FFCP PHASE1:Mm9::chr17:44090307..44090318,+: Difference between revisions
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{{FFCP|EntrezGene=53901|HGNC=|MCL_coexpression_id=20|UniProt=Q9JHG2,Q543P2|association_with_transcript=167bp_to_ENSMUST00000044792,NM_030598,uc008cpq.1_5end|description=CAGE_peak_5_at_Rcan2_5end|id=chr17:44090307..44090318,+|ontology_enrichment_celltype=CL:0000117!1.62e-11!23;CL:0000337!1.62e-11!23;CL:0002319!9.20e-10!43;CL:0000221!2.40e-09!44;CL:0000133!2.40e-09!44;CL:0000055!1.51e-08!50;CL:0000540!5.70e-08!33;CL:0000047!5.70e-08!33;CL:0000031!5.70e-08!33;CL:0000404!5.70e-08!33;CL:0000393!4.33e-07!39;CL:0000211!4.33e-07!39|ontology_enrichment_celltype_v019_2=CL:0000117,9.29e-15,23;CL:0000337,9.29e-15,23;CL:0000540,2.53e-09,33;CL:0000047,2.53e-09,33;CL:0000031,2.53e-09,33;CL:0000404,2.53e-09,33;CL:0002610,6.83e-08,3;CL:0002319,1.56e-07,43;CL:0000393,2.02e-07,39;CL:0000211,2.02e-07,39;CL:0002614,2.08e-07,3;CL:0000221,2.74e-07,44;CL:0000133,2.74e-07,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!2.73e-27!63;UBERON:0001049!5.22e-27!52;UBERON:0005068!5.22e-27!52;UBERON:0006241!5.22e-27!52;UBERON:0007135!5.22e-27!52;UBERON:0000073!6.00e-27!75;UBERON:0001016!6.00e-27!75;UBERON:0001017!7.07e-26!73;UBERON:0005743!7.07e-26!73;UBERON:0000955!9.72e-26!50;UBERON:0006238!9.72e-26!50;UBERON:0002616!6.94e-25!49;UBERON:0002346!2.90e-23!71;UBERON:0003075!2.90e-23!71;UBERON:0007284!2.90e-23!71;UBERON:0004121!2.50e-22!102;UBERON:0000924!2.50e-22!102;UBERON:0006601!2.50e-22!102;UBERON:0002020!8.83e-22!34;UBERON:0003056!2.85e-18!49;UBERON:0002791!8.58e-18!29;UBERON:0003528!8.58e-18!29;UBERON:0001893!8.58e-18!29;UBERON:0003080!1.39e-16!40;UBERON:0002780!1.27e-15!39;UBERON:0001890!1.27e-15!39;UBERON:0006240!1.27e-15!39;UBERON:0007811!2.24e-15!86;UBERON:0000153!1.95e-13!94;UBERON:0003076!1.20e-11!12;UBERON:0003057!1.20e-11!12;UBERON:0000956!1.97e-11!21;UBERON:0001869!1.97e-11!21;UBERON:0000203!1.97e-11!21;UBERON:0002619!9.45e-11!17;UBERON:0002021!2.10e-10!10;UBERON:0000411!2.10e-10!10;UBERON:0001950!2.10e-10!10;UBERON:0002420!8.44e-08!8;UBERON:0007245!8.44e-08!8;UBERON:0010009!8.44e-08!8;UBERON:0010011!8.44e-08!8;UBERON:0000454!8.44e-08!8;UBERON:0002298!1.28e-07!6;UBERON:0000025!3.15e-07!114;UBERON:0004111!7.05e-07!122;UBERON:0004733!7.74e-07!6;UBERON:0004732!7.74e-07!6;UBERON:0002028!7.74e-07!6;UBERON:0007277!7.74e-07!6|ontology_enrichment_uberon_v019_2=UBERON:0000073,9.87e-43,54;UBERON:0001049,7.51e-39,52;UBERON:0005068,7.51e-39,52;UBERON:0006241,7.51e-39,52;UBERON:0007135,7.51e-39,52;UBERON:0001017,5.66e-36,73;UBERON:0001016,8.57e-35,75;UBERON:0002346,3.46e-34,64;UBERON:0003075,3.46e-34,64;UBERON:0007284,3.46e-34,64;UBERON:0000955,6.00e-33,47;UBERON:0006238,6.00e-33,47;UBERON:0002616,2.20e-31,46;UBERON:0002020,4.71e-30,34;UBERON:0010371,5.47e-29,73;UBERON:0004121,6.10e-29,95;UBERON:0000924,6.10e-29,95;UBERON:0006601,6.10e-29,95;UBERON:0003528,7.95e-25,29;UBERON:0002791,7.95e-25,29;UBERON:0001893,7.95e-25,29;UBERON:0003080,2.08e-23,40;UBERON:0002780,1.21e-21,39;UBERON:0001890,1.21e-21,39;UBERON:0006240,1.21e-21,39;UBERON:0003056,1.46e-21,49;UBERON:0010314,2.39e-21,92;UBERON:0002021,6.64e-20,10;UBERON:0000411,6.64e-20,10;UBERON:0001950,6.64e-20,10;UBERON:0003076,1.66e-16,12;UBERON:0003057,1.66e-16,12;UBERON:0002619,1.21e-15,17;UBERON:0000956,1.39e-14,21;UBERON:0001869,1.39e-14,21;UBERON:0000203,1.39e-14,21;UBERON:0000025,1.65e-13,114;UBERON:0004111,4.06e-12,122;UBERON:0002420,5.24e-12,8;UBERON:0007245,5.24e-12,8;UBERON:0010009,5.24e-12,8;UBERON:0010011,5.24e-12,8;UBERON:0000454,5.24e-12,8;UBERON:0004733,1.14e-09,6;UBERON:0004732,1.14e-09,6;UBERON:0002028,1.14e-09,6;UBERON:0007277,1.14e-09,6;UBERON:0002950,1.28e-09,4;UBERON:0001891,1.28e-09,4;UBERON:0009616,1.28e-09,4;UBERON:0010286,1.28e-09,4;UBERON:0002240,2.23e-08,6;UBERON:0005174,2.23e-08,6;UBERON:0001137,2.23e-08,6;UBERON:0011216,2.90e-08,194;UBERON:0004684,6.83e-08,3;UBERON:0002275,6.83e-08,3;UBERON:0000483,1.63e-07,174;UBERON:0002038,2.08e-07,3;UBERON:0009663,2.08e-07,3;UBERON:0009661,2.08e-07,3;UBERON:0000125,2.08e-07,3;UBERON:0002308,2.08e-07,3;UBERON:0000119,2.44e-07,176|phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53077922271926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0.367093504323363,2.34717403304412,0.436050312760893,0.439372365468944,0.194429899074283,0,0,0,0,0,0,0,0,0.606949382578793,3.70293685490423,0,0,0,0,0,0,0.299600110518405,0,0.207379224616955,0.135005938331691,0,2.57085885963423,0.883474163806454,0.122490799214954,0,0,11.0115880999389,6.89511625660014,13.9781945263182,1.45074916503213,1.9212405156506,2.08365348222704,11.725685958058,4.50210088025344,5.65353516774197,1.47314292736834,3.84403538157578,1.4911955666024,0.151452386666368,0.604572480854284,0,0,0,0,0,0,0.702222100658759,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0,0.304465478312141,0,0,0,0,0,0,0.884610551949874,0,0.220841518460394,0,0,7.61230072230023,6.0739544975902,0,0,0,0,14.9790639404823,6.40500843946077,0.251308704225729,10.7771078519211,10.7400492078739,13.9217989854905,7.13861557498134,0,0.248813941220186,0,0.841767423545896,0,0,0,0.150704817835715,0.612328492361951,1.40925092313335,0.562210347358373,2.06962696591213,0,0,0,0,0,0.348252166522167,0,0,0,0,0,0,0,0.180062061461015,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,5.25724871410318,1.74937841044784,0,0,0,0,0,0,0,0,0,0,0.251335208800269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,23.6009367282054,18.4022347949759,0.819674726883377,0,0,0,0,0,0,0.566153061577665,0,0,0,2.24924921495265,0,0.178065603667255,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0,0,0.164549020602121,0,0,0,0,0,0,0,0,0,0,20.9530591271876,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.453460767230423,0,0,0,0,0,0,0,0,3.3885110557024,5.52390283808612,2.29158205375759,4.64003592327956,5.48066015816514,3.7769694869485,4.05013500139084,7.20513925158753,8.60970577069989,5.69536342927002,0.31136204275253,1.59609949360412,0.853668028770671,0.486213434136588,0.838452650511929,0,0.44449345560323,0,0.64183841918363,0.252697211763798,0,0.377252682772152,0.0936415074698824,0.192075457214608,0.459483751644906,0.476293691283074,0.695305955669133,0.192909220463705,0.824171801606613,0.147198920134397,0.342869252385415,0.177475806159338,0.476872379894642,0.290692833264657,0.376437521661322,0.0846146078916765,0.182927972872773,0,0,0,0.949080144993393,0.0985044823755635,0,0,0,0,0,0.214871054048298,0,0.220591419119515,0.463735671240843|short_description=p5@Rcan2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:53901 | |||
|HGNC= | |||
|MCL_coexpression_id=20 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q9JHG2,uniprot:Q543P2 | |||
|association_with_transcript=167bp_to_ENSMUST00000044792,NM_030598,uc008cpq.1_5end | |||
|cluster_id=chr17:44090307..44090318,+ | |||
|description=CAGE_peak_5_at_Rcan2_5end | |||
|id=chr17:44090307..44090318,+ | |||
|ontology_enrichment_celltype=CL:0000117!1.62e-11!23;CL:0000337!1.62e-11!23;CL:0002319!9.20e-10!43;CL:0000221!2.40e-09!44;CL:0000133!2.40e-09!44;CL:0000055!1.51e-08!50;CL:0000540!5.70e-08!33;CL:0000047!5.70e-08!33;CL:0000031!5.70e-08!33;CL:0000404!5.70e-08!33;CL:0000393!4.33e-07!39;CL:0000211!4.33e-07!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,9.29e-15,23;CL:0000337,9.29e-15,23;CL:0000540,2.53e-09,33;CL:0000047,2.53e-09,33;CL:0000031,2.53e-09,33;CL:0000404,2.53e-09,33;CL:0002610,6.83e-08,3;CL:0002319,1.56e-07,43;CL:0000393,2.02e-07,39;CL:0000211,2.02e-07,39;CL:0002614,2.08e-07,3;CL:0000221,2.74e-07,44;CL:0000133,2.74e-07,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!2.73e-27!63;UBERON:0001049!5.22e-27!52;UBERON:0005068!5.22e-27!52;UBERON:0006241!5.22e-27!52;UBERON:0007135!5.22e-27!52;UBERON:0000073!6.00e-27!75;UBERON:0001016!6.00e-27!75;UBERON:0001017!7.07e-26!73;UBERON:0005743!7.07e-26!73;UBERON:0000955!9.72e-26!50;UBERON:0006238!9.72e-26!50;UBERON:0002616!6.94e-25!49;UBERON:0002346!2.90e-23!71;UBERON:0003075!2.90e-23!71;UBERON:0007284!2.90e-23!71;UBERON:0004121!2.50e-22!102;UBERON:0000924!2.50e-22!102;UBERON:0006601!2.50e-22!102;UBERON:0002020!8.83e-22!34;UBERON:0003056!2.85e-18!49;UBERON:0002791!8.58e-18!29;UBERON:0003528!8.58e-18!29;UBERON:0001893!8.58e-18!29;UBERON:0003080!1.39e-16!40;UBERON:0002780!1.27e-15!39;UBERON:0001890!1.27e-15!39;UBERON:0006240!1.27e-15!39;UBERON:0007811!2.24e-15!86;UBERON:0000153!1.95e-13!94;UBERON:0003076!1.20e-11!12;UBERON:0003057!1.20e-11!12;UBERON:0000956!1.97e-11!21;UBERON:0001869!1.97e-11!21;UBERON:0000203!1.97e-11!21;UBERON:0002619!9.45e-11!17;UBERON:0002021!2.10e-10!10;UBERON:0000411!2.10e-10!10;UBERON:0001950!2.10e-10!10;UBERON:0002420!8.44e-08!8;UBERON:0007245!8.44e-08!8;UBERON:0010009!8.44e-08!8;UBERON:0010011!8.44e-08!8;UBERON:0000454!8.44e-08!8;UBERON:0002298!1.28e-07!6;UBERON:0000025!3.15e-07!114;UBERON:0004111!7.05e-07!122;UBERON:0004733!7.74e-07!6;UBERON:0004732!7.74e-07!6;UBERON:0002028!7.74e-07!6;UBERON:0007277!7.74e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,9.87e-43,54;UBERON:0001049,7.51e-39,52;UBERON:0005068,7.51e-39,52;UBERON:0006241,7.51e-39,52;UBERON:0007135,7.51e-39,52;UBERON:0001017,5.66e-36,73;UBERON:0001016,8.57e-35,75;UBERON:0002346,3.46e-34,64;UBERON:0003075,3.46e-34,64;UBERON:0007284,3.46e-34,64;UBERON:0000955,6.00e-33,47;UBERON:0006238,6.00e-33,47;UBERON:0002616,2.20e-31,46;UBERON:0002020,4.71e-30,34;UBERON:0010371,5.47e-29,73;UBERON:0004121,6.10e-29,95;UBERON:0000924,6.10e-29,95;UBERON:0006601,6.10e-29,95;UBERON:0003528,7.95e-25,29;UBERON:0002791,7.95e-25,29;UBERON:0001893,7.95e-25,29;UBERON:0003080,2.08e-23,40;UBERON:0002780,1.21e-21,39;UBERON:0001890,1.21e-21,39;UBERON:0006240,1.21e-21,39;UBERON:0003056,1.46e-21,49;UBERON:0010314,2.39e-21,92;UBERON:0002021,6.64e-20,10;UBERON:0000411,6.64e-20,10;UBERON:0001950,6.64e-20,10;UBERON:0003076,1.66e-16,12;UBERON:0003057,1.66e-16,12;UBERON:0002619,1.21e-15,17;UBERON:0000956,1.39e-14,21;UBERON:0001869,1.39e-14,21;UBERON:0000203,1.39e-14,21;UBERON:0000025,1.65e-13,114;UBERON:0004111,4.06e-12,122;UBERON:0002420,5.24e-12,8;UBERON:0007245,5.24e-12,8;UBERON:0010009,5.24e-12,8;UBERON:0010011,5.24e-12,8;UBERON:0000454,5.24e-12,8;UBERON:0004733,1.14e-09,6;UBERON:0004732,1.14e-09,6;UBERON:0002028,1.14e-09,6;UBERON:0007277,1.14e-09,6;UBERON:0002950,1.28e-09,4;UBERON:0001891,1.28e-09,4;UBERON:0009616,1.28e-09,4;UBERON:0010286,1.28e-09,4;UBERON:0002240,2.23e-08,6;UBERON:0005174,2.23e-08,6;UBERON:0001137,2.23e-08,6;UBERON:0011216,2.90e-08,194;UBERON:0004684,6.83e-08,3;UBERON:0002275,6.83e-08,3;UBERON:0000483,1.63e-07,174;UBERON:0002038,2.08e-07,3;UBERON:0009663,2.08e-07,3;UBERON:0009661,2.08e-07,3;UBERON:0000125,2.08e-07,3;UBERON:0002308,2.08e-07,3;UBERON:0000119,2.44e-07,176 | |||
|phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53077922271926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0.367093504323363,2.34717403304412,0.436050312760893,0.439372365468944,0.194429899074283,0,0,0,0,0,0,0,0,0.606949382578793,3.70293685490423,0,0,0,0,0,0,0.299600110518405,0,0.207379224616955,0.135005938331691,0,2.57085885963423,0.883474163806454,0.122490799214954,0,0,11.0115880999389,6.89511625660014,13.9781945263182,1.45074916503213,1.9212405156506,2.08365348222704,11.725685958058,4.50210088025344,5.65353516774197,1.47314292736834,3.84403538157578,1.4911955666024,0.151452386666368,0.604572480854284,0,0,0,0,0,0,0.702222100658759,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0,0.304465478312141,0,0,0,0,0,0,0.884610551949874,0,0.220841518460394,0,0,7.61230072230023,6.0739544975902,0,0,0,0,14.9790639404823,6.40500843946077,0.251308704225729,10.7771078519211,10.7400492078739,13.9217989854905,7.13861557498134,0,0.248813941220186,0,0.841767423545896,0,0,0,0.150704817835715,0.612328492361951,1.40925092313335,0.562210347358373,2.06962696591213,0,0,0,0,0,0.348252166522167,0,0,0,0,0,0,0,0.180062061461015,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,5.25724871410318,1.74937841044784,0,0,0,0,0,0,0,0,0,0,0.251335208800269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,23.6009367282054,18.4022347949759,0.819674726883377,0,0,0,0,0,0,0.566153061577665,0,0,0,2.24924921495265,0,0.178065603667255,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0,0,0.164549020602121,0,0,0,0,0,0,0,0,0,0,20.9530591271876,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.453460767230423,0,0,0,0,0,0,0,0,3.3885110557024,5.52390283808612,2.29158205375759,4.64003592327956,5.48066015816514,3.7769694869485,4.05013500139084,7.20513925158753,8.60970577069989,5.69536342927002,0.31136204275253,1.59609949360412,0.853668028770671,0.486213434136588,0.838452650511929,0,0.44449345560323,0,0.64183841918363,0.252697211763798,0,0.377252682772152,0.0936415074698824,0.192075457214608,0.459483751644906,0.476293691283074,0.695305955669133,0.192909220463705,0.824171801606613,0.147198920134397,0.342869252385415,0.177475806159338,0.476872379894642,0.290692833264657,0.376437521661322,0.0846146078916765,0.182927972872773,0,0,0,0.949080144993393,0.0985044823755635,0,0,0,0,0,0.214871054048298,0,0.220591419119515,0.463735671240843 | |||
|short_description=p5@Rcan2 | |||
}} |
Revision as of 22:20, 4 August 2015
Short description: | p5@Rcan2 |
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Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Rcan2_5end |
Coexpression cluster: | MCL_coexpression_mm9:20 |
Association with transcript: | 167bp_to_ENSMUST00000044792, NM_030598, uc008cpq.1_5end |
EntrezGene: | 53901 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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CNS neuron (sensu Vertebrata) | 9.29e-15 | 23 |
neuroblast (sensu Vertebrata) | 9.29e-15 | 23 |
neuron | 2.53e-09 | 33 |
neuronal stem cell | 2.53e-09 | 33 |
neuroblast | 2.53e-09 | 33 |
electrically signaling cell | 2.53e-09 | 33 |
raphe nuclei neuron | 6.83e-08 | 3 |
neural cell | 1.56e-07 | 43 |
electrically responsive cell | 2.02e-07 | 39 |
electrically active cell | 2.02e-07 | 39 |
neuron of the substantia nigra | 2.08e-07 | 3 |
ectodermal cell | 2.74e-07 | 44 |
neurectodermal cell | 2.74e-07 | 44 |