FFCP PHASE1:Hg19::chr22:38374029..38374049,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C327 | |||
|description=CAGE_peak_at_chr22:38374029..38374049,+ | |||
|id=chr22:38374029..38374049,+ | |||
|ontology_enrichment_celltype=CL:0000148!5.15e-20!10;CL:0000541!5.15e-20!10;CL:0000147!1.17e-16!14;CL:0002567!3.17e-09!3;CL:0000710!5.23e-09!20 | |||
|ontology_enrichment_celltype_v019=CL:0000148;2.33e-19;10!CL:0002567;2.33e-17;3!CL:0000147;1.19e-13;14!CL:0000710;2.32e-09;20!CL:0000075;9.18e-07;27!CL:0002566;9.65e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,2.20e-19,10;CL:0000541,2.20e-19,10;CL:0002567,2.35e-17,3;CL:0000147,1.14e-13,14;CL:0000710,2.26e-09,20;CL:0002566,8.21e-07,1;CL:0000075,9.00e-07,27 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.05e-13;82!UBERON:0003056;1.11e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1909;1.21e-11;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,6.76e-12,2 | |||
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|ontology_enrichment_uberon_v019=UBERON:0003528;1.09e-31;34!UBERON:0002020;1.09e-31;34!UBERON:0002298;3.89e-30;6!UBERON:0001893;1.53e-28;34!UBERON:0000073;1.24e-27;53!UBERON:0002616;1.24e-27;53!UBERON:0002791;8.17e-27;32!UBERON:0002780;9.48e-26;41!UBERON:0001890;9.48e-26;41!UBERON:0002619;1.07e-24;22!UBERON:0001869;1.98e-23;32!UBERON:0000956;1.33e-21;25!UBERON:0000203;1.33e-21;25!UBERON:0000125;1.69e-20;9!UBERON:0002308;1.69e-20;9!UBERON:0004732;2.32e-18;13!UBERON:0001950;4.38e-18;20!UBERON:0000349;1.10e-16;5!UBERON:0000988;3.87e-16;3!UBERON:0001896;8.83e-16;3!UBERON:0005290;8.83e-16;3!UBERON:0004733;8.15e-15;12!UBERON:0002028;8.15e-15;12!UBERON:0000955;8.47e-15;68!UBERON:0002420;2.38e-14;9!UBERON:0007245;2.38e-14;9!UBERON:0010009;2.38e-14;9!UBERON:0010011;2.38e-14;9!UBERON:0000454;2.38e-14;9!UBERON:0001017;1.66e-13;75!UBERON:0001016;2.37e-12;83!UBERON:0009663;3.03e-12;7!UBERON:0005162;1.46e-11;2!UBERON:0000122;1.46e-11;2!UBERON:0001954;1.85e-11;2!UBERON:0002148;1.85e-11;2!UBERON:0006331;1.85e-11;2!UBERON:0009662;1.85e-11;2!UBERON:0003022;1.85e-11;2!UBERON:0002421;1.85e-11;2!UBERON:0002600;1.85e-11;2!UBERON:0007023;5.38e-10;114!UBERON:0000200;3.88e-08;6!UBERON:0001870;1.11e-07;3!UBERON:0001871;3.48e-07;6!UBERON:0002038;6.76e-07;1!UBERON:0009661;6.76e-07;1!UBERON:0002950;6.76e-07;1!UBERON:0001891;6.76e-07;1!UBERON:0002336;7.54e-07;1!UBERON:0011215;7.54e-07;1!UBERON:0001018;7.54e-07;1!UBERON:0002473;7.54e-07;1!UBERON:0005340;7.54e-07;1!UBERON:0003544;7.54e-07;1!UBERON:0005970;7.54e-07;1!UBERON:0002316;7.54e-07;1!UBERON:0001020;7.54e-07;1!UBERON:0002437;7.54e-07;1 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.348581828608555,0.621966330092223,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0,0,0,2.98440103173194,8.02175693672383,4.68869788840188,3.4214489204541,2.46785982487976,0.901029173531752,6.28818151787272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68803299692615,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,1.11321717794222,1.99613798001194,0,0,0,0,0,0,0,0,0,0,1.08536794762867,0,0.221158519862449,0.295547618953547,0,0,0,0.384751292518985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.30265551605317,0.802577647298789,0.702793337176017,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387956065953678,0,0.451961481561065,0,0,1.01297273529406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,2.19048606227189,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,1.59045937961861,2.58786471611994,0,0,0.415440338029185,0,0,0.668245123238271,0,0,0.104909176269996,0,0,0,0.714695326373367,0.662091970365432,0,0,0,0,0,0,0,0,0,0,1.42211251997706,2.90911723833918,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.488105059607853,1.502291168478,1.72022758707021,1.77486482458964,1.61450647647597,0,0,1.97143852804142,5.70930667089935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15612605173627,0,1.43670473151436,0,0,1.1756732918917,0.968853873791107,1.42769420259154,0,0,0,0,0,0,0,0,0,0.781514011233092,0,0,0,0.742913430802341,0,0.826747186004736,1.26831620387814,0,1.64477330057155,0.992422356778588,0,0,0,0.336283722218824,0,0,0,0,0,1.69924332442079,1.51277379194553,0,0,0.156986185701028,0.785577949580009,0,0,0,0,1.50100742770978,0,0,0,0,0,0,0,1.29068207646083,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.437119121007915,0,0.245148321753905,0,1.76677620403451,0.594092800654172,0.8453114551668,0,0,0,0,0,0,0,0.730336388246517,0,4.73020624399789,0,2.10773619591836,0,0,0,0,0,0,0,0,0.101988829741982,0,0,0,0.151557396436479,0,0.829169439458779,2.79269088827117,0,0.476128862927481,0,0,0,0,0,0.217716747896961,0,0,0.0717222053926763,0.99798106963804,0,0,0,0,0,0.122241444182866,1.22068853494722,0,0,0 | |||
|short_description=p@chr22:38374029..38374049,+ | |||
}} |
Revision as of 15:55, 21 January 2014
Short description: | p@chr22:38374029..38374049, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr22:38374029..38374049, + |
Coexpression cluster: | C327_Melanocyte_corpus_thalamus_substantia_melanoma_globus_optic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 2.20e-19 | 10 |
melanoblast | 2.20e-19 | 10 |
light melanocyte | 2.35e-17 | 3 |
pigment cell | 1.14e-13 | 14 |
neurecto-epithelial cell | 2.26e-09 | 20 |
dark melanocyte | 8.21e-07 | 1 |
columnar/cuboidal epithelial cell | 9.00e-07 | 27 |
Ontology term | p-value | n |
---|---|---|
melanoma | 6.76e-12 | 2 |