FFCP PHASE1:Hg19::chr4:114900781..114900830,-: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=79642 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26286 | |||
|TSSclassifier=S | |||
|UniProt=D6RGC1 | |||
|association_with_transcript=0bp_to_ENST00000509829,uc010imv.1_5end | |||
|coexpression_cluster_id=C4362 | |||
|description=CAGE_peak_1_at_ARSJ_5end | |||
|id=chr4:114900781..114900830,- | |||
|ontology_enrichment_celltype=CL:0000055!7.98e-37!180;CL:0000222!9.70e-27!119;CL:0000220!1.37e-24!246;CL:0002321!4.72e-24!248;CL:0000680!9.25e-22!57;CL:0000056!9.25e-22!57;CL:0000355!9.25e-22!57;CL:0000187!1.27e-20!54;CL:0000183!3.52e-20!59;CL:0000192!1.45e-19!42;CL:0000514!1.45e-19!42;CL:0000057!4.83e-19!75;CL:0000359!3.80e-18!32;CL:0000393!8.65e-18!60;CL:0000211!8.65e-18!60;CL:0002620!1.76e-10!23;CL:0002371!2.53e-09!591;CL:0000548!8.56e-09!679;CL:0000004!8.56e-09!679;CL:0000255!8.56e-09!679;CL:0002139!1.61e-08!24;CL:0000012!2.91e-08!682;CL:0000144!1.89e-07!625;CL:0000115!2.09e-07!35;CL:0000071!3.12e-07!18;CL:0002546!3.12e-07!18;CL:0002078!3.70e-07!44;CL:0002539!3.97e-07!10 | |||
|ontology_enrichment_celltype_v019=CL:0000359;1.55e-17;32!CL:0000192;3.08e-15;43!CL:0000187;4.94e-12;55!CL:0002620;7.97e-11;23!CL:0000393;1.34e-09;61!CL:0000211;1.34e-09;61!CL:0002139;1.01e-08;24!CL:0000057;1.03e-08;73!CL:0000071;1.92e-07;18!CL:0002539;2.32e-07;10!CL:0000115;3.92e-07;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,2.32e-28,121;CL:0002321,8.36e-25,250;CL:0000680,6.30e-23,58;CL:0000056,6.30e-23,58;CL:0000355,6.30e-23,58;CL:0000187,9.62e-22,55;CL:0000192,1.24e-20,43;CL:0000514,1.24e-20,43;CL:0000057,1.81e-20,76;CL:0000359,8.73e-19,32;CL:0000393,1.85e-18,61;CL:0000211,1.85e-18,61;CL:0002620,7.99e-11,23;CL:0002139,8.67e-09,24;CL:0000115,3.24e-08,36;CL:0002078,5.64e-08,45;CL:0000071,1.88e-07,18;CL:0002546,1.88e-07,18;CL:0002539,2.42e-07,10;CL:0000213,5.97e-07,58;CL:0000215,5.97e-07,58 | |||
|ontology_enrichment_development_v019=CL:0000514;3.08e-15;43!CL:0000355;3.12e-12;58!CL:0000222;1.09e-07;121!CL:0002546;1.92e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!4.69e-30!79;UBERON:0007798!4.69e-30!79;UBERON:0000055!4.96e-27!69;UBERON:0001981!4.85e-26!60;UBERON:0007500!4.85e-26!60;UBERON:0004537!4.85e-26!60;UBERON:0006965!4.85e-26!60;UBERON:0004872!6.55e-26!84;UBERON:0000914!7.53e-26!83;UBERON:0002329!7.53e-26!83;UBERON:0003077!7.53e-26!83;UBERON:0003059!7.53e-26!83;UBERON:0007282!7.53e-26!83;UBERON:0009618!7.53e-26!83;UBERON:0007285!7.53e-26!83;UBERON:0005256!3.39e-25!143;UBERON:0003914!1.14e-24!118;UBERON:0000475!1.20e-23!365;UBERON:0000490!5.99e-23!138;UBERON:0001637!6.15e-23!42;UBERON:0003509!6.15e-23!42;UBERON:0004572!6.15e-23!42;UBERON:0000119!2.71e-22!312;UBERON:0000483!3.28e-22!309;UBERON:0004290!7.67e-22!70;UBERON:0000486!2.09e-21!82;UBERON:0000481!3.89e-21!347;UBERON:0004535!1.26e-20!110;UBERON:0000477!3.80e-20!286;UBERON:0001009!1.50e-19!113;UBERON:0002100!1.61e-19!216;UBERON:0001134!1.64e-19!61;UBERON:0002036!1.64e-19!61;UBERON:0003082!1.64e-19!61;UBERON:0002385!6.06e-19!63;UBERON:0001015!6.06e-19!63;UBERON:0000383!6.06e-19!63;UBERON:0004573!1.13e-18!33;UBERON:0004571!1.13e-18!33;UBERON:0003104!1.14e-18!238;UBERON:0009142!1.14e-18!238;UBERON:0004111!2.98e-17!241;UBERON:0000468!3.26e-17!659;UBERON:0000467!4.72e-16!625;UBERON:0000480!9.25e-16!626;UBERON:0003102!3.25e-15!95;UBERON:0000025!1.06e-11!194;UBERON:0000947!1.25e-11!21;UBERON:0010191!1.25e-11!21;UBERON:0002050!3.96e-10!605;UBERON:0005423!3.96e-10!605;UBERON:0000923!5.18e-10!604;UBERON:0005291!5.18e-10!604;UBERON:0006598!5.18e-10!604;UBERON:0002532!5.18e-10!604;UBERON:0000922!2.68e-09!612;UBERON:0002097!1.86e-08!40;UBERON:0002199!2.64e-08!45;UBERON:0002416!2.64e-08!45;UBERON:0000926!5.66e-08!448;UBERON:0004120!5.66e-08!448;UBERON:0006603!5.66e-08!448;UBERON:0001986!3.12e-07!18;UBERON:0004638!3.12e-07!18;UBERON:0004852!3.12e-07!18;UBERON:0000487!3.30e-07!22;UBERON:0004237!3.97e-07!10;UBERON:0004695!3.97e-07!10;UBERON:0002111!3.97e-07!10;UBERON:0004178!3.97e-07!10;UBERON:0001135!4.66e-07!15 | |||
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| |||
|short_description=p1@ARSJ | |||
}} |
Revision as of 02:08, 13 September 2013
Short description: | p1@ARSJ |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ARSJ_5end |
Coexpression cluster: | C4362_Multipotent_bone_basal_amniotic_Myoblast_Nucleus_Smooth |
Association with transcript: | 0bp_to_ENST00000509829, uc010imv.1_5end |
EntrezGene: | ARSJ |
HGNC: | 26286 |
UniProt: | D6RGC1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 2.32e-28 | 121 |
embryonic cell | 8.36e-25 | 250 |
muscle precursor cell | 6.30e-23 | 58 |
myoblast | 6.30e-23 | 58 |
multi-potent skeletal muscle stem cell | 6.30e-23 | 58 |
muscle cell | 9.62e-22 | 55 |
smooth muscle cell | 1.24e-20 | 43 |
smooth muscle myoblast | 1.24e-20 | 43 |
fibroblast | 1.81e-20 | 76 |
vascular associated smooth muscle cell | 8.73e-19 | 32 |
electrically responsive cell | 1.85e-18 | 61 |
electrically active cell | 1.85e-18 | 61 |
skin fibroblast | 7.99e-11 | 23 |
endothelial cell of vascular tree | 8.67e-09 | 24 |
endothelial cell | 3.24e-08 | 36 |
meso-epithelial cell | 5.64e-08 | 45 |
blood vessel endothelial cell | 1.88e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.88e-07 | 18 |
aortic smooth muscle cell | 2.42e-07 | 10 |
lining cell | 5.97e-07 | 58 |
barrier cell | 5.97e-07 | 58 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.