FFCP PHASE1:Hg19::chr22:21138313..21138336,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C2639 | |||
|description=CAGE_peak_at_chr22:21138313..21138336,+ | |||
|id=chr22:21138313..21138336,+ | |||
|ontology_enrichment_celltype=CL:0000359!6.48e-30!32;CL:0000192!9.55e-23!42;CL:0000514!9.55e-23!42;CL:0000183!2.46e-19!59;CL:0000187!1.05e-18!54;CL:0000680!1.14e-18!57;CL:0000056!1.14e-18!57;CL:0000355!1.14e-18!57;CL:0000222!4.84e-18!119;CL:0000393!5.53e-16!60;CL:0000211!5.53e-16!60;CL:0000071!1.09e-12!18;CL:0002546!1.09e-12!18;CL:0000220!2.56e-12!246;CL:0002321!4.36e-12!248;CL:0002539!5.13e-12!10;CL:0002139!7.63e-12!24;CL:0000055!1.69e-10!180;CL:0002595!7.30e-10!5;CL:0002371!1.67e-08!591;CL:0002594!2.17e-08!4;CL:0000144!1.34e-07!625;CL:1000413!1.81e-07!9;CL:0002543!1.92e-07!6;CL:0002592!4.34e-07!3;CL:0000115!5.63e-07!35;CL:0000548!9.07e-07!679;CL:0000004!9.07e-07!679;CL:0000255!9.07e-07!679 | |||
|ontology_enrichment_celltype_v019=CL:0000359;2.84e-50;32!CL:0000192;4.18e-28;43!CL:0002539;1.25e-26;10!CL:0000071;1.56e-22;18!CL:1000413;7.63e-21;9!CL:0002592;8.42e-18;3!CL:0002139;1.57e-16;24!CL:0000187;1.85e-13;55!CL:0000393;7.59e-13;61!CL:0000211;7.59e-13;61!CL:0002593;5.84e-12;2!CL:0002596;6.89e-12;2!CL:0000115;8.43e-12;36!CL:0002595;1.70e-10;5!CL:0002544;1.92e-08;6!CL:0002078;2.75e-07;45 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,8.30e-53,32;CL:0000192,2.83e-38,43;CL:0000514,2.83e-38,43;CL:0000222,6.58e-30,121;CL:0000187,4.77e-29,55;CL:0000680,2.45e-27,58;CL:0000056,2.45e-27,58;CL:0000355,2.45e-27,58;CL:0002539,1.30e-26,10;CL:0000393,8.52e-26,61;CL:0000211,8.52e-26,61;CL:0000071,1.56e-22,18;CL:0002546,1.56e-22,18;CL:1000413,8.80e-21,9;CL:0002592,9.17e-18,3;CL:0002139,1.57e-16,24;CL:0002321,5.36e-16,250;CL:0000115,5.29e-13,36;CL:0002596,4.95e-12,2;CL:0002593,5.23e-12,2;CL:0002595,1.57e-10,5;CL:0002078,4.74e-10,45;CL:0002544,2.22e-08,6;CL:0000213,2.06e-07,58;CL:0000215,2.06e-07,58 | |||
|ontology_enrichment_development_v019=CL:0000514;4.18e-28;43!CL:0002546;1.56e-22;18!CL:0000355;2.89e-13;58 | |||
|ontology_enrichment_disease=DOID:2394!6.49e-07!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001637!4.60e-37!42;UBERON:0003509!4.60e-37!42;UBERON:0004572!4.60e-37!42;UBERON:0001981!3.03e-34!60;UBERON:0007500!3.03e-34!60;UBERON:0004537!3.03e-34!60;UBERON:0006965!3.03e-34!60;UBERON:0000055!1.49e-31!69;UBERON:0004872!3.90e-28!84;UBERON:0002049!2.21e-27!79;UBERON:0007798!2.21e-27!79;UBERON:0004573!4.78e-26!33;UBERON:0004571!4.78e-26!33;UBERON:0003914!2.34e-25!118;UBERON:0000490!1.19e-23!138;UBERON:0004535!1.15e-21!110;UBERON:0001009!1.00e-20!113;UBERON:0000914!2.09e-17!83;UBERON:0002329!2.09e-17!83;UBERON:0003077!2.09e-17!83;UBERON:0003059!2.09e-17!83;UBERON:0007282!2.09e-17!83;UBERON:0009618!2.09e-17!83;UBERON:0007285!2.09e-17!83;UBERON:0001134!7.24e-17!61;UBERON:0002036!7.24e-17!61;UBERON:0003082!7.24e-17!61;UBERON:0002385!4.69e-16!63;UBERON:0001015!4.69e-16!63;UBERON:0000383!4.69e-16!63;UBERON:0004290!6.81e-16!70;UBERON:0000486!2.75e-14!82;UBERON:0001986!1.09e-12!18;UBERON:0004638!1.09e-12!18;UBERON:0004852!1.09e-12!18;UBERON:0000025!2.62e-12!194;UBERON:0005256!4.35e-12!143;UBERON:0004237!5.13e-12!10;UBERON:0004695!5.13e-12!10;UBERON:0002111!5.13e-12!10;UBERON:0004178!5.13e-12!10;UBERON:0000487!1.82e-11!22;UBERON:0004111!5.27e-11!241;UBERON:0003834!7.30e-10!5;UBERON:0001533!7.30e-10!5;UBERON:0000477!7.78e-10!286;UBERON:0006914!1.13e-09!25;UBERON:0000947!3.13e-09!21;UBERON:0010191!3.13e-09!21;UBERON:0000119!1.03e-08!312;UBERON:0001310!2.17e-08!4;UBERON:0000483!5.20e-08!309;UBERON:0003915!1.81e-07!9;UBERON:0004700!1.81e-07!9;UBERON:0001917!1.81e-07!9;UBERON:0001135!2.17e-07!15;UBERON:0002100!3.36e-07!216;UBERON:0001621!4.34e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;1.04e-52;42!UBERON:0003509;1.04e-52;42!UBERON:0004572;1.04e-52;42!UBERON:0004573;4.39e-50;33!UBERON:0004571;4.39e-50;33!UBERON:0007500;6.87e-32;56!UBERON:0001981;6.87e-32;56!UBERON:0004537;6.87e-32;56!UBERON:0004237;1.25e-26;10!UBERON:0004695;1.25e-26;10!UBERON:0002111;1.25e-26;10!UBERON:0004178;1.25e-26;10!UBERON:0000947;2.56e-24;21!UBERON:0010191;2.56e-24;21!UBERON:0000055;5.31e-23;65!UBERON:0004638;1.56e-22;18!UBERON:0001986;1.56e-22;18!UBERON:0004852;1.56e-22;18!UBERON:0003914;3.21e-21;74!UBERON:0003915;7.63e-21;9!UBERON:0004700;7.63e-21;9!UBERON:0001917;7.63e-21;9!UBERON:0002049;1.18e-18;75!UBERON:0007798;1.18e-18;75!UBERON:0000487;3.61e-18;22!UBERON:0003498;8.42e-18;3!UBERON:0005985;8.42e-18;3!UBERON:0001621;8.42e-18;3!UBERON:0001135;1.85e-17;15!UBERON:0006914;8.24e-16;25!UBERON:0000025;9.34e-14;93!UBERON:0002456;5.84e-12;2!UBERON:0005396;6.89e-12;2!UBERON:0000490;6.99e-12;33!UBERON:0003834;1.70e-10;5!UBERON:0001533;1.70e-10;5!UBERON:0001009;3.33e-09;112!UBERON:0004535;4.45e-08;109!UBERON:0002385;1.23e-07;31!UBERON:0001015;1.23e-07;31!UBERON:0000383;1.23e-07;31!UBERON:0003513;1.27e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001637,1.15e-70,42;UBERON:0003509,1.15e-70,42;UBERON:0004572,1.15e-70,42;UBERON:0007500,1.60e-62,59;UBERON:0001981,1.60e-62,59;UBERON:0004537,1.60e-62,59;UBERON:0006965,1.60e-62,59;UBERON:0004573,3.21e-56,33;UBERON:0004571,3.21e-56,33;UBERON:0000055,1.66e-53,68;UBERON:0004872,3.10e-46,83;UBERON:0002049,6.32e-46,78;UBERON:0007798,6.32e-46,78;UBERON:0003914,3.53e-36,117;UBERON:0004535,7.91e-34,109;UBERON:0001009,9.11e-33,112;UBERON:0004237,1.30e-26,10;UBERON:0004695,1.30e-26,10;UBERON:0002111,1.30e-26,10;UBERON:0004178,1.30e-26,10;UBERON:0001134,2.58e-25,62;UBERON:0002036,2.58e-25,62;UBERON:0003082,2.58e-25,62;UBERON:0002385,2.13e-24,64;UBERON:0001015,2.13e-24,64;UBERON:0000383,2.13e-24,64;UBERON:0000947,3.02e-24,21;UBERON:0010191,3.02e-24,21;UBERON:0000490,2.34e-23,148;UBERON:0004638,1.56e-22,18;UBERON:0001986,1.56e-22,18;UBERON:0004852,1.56e-22,18;UBERON:0007503,1.21e-21,78;UBERON:0002329,1.34e-21,71;UBERON:0003059,1.34e-21,71;UBERON:0007282,1.34e-21,71;UBERON:0004290,1.34e-21,71;UBERON:0009618,1.34e-21,71;UBERON:0000025,3.00e-21,192;UBERON:0003077,3.05e-21,72;UBERON:0007285,3.05e-21,72;UBERON:0007524,6.76e-21,73;UBERON:0003915,8.80e-21,9;UBERON:0004700,8.80e-21,9;UBERON:0001917,8.80e-21,9;UBERON:0000487,3.62e-18,22;UBERON:0000486,6.74e-18,83;UBERON:0001621,9.17e-18,3;UBERON:0001135,1.90e-17,15;UBERON:0003081,9.79e-17,203;UBERON:0006914,8.25e-16,25;UBERON:0004111,8.99e-16,240;UBERON:0005256,8.24e-14,122;UBERON:0005396,4.95e-12,2;UBERON:0002456,5.23e-12,2;UBERON:0000483,4.99e-11,306;UBERON:0000119,7.34e-11,309;UBERON:0003498,7.38e-11,5;UBERON:0005985,7.38e-11,5;UBERON:0003834,1.57e-10,5;UBERON:0001533,1.57e-10,5;UBERON:0000926,1.67e-10,315;UBERON:0004120,1.67e-10,315;UBERON:0006603,1.67e-10,315;UBERON:0003104,1.66e-09,160;UBERON:0009142,1.66e-09,160;UBERON:0002204,7.06e-09,167;UBERON:0002100,9.74e-09,199;UBERON:0003513,1.20e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0.123766352960047,0.331397375727916,4.03395087871065,3.01347264011988,3.65155045193687,4.39139518911456,0,0,0,0,0,0,0.0764134057479513,0.0821005894499457,0.157421562627358,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.39133685156694,0,1.04142150482278,0,1.67799774483962,4.12677062910101,2.08994966536811,0,0.35576626268671,0,0,1.52054421143703,0,0,2.43042584364528,0.357198913136319,0,0.112611480483322,3.06633274931766,2.84779697870439,0.732806975721629,0,0,0,0,0,0,0,0,0,0,0.24666754841716,0,0.404132016209064,0.163461903113459,0.151357427644931,0,0,0.312160076830321,0,0.149448680551801,0,0,0,0,0.122834317311768,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0.234817388471643,0.144366447761074,0,0,0,0,0,0,0,2.81201501960331,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300343057843917,0,0.224262168690721,0,0.22001485746285,0.129271715757778,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0,0,0,0.871533458600294,0,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0,0,1.30139853857622,0,0,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0.195801157462741,0,0,0,0,0,0,0,0.248107807818777,0,0,0,0,0,0,0,0,0.574890092096664,2.59627214591811,0.116210378459959,0,0,0,0,0.182091168006717,0,0,0,0,0,0,0,1.53084334748864,0,0,0,0,0,0,0,0,0,0,0,0,0.412164046590889,0,0,0,0,0,0,0.308097234229289,0,0.137836572484531,0,0,0,0,0,0,0,0,0.464845549297286,0,1.3940745403212,4.92853728281742,10.6461206063404,0,5.37440235401368,0.286249773483982,0,0,0,0,0,1.59101623962968,4.70969184119538,0,0,0,12.5353138575456,3.17020642346017,4.21258456238981,0,3.65570234446927,2.11300293513511,0,0,0,0.551365343546124,0.66343897524122,3.5076070820301,0,0,7.50768394762005,0.6196469961995,0.845086807596724,0,0,4.63672366925625,0.354761064070598,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.445234820091624,0,0,0,0,0,0,0.123084805461069,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.158936578980379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.661983911750998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.548167698587004,0.993573058514948,0,0,0,0,0,0,0,0,0,0,0,0,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315132729228895,0,0.0674035438541849,0,0,0,0,0,0,0,0.2249738915515,0,0.0607495566580247,0,0,0,0,15.4187111826247,0,0,0,0,0,0,0,0,0,0,0.339936274560377,0.58620893471233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0.235265819698172,0,0,0.298509605773748,0,0.554805861502613,0,0,0,0,0.151230923763239,0,1.47855149989634,2.07085797312813,0,0.465788870628778,2.07353103920428,0,0,0,0.761610424337591,0.813741466409323,0.363697318405119,0.107410557042488,0,0.398095888698616,0.800055529326307,0,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.3062454773532,0.0642292250964595,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,1.3807198521202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0.778619813244484,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.709992004383392,0.596493833314104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26721740526556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr22:21138313..21138336,+ | |||
}} |
Revision as of 14:42, 21 January 2014
Short description: | p@chr22:21138313..21138336, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr22:21138313..21138336, + |
Coexpression cluster: | C2639_Smooth_large_Endothelial_Aortic_osteosarcoma_Preadipocyte_Renal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 8.30e-53 | 32 |
smooth muscle cell | 2.83e-38 | 43 |
smooth muscle myoblast | 2.83e-38 | 43 |
mesodermal cell | 6.58e-30 | 121 |
muscle cell | 4.77e-29 | 55 |
muscle precursor cell | 2.45e-27 | 58 |
myoblast | 2.45e-27 | 58 |
multi-potent skeletal muscle stem cell | 2.45e-27 | 58 |
aortic smooth muscle cell | 1.30e-26 | 10 |
electrically responsive cell | 8.52e-26 | 61 |
electrically active cell | 8.52e-26 | 61 |
blood vessel endothelial cell | 1.56e-22 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.56e-22 | 18 |
endothelial cell of artery | 8.80e-21 | 9 |
smooth muscle cell of the coronary artery | 9.17e-18 | 3 |
endothelial cell of vascular tree | 1.57e-16 | 24 |
embryonic cell | 5.36e-16 | 250 |
endothelial cell | 5.29e-13 | 36 |
smooth muscle cell of the carotid artery | 4.95e-12 | 2 |
smooth muscle cell of the internal thoracic artery | 5.23e-12 | 2 |
smooth muscle cell of the subclavian artery | 1.57e-10 | 5 |
meso-epithelial cell | 4.74e-10 | 45 |
aortic endothelial cell | 2.22e-08 | 6 |
lining cell | 2.06e-07 | 58 |
barrier cell | 2.06e-07 | 58 |