FFCP PHASE1:Hg19::chr10:33246815..33246830,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0000220!6.14e-26!246;CL:0002321!8.96e-26!248;CL:0000222!4.21e-22!119;CL:0000548!1.65e-18!679;CL:0000004!1.65e-18!679;CL:0000255!1.65e-18!679;CL:0000055!2.64e-18!180;CL:0000012!1.77e-17!682;CL:0000066!4.60e-16!254;CL:0000359!5.59e-16!32;CL:0000680!5.41e-15!57;CL:0000056!5.41e-15!57;CL:0000355!5.41e-15!57;CL:0000187!2.92e-14!54;CL:0000192!3.58e-14!42;CL:0000514!3.58e-14!42;CL:0000183!6.33e-14!59;CL:0000393!1.97e-13!60;CL:0000211!1.97e-13!60;CL:0000144!1.72e-12!625;CL:0002371!1.88e-12!591;CL:0000003!2.32e-09!722;CL:0002139!2.59e-09!24;CL:0000057!4.07e-09!75;CL:0000213!1.28e-07!57;CL:0000215!1.28e-07!57;CL:0000071!2.26e-07!18;CL:0002546!2.26e-07!18;CL:0000115!4.86e-07!35 | |ontology_enrichment_celltype=CL:0000220!6.14e-26!246;CL:0002321!8.96e-26!248;CL:0000222!4.21e-22!119;CL:0000548!1.65e-18!679;CL:0000004!1.65e-18!679;CL:0000255!1.65e-18!679;CL:0000055!2.64e-18!180;CL:0000012!1.77e-17!682;CL:0000066!4.60e-16!254;CL:0000359!5.59e-16!32;CL:0000680!5.41e-15!57;CL:0000056!5.41e-15!57;CL:0000355!5.41e-15!57;CL:0000187!2.92e-14!54;CL:0000192!3.58e-14!42;CL:0000514!3.58e-14!42;CL:0000183!6.33e-14!59;CL:0000393!1.97e-13!60;CL:0000211!1.97e-13!60;CL:0000144!1.72e-12!625;CL:0002371!1.88e-12!591;CL:0000003!2.32e-09!722;CL:0002139!2.59e-09!24;CL:0000057!4.07e-09!75;CL:0000213!1.28e-07!57;CL:0000215!1.28e-07!57;CL:0000071!2.26e-07!18;CL:0002546!2.26e-07!18;CL:0000115!4.86e-07!35 | ||
|ontology_enrichment_celltype_v019=CL:0000359;1.50e-16;32!CL:0000192;1.14e-10;43!CL:0002139;2.98e-10;24!CL:0000071;3.75e-08;18!CL:0000187;1.27e-07;55!CL:0002539;4.94e-07;10 | |ontology_enrichment_celltype_v019=CL:0000359;1.50e-16;32!CL:0000192;1.14e-10;43!CL:0002139;2.98e-10;24!CL:0000071;3.75e-08;18!CL:0000187;1.27e-07;55!CL:0002539;4.94e-07;10 | ||
|ontology_enrichment_celltype_v019_2=CL:0002321,2.25e-22,250;CL:0000222,5.02e-22,121;CL:0000359,1.39e-17,32;CL:0000680,5.27e-15,58;CL:0000056,5.27e-15,58;CL:0000355,5.27e-15,58;CL:0000192,1.14e-14,43;CL:0000514,1.14e-14,43;CL:0000187,3.39e-14,55;CL:0000066,3.25e-13,253;CL:0000393,1.73e-12,61;CL:0000211,1.73e-12,61;CL:0000057,5.51e-11,76;CL:0002139,3.55e-10,24;CL:0000071,5.06e-08,18;CL:0002546,5.06e-08,18;CL:0000115,1.05e-07,36;CL:0000213,1.80e-07,58;CL:0000215,1.80e-07,58;CL:0002539,4.88e-07,10 | |||
|ontology_enrichment_development_v019=CL:0000514;1.14e-10;43!CL:0002546;3.75e-08;18!CL:0000355;8.64e-08;58 | |ontology_enrichment_development_v019=CL:0000514;1.14e-10;43!CL:0002546;3.75e-08;18!CL:0000355;8.64e-08;58 | ||
|ontology_enrichment_disease=DOID:2394!2.84e-08!14 | |ontology_enrichment_disease=DOID:2394!2.84e-08!14 | ||
|ontology_enrichment_disease_v019=DOID:2394;5.90e-09;14 | |ontology_enrichment_disease_v019=DOID:2394;5.90e-09;14 | ||
|ontology_enrichment_disease_v019_2=DOID:2394,5.07e-09,14 | |||
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|ontology_enrichment_uberon_v019=UBERON:0004573;2.10e-16;33!UBERON:0004571;2.10e-16;33!UBERON:0001637;2.35e-15;42!UBERON:0003509;2.35e-15;42!UBERON:0004572;2.35e-15;42!UBERON:0007500;5.07e-13;56!UBERON:0001981;5.07e-13;56!UBERON:0004537;5.07e-13;56!UBERON:0000055;5.54e-12;65!UBERON:0002049;8.96e-11;75!UBERON:0007798;8.96e-11;75!UBERON:0000947;9.81e-11;21!UBERON:0010191;9.81e-11;21!UBERON:0003914;2.27e-10;74!UBERON:0000487;3.02e-08;22!UBERON:0004638;3.75e-08;18!UBERON:0001986;3.75e-08;18!UBERON:0004852;3.75e-08;18!UBERON:0000490;3.63e-07;33!UBERON:0004237;4.94e-07;10!UBERON:0004695;4.94e-07;10!UBERON:0002111;4.94e-07;10!UBERON:0004178;4.94e-07;10 | |ontology_enrichment_uberon_v019=UBERON:0004573;2.10e-16;33!UBERON:0004571;2.10e-16;33!UBERON:0001637;2.35e-15;42!UBERON:0003509;2.35e-15;42!UBERON:0004572;2.35e-15;42!UBERON:0007500;5.07e-13;56!UBERON:0001981;5.07e-13;56!UBERON:0004537;5.07e-13;56!UBERON:0000055;5.54e-12;65!UBERON:0002049;8.96e-11;75!UBERON:0007798;8.96e-11;75!UBERON:0000947;9.81e-11;21!UBERON:0010191;9.81e-11;21!UBERON:0003914;2.27e-10;74!UBERON:0000487;3.02e-08;22!UBERON:0004638;3.75e-08;18!UBERON:0001986;3.75e-08;18!UBERON:0004852;3.75e-08;18!UBERON:0000490;3.63e-07;33!UBERON:0004237;4.94e-07;10!UBERON:0004695;4.94e-07;10!UBERON:0002111;4.94e-07;10!UBERON:0004178;4.94e-07;10 | ||
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| ||
|short_description=p4@ITGB1 | |short_description=p4@ITGB1 | ||
}} | }} |
Revision as of 19:24, 17 November 2012
Short description: | p4@ITGB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_ITGB1_5end |
Coexpression cluster: | C2058_Smooth_basal_mesenchymal_tubular_Renal_lung_Urothelial |
Association with transcript: | 0bp_to_ENST00000396033, NM_133376, uc001iws.3_5end |
EntrezGene: | ITGB1 |
HGNC: | 6153 |
UniProt: | P05556 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 2.25e-22 | 250 |
mesodermal cell | 5.02e-22 | 121 |
vascular associated smooth muscle cell | 1.39e-17 | 32 |
muscle precursor cell | 5.27e-15 | 58 |
myoblast | 5.27e-15 | 58 |
multi-potent skeletal muscle stem cell | 5.27e-15 | 58 |
smooth muscle cell | 1.14e-14 | 43 |
smooth muscle myoblast | 1.14e-14 | 43 |
muscle cell | 3.39e-14 | 55 |
epithelial cell | 3.25e-13 | 253 |
electrically responsive cell | 1.73e-12 | 61 |
electrically active cell | 1.73e-12 | 61 |
fibroblast | 5.51e-11 | 76 |
endothelial cell of vascular tree | 3.55e-10 | 24 |
blood vessel endothelial cell | 5.06e-08 | 18 |
embryonic blood vessel endothelial progenitor cell | 5.06e-08 | 18 |
endothelial cell | 1.05e-07 | 36 |
lining cell | 1.80e-07 | 58 |
barrier cell | 1.80e-07 | 58 |
aortic smooth muscle cell | 4.88e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 5.07e-09 | 14 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.