FFCP PHASE1:Mm9::chr4:150513630..150513686,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=100072|HGNC=|MCL_coexpression_id=251|UniProt=|association_with_transcript=6bp_to_ENSMUST00000143434_5end|description=CAGE_peak_4_at_Camta1_5end|id=chr4:150513630..150513686,-|ontology_enrichment_celltype=CL:0000540!3.83e-12!33;CL:0000047!3.83e-12!33;CL:0000031!3.83e-12!33;CL:0000404!3.83e-12!33;CL:0000117!5.92e-10!23;CL:0000337!5.92e-10!23;CL:0000393!3.78e-08!39;CL:0000211!3.78e-08!39;CL:0000221!5.61e-08!44;CL:0000133!5.61e-08!44;CL:0002319!5.70e-08!43|ontology_enrichment_celltype_v019_2=CL:0000117,2.28e-19,23;CL:0000337,2.28e-19,23;CL:0000540,4.05e-16,33;CL:0000047,4.05e-16,33;CL:0000031,4.05e-16,33;CL:0000404,4.05e-16,33;CL:0000393,1.14e-12,39;CL:0000211,1.14e-12,39;CL:0002319,5.02e-12,43;CL:0000221,1.31e-11,44;CL:0000133,1.31e-11,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!2.75e-30!102;UBERON:0000924!2.75e-30!102;UBERON:0006601!2.75e-30!102;UBERON:0001017!3.61e-26!73;UBERON:0005743!3.61e-26!73;UBERON:0002346!4.30e-25!71;UBERON:0003075!4.30e-25!71;UBERON:0007284!4.30e-25!71;UBERON:0000073!1.47e-24!75;UBERON:0001016!1.47e-24!75;UBERON:0000033!1.72e-21!63;UBERON:0001049!1.20e-19!52;UBERON:0005068!1.20e-19!52;UBERON:0006241!1.20e-19!52;UBERON:0007135!1.20e-19!52;UBERON:0000955!7.35e-19!50;UBERON:0006238!7.35e-19!50;UBERON:0002616!4.39e-18!49;UBERON:0003056!7.69e-18!49;UBERON:0003080!8.71e-15!40;UBERON:0002780!4.67e-14!39;UBERON:0001890!4.67e-14!39;UBERON:0006240!4.67e-14!39;UBERON:0002020!2.71e-13!34;UBERON:0002791!1.89e-10!29;UBERON:0003528!1.89e-10!29;UBERON:0001893!1.89e-10!29;UBERON:0007811!5.25e-10!86;UBERON:0000153!2.41e-08!94;UBERON:0002021!8.05e-07!10;UBERON:0000411!8.05e-07!10;UBERON:0001950!8.05e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0001017,5.58e-38,73;UBERON:0004121,1.77e-37,95;UBERON:0000924,1.77e-37,95;UBERON:0006601,1.77e-37,95;UBERON:0001016,1.32e-36,75;UBERON:0000073,2.63e-35,54;UBERON:0001049,2.81e-32,52;UBERON:0005068,2.81e-32,52;UBERON:0006241,2.81e-32,52;UBERON:0007135,2.81e-32,52;UBERON:0002346,6.42e-32,64;UBERON:0003075,6.42e-32,64;UBERON:0007284,6.42e-32,64;UBERON:0010371,6.62e-31,73;UBERON:0000955,1.63e-26,47;UBERON:0006238,1.63e-26,47;UBERON:0002616,4.51e-25,46;UBERON:0002020,6.85e-24,34;UBERON:0003056,1.70e-21,49;UBERON:0003080,2.87e-21,40;UBERON:0002780,6.54e-20,39;UBERON:0001890,6.54e-20,39;UBERON:0006240,6.54e-20,39;UBERON:0010314,1.21e-19,92;UBERON:0003528,3.80e-18,29;UBERON:0002791,3.80e-18,29;UBERON:0001893,3.80e-18,29;UBERON:0002420,7.29e-12,8;UBERON:0007245,7.29e-12,8;UBERON:0010009,7.29e-12,8;UBERON:0010011,7.29e-12,8;UBERON:0000454,7.29e-12,8;UBERON:0003076,1.38e-11,12;UBERON:0003057,1.38e-11,12;UBERON:0002021,6.57e-11,10;UBERON:0000411,6.57e-11,10;UBERON:0001950,6.57e-11,10;UBERON:0002619,5.73e-10,17;UBERON:0000956,4.20e-09,21;UBERON:0001869,4.20e-09,21;UBERON:0000203,4.20e-09,21;UBERON:0004111,5.17e-09,122;UBERON:0000025,6.02e-09,114;UBERON:0002240,1.27e-08,6;UBERON:0005174,1.27e-08,6;UBERON:0001137,1.27e-08,6;UBERON:0002950,1.39e-07,4;UBERON:0001891,1.39e-07,4;UBERON:0009616,1.39e-07,4;UBERON:0010286,1.39e-07,4;UBERON:0000369,1.90e-07,5;UBERON:0002435,1.90e-07,5;UBERON:0000204,1.90e-07,5;UBERON:0010082,1.90e-07,5;UBERON:0001948,2.46e-07,5;UBERON:0002315,2.46e-07,5;UBERON:0011216,2.88e-07,194|phase1_expression=0.160148847104794,0.348975407639361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.74190476664707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0,1.43752564364972,0,0,0,0,0,0,2.83243045203437,1.5869729378161,5.70448263155561,0,0,0,0,0,0,0.384218305321555,0.103689612308478,0.270011876663381,0,3.42781181284564,4.8591079009355,1.71487118900936,1.24599112323707,0,22.0231761998777,10.214987046815,14.2854075928306,6.4624280987795,5.03182039813253,5.2091337055676,13.959149950069,16.8828783009504,14.0574387954665,7.95497180778903,4.8406371471695,2.98239113320481,0,0,0,0,0,0,0,0,1.40444420131752,0,0,0,0.281686839553361,0,0,0,0,0,0,0.22836775943812,0,0.742210695324124,0.346970653532272,0.304465478312141,0.461230994512117,0.753613202763113,0.705532242814229,0.376999773989026,0,0,0,0.161766849947409,0,0.484875253135222,0,43.9171195517321,21.154117388159,0,0,0,0,23.2175491077475,7.77751024791665,2.51308704225729,11.8200537730748,8.95004100656157,16.4152555202052,10.2211995732687,0.305518091550949,0.124406970610093,0,0.631325567659422,0.910843100738926,0.459804208866946,0.540186389416048,0.753524089178575,2.04109497453984,2.43416068541215,1.03071897015702,1.55222022443409,0.215567992932842,0,0,0,0.278047249225598,0.348252166522167,0,0.59710280045548,0,0,0,0,0.469052119962192,0.180062061461015,0.23674473558521,0.196764231747404,0.308534225774757,0.232533944750408,0.268273401399619,0.934122738937356,0.493679549740441,0.985004784474571,0.405344047729279,0.438599962275997,0,0.134206418760372,13.6688466566683,0.617427674275707,0,0,0,0.696710015581316,0.644337306610467,0.201683524623343,0,0,0,0.164698954724011,0.251335208800269,0.198956472041151,0.38992817423824,0,0,0,0.189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| ||
|EntrezGene=100072 | |||
|HGNC= | |||
|MCL_coexpression_id=251 | |||
|UniProt= | |||
|association_with_transcript=6bp_to_ENSMUST00000143434_5end | |||
|description=CAGE_peak_4_at_Camta1_5end | |||
|id=chr4:150513630..150513686,- | |||
|ontology_enrichment_celltype=CL:0000540!3.83e-12!33;CL:0000047!3.83e-12!33;CL:0000031!3.83e-12!33;CL:0000404!3.83e-12!33;CL:0000117!5.92e-10!23;CL:0000337!5.92e-10!23;CL:0000393!3.78e-08!39;CL:0000211!3.78e-08!39;CL:0000221!5.61e-08!44;CL:0000133!5.61e-08!44;CL:0002319!5.70e-08!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.28e-19,23;CL:0000337,2.28e-19,23;CL:0000540,4.05e-16,33;CL:0000047,4.05e-16,33;CL:0000031,4.05e-16,33;CL:0000404,4.05e-16,33;CL:0000393,1.14e-12,39;CL:0000211,1.14e-12,39;CL:0002319,5.02e-12,43;CL:0000221,1.31e-11,44;CL:0000133,1.31e-11,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!2.75e-30!102;UBERON:0000924!2.75e-30!102;UBERON:0006601!2.75e-30!102;UBERON:0001017!3.61e-26!73;UBERON:0005743!3.61e-26!73;UBERON:0002346!4.30e-25!71;UBERON:0003075!4.30e-25!71;UBERON:0007284!4.30e-25!71;UBERON:0000073!1.47e-24!75;UBERON:0001016!1.47e-24!75;UBERON:0000033!1.72e-21!63;UBERON:0001049!1.20e-19!52;UBERON:0005068!1.20e-19!52;UBERON:0006241!1.20e-19!52;UBERON:0007135!1.20e-19!52;UBERON:0000955!7.35e-19!50;UBERON:0006238!7.35e-19!50;UBERON:0002616!4.39e-18!49;UBERON:0003056!7.69e-18!49;UBERON:0003080!8.71e-15!40;UBERON:0002780!4.67e-14!39;UBERON:0001890!4.67e-14!39;UBERON:0006240!4.67e-14!39;UBERON:0002020!2.71e-13!34;UBERON:0002791!1.89e-10!29;UBERON:0003528!1.89e-10!29;UBERON:0001893!1.89e-10!29;UBERON:0007811!5.25e-10!86;UBERON:0000153!2.41e-08!94;UBERON:0002021!8.05e-07!10;UBERON:0000411!8.05e-07!10;UBERON:0001950!8.05e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,5.58e-38,73;UBERON:0004121,1.77e-37,95;UBERON:0000924,1.77e-37,95;UBERON:0006601,1.77e-37,95;UBERON:0001016,1.32e-36,75;UBERON:0000073,2.63e-35,54;UBERON:0001049,2.81e-32,52;UBERON:0005068,2.81e-32,52;UBERON:0006241,2.81e-32,52;UBERON:0007135,2.81e-32,52;UBERON:0002346,6.42e-32,64;UBERON:0003075,6.42e-32,64;UBERON:0007284,6.42e-32,64;UBERON:0010371,6.62e-31,73;UBERON:0000955,1.63e-26,47;UBERON:0006238,1.63e-26,47;UBERON:0002616,4.51e-25,46;UBERON:0002020,6.85e-24,34;UBERON:0003056,1.70e-21,49;UBERON:0003080,2.87e-21,40;UBERON:0002780,6.54e-20,39;UBERON:0001890,6.54e-20,39;UBERON:0006240,6.54e-20,39;UBERON:0010314,1.21e-19,92;UBERON:0003528,3.80e-18,29;UBERON:0002791,3.80e-18,29;UBERON:0001893,3.80e-18,29;UBERON:0002420,7.29e-12,8;UBERON:0007245,7.29e-12,8;UBERON:0010009,7.29e-12,8;UBERON:0010011,7.29e-12,8;UBERON:0000454,7.29e-12,8;UBERON:0003076,1.38e-11,12;UBERON:0003057,1.38e-11,12;UBERON:0002021,6.57e-11,10;UBERON:0000411,6.57e-11,10;UBERON:0001950,6.57e-11,10;UBERON:0002619,5.73e-10,17;UBERON:0000956,4.20e-09,21;UBERON:0001869,4.20e-09,21;UBERON:0000203,4.20e-09,21;UBERON:0004111,5.17e-09,122;UBERON:0000025,6.02e-09,114;UBERON:0002240,1.27e-08,6;UBERON:0005174,1.27e-08,6;UBERON:0001137,1.27e-08,6;UBERON:0002950,1.39e-07,4;UBERON:0001891,1.39e-07,4;UBERON:0009616,1.39e-07,4;UBERON:0010286,1.39e-07,4;UBERON:0000369,1.90e-07,5;UBERON:0002435,1.90e-07,5;UBERON:0000204,1.90e-07,5;UBERON:0010082,1.90e-07,5;UBERON:0001948,2.46e-07,5;UBERON:0002315,2.46e-07,5;UBERON:0011216,2.88e-07,194 | |||
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|short_description=p4@Camta1 | |||
}} |
Revision as of 04:33, 14 September 2013
Short description: | p4@Camta1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Camta1_5end |
Coexpression cluster: | MCL_coexpression_mm9:251 |
Association with transcript: | 6bp_to_ENSMUST00000143434_5end |
EntrezGene: | Camta1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.28e-19 | 23 |
neuroblast (sensu Vertebrata) | 2.28e-19 | 23 |
neuron | 4.05e-16 | 33 |
neuronal stem cell | 4.05e-16 | 33 |
neuroblast | 4.05e-16 | 33 |
electrically signaling cell | 4.05e-16 | 33 |
electrically responsive cell | 1.14e-12 | 39 |
electrically active cell | 1.14e-12 | 39 |
neural cell | 5.02e-12 | 43 |
ectodermal cell | 1.31e-11 | 44 |
neurectodermal cell | 1.31e-11 | 44 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.