FFCP PHASE1:Hg19::chr3:79817162..79817175,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr3:79817162..79817175,- to FFCP PHASE1:Hg19::chr3:79817162..79817175,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6091 | |EntrezGene=6091 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10249 | |HGNC=10249 | ||
|TSSclassifier=strong | |||
|UniProt=Q9Y6N7 | |UniProt=Q9Y6N7 | ||
|association_with_transcript=-103bp_to_NM_002941,uc003dqe.2_5end | |||
|cluster_id=chr3:79817162..79817175,- | |||
|coexpression_cluster_id=C2754 | |||
|description=CAGE_peak_6_at_ROBO1_5end | |||
|id=chr3:79817162..79817175,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002590;2.53e-13;3!CL:0002602;7.37e-10;2!CL:0002549;3.98e-09;2!CL:0002564;4.14e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002590,2.39e-13,3;CL:0002602,7.90e-10,2;CL:0002549,4.53e-09,2;CL:0002564,4.09e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002616!6.43e-49!59;UBERON:0005743!9.86e-47!86;UBERON:0001017!9.90e-46!82;UBERON:0000073!1.77e-44!94;UBERON:0001016!1.77e-44!94;UBERON:0001049!2.42e-43!57;UBERON:0005068!2.42e-43!57;UBERON:0006241!2.42e-43!57;UBERON:0007135!2.42e-43!57;UBERON:0000955!2.54e-43!69;UBERON:0006238!2.54e-43!69;UBERON:0003075!5.20e-39!86;UBERON:0007284!5.20e-39!86;UBERON:0002346!2.64e-38!90;UBERON:0002780!2.97e-33!41;UBERON:0001890!2.97e-33!41;UBERON:0006240!2.97e-33!41;UBERON:0003080!3.10e-32!42;UBERON:0002020!1.60e-31!34;UBERON:0003528!1.60e-31!34;UBERON:0001869!4.39e-31!32;UBERON:0001893!5.57e-31!34;UBERON:0003056!6.79e-31!61;UBERON:0000153!2.82e-30!129;UBERON:0007811!2.82e-30!129;UBERON:0002791!1.34e-29!33;UBERON:0000033!1.04e-28!123;UBERON:0000924!1.25e-26!173;UBERON:0006601!1.25e-26!173;UBERON:0004121!1.38e-26!169;UBERON:0000956!1.44e-23!25;UBERON:0000203!1.44e-23!25;UBERON:0002619!1.38e-22!22;UBERON:0001950!7.77e-20!20;UBERON:0007023!2.02e-19!115;UBERON:0003076!6.05e-12!15;UBERON:0003057!6.05e-12!15;UBERON:0002200!1.24e-11!11;UBERON:0006876!1.24e-11!11;UBERON:0000477!1.05e-10!286;UBERON:0001871!2.13e-10!7;UBERON:0004733!4.42e-10!12;UBERON:0002028!4.42e-10!12;UBERON:0007277!4.42e-10!12;UBERON:0000025!6.39e-10!194;UBERON:0005284!1.30e-09!5;UBERON:0002420!2.21e-09!9;UBERON:0007245!2.21e-09!9;UBERON:0010009!2.21e-09!9;UBERON:0010011!2.21e-09!9;UBERON:0000454!2.21e-09!9;UBERON:0000349!2.40e-09!5;UBERON:0002308!2.45e-09!9;UBERON:0000125!2.45e-09!9;UBERON:0004732!3.77e-09!13;UBERON:0000119!7.48e-09!312;UBERON:0000481!1.22e-08!347;UBERON:0000483!1.31e-08!309;UBERON:0000475!7.00e-08!365;UBERON:0002298!1.31e-07!8;UBERON:0000922!2.68e-07!612;UBERON:0000064!7.33e-07!219;UBERON:0004111!7.84e-07!241;UBERON:0000488!8.88e-07!4;UBERON:0002050!9.86e-07!605;UBERON:0005423!9.86e-07!605 | |||
|ontology_enrichment_uberon_v019=UBERON:0005284;1.03e-20;5!UBERON:0003528;1.18e-15;34!UBERON:0002020;1.18e-15;34!UBERON:0001017;8.43e-15;75!UBERON:0011135;9.64e-15;5!UBERON:0002216;9.64e-15;5!UBERON:0011134;9.64e-15;5!UBERON:0002209;9.64e-15;5!UBERON:0002213;9.64e-15;5!UBERON:0007844;9.64e-15;5!UBERON:0011138;9.64e-15;5!UBERON:0001130;9.64e-15;5!UBERON:0001066;9.64e-15;5!UBERON:0001468;9.64e-15;5!UBERON:0000349;1.38e-13;5!UBERON:0000073;2.51e-13;53!UBERON:0002616;2.51e-13;53!UBERON:0002791;3.00e-13;32!UBERON:0000955;3.32e-13;68!UBERON:0006876;4.72e-13;11!UBERON:0001869;1.17e-12;32!UBERON:0001016;1.83e-12;83!UBERON:0002780;3.14e-12;41!UBERON:0001890;3.14e-12;41!UBERON:0002420;1.11e-11;9!UBERON:0000125;1.11e-11;9!UBERON:0007245;1.11e-11;9!UBERON:0002308;1.11e-11;9!UBERON:0010009;1.11e-11;9!UBERON:0010011;1.11e-11;9!UBERON:0000454;1.11e-11;9!UBERON:0002298;4.49e-11;6!UBERON:0002619;6.70e-11;22!UBERON:0001893;1.39e-10;34!UBERON:0000369;1.70e-10;4!UBERON:0002435;1.70e-10;4!UBERON:0000204;1.70e-10;4!UBERON:0001871;5.06e-10;6!UBERON:0006444;7.37e-10;2!UBERON:0001995;7.37e-10;2!UBERON:0004715;7.37e-10;2!UBERON:0000956;1.72e-09;25!UBERON:0000203;1.72e-09;25!UBERON:0001950;3.00e-09;20!UBERON:0004905;3.16e-09;8!UBERON:0000982;3.16e-09;8!UBERON:0004770;3.16e-09;8!UBERON:0001876;3.98e-09;2!UBERON:0002148;3.98e-09;2!UBERON:0005629;3.98e-09;2!UBERON:0006331;3.98e-09;2!UBERON:0009662;3.98e-09;2!UBERON:0005358;3.98e-09;2!UBERON:0001886;3.98e-09;2!UBERON:0004086;3.98e-09;2!UBERON:0005282;3.98e-09;2!UBERON:0005281;3.98e-09;2!UBERON:0004733;2.69e-08;12!UBERON:0002028;2.69e-08;12!UBERON:0004732;1.23e-07;13!UBERON:0002242;4.14e-07;3!UBERON:0005383;5.08e-07;3!UBERON:0005382;5.08e-07;3!UBERON:0002418;7.84e-07;3!UBERON:0004755;7.84e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,9.56e-31,81;UBERON:0001016,1.69e-29,89;UBERON:0000955,3.75e-29,68;UBERON:0006238,3.75e-29,68;UBERON:0001049,4.95e-25,56;UBERON:0005068,4.95e-25,56;UBERON:0006241,4.95e-25,56;UBERON:0007135,4.95e-25,56;UBERON:0000073,2.84e-21,53;UBERON:0002616,2.84e-21,53;UBERON:0005284,1.11e-20,5;UBERON:0003075,2.24e-19,82;UBERON:0007284,2.24e-19,82;UBERON:0002346,3.05e-18,86;UBERON:0003528,4.01e-18,34;UBERON:0002020,4.01e-18,34;UBERON:0004121,3.82e-16,171;UBERON:0000924,3.82e-16,171;UBERON:0006601,3.82e-16,171;UBERON:0010371,8.72e-16,104;UBERON:0011135,1.00e-14,5;UBERON:0002216,1.00e-14,5;UBERON:0011134,1.00e-14,5;UBERON:0002209,1.00e-14,5;UBERON:0002213,1.00e-14,5;UBERON:0005856,1.00e-14,5;UBERON:0005866,1.00e-14,5;UBERON:0005863,1.00e-14,5;UBERON:0007844,1.00e-14,5;UBERON:0011138,1.00e-14,5;UBERON:0001130,1.00e-14,5;UBERON:0001066,1.00e-14,5;UBERON:0001468,1.00e-14,5;UBERON:0002780,1.01e-14,41;UBERON:0001890,1.01e-14,41;UBERON:0003080,1.01e-14,41;UBERON:0006240,1.01e-14,41;UBERON:0011216,4.68e-14,223;UBERON:0000349,5.54e-14,5;UBERON:0002791,7.32e-14,32;UBERON:0001869,7.32e-14,32;UBERON:0006876,4.29e-13,11;UBERON:0001893,6.14e-13,34;UBERON:0010314,1.46e-12,132;UBERON:0003076,2.18e-12,15;UBERON:0003057,2.18e-12,15;UBERON:0003056,3.00e-12,61;UBERON:0002420,6.10e-12,9;UBERON:0007245,6.10e-12,9;UBERON:0010009,6.10e-12,9;UBERON:0010011,6.10e-12,9;UBERON:0000454,6.10e-12,9;UBERON:0000125,7.33e-12,9;UBERON:0002308,7.33e-12,9;UBERON:0002619,6.50e-11,22;UBERON:0002298,6.57e-11,6;UBERON:0000369,1.11e-10,4;UBERON:0002435,1.11e-10,4;UBERON:0000204,1.11e-10,4;UBERON:0010082,1.11e-10,4;UBERON:0001871,3.56e-10,6;UBERON:0006444,7.90e-10,2;UBERON:0001995,7.90e-10,2;UBERON:0004715,7.90e-10,2;UBERON:0000956,1.68e-09,25;UBERON:0000203,1.68e-09,25;UBERON:0001876,2.31e-09,2;UBERON:0001950,2.97e-09,20;UBERON:0004905,3.24e-09,8;UBERON:0000982,3.24e-09,8;UBERON:0004770,3.24e-09,8;UBERON:0002148,3.24e-09,2;UBERON:0006331,3.24e-09,2;UBERON:0009662,3.24e-09,2;UBERON:0005629,4.53e-09,2;UBERON:0005358,4.53e-09,2;UBERON:0001886,4.53e-09,2;UBERON:0004086,4.53e-09,2;UBERON:0005282,4.53e-09,2;UBERON:0005281,4.53e-09,2;UBERON:0004733,3.67e-08,12;UBERON:0002028,3.67e-08,12;UBERON:0007277,3.67e-08,12;UBERON:0004732,1.63e-07,13;UBERON:0002242,4.09e-07,3;UBERON:0003068,4.09e-07,3;UBERON:0002328,4.09e-07,3;UBERON:0004880,4.09e-07,3;UBERON:0005383,5.02e-07,3;UBERON:0005382,5.02e-07,3;UBERON:0002418,8.21e-07,3;UBERON:0004755,8.21e-07,3;UBERON:0002114,9.74e-07,2 | |||
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| ||
|short_description=p6@ROBO1 | |||
}} | }} |
Latest revision as of 16:51, 19 September 2015
Short description: | p6@ROBO1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_ROBO1_5end |
Coexpression cluster: | C2754_temporal_duodenum_nonsmall_occipital_parietal_Nucleus_putamen |
Association with transcript: | -103bp_to_NM_002941, uc003dqe.2_5end |
EntrezGene: | ROBO1 |
HGNC: | 10249 |
UniProt: | Q9Y6N7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the brain vasculature | 2.39e-13 | 3 |
annulus pulposus cell | 7.90e-10 | 2 |
fibroblast of choroid plexus | 4.53e-09 | 2 |
nucleus pulposus cell of intervertebral disc | 4.09e-07 | 3 |