FFCP PHASE1:Hg19::chr10:94000390..94000401,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=22849 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=21746 | |||
|TSSclassifier=not | |||
|UniProt=Q8NE35 | |||
|association_with_transcript=-272bp_to_uc001khu.1_5end | |||
|description=CAGE_peak_12_at_CPEB3_5end | |||
|id=chr10:94000390..94000401,- | |||
|ontology_enrichment_celltype=CL:0000860!3.12e-09!45;CL:0000766!3.56e-09!76;CL:0002057!5.71e-09!42;CL:0002194!1.56e-08!63;CL:0000576!1.56e-08!63;CL:0000040!1.56e-08!63;CL:0000559!1.56e-08!63;CL:0002009!5.36e-08!65;CL:0000839!1.34e-07!70;CL:0000557!2.29e-07!71 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;6.81e-08;82!UBERON:0006298;2.28e-07;1!UBERON:0005754;2.28e-07;1!UBERON:0008801;6.92e-07;1!UBERON:0010227;6.92e-07;1!UBERON:0005425;6.92e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.03e-46!115;UBERON:0001049!1.16e-30!57;UBERON:0005068!1.16e-30!57;UBERON:0006241!1.16e-30!57;UBERON:0007135!1.16e-30!57;UBERON:0002616!2.74e-24!59;UBERON:0003080!1.48e-22!42;UBERON:0002780!1.12e-21!41;UBERON:0001890!1.12e-21!41;UBERON:0006240!1.12e-21!41;UBERON:0001017!4.05e-20!82;UBERON:0000073!1.02e-19!94;UBERON:0001016!1.02e-19!94;UBERON:0002020!1.26e-19!34;UBERON:0003528!1.26e-19!34;UBERON:0003075!1.33e-19!86;UBERON:0007284!1.33e-19!86;UBERON:0005743!2.11e-19!86;UBERON:0001893!2.48e-19!34;UBERON:0000955!2.78e-19!69;UBERON:0006238!2.78e-19!69;UBERON:0002346!9.19e-19!90;UBERON:0002791!2.02e-18!33;UBERON:0001869!7.70e-18!32;UBERON:0002619!1.05e-15!22;UBERON:0001950!1.10e-13!20;UBERON:0000956!4.56e-13!25;UBERON:0000203!4.56e-13!25;UBERON:0003056!7.46e-13!61;UBERON:0000153!1.50e-11!129;UBERON:0007811!1.50e-11!129;UBERON:0000033!3.22e-11!123;UBERON:0003076!3.42e-09!15;UBERON:0003057!3.42e-09!15;UBERON:0002298!8.12e-09!8;UBERON:0002390!1.62e-08!102;UBERON:0003061!1.62e-08!102;UBERON:0004121!1.77e-08!169;UBERON:0002420!1.88e-08!9;UBERON:0007245!1.88e-08!9;UBERON:0010009!1.88e-08!9;UBERON:0010011!1.88e-08!9;UBERON:0000454!1.88e-08!9;UBERON:0002308!2.71e-08!9;UBERON:0000125!2.71e-08!9;UBERON:0000924!2.72e-08!173;UBERON:0006601!2.72e-08!173;UBERON:0000062!6.34e-08!511;UBERON:0004732!1.20e-07!13;UBERON:0001871!1.28e-07!7;UBERON:0002050!3.02e-07!605;UBERON:0005423!3.02e-07!605;UBERON:0002193!3.61e-07!112;UBERON:0000349!4.08e-07!5;UBERON:0000922!4.88e-07!612;UBERON:0000923!5.96e-07!604;UBERON:0005291!5.96e-07!604;UBERON:0006598!5.96e-07!604;UBERON:0002532!5.96e-07!604 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;6.41e-25;34!UBERON:0002020;6.41e-25;34!UBERON:0002619;1.85e-22;22!UBERON:0002791;2.18e-22;32!UBERON:0001869;1.24e-21;32!UBERON:0001893;2.82e-20;34!UBERON:0001950;4.66e-20;20!UBERON:0000956;1.16e-19;25!UBERON:0000203;1.16e-19;25!UBERON:0000349;5.16e-18;5!UBERON:0002420;2.76e-15;9!UBERON:0007245;2.76e-15;9!UBERON:0010009;2.76e-15;9!UBERON:0010011;2.76e-15;9!UBERON:0000454;2.76e-15;9!UBERON:0002780;2.90e-15;41!UBERON:0001890;2.90e-15;41!UBERON:0001871;6.44e-13;6!UBERON:0001829;1.39e-12;2!UBERON:0001876;4.11e-12;2!UBERON:0000073;1.90e-11;53!UBERON:0002616;1.90e-11;53!UBERON:0007023;2.11e-11;114!UBERON:0000125;4.47e-10;9!UBERON:0002308;4.47e-10;9!UBERON:0001044;2.24e-09;6!UBERON:0003293;2.24e-09;6!UBERON:0003294;2.24e-09;6!UBERON:0010047;2.24e-09;6!UBERON:0003408;2.24e-09;6!UBERON:0000167;2.24e-09;6!UBERON:0006947;1.13e-08;3!UBERON:0004054;1.13e-08;3!UBERON:0001870;1.25e-08;3!UBERON:0001017;1.52e-08;75!UBERON:0001016;2.50e-08;83!UBERON:0009663;1.08e-07;7!UBERON:0000998;2.28e-07;1!UBERON:0001736;2.28e-07;1!UBERON:0006868;2.28e-07;1!UBERON:0000955;5.76e-07;68!UBERON:0001882;6.92e-07;1!UBERON:0002022;6.92e-07;1!UBERON:0002079;6.92e-07;1!UBERON:0003112;6.92e-07;1!UBERON:0001000;6.92e-07;1!UBERON:0001831;6.92e-07;1!UBERON:0000941;6.92e-07;1!UBERON:0001389;6.92e-07;1!UBERON:0000026;6.92e-07;1!UBERON:0008784;6.92e-07;1!UBERON:0001785;6.92e-07;1!UBERON:0002464;6.92e-07;1!UBERON:0004904;6.92e-07;1!UBERON:0006058;6.92e-07;1!UBERON:0003663;6.92e-07;1!UBERON:0004256;6.92e-07;1!UBERON:0011158;6.92e-07;1!UBERON:0001021;6.92e-07;1!UBERON:0004708;6.92e-07;1!UBERON:0002101;6.92e-07;1!UBERON:0004709;6.92e-07;1!UBERON:0002529;6.92e-07;1!UBERON:0010538;6.92e-07;1!UBERON:0003661;6.92e-07;1!UBERON:0010890;6.92e-07;1!UBERON:0002471;6.92e-07;1!UBERON:0001383;6.92e-07;1!UBERON:0010758;6.92e-07;1!UBERON:0010707;6.92e-07;1!UBERON:0000978;6.92e-07;1!UBERON:0002103;6.92e-07;1!UBERON:0005352;6.92e-07;1!UBERON:0001665;6.92e-07;1!UBERON:0003823;6.92e-07;1!UBERON:0003128;6.92e-07;1!UBERON:0001567;6.92e-07;1!UBERON:0005403;6.92e-07;1!UBERON:0000154;6.92e-07;1!UBERON:0010709;6.92e-07;1!UBERON:0001703;6.92e-07;1!UBERON:0002241;6.92e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.60e-30,114;UBERON:0003528,2.31e-28,34;UBERON:0002020,2.31e-28,34;UBERON:0002791,7.19e-26,32;UBERON:0001869,7.19e-26,32;UBERON:0001893,3.06e-24,34;UBERON:0002619,1.00e-22,22;UBERON:0001049,1.30e-21,56;UBERON:0005068,1.30e-21,56;UBERON:0006241,1.30e-21,56;UBERON:0007135,1.30e-21,56;UBERON:0001950,3.26e-20,20;UBERON:0000073,4.06e-20,53;UBERON:0002616,4.06e-20,53;UBERON:0000956,6.80e-20,25;UBERON:0000203,6.80e-20,25;UBERON:0002780,9.27e-20,41;UBERON:0001890,9.27e-20,41;UBERON:0003080,9.27e-20,41;UBERON:0006240,9.27e-20,41;UBERON:0000349,1.71e-18,5;UBERON:0003075,9.54e-16,82;UBERON:0007284,9.54e-16,82;UBERON:0001017,1.01e-15,81;UBERON:0001016,1.03e-15,89;UBERON:0002420,2.29e-15,9;UBERON:0007245,2.29e-15,9;UBERON:0010009,2.29e-15,9;UBERON:0010011,2.29e-15,9;UBERON:0000454,2.29e-15,9;UBERON:0002346,7.42e-15,86;UBERON:0000955,8.49e-15,68;UBERON:0006238,8.49e-15,68;UBERON:0003056,1.09e-14,61;UBERON:0001871,2.69e-13,6;UBERON:0001829,7.44e-13,2;UBERON:0001876,8.36e-13,2;UBERON:0010371,1.08e-11,104;UBERON:0010314,5.35e-11,132;UBERON:0000125,5.58e-10,9;UBERON:0002308,5.58e-10,9;UBERON:0004121,1.01e-09,171;UBERON:0000924,1.01e-09,171;UBERON:0006601,1.01e-09,171;UBERON:0001044,1.65e-09,6;UBERON:0003293,1.65e-09,6;UBERON:0003294,1.65e-09,6;UBERON:0010047,1.65e-09,6;UBERON:0000167,1.65e-09,6;UBERON:0006947,8.09e-09,3;UBERON:0004054,8.09e-09,3;UBERON:0001870,2.08e-08,3;UBERON:0011216,3.66e-08,223;UBERON:0004111,1.70e-07,240;UBERON:0009663,1.78e-07,7;UBERON:0000998,2.22e-07,1;UBERON:0006868,2.22e-07,1;UBERON:0001736,2.36e-07,1;UBERON:0006298,2.36e-07,1;UBERON:0001831,3.57e-07,1;UBERON:0001567,3.57e-07,1;UBERON:0008801,3.57e-07,1;UBERON:0002022,4.01e-07,1;UBERON:0001000,4.25e-07,1;UBERON:0005352,4.25e-07,1;UBERON:0002079,6.02e-07,1;UBERON:0000941,6.38e-07,1;UBERON:0001785,6.38e-07,1;UBERON:0002464,6.38e-07,1;UBERON:0004904,6.38e-07,1;UBERON:0001021,6.38e-07,1;UBERON:0003902,6.38e-07,1;UBERON:0005425,6.38e-07,1;UBERON:0005904,8.27e-07,4;UBERON:0005418,8.98e-07,1;UBERON:0001389,8.98e-07,1;UBERON:0000026,8.98e-07,1;UBERON:0008784,8.98e-07,1;UBERON:0006058,8.98e-07,1;UBERON:0003663,8.98e-07,1;UBERON:0004256,8.98e-07,1;UBERON:0004708,8.98e-07,1;UBERON:0002101,8.98e-07,1;UBERON:0004709,8.98e-07,1;UBERON:0002529,8.98e-07,1;UBERON:0010538,8.98e-07,1;UBERON:0003661,8.98e-07,1;UBERON:0010890,8.98e-07,1;UBERON:0002471,8.98e-07,1;UBERON:0001383,8.98e-07,1;UBERON:0004357,8.98e-07,1;UBERON:0004347,8.98e-07,1;UBERON:0005420,8.98e-07,1;UBERON:0005732,8.98e-07,1;UBERON:0010758,8.98e-07,1;UBERON:0010707,8.98e-07,1;UBERON:0000978,8.98e-07,1;UBERON:0002103,8.98e-07,1;UBERON:0001665,8.98e-07,1;UBERON:0003823,8.98e-07,1;UBERON:0000154,8.98e-07,1;UBERON:0010709,8.98e-07,1;UBERON:0005733,8.98e-07,1;UBERON:0005730,8.98e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,0.393364276848904,0.767658796194425,0,0,0,0,0.0774672005803016,0,0,0,0.200544447470142,0,0.223915474239924,0,0.257575567634187,0.581592955118259,0.377875943688809,0,0,0.822335776043652,0,0.28769239232215,0.512321413058201,0,1.37898272294647,0,0,0.188242339542605,0,0.224723484445085,0.306083892370903,0.320929027076094,0,0.329851300186716,0.199463657621632,0,0.580418477257168,0,0,0,0,0.434377689410233,0.605399502633369,1.47311054395026,0,0.422510572623884,0,0.419317291016752,0.673971786878971,0.901061357049038,0.803627933485401,0.285012743741249,0.59675003159727,1.0959849225878,0,0,0,0,0,0.574752439954483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0.328875809207352,0,0.289803085735052,0,0,0,0.113309342697566,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0.130979075497713,0,0,0.324547393654683,0.174129737299267,0.26591592103773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30648779579902,0,0.113432183160021,0,0.213557388818567,0,0,0,0,0.18611685633159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168584690078102,0,0,0,0,0,0.588664395376038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,2.95597942737566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.542621605391443,0,0,0,0,0,0,0,0,1.00451418286425,0,0,0,0,0.289562613335158,0.205476322550383,0,0,0,0,0,0,0,0,0.167516265334349,0,0.749007023947182,0,2.90090859405225,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0.106727557803444,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0.0821271560138091,0,0.232420756919918,0,0,0.184161977871793,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2023155617111,0,0,0,0,0.532306030317022,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0,1.13929437434833,0.238231775457789,0,0.648473311192717,0.540031437238115,0.79312517629427,0,0,0,0,0,0,0,0,0,0.423347165447766,0,0,0,0,0,0,0,0,0,0.343505344755765,0,0,0,0.19538809540204,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9882952955326,1.68803299692615,0,0,0,0,0,0,0,0,0,0,0.537063524026827,0,0.0986434056369336,0,0,0,0.649376687132959,0,0,0,0.724999575434793,0,0,0,0,0,0.173624994933292,0,1.32656082487949,1.52581736317083,0.331737779793674,0.591095237907095,1.31631238292384,0.21787692703798,0,0.0769502585037971,0,0,0,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.471807930864739,0,0.468528891450678,0,0,0,1.57833761139756,0,0.61214552326098,0.568679216656392,0,0,0,0,0,0,0,0,0.173559738335131,0,0,0.698906672968121,0,0.0967563312890851,0.0730893170861856,0,0.193978032976839,0,0,0,0,1.07628353124994,0,0,0,0,0.144090417154106,0,0,0.288109595976299,0,0.471388069233591,0,0,0,0,1.20084057741958,0.958337652243951,0,0,0,0,0.229160424011684,0,0,0,0.223171457441873,0,0,0,0,0,0,0,0,1.59045937961861,0.953423842781029,0,0,0,0,0,1.57948847310864,0,0.236417121897595,0.104909176269996,0,0,0.191915197319445,1.42939065274673,0,0,0,0,0,0,0,0,0,0.293104467356165,1.32506888912221,1.68067843270016,0.92562821219883,0,0,0,0.314408610199332,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0.610131324509816,2.003054891304,0.573409195690071,0.443716206147409,0.620964029413834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.380805212168795,0,0,0.107410557042488,0,0,0,0.343395705182793,0,0,0,0,0,0,0,0.244736704506468,0,0,0,0,0,0,0,0,0,1.52084279766904,0,0,0,0,0,0.211312123358627,0,0,0.688859918643263,0,0,0.139879507719444,0.622077260032973,0.383683113910955,0.431299245586727,0,0.109209638192014,0,0,0.123935764259002,0,0,0,0.80057074828547,0,0,1.02766760154335,0,1.43670473151436,0.82046545696302,0.252071696221718,0.899044282034833,1.13032951942296,1.42769420259154,0.0981477185010256,0.235939446695481,0,0,0,0,0,0.225630985047772,0,1.56302802246618,0,0,0,0.87798860003913,0,0.620060389503552,1.07806877329642,0.546974809018219,1.64477330057155,0,0,0,0.535701835878287,0.336283722218824,0,0.682986574053893,0,0.115233987555779,0,0.951576261675644,0.986591603442736,0,0,0.156986185701028,0.942693539496011,0,0.913158720509496,0,0,0.357382720883282,0,0,0,0.801711364730253,0,0,0,4.30227358820278,0,0,3.81048345171836,0,0,0,0,0.098150233615243,0,1.29485767437579,0.205325613712494,0,0,0.467878926924211,0,0.118920090777569,0,0,0.301925687133347,0.0771741581079447,0.218559560503957,1.41095188908457,0,0.471353094203252,0.392616934229891,1.18818560130834,0.8453114551668,0,0.187967835959707,0.193373663920732,0,0,0.352894871715692,0.0802413666891683,0,3.66983426723633,0.430018749454354,0.157771562193185,1.22384682343646,0.436350690340377,0.5290268405154,0,0,0,0,0,0,0.203977659483963,0,0.275684698604535,0.250707539292375,0.151557396436479,0,0,0.930896962757057,0,0.23806443146374,0.0645889098360061,0.186224142887574,0.112131862580613,0.12729431655633,0.202117188958219,0.435433495793923,0,0.202056159043763,0.358611026963382,0,0,0,0,0.0898252021065869,0,0.122241444182866,0.406896178315738,0.665756774185513,0.201273793591026,0 | |||
|short_description=p12@CPEB3 | |||
}} |
Revision as of 04:10, 11 January 2014
Short description: | p12@CPEB3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_CPEB3_5end |
Coexpression cluster: | NA |
Association with transcript: | -272bp_to_uc001khu.1_5end |
EntrezGene: | CPEB3 |
HGNC: | 21746 |
UniProt: | Q8NE35 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data