;chr17:15701263..15701277,-!p2@Prdm9!0.64!9.02!Prdm9;;chr18:74375754..74375763,+!p4@Cxxc1!0.64!4.19!Cxxc1;;chr9:44249274..44249313,-!p1@Foxr1!0.64!3.36!Foxr1;;chrX:133654245..133654253,-!p3@Esx1!0.64!3.36!Esx1;;chrX:7544928..7544938,-!p2@Gata1!0.64!3.36!Gata1;;chr12:12948633..12948651,-!p1@Mycn!0.63!37.43!Mycn;;chr2:166888481..166888548,-!p3@Znfx1!0.63!9.96!Znfx1;;chr17:71200415..71200427,-!p5@Tgif1!0.63!5.77!Tgif1;;chrX:95345005..95345053,+!p1@Ar!0.63!3.25!Ar;;chr1:136456791..136456810,+!p1@Kdm5b!0.62!137.05!Kdm5b;;chr14:47896467..47896523,-!p1@Wdhd1!0.62!45.82!Wdhd1;;chr7:26067619..26067702,+!p2@Cic!0.62!21.08!Cic;;chr12:3891753..3891801,+!p4@Dnmt3a!0.62!5.56!Dnmt3a;;chr11:52096804..52096896,-!p1@Tcf7!0.61!29.47!Tcf7;;chr3:5218629..5218684,+!p1@Zfhx4!0.61!11.53!Zfhx4;;chr7:77511403..77511450,-!p3@Nr2f2!0.61!7.34!Nr2f2;;chr18:11052485..11052508,+!p2@Gata6!0.60!9.75!Gata6;;chr7:30092993..30093076,+!p1@Dpf1!0.60!5.66!Dpf1;;chr2:119698528..119698571,+!p3@Mga!0.59!12.06!Mga;;chr13:112476296..112476308,+!p4@Mier3!0.59!3.36!Mier3;;chr19:53384985..53385042,+!p1@Mxi1!0.58!107.59!Mxi1;;chr1:167932722..167932740,-!p2@Pou2f1!0.58!5.24!Pou2f1;;chr2:104967357..104967379,+!p9@Wt1!0.58!2.83!Wt1;;chr10:61595830..61595846,+!p1@Neurog3!0.58!2.83!Neurog3;;chr8:109817400..109817417,+!p1@Nfat5!0.57!70.68!Nfat5;;chr6:53018556..53018650,-!p1@Jazf1!0.57!22.02!Jazf1;;chr19:7342725..7342784,+!p1@Rcor2!0.57!13.32!Rcor2;;chr14:69808759..69808769,+!p2@Nkx3-1!0.57!2.73!Nkx3-1;;chr15:81633165..81633188,+!p2@Tef!0.56!26.95!Tef;;chr11:23670953..23671028,-!p1@Rel!0.56!18.35!Rel;;chr2:181194069..181194144,-!p1@Zbtb46!0.56!18.14!Zbtb46;;chr7:6649134..6649167,-!p1@Zim1!0.56!17.30!Zim1;;chr4:58956447..58956510,+!p1@Zkscan16!0.56!6.61!Zkscan16;;chr8:124984566..124984595,-!p1@Snai3!0.56!4.40!Snai3;;chr5:108494686..108494701,+!p3@Mtf2!0.56!3.98!Mtf2;;chr4:84321317..84321332,-!p4@Bnc2!0.56!2.62!Bnc2;;chr6:53018700..53018759,-!p2@Jazf1!0.55!11.22!Jazf1;;chrX:7341077..7341091,+!p5@Tfe3!0.55!4.82!Tfe3;;chr14:52634651..52634678,-!p7@Zfp219!0.55!4.40!Zfp219;;chr7:86956107..86956152,+!p@chr7:86956107..86956152,+!0.55!4.30!Mesp2;;chr8:123608252..123608268,+!p1@Foxf1a!0.55!4.19!Foxf1a;;chr2:168592591..168592604,-!p2@Sall4!0.55!2.52!Sall4;;chr10:126778639..126778670,-!p3@Gli1!0.55!2.52!Gli1;;chr16:50432467..50432522,-!p1@Bbx!0.54!61.03!Bbx;;chr2:168415815..168415872,-!p1@Nfatc2!0.54!16.57!Nfatc2;;chr17:45570455..45570479,-!p2@Cdc5l!0.54!11.22!Cdc5l;;chrX:131543765..131543775,-!p2@Zmat1!0.54!6.08!Zmat1;;chrX:109714433..109714444,+!p2@Zfp711!0.54!3.46!Zfp711;;chr2:156665817..156665877,+!p1@Tgif2!0.53!19.19!Tgif2;;chr2:152223469..152223512,-!p1@Sox12!0.53!15.52!Sox12;;chr16:43363152..43363186,+!p3@Zbtb20!0.53!6.50!Zbtb20;;chr17:46520518..46520571,+!p2@Zfp318!0.53!6.08!Zfp318;;chrX:45245621..45245632,-!p3@Smarca1!0.53!3.57!Smarca1;;chr2:74550015..74550057,+!p2@Hoxd3!0.53!2.41!Hoxd3;;chr2:104966465..104966479,+!p6@Wt1!0.53!2.41!Wt1;;chr2:104966636..104966641,+!p12@Wt1!0.53!2.41!Wt1;;chr19:38893646..38893732,-!p1@Noc3l!0.52!31.98!Noc3l;;chr2:169458192..169458247,+!p1@Tshz2!0.52!26.32!Tshz2;;chr9:65675514..65675547,-!p2@Zfp609!0.52!13.32!Zfp609;;chr7:130644017..130644092,-!p1@Zkscan2!0.52!5.14!Zkscan2;;chr15:35225873..35225889,+!p2@Osr2!0.52!2.31!Osr2;;chr2:180377307..180377330,-!p2@Tcfl5!0.52!2.31!Tcfl5;;chr2:77654793..77654805,-!p7@Zfp385b!0.52!2.31!Zfp385b;;chr14:65977324..65977372,+!p2@Zfp395!0.51!16.15!Zfp395;;chrX:7339938..7339963,+!p1@Tfe3!0.51!14.26!Tfe3;;chr19:28754692..28754757,-!p1@Glis3!0.51!11.74!Glis3;;chr7:77511311..77511352,-!p4@Nr2f2!0.51!5.35!Nr2f2;;chr4:102787521..102787588,+!p4@Mier1!0.51!4.61!Mier1;;chr10:5636354..5636373,-!p2@Esr1!0.51!2.20!Esr1;;chr8:74842792..74842814,+!p2@Klf2!0.51!2.20!Klf2;;chr2:168592636..168592651,-!p1@Sall4!0.51!2.20!Sall4;;chr14:76814539..76814600,+!p2@Tsc22d1!0.50!40.79!Tsc22d1;;chr9:57684520..57684612,-!p1@Arid3b!0.50!24.75!Arid3b;;chr6:86619104..86619119,-!p1@Mxd1!0.50!23.17!Mxd1;;chr10:5636374..5636421,-!p1@Esr1!0.50!2.94!Esr1;;chr2:168032516..168032525,-!p5@Adnp!0.49!3.77!Adnp;;chrX:7339674..7339688,+!p6@Tfe3!0.49!3.67!Tfe3;;chr4:107107175..107107204,+!p1@Glis1!0.49!2.62!Glis1;;chrX:83437070..83437078,+!p2@Nr0b1!0.49!2.10!Nr0b1;;chrX:70587953..70587968,+!p1@Zfp275!0.48!29.47!Zfp275;;chr2:119698241..119698291,+!p2@Mga!0.48!12.90!Mga;;chr10:41996550..41996569,-!p2@Foxo3!0.48!11.95!Foxo3;;chr11:98789099..98789124,+!p3@Rara!0.48!8.07!Rara;;chr19:9017011..9017032,+!p4@Mta2!0.48!3.77!Mta2;;chr2:38206580..38206600,+!p2@Lhx2!0.48!2.73!Lhx2;;chr4:84321300..84321315,-!p2@Bnc2!0.48!2.62!Bnc2;;chr13:44825163..44825176,+!p18@Jarid2!0.48!1.99!Jarid2;;chr5:35731493..35731531,+!p1@Hmx1!0.48!1.99!Hmx1;;chr1:136456767..136456790,+!p2@Kdm5b!0.47!54.95!Kdm5b;;chr11:101413151..101413207,-!p1@Brca1!0.47!25.48!Brca1;;chr1:74634538..74634615,-!p1@Zfp142!0.47!21.92!Zfp142;;chr6:47785649..47785724,+!p1@Zfp398!0.47!21.50!Zfp398;;chr3:52072296..52072310,+!p3@Foxo1!0.47!13.11!Foxo1;;chr2:128769696..128769712,-!p2@Zc3h8!0.47!7.97!Zc3h8;;chr1:95651388..95651434,-!p2@Thap4!0.47!5.66!Thap4;;chr11:3190303..3190351,+!p3@Patz1!0.47!4.61!Patz1;;chr10:5734525..5734569,-!p3@Esr1!0.47!3.77!Esr1;;chr11:102177921..102177960,-!p9@Ubtf!0.47!3.15!Ubtf;;chr7:30088977..30089002,+!p2@Dpf1!0.47!3.04!Dpf1;;chr2:25562263..25562314,+!p2@Bmyc!0.46!9.54!Bmyc;;chr6:133985971..133985991,+!p6@Etv6!0.46!6.40!Etv6;;chr12:72117645..72117677,+!p3@Arid4a!0.46!4.93!Arid4a;;chr12:119540395..119540415,-!p5@Sp4!0.46!3.25!Sp4;;chr12:77278238..77278252,-!p1@Esr2!0.46!1.89!Esr2;;chr7:31383918..31383931,-!p4@Zbtb32!0.46!1.89!Zbtb32;;chr3:94176733..94176794,+!p1@Rorc!0.45!19.40!Rorc;;chr17:71199121..71199165,-!p2@Tgif1!0.45!17.83!Tgif1;;chr6:133985993..133986029,+!p2@Etv6!0.45!16.04!Etv6;;chr14:76814736..76814781,+!p4@Tsc22d1!0.45!14.37!Tsc22d1;;chr5:138186979..138187025,+!p4@Tsc22d4!0.45!8.70!Tsc22d4;;chr17:84587167..84587239,-!p2@Zfp36l2!0.45!8.07!Zfp36l2;;chr4:97444616..97444631,+!p7@Nfia!0.45!6.50!Nfia;;chr7:20162663..20162678,+!p1@Zfp296!0.45!2.62!Zfp296;;chr15:81575487..81575561,+!p1@Zc3h7b!0.44!54.00!Zc3h7b;;chr10:67599319..67599360,-!p2@Arid5b!0.44!26.84!Arid5b;;chr9:122832168..122832210,+!p1@Zfp105!0.44!18.56!Zfp105;;chr10:30522690..30522752,-!p2@Ncoa7!0.44!14.79!Ncoa7;;chr4:102787317..102787364,+!p3@Mier1!0.44!13.84!Mier1;;chr2:169458519..169458555,+!p2@Tshz2!0.44!9.54!Tshz2;;chrX:70587926..70587945,+!p2@Zfp275!0.44!7.86!Zfp275;;chr17:71202822..71202877,-!p3@Tgif1!0.44!6.71!Tgif1;;chr19:53384910..53384937,+!p3@Mxi1!0.44!6.40!Mxi1;;chr19:5912834..5912852,-!p2@Dpf2!0.44!5.77!Dpf2;;chr6:38204274..38204327,-!p3@D630045J12Rik!0.44!4.30!D630045J12Rik;;chr9:48644429..48644462,-!p3@Zbtb16!0.44!4.19!Zbtb16;;chr16:3872286..3872315,-!p3@Zfp597!0.44!4.09!Zfp597;;chr14:75684203..75684214,+!p4@Zc3h13!0.44!3.77!Zc3h13;;chr5:31270977..31270988,+!p3@Tcf23!0.44!1.78!Tcf23;;chr7:150155143..150155156,-!p1@Ascl2!0.44!1.78!Ascl2;;chr2:74529998..74530020,+!p2@Hoxd10!0.44!1.78!Hoxd10;;chr2:74549945..74549965,+!p4@Hoxd3!0.44!1.78!Hoxd3;;chr5:125659525..125659599,-!p1@Ncor2!0.43!150.89!Ncor2;;chr1:182499044..182499091,+!p1@Parp1!0.43!80.53!Parp1;;chr19:53384965..53384984,+!p4@Mxi1!0.43!6.40!Mxi1;;chr8:83262929..83262957,-!p1@Smarca5!0.43!6.08!Smarca5;;chr2:153475178..153475196,+!p1@Dnmt3b!0.43!4.51!Dnmt3b;;chr11:23670750..23670789,-!p2@Rel!0.43!3.98!Rel;;chr18:36953486..36953503,+!p2@Zmat2!0.43!3.36!Zmat2;;chr5:108494765..108494786,+!p2@Mtf2!0.43!2.52!Mtf2;;chr6:72850124..72850210,-!p7@Kcmf1!0.43!2.52!Kcmf1;;chr2:127308277..127308313,-!p4@Kcnip3!0.43!2.20!Kcnip3;;chr14:63890660..63890687,-!p7@Gata4!0.43!1.68!Gata4;;chr14:63864337..63864381,-!p6@Gata4!0.43!1.68!Gata4;;chr17:35642973..35642994,+!p2@Pou5f1!0.43!1.68!Pou5f1;;chr4:84321280..84321298,-!p5@Bnc2!0.43!1.68!Bnc2;;chr2:74543397..74543435,+!p2@Hoxd8!0.43!1.68!Hoxd8;;chr2:74543202..74543213,+!p3@Hoxd8!0.43!1.68!Hoxd8;;chr11:97524509..97524595,+!p1@Mllt6!0.42!27.79!Mllt6;;chr4:43575544..43575565,+!p2@Creb3!0.42!13.42!Creb3;;chr13:44826095..44826185,+!p4@Jarid2!0.42!11.22!Jarid2;;chr16:17531086..17531109,-!p3@Thap7!0.42!6.82!Thap7;;chr16:43363190..43363242,+!p2@Zbtb20!0.42!6.71!Zbtb20;;chr15:102301130..102301147,+!p3@Pcbp2!0.42!6.61!Pcbp2;;chr10:127896024..127896045,+!p3@Smarcc2!0.42!5.14!Smarcc2;;chr4:6917971..6918000,-!p3@Tox!0.42!3.98!Tox;;chr5:138199361..138199441,+!p2@Tsc22d4!0.42!3.77!Tsc22d4;;chr8:72498017..72498059,-!p13@Gatad2a!0.42!3.25!Gatad2a;;chr18:24113207..24113218,+!p3@Zfp397!0.42!2.94!Zfp397;;chr18:65740031..65740054,+!p5@Zfp532!0.42!2.20!Zfp532;;chr1:182499095..182499141,+!p2@Parp1!0.41!40.58!Parp1;;chr2:166888107..166888224,-!p1@Znfx1!0.41!33.24!Znfx1;;chr12:100631220..100631300,-!p2@Foxn3!0.41!20.24!Foxn3;;chr7:77511234..77511302,-!p2@Nr2f2!0.41!14.89!Nr2f2;;chr19:28086045..28086080,-!p4@Rfx3!0.41!10.49!Rfx3;;chr3:94641302..94641341,+!p3@Pogz!0.41!8.70!Pogz;;chr17:87153462..87153473,+!p3@Epas1!0.41!8.18!Epas1;;chr11:59285934..59285962,-!p1@Zfp867!0.41!7.97!Zfp867;;chr4:54957910..54957954,+!p2@Zfp462!0.41!6.40!Zfp462;;chr17:71200558..71200572,-!p4@Tgif1!0.41!5.14!Tgif1;;chr19:53385060..53385069,+!p6@Mxi1!0.41!2.62!Mxi1;;chr1:120950269..120950287,-!p6@Gli2!0.41!2.31!Gli2;;chr19:26679654..26679675,+!p1@Smarca2!0.40!20.66!Smarca2;;chr16:55966451..55966484,+!p3@Rpl24,p3@Zbtb11!0.40!13.00!Zb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tb37;;chr3:52072315..52072327,+!p2@Foxo1!0.18!7.76!Foxo1;;chr11:70577930..70577985,+!p1@Zfp3!0.18!7.34!Zfp3;;chr8:97856080..97856150,-!p2@Zfp319!0.18!7.24!Zfp319;;chr11:102180696..102180760,-!p2@Ubtf!0.18!6.19!Ubtf;;chr2:83499707..83499708,+!p6@Zc3h15!0.18!4.09!Zc3h15;;chr10:79896690..79896746,-!p4@Tcf3!0.18!3.98!Tcf3;;chrX:108810678..108810736,-!p1@Hdx!0.18!3.88!Hdx;;chr15:100058660..100058711,+!p1@Gm1862,p2@Atf1!0.18!3.77!Atf1;;chr19:8876976..8877011,+!p1@Zbtb3!0.18!3.77!Zbtb3;;chr1:181733737..181733755,-!p2@Ahctf1!0.18!3.57!Ahctf1;;chr1:162836606..162836631,+!p2@Rc3h1!0.18!2.94!Rc3h1;;chr2:17986419..17986443,+!p3@Mllt10!0.18!2.83!Mllt10;;chr7:50568466..50568486,-!p2@Zfp715!0.18!2.83!Zfp715;;chr11:85646263..85646278,+!p2@Tbx2!0.18!2.73!Tbx2;;chr12:75009172..75009223,+!p3@Hif1a!0.18!2.52!Hif1a;;chr16:43619057..43619078,+!p8@Zbtb20!0.18!1.99!Zbtb20;;chr13:5860872..5860883,+!p3@Klf6!0.18!1.89!Klf6;;chr15:25914217..25914232,+!p3@Zfp622!0.18!1.78!Zfp622;;chr3:54611738..54611749,-!p3@Rfxap!0.18!1.68!Rfxap;;chr15:96118197..96118200,+!p3@Arid2!0.18!1.47!Arid2;;chr8:81552528..81552553,+!p6@Zfp827!0.18!1.36!Zfp827;;chr7:17200403..17200416,-!p5@Grlf1!0.18!1.36!Grlf1;;chr17:32525943..32525992,-!p4@Wiz!0.18!1.26!Wiz;;chr14:65568567..65568588,-!p3@Hmbox1!0.18!1.26!Hmbox1;;chr8:109868335..109868338,+!p3@Nfat5!0.18!1.26!Nfat5;;chr8:72356384..72356434,+!p2@Pbx4!0.18!1.26!Pbx4;;chr7:31206743..31206761,+!p1@Nfkbid!0.18!1.05!Nfkbid;;chr17:87153505..87153516,+!p6@Epas1!0.18!1.05!Epas1;;chr2:30700857..30700873,+!p3@Prrx2!0.18!1.05!Prrx2;;chr2:152758938..152758954,-!p2@Foxs1!0.18!1.05!Foxs1;;chr12:9581243..9581254,+!p4@Osr1!0.18!1.05!Osr1;;chr15:75799634..75799645,+!p4@Zfp707!0.18!0.73!Zfp707;;chr18:36441100..36441113,+!p3@Pura!0.18!0.73!Pura;;chr15:81633116..81633125,+!p6@Tef!0.18!0.73!Tef;;chr4:102787381..102787397,+!p9@Mier1!0.18!0.73!Mier1;;chr4:150482353..150482386,-!p6@Camta1!0.18!0.52!Camta1;;chr2:74542974..74542986,+!p5@Hoxd8!0.18!0.52!Hoxd8;;chr3:8667049..8667056,-!p5@Hey1!0.18!0.52!Hey1;;chr2:74535796..74535808,+!p3@Hoxd9!0.18!0.52!Hoxd9;;chr2:74549915..74549930,+!p6@Hoxd3!0.18!0.52!Hoxd3;;chr15:102820964..102821006,+!p1@Hoxc8!0.18!0.52!Hoxc8;;chr12:12947199..12947213,-!p2@Mycn!0.18!0.52!Mycn;;chr15:102839948..102839975,+!p3@Hoxc6!0.18!0.52!Hoxc6;;chr13:53568191..53568219,-!p2@Msx2!0.18!0.52!Msx2;;chr8:74842780..74842791,+!p4@Klf2!0.18!0.52!Klf2;;chr8:26950912..26950933,-!p4@Ash2l!0.18!0.52!Ash2l;;chr7:116093986..116093999,+!p4@Tub!0.18!0.52!Tub;;chr19:25684746..25684751,+!p2@Dmrt3!0.18!0.52!Dmrt3;;chr16:55838743..55838754,-!p6@Nfkbiz!0.18!0.52!Nfkbiz;;chr11:95170996..95171026,-!p3@Myst2!0.18!0.52!Myst2;;chr11:62271076..62271096,-!p19@Ncor1!0.18!0.52!Ncor1;;chr10:75384163..75384185,-!p3@Smarcb1!0.18!0.52!Smarcb1;;chr11:98826178..98826197,+!p7@Rara!0.18!0.52!Rara;;chr2:180377331..180377344,-!p3@Tcfl5!0.18!0.52!Tcfl5;;chr6:52663725..52663794,+!p1@Tax1bp1!0.17!199.65!Tax1bp1;;chr11:95171500..95171527,-!p1@Myst2!0.17!80.95!Myst2;;chr11:5761889..5761969,+!p1@Aebp1!0.17!55.58!Aebp1;;chr2:119722948..119723028,+!p1@Mga!0.17!37.64!Mga;;chr12:100801772..100801861,-!p1@Foxn3!0.17!27.16!Foxn3;;chr6:29997979..29998049,+!p1@Nrf1!0.17!24.01!Nrf1;;chr5:53981692..53981768,+!p2@Rbpj!0.17!23.70!Rbpj;;chr13:55206651..55206701,+!p1@Zfp346!0.17!23.70!Zfp346;;chr12:3807017..3807063,+!p1@Dnmt3a!0.17!21.39!Dnmt3a;;chr5:108494715..108494757,+!p1@Mtf2!0.17!19.71!Mtf2;;chr1:33871361..33871418,-!p1@Zfp451!0.17!17.51!Zfp451;;chr4:122911086..122911112,+!p1@Heyl!0.17!14.99!Heyl;;chr1:193961776..193961815,-!p2@Rcor3!0.17!6.29!Rcor3;;chr3:95021612..95021650,-!p2@Gabpb2!0.17!6.08!Gabpb2;;chr8:72663098..72663160,-!p2@LOC100048268,p2@Rfxank!0.17!5.98!Rfxank;;chr8:72519989..72520007,-!p5@Gatad2a!0.17!5.77!Gatad2a;;chr2:92886297..92886329,-!p1@Prdm11!0.17!5.45!Prdm11;;chr9:96159665..96159680,+!p3@Tfdp2!0.17!5.35!Tfdp2;;chr19:5637501..5637517,+!p4@Rela!0.17!4.72!Rela;;
@@ Line 45: / Line 45: @@
 |is_obsolete=
 |library_id=CNhs11204
-|library_id_phase_based=1:CNhs11204
+|library_id_phase_based=2:CNhs11204
+|microRNAs=
+|microRNAs_nn=
+|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/mouse#cage;sample;763
+|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/mouse#cage;sample;763
+|mm10bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/mm10_v2/basic/mouse.tissue.hCAGE/testis%252c%2520neonate%2520N10.CNhs11204.763-44D9.mm10.nobarcode.bam
+|mm10ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/mm10_v2/basic/mouse.tissue.hCAGE/testis%252c%2520neonate%2520N10.CNhs11204.763-44D9.mm10.nobarcode.ctss.bed.gz
+|mm9bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/mouse.tissue.hCAGE/testis%252c%2520neonate%2520N10.CNhs11204.763-44D9.mm9.nobarcode.bam
+|mm9ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/mouse.tissue.hCAGE/testis%252c%2520neonate%2520N10.CNhs11204.763-44D9.mm9.ctss.bed.gz
+|mm9fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/mouse.tissue.hCAGE/testis%252c%2520neonate%2520N10.CNhs11204.763-44D9.mm9.nobarcode.rdna.fa.gz
 |name=testis, neonate N10
 |namespace=FANTOM5
@@ Line 51: / Line 60: @@
 |profile_cagescan=,,,
 |profile_hcage=CNhs11204,LSID747,release008,COMPLETED
-|profile_rnaseq=,,,
+|profile_rnaseq=
 |profile_srnaseq=,,,
 |repeat_enrich_byfamily=-0.0584024108887565,0,0.0419491689319367,0,0.0433069931089932,0.000113186433821161,0.0735928525588576,0,0.0216534965544966,0,0,0.703695276464536,0,0,0,0,0,0,0.0200693390715787,0,0,0,0,0,0,0,0,0,0,0,0,0,0.059183494629988,0,0,0.0433069931089932,0,0.0157044407217163,-0.0439481950671262,0,-0.266551592525992,-0.085446884546035,0.249553156596576,0,0,0,0,0,0,0,0,0,0,0.0826843900821455,0.373495236251454,0.145957142390713,0.0433069931089932,0,0,0,0,0,0.148650194708635,0,0,0.0337098173624283,0.0281933236862895,0.0997705897529068,0.130545810990838,0.0264029825987159,0,0.214662767582166,0.0372565533024686,0,0.183069515717335,0,0.00594118773752608,0.103113916158665,-0.262779525811809,0.104237920877427,0,0,0,0,0,0,-0.126427630498926,-0.00588046066266923,-0.0877635386465667,0.0228900101526099,0,0.0826843900821455,0,0
@@ Line 88: / Line 97: @@
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 |xref=
+|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_mouse;search_select_hide=table111:763-44D9;search_select_hide=table117:763-44D9
 }}

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FF:763-44D9: Difference between revisions

From FANTOM5_SSTAR

Latest revision as of 19:20, 4 June 2020

CNhs11204

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	Mozilla Cavendish skin modified by DaSch for the Web Community Wiki GitHub project page – Report a bug – Skin version: 2.6.0