FFCP PHASE1:Mm9::chr7:31076935..31076958,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr7:31076935..31076958,+ to FFCP PHASE1:Mm9::chr7:31076935..31076958,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=76686 | |EntrezGene=76686 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1330 | |||
|TSSclassifier=NA | |||
|UniProt=D3Z2W8 | |UniProt=D3Z2W8 | ||
|association_with_transcript=-18bp_to_ENSMUST00000144508_5end | |||
|cluster_id=chr7:31076935..31076958,+ | |||
|description=CAGE_peak_2_at_Clip3_5end | |||
|id=chr7:31076935..31076958,+ | |||
|ontology_enrichment_celltype=CL:0002319!9.28e-20!43;CL:0000221!1.02e-19!44;CL:0000133!1.02e-19!44;CL:0000055!2.62e-17!50;CL:0000540!2.99e-14!33;CL:0000047!2.99e-14!33;CL:0000031!2.99e-14!33;CL:0000404!2.99e-14!33;CL:0000393!7.93e-13!39;CL:0000211!7.93e-13!39;CL:0000117!3.55e-11!23;CL:0000337!3.55e-11!23;CL:0002453!9.77e-07!8 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,5.31e-26,43;CL:0000221,4.13e-25,44;CL:0000133,4.13e-25,44;CL:0000540,2.42e-19,33;CL:0000047,2.42e-19,33;CL:0000031,2.42e-19,33;CL:0000404,2.42e-19,33;CL:0000393,5.16e-17,39;CL:0000211,5.16e-17,39;CL:0000117,5.57e-16,23;CL:0000337,5.57e-16,23;CL:0002321,1.24e-12,70;CL:0002453,7.05e-10,8;CL:0000128,1.39e-07,6;CL:0000126,1.39e-07,6;CL:0000127,1.39e-07,6;CL:0000333,2.04e-07,10;CL:0000095,2.04e-07,10;CL:0000243,2.04e-07,10;CL:0000123,2.04e-07,10;CL:0000125,2.04e-07,10;CL:0000030,2.04e-07,10;CL:0000339,2.04e-07,10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!2.80e-36!75;UBERON:0001016!2.80e-36!75;UBERON:0001017!3.90e-36!73;UBERON:0005743!3.90e-36!73;UBERON:0004121!1.32e-31!102;UBERON:0000924!1.32e-31!102;UBERON:0006601!1.32e-31!102;UBERON:0002346!1.04e-26!71;UBERON:0003075!1.04e-26!71;UBERON:0007284!1.04e-26!71;UBERON:0001049!1.43e-25!52;UBERON:0005068!1.43e-25!52;UBERON:0006241!1.43e-25!52;UBERON:0007135!1.43e-25!52;UBERON:0000955!2.69e-24!50;UBERON:0006238!2.69e-24!50;UBERON:0000033!6.40e-24!63;UBERON:0002616!1.56e-23!49;UBERON:0003056!3.81e-19!49;UBERON:0002020!5.24e-19!34;UBERON:0003080!2.19e-17!40;UBERON:0002780!7.30e-17!39;UBERON:0001890!7.30e-17!39;UBERON:0006240!7.30e-17!39;UBERON:0002791!5.36e-16!29;UBERON:0003528!5.36e-16!29;UBERON:0001893!5.36e-16!29;UBERON:0000956!1.86e-12!21;UBERON:0001869!1.86e-12!21;UBERON:0000203!1.86e-12!21;UBERON:0000153!8.23e-12!94;UBERON:0002619!1.58e-10!17;UBERON:0007811!2.25e-10!86;UBERON:0003076!6.70e-09!12;UBERON:0003057!6.70e-09!12;UBERON:0002021!7.57e-07!10;UBERON:0000411!7.57e-07!10;UBERON:0001950!7.57e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.09e-51,73;UBERON:0001016,2.74e-49,75;UBERON:0004121,3.03e-41,95;UBERON:0000924,3.03e-41,95;UBERON:0006601,3.03e-41,95;UBERON:0002346,2.61e-39,64;UBERON:0003075,2.61e-39,64;UBERON:0007284,2.61e-39,64;UBERON:0000073,2.78e-39,54;UBERON:0001049,2.34e-37,52;UBERON:0005068,2.34e-37,52;UBERON:0006241,2.34e-37,52;UBERON:0007135,2.34e-37,52;UBERON:0000955,2.86e-32,47;UBERON:0006238,2.86e-32,47;UBERON:0010371,3.85e-32,73;UBERON:0002616,4.36e-31,46;UBERON:0002020,1.37e-29,34;UBERON:0003528,9.64e-25,29;UBERON:0002791,9.64e-25,29;UBERON:0001893,9.64e-25,29;UBERON:0003080,1.96e-24,40;UBERON:0003056,3.05e-24,49;UBERON:0002780,1.32e-23,39;UBERON:0001890,1.32e-23,39;UBERON:0006240,1.32e-23,39;UBERON:0010314,1.28e-22,92;UBERON:0000956,4.77e-19,21;UBERON:0001869,4.77e-19,21;UBERON:0000203,4.77e-19,21;UBERON:0002619,6.01e-16,17;UBERON:0003076,2.44e-13,12;UBERON:0003057,2.44e-13,12;UBERON:0000025,2.25e-10,114;UBERON:0002021,4.69e-10,10;UBERON:0000411,4.69e-10,10;UBERON:0001950,4.69e-10,10;UBERON:0004111,9.48e-09,122;UBERON:0004733,7.68e-08,6;UBERON:0004732,7.68e-08,6;UBERON:0002028,7.68e-08,6;UBERON:0007277,7.68e-08,6;UBERON:0001954,2.56e-07,7;UBERON:0003022,2.56e-07,7;UBERON:0002421,2.56e-07,7;UBERON:0000349,2.56e-07,7;UBERON:0002600,2.56e-07,7;UBERON:0002240,5.00e-07,6;UBERON:0005174,5.00e-07,6;UBERON:0001137,5.00e-07,6;UBERON:0002420,7.79e-07,8;UBERON:0007245,7.79e-07,8;UBERON:0010009,7.79e-07,8;UBERON:0010011,7.79e-07,8;UBERON:0000454,7.79e-07,8;UBERON:0011216,9.93e-07,194 | |||
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| ||
|short_description=p2@Clip3 | |||
}} | }} |
Latest revision as of 14:21, 26 September 2015
Short description: | p2@Clip3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Clip3_5end |
Coexpression cluster: | MCL_coexpression_mm9:1330 |
Association with transcript: | -18bp_to_ENSMUST00000144508_5end |
EntrezGene: | Clip3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 5.31e-26 | 43 |
ectodermal cell | 4.13e-25 | 44 |
neurectodermal cell | 4.13e-25 | 44 |
neuron | 2.42e-19 | 33 |
neuronal stem cell | 2.42e-19 | 33 |
neuroblast | 2.42e-19 | 33 |
electrically signaling cell | 2.42e-19 | 33 |
electrically responsive cell | 5.16e-17 | 39 |
electrically active cell | 5.16e-17 | 39 |
CNS neuron (sensu Vertebrata) | 5.57e-16 | 23 |
neuroblast (sensu Vertebrata) | 5.57e-16 | 23 |
embryonic cell | 1.24e-12 | 70 |
oligodendrocyte precursor cell | 7.05e-10 | 8 |
oligodendrocyte | 1.39e-07 | 6 |
macroglial cell | 1.39e-07 | 6 |
astrocyte | 1.39e-07 | 6 |
migratory neural crest cell | 2.04e-07 | 10 |
neuron associated cell | 2.04e-07 | 10 |
glial cell (sensu Vertebrata) | 2.04e-07 | 10 |
neuron associated cell (sensu Vertebrata) | 2.04e-07 | 10 |
glial cell | 2.04e-07 | 10 |
glioblast | 2.04e-07 | 10 |
glioblast (sensu Vertebrata) | 2.04e-07 | 10 |