FF:11338-117F6: Difference between revisions

Revision as of 20:40, 9 July 2012

Name:	Chondrocyte - de diff, donor2
Species:	Human (Homo sapiens)
Library ID:	{{{library_id}}}
Sample type:	{{{sample_category}}}
Genomic View:	UCSC
CAGEd-oPOSSUM:	link

Additional information

Sample information

strain	NA
tissue	cartilage
dev stage	60 years old adult
sex	male
age	60
cell type	chondroblast
cell line	NA
company	Cell Applications
collaboration	FANTOM5 OSC CORE (contact: Al Forrest)
External link for information	[{{{sample_info_link}}} {{{sample_info_link}}}]

RNA information

lot number	1662
catalog number	CA402-R10a
sample type	total RNA
extraction protocol (Details)	OP-RNA-extraction-totalRNA-TRIzol-isopropanol-v1.0

Download raw sequence, BAM & CTSS

Hg19

BAM	CTSS
[{{{hg19bam}}} download]	[{{{hg19ctss}}} donwload]

Hg38

BAM	CTSS
[{{{hg38bam}}} download]	[{{{hg38ctss}}} donwload]

Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.

Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. Analyst:NA link to dataset. data

Coexpression cluster	score
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral	0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate	0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural	0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial	0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel	0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS	0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils	0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural	0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis	-0.166
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy	0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood	0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate	0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma	-0.284
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial	0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic	0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat	0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal	0
C113-thyroid-throat-lung-lymph-small-colon-trachea	0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma	0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus	0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea	0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal	0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula	0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD19	0
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils	0
C120-immature-salivary-tongue-skin-cervical-CD14-CD34	0
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B	0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal	0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils	0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte	0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus	0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain	0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil	0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP	0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small	0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD4	0
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar	0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin	0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived	0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma	0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis	0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum	0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal	0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic	0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal	0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal	0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen	0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen	0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B	0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair	0.478
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast	0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis	0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal	0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell	0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral	0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal	0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum	0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue	0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small	0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast	0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung	0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular	0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate	0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid	0
C156-plasma-splenic-hereditary-B-large-xeroderma-b	0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea	0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen	0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal	0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain	0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral	0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta	0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon	0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal	0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma	0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial	0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung	0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD4	0
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral	0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma	0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage	0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet	0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye	0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes	0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose	0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils	0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural	0
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19	-0.175
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous	0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus	0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil	0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood	0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle	-0.171
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar	0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute	0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt	0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid	0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis	0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid	0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage	0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat	0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen	0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma	0
C190-colon-small-rectum-duodenum-appendix-temporal-oral	0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic	0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD4	0
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD14	0.129
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar	0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal	0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial	0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival	0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes	0.545
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma	0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast	0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat	0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed	0.274
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall	0
C202-salivary-skin-penis-tongue-uterus-cervical-immature	0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic	0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD34	0
C205-mycosis-cord-hairy-xeroderma-CD4-B-b	0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary	0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte	0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous	0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen	0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic	0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil	0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney	0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD34	0
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral	0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain	0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature	0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD34	0
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital	0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary	0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum	0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD19	0
C220-Adipocyte-mature-left-breast-skin-liver-adipose	0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular	0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte	0.245
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte	1.115
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal	0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal	0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal	0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue	0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult	0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart	0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD14	0
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung	0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis	0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum	0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF7	0
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma	0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas	0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma	0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial	0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell	0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy	0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral	0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal	0.302
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus	-0.318
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach	0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing	0.302
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage	0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic	0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory	0
C247-pons-locus-medulla-spinal-paracentral-medial-occipital	0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast	0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial	0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall	0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD4	0
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue	0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma	0.176
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum	0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris	0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast	0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla	0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral	0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric	0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing	0.399
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole	0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood	0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal	0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms	0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil	0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute	0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD8	0
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast	0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear	0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate	0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD4	0
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung	0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth	0
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum	0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil	0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast	0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte	0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal	0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal	0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma	0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory	0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial	0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic	0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD4	0
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small	-0.346
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat	0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular	0.677
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus	0.153
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic	0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial	0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal	0.176
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal	0.654
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left	0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart	0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature	0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea	0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal	0.438
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD34	0
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral	0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte	0.861
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed	0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral	0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital	0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood	0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala	0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal	0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils	0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic	0.382
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid	0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole	0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus	0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea	0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory	0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen	0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile	0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula	0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt	0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea	0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms	0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD133	0
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus	0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small	0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal	0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon	0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder	0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature	0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS	0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel	0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix	0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus	0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma	0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas	0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma	0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas	0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma	0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary	0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature	0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma	0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue	0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural	0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H9	0
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic	0.7
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature	0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical	0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b	0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph	0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute	0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic	0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils	0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus	0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung	0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma	0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK	0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast	0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue	0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate	0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left	0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal	0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy	0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral	0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell	0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD8	0
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea	0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal	0.399
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD34	0
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast	0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid	0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD34	0
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic	0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon	0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma	0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma	0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic	0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived	0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic	0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left	0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen	0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair	0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole	0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular	0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma	0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid	0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix	0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain	0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole	0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid	0

Repeat families with enriched expression in this sampleSummary:Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed. Analyst:NA link to dataset. data no result for this sample

TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifsSummary:Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression Analyst: Michiel de Hoon link to dataset. data

library id: CNhs11372

Jaspar motif	Logo	P-value
MA0002.2	MA0002.2	0.957
MA0003.1	MA0003.1	0.165
MA0004.1	MA0004.1	0.487
MA0006.1	MA0006.1	0.198
MA0007.1	MA0007.1	0.932
MA0009.1	MA0009.1	0.127
MA0014.1	MA0014.1	0.346
MA0017.1	MA0017.1	0.887
MA0018.2	MA0018.2	6.39224e-4
MA0019.1	MA0019.1	0.647
MA0024.1	MA0024.1	4.19831e-5
MA0025.1	MA0025.1	0.331
MA0027.1	MA0027.1	0.537
MA0028.1	MA0028.1	0.0604
MA0029.1	MA0029.1	0.535
MA0030.1	MA0030.1	0.664
MA0031.1	MA0031.1	0.602
MA0035.2	MA0035.2	0.158
MA0038.1	MA0038.1	0.0406
MA0039.2	MA0039.2	0.257
MA0040.1	MA0040.1	0.359
MA0041.1	MA0041.1	0.236
MA0042.1	MA0042.1	0.414
MA0043.1	MA0043.1	0.00189
MA0046.1	MA0046.1	0.316
MA0047.2	MA0047.2	0.308
MA0048.1	MA0048.1	0.291
MA0050.1	MA0050.1	0.0205
MA0051.1	MA0051.1	0.683
MA0052.1	MA0052.1	0.946
MA0055.1	MA0055.1	0.921
MA0057.1	MA0057.1	0.426
MA0058.1	MA0058.1	0.432
MA0059.1	MA0059.1	0.7
MA0060.1	MA0060.1	9.66956e-8
MA0061.1	MA0061.1	0.5
MA0062.2	MA0062.2	2.69705e-6
MA0065.2	MA0065.2	0.921
MA0066.1	MA0066.1	0.481
MA0067.1	MA0067.1	0.0327
MA0068.1	MA0068.1	0.713
MA0069.1	MA0069.1	0.141
MA0070.1	MA0070.1	0.945
MA0071.1	MA0071.1	0.306
MA0072.1	MA0072.1	0.6
MA0073.1	MA0073.1	0.799
MA0074.1	MA0074.1	0.697
MA0076.1	MA0076.1	0.019
MA0077.1	MA0077.1	0.184
MA0078.1	MA0078.1	0.563
MA0079.2	MA0079.2	0.936
MA0080.2	MA0080.2	8.49596e-9
MA0081.1	MA0081.1	0.00154
MA0083.1	MA0083.1	0.00143
MA0084.1	MA0084.1	0.792
MA0087.1	MA0087.1	0.776
MA0088.1	MA0088.1	0.846
MA0090.1	MA0090.1	1.96332e-5
MA0091.1	MA0091.1	0.0552
MA0092.1	MA0092.1	0.113
MA0093.1	MA0093.1	0.459
MA0099.2	MA0099.2	0.746
MA0100.1	MA0100.1	0.417
MA0101.1	MA0101.1	0.0419
MA0102.2	MA0102.2	0.4
MA0103.1	MA0103.1	0.00767
MA0104.2	MA0104.2	0.114
MA0105.1	MA0105.1	0.604
MA0106.1	MA0106.1	0.0338
MA0107.1	MA0107.1	0.0725
MA0108.2	MA0108.2	0.00241
MA0111.1	MA0111.1	0.133
MA0112.2	MA0112.2	6.00625e-4
MA0113.1	MA0113.1	0.334
MA0114.1	MA0114.1	0.685
MA0115.1	MA0115.1	0.365
MA0116.1	MA0116.1	0.576
MA0117.1	MA0117.1	0.539
MA0119.1	MA0119.1	0.382
MA0122.1	MA0122.1	0.714
MA0124.1	MA0124.1	0.688
MA0125.1	MA0125.1	0.466
MA0131.1	MA0131.1	0.206
MA0135.1	MA0135.1	0.698
MA0136.1	MA0136.1	3.73614e-8
MA0137.2	MA0137.2	0.877
MA0138.2	MA0138.2	0.27
MA0139.1	MA0139.1	0.787
MA0140.1	MA0140.1	0.322
MA0141.1	MA0141.1	0.211
MA0142.1	MA0142.1	0.144
MA0143.1	MA0143.1	0.843
MA0144.1	MA0144.1	0.855
MA0145.1	MA0145.1	0.102
MA0146.1	MA0146.1	0.232
MA0147.1	MA0147.1	0.175
MA0148.1	MA0148.1	0.253
MA0149.1	MA0149.1	0.666
MA0150.1	MA0150.1	0.2
MA0152.1	MA0152.1	0.056
MA0153.1	MA0153.1	0.117
MA0154.1	MA0154.1	0.177
MA0155.1	MA0155.1	0.0674
MA0156.1	MA0156.1	9.97812e-7
MA0157.1	MA0157.1	0.301
MA0159.1	MA0159.1	0.469
MA0160.1	MA0160.1	0.998
MA0162.1	MA0162.1	0.0585
MA0163.1	MA0163.1	0.135
MA0164.1	MA0164.1	0.729
MA0258.1	MA0258.1	0.218
MA0259.1	MA0259.1	0.355

FANTOM5 phase1 novel unique motifsSummary:Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above Analyst: Michiel de Hoon link to dataset. data

library id: CNhs11372

Novel motif	Logo	P-value
1	1	0.738
10	10	0.833
100	100	0.781
101	101	0.118
102	102	0.0624
103	103	0.114
104	104	0.556
105	105	0.688
106	106	0.201
107	107	0.0209
108	108	0.22
109	109	0.605
11	11	0.542
110	110	0.73
111	111	0.281
112	112	0.626
113	113	0.251
114	114	0.233
115	115	0.201
116	116	0.0323
117	117	0.283
118	118	0.798
119	119	0.602
12	12	0.377
120	120	0.638
121	121	0.605
122	122	0.876
123	123	0.0014
124	124	0.53
125	125	0.895
126	126	0.466
127	127	0.665
128	128	0.335
129	129	0.908
13	13	0.838
130	130	0.618
131	131	0.669
132	132	0.156
133	133	0.487
134	134	0.0712
135	135	0.112
136	136	0.419
137	137	0.535
138	138	0.421
139	139	0.35
14	14	0.599
140	140	0.116
141	141	0.507
142	142	0.714
143	143	0.644
144	144	0.369
145	145	0.649
146	146	0.587
147	147	0.459
148	148	0.0938
149	149	0.00411
15	15	0.722
150	150	0.636
151	151	0.588
152	152	0.0216
153	153	0.424
154	154	0.907
155	155	0.177
156	156	0.83
157	157	0.172
158	158	0.00909
159	159	0.343
16	16	0.0532
160	160	0.45
161	161	0.938
162	162	0.69
163	163	0.62
164	164	0.275
165	165	0.866
166	166	6.64788e-4
167	167	0.24
168	168	0.8
169	169	0.0159
17	17	0.583
18	18	0.0821
19	19	0.0078
2	2	0.426
20	20	0.165
21	21	0.427
22	22	0.064
23	23	0.0914
24	24	0.116
25	25	0.536
26	26	0.776
27	27	0.62
28	28	0.209
29	29	0.557
3	3	0.966
30	30	0.0914
31	31	0.518
32	32	3.88982e-14
33	33	0.823
34	34	0.377
35	35	0.863
36	36	0.0993
37	37	0.324
38	38	0.932
39	39	0.232
4	4	0.636
40	40	0.777
41	41	0.548
42	42	0.675
43	43	0.219
44	44	0.749
45	45	0.411
46	46	0.344
47	47	0.641
48	48	0.91
49	49	0.617
5	5	0.356
50	50	0.374
51	51	0.641
52	52	0.413
53	53	0.28
54	54	0.405
55	55	0.797
56	56	0.786
57	57	0.724
58	58	0.479
59	59	0.0339
6	6	0.404
60	60	0.535
61	61	0.54
62	62	0.729
63	63	0.239
64	64	0.782
65	65	0.148
66	66	0.24
67	67	0.674
68	68	0.373
69	69	0.0976
7	7	0.955
70	70	0.0389
71	71	0.48
72	72	0.593
73	73	0.0192
74	74	0.611
75	75	0.767
76	76	0.929
77	77	0.0128
78	78	0.152
79	79	0.0176
8	8	0.205
80	80	0.969
81	81	0.465
82	82	0.181
83	83	0.617
84	84	0.301
85	85	0.0195
86	86	0.491
87	87	0.22
88	88	0.187
89	89	0.0219
9	9	0.344
90	90	0.178
91	91	0.917
92	92	0.365
93	93	0.71
94	94	0.613
95	95	0.655
96	96	0.943
97	97	0.417
98	98	0.488
99	99	0.0214

de novo motifs identified by HOMER in promoters active in this sampleSummary:The result of HOMER in this sample is shown. Analyst:NA library id: CNhs11372

FANTOM5 (FF) ontology

Direct parent terms

is_a relathionship
EFO:0002091 biological replicate
FF:0000246 human chondrocyte de-differentiated sample

Ancestor terms (non development)Summary:Connected ontology terms with is_a, part_of or located_in relationship Analyst: Hideya Kawaji link to source data data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000548 (animal cell)
0000151 (secretory cell)
0002320 (connective tissue cell)
0002371 (somatic cell)
0000499 (stromal cell)
0000153 (GAG secreting cell)
0000667 (collagen secreting cell)
0000327 (extracellular matrix secreting cell)
0000447 (carbohydrate secreting cell)
0000255 (eukaryotic cell)
0000138 (chondrocyte)

UBERON: Anatomy
0002384 (connective tissue)
0000479 (tissue)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0001062 (anatomical entity)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000037 (human chondrocyte sample)
0000246 (human chondrocyte de-differentiated sample)

Ancestor terms (development)Summary:Connected ontology terms with develops_from, derives_from or preceded_by relationship Analyst: Hideya Kawaji link to source data data
CL:0000134 (mesenchymal cell)

@@ Line 10: / Line 10: @@
 |def=
 |expression_enrichment_score=chr9:132427883..132427951,+!p2@PRRX2!1.88!75.20!PRRX2;;chr9:96717629..96717644,-!p1@BARX1!1.78!59.16!BARX1;;chr9:132427972..132428056,+!p1@PRRX2!1.75!71.19!PRRX2;;chr12:54410664..54410684,+!p1@HOXC4,p1@HOXC5,p1@HOXC6!1.63!42.11!HOXC5;;chr1:170632285..170632309,+!p1@PRRX1!1.62!45.62!PRRX1;;chr5:134369879..134369898,-!p2@PITX1!1.61!40.11!PITX1;;chr5:134369905..134369972,-!p1@PITX1!1.59!57.65!PITX1;;chr11:46299199..46299233,+!p1@CREB3L1!1.53!162.43!CREB3L1;;chr6:19837592..19837621,+!p1@ID4!1.52!189.00!ID4;;chr2:85981107..85981120,+!p3@ATOH8!1.49!29.58!ATOH8;;chr2:45236540..45236577,-!p1@SIX2!1.46!27.57!SIX2;;chr14:61116183..61116208,-!p1@SIX1!1.43!96.26!SIX1;;chr1:170633348..170633399,+!p2@PRRX1!1.43!35.09!PRRX1;;chr7:19157248..19157268,-!p1@TWIST1!1.42!69.18!TWIST1;;chr6:1610293..1610310,+!p1@FOXC1!1.38!38.10!FOXC1;;chr19:13134772..13134822,+!p2@NFIX!1.34!30.58!NFIX;;chr10:63809013..63809041,+!p3@ARID5B!1.31!105.78!ARID5B;;chr17:59477233..59477263,+!p1@TBX2!1.28!55.65!TBX2;;chr1:54204818..54204870,-!p@chr1:54204818..54204870,-!1.22!16.54!GLIS1;;chr1:44513995..44514031,+!p1@KLF17!1.21!15.04!KLF17;;chr21:39821025..39821046,-!p9@ERG!1.19!14.54!ERG;;chr11:46299539..46299620,+!p2@CREB3L1!1.17!23.06!CREB3L1;;chr1:170632477..170632506,+!p6@PRRX1!1.16!13.54!PRRX1;;chr12:54378923..54378966,+!p1@HOXC10!1.13!12.53!HOXC10;;chr12:53614115..53614154,-!p1@RARG!1.12!65.68!RARG;;chr12:54410639..54410659,+!p2@HOXC4,p2@HOXC5,p2@HOXC6!1.12!12.03!HOXC5;;chr7:27224795..27224840,-!p2@HOXA11!1.12!12.03!HOXA11;;chr2:85981073..85981091,+!p5@ATOH8!1.12!12.03!ATOH8;;chr2:19558373..19558392,-!p1@OSR1!1.11!32.59!OSR1;;chr11:125034640..125034655,+!p1@PKNOX2!1.10!11.53!PKNOX2;;chr12:54380404..54380433,+!p3@HOXC10!1.10!11.53!HOXC10;;chr8:67525443..67525459,-!p2@MYBL1!1.08!16.54!MYBL1;;chr14:24837368..24837401,+!p1@NFATC4!1.07!25.57!NFATC4;;chr2:85980951..85981004,+!p1@ATOH8!1.07!17.55!ATOH8;;chr15:66994663..66994680,+!p1@SMAD6!1.06!25.07!SMAD6;;chr1:170632959..170632987,+!p4@PRRX1!1.06!11.53!PRRX1;;chr8:49833948..49833973,-!p2@SNAI2!1.04!63.67!SNAI2;;chr7:15726296..15726315,-!p1@MEOX2!1.04!10.03!MEOX2;;chr12:54402745..54402788,+!p1@HOXC8!1.04!10.03!HOXC8;;chr1:170633058..170633084,+!p5@PRRX1!1.04!10.03!PRRX1;;chr15:66994561..66994597,+!p2@SMAD6!1.03!23.56!SMAD6;;chr7:44143925..44143970,+!p1@AEBP1!1.02!214.57!AEBP1;;chr7:17338266..17338282,+!p1@AHR!1.02!104.78!AHR;;chr2:239756739..239756755,+!p2@TWIST2!1.02!16.54!TWIST2;;chr7:27224842..27224872,-!p1@HOXA11!1.02!9.53!HOXA11;;chr10:63809077..63809089,+!p5@ARID5B!1.00!20.05!ARID5B;;chr7:27192185..27192209,-!p1@HOXA3!1.00!9.02!HOXA3;;chr7:27213893..27213954,-!p1@HOXA10!1.00!9.02!HOXA10;;chr2:46524537..46524553,+!p1@EPAS1!0.99!891.38!EPAS1;;chr10:63809106..63809127,+!p1@ARID5B!0.98!117.81!ARID5B;;chr2:239756671..239756732,+!p1@TWIST2!0.98!28.07!TWIST2;;chr9:96717678..96717689,-!p2@BARX1!0.98!8.52!BARX1;;chr6:1312325..1312340,+!p1@FOXQ1!0.96!13.54!FOXQ1;;chr5:158526459..158526481,-!p2@EBF1!0.96!11.03!EBF1;;chr17:59477275..59477286,+!p3@TBX2!0.96!11.03!TBX2;;chr1:170632250..170632277,+!p7@PRRX1!0.96!8.02!PRRX1;;chr12:54379029..54379057,+!p2@HOXC10!0.96!8.02!HOXC10;;chr8:49833978..49833996,-!p1@SNAI2!0.95!167.95!SNAI2;;chr5:158526917..158526932,-!p1@EBF1!0.95!20.05!EBF1;;chr6:1389789..1389821,+!p1@FOXF2!0.95!11.03!FOXF2;;chr16:86600426..86600441,+!p1@FOXC2!0.94!19.55!FOXC2;;chr15:67458491..67458505,+!p18@SMAD3!0.93!7.52!SMAD3;;chr7:15726243..15726293,-!p2@MEOX2!0.93!7.52!MEOX2;;chr1:170632723..170632739,+!p8@PRRX1!0.93!7.52!PRRX1;;chr18:22932080..22932170,-!p1@ZNF521!0.92!32.59!ZNF521;;chr5:321810..321877,+!p1@AHRR!0.91!23.56!AHRR;;chr15:66994615..66994630,+!p3@SMAD6!0.91!10.53!SMAD6;;chr1:23885981..23886002,-!p1@ID3!0.90!1263.87!ID3;;chr3:157823517..157823562,-!p1@SHOX2!0.90!7.52!SHOX2;;chr16:86600870..86600921,+!p2@FOXC2!0.90!7.02!FOXC2;;chr7:17338324..17338341,+!p3@AHR!0.89!23.56!AHR;;chr7:44143978..44143989,+!p2@AEBP1!0.88!12.53!AEBP1;;chr2:85980919..85980942,+!p4@ATOH8!0.88!7.02!ATOH8;;chr12:54393880..54393962,+!p1@HOXC9!0.88!6.52!HOXC9;;chr1:2985760..2985774,+!p1@PRDM16!0.88!6.52!PRDM16;;chr21:40032558..40032578,-!p5@ERG!0.88!6.52!ERG;;chr10:77161504..77161530,-!p1@ZNF503!0.87!90.24!ZNF503;;chr2:85981222..85981259,+!p2@ATOH8!0.86!10.53!ATOH8;;chr11:65687362..65687436,+!p3@DRAP1!0.85!29.58!DRAP1;;chr1:170633262..170633285,+!p3@PRRX1!0.85!7.02!PRRX1;;chr1:170632439..170632465,+!p11@PRRX1!0.85!6.02!PRRX1;;chr21:40032884..40032915,-!p2@ERG!0.85!6.02!ERG;;chr2:45236579..45236596,-!p2@SIX2!0.85!6.02!SIX2;;chr17:59529743..59529798,+!p1@TBX4!0.85!6.02!TBX4;;chr1:170632115..170632136,+!p9@PRRX1!0.81!5.51!PRRX1;;chr21:40033695..40033712,-!p6@ERG!0.81!5.51!ERG;;chr8:99956662..99956684,+!p1@OSR2!0.80!8.52!OSR2;;chr6:1612248..1612281,+!p2@FOXC1!0.78!5.51!FOXC1;;chr1:170632137..170632172,+!p10@PRRX1!0.78!5.01!PRRX1;;chr15:66994718..66994729,+!p4@SMAD6!0.78!5.01!SMAD6;;chr17:48072574..48072597,-!p1@DLX3!0.78!5.01!DLX3;;chr2:176994408..176994492,+!p1@HOXD8!0.78!5.01!HOXD8;;chr1:8938709..8938720,-!p3@ENO1!0.77!260.70!ENO1;;chr15:42749722..42749739,-!p2@ZFP106!0.74!8.52!ZFP106;;chr10:63809090..63809097,+!p7@ARID5B!0.74!6.52!ARID5B;;chr10:131762504..131762555,-!p1@EBF3!0.74!4.51!EBF3;;chr2:85981027..85981047,+!p8@ATOH8!0.74!4.51!ATOH8;;chr3:42695180..42695201,+!p2@ZBTB47!0.74!4.51!ZBTB47;;chr6:1389989..1390019,+!p2@FOXF2!0.74!4.51!FOXF2;;chr7:27196267..27196311,-!p1@HOXA7!0.74!4.51!HOXA7;;chr18:22932004..22932021,-!p2@ZNF521!0.74!4.51!ZNF521;;chr21:40032581..40032605,-!p4@ERG!0.74!4.51!ERG;;chr7:19157043..19157088,-!p2@TWIST1!0.73!12.03!TWIST1;;chr19:13136130..13136165,+!p6@NFIX!0.73!6.02!NFIX;;chr2:191878874..191878938,-!p1@STAT1!0.72!261.20!STAT1;;chr1:935467..935484,-!p1@HES4!0.72!21.06!HES4;;chr6:85474299..85474324,-!p1@TBX18!0.72!8.02!TBX18;;chr5:72744445..72744466,-!p2@FOXD1!0.72!7.52!FOXD1;;chr9:4300050..4300118,-!p1@GLIS3!0.71!30.58!GLIS3;;chr7:28448965..28448994,+!p2@CREB5!0.71!16.04!CREB5;;chr17:59477197..59477212,+!p2@TBX2!0.71!7.52!TBX2;;chr19:13106214..13106382,+!p1@NFIX!0.70!106.78!NFIX;;chr4:81118647..81118666,+!p1@PRDM8!0.70!5.51!PRDM8;;chr2:85981008..85981025,+!p7@ATOH8!0.70!4.01!ATOH8;;chr7:27205106..27205134,-!p2@HOXA9!0.70!4.01!HOXA9;;chr11:46299443..46299459,+!p4@CREB3L1!0.70!4.01!CREB3L1;;chr14:95236440..95236465,-!p1@GSC!0.70!4.01!GSC;;chr5:72744594..72744609,-!p1@FOXD1!0.68!19.55!FOXD1;;chr19:13134457..13134462,+!p5@NFIX!0.67!7.02!NFIX;;chr12:48298785..48298828,-!p1@VDR!0.66!21.56!VDR;;chr20:48807548..48807572,+!p14@CEBPB!0.66!4.51!CEBPB;;chr19:36134528..36134563,+!p1@ETV2!0.65!11.03!ETV2;;chr18:53068911..53068935,-!p4@TCF4!0.65!4.01!TCF4;;chr16:31076332..31076388,-!p3@ZNF668!0.65!3.51!ZNF668;;chr6:1612300..1612324,+!p3@FOXC1!0.65!3.51!FOXC1;;chr7:27196217..27196246,-!p2@HOXA7!0.65!3.51!HOXA7;;chr7:27205136..27205164,-!p1@HOXA9!0.65!3.51!HOXA9;;chr1:170632683..170632696,+!p12@PRRX1!0.65!3.51!PRRX1;;chr21:38071430..38071456,+!p1@SIM2!0.65!3.51!SIM2;;chr12:54380036..54380091,+!p4@HOXC10!0.65!3.51!HOXC10;;chr6:21593973..21593988,+!p1@SOX4!0.64!144.39!SOX4;;chr14:62162285..62162296,+!p3@HIF1A!0.64!20.55!HIF1A;;chr12:125003087..125003141,-!p4@NCOR2!0.64!4.51!NCOR2;;chr10:77161533..77161546,-!p2@ZNF503!0.63!15.04!ZNF503;;chr8:116681409..116681431,-!p2@TRPS1!0.63!10.03!TRPS1;;chr16:79633894..79633954,-!p3@MAF!0.63!7.02!MAF;;chr6:21597765..21597779,+!p2@SOX4!0.62!30.08!SOX4;;chr5:139487608..139487663,+!p3@PURA!0.62!7.52!PURA;;chr16:79634624..79634642,-!p1@MAF!0.61!14.04!MAF;;chr10:63809134..63809145,+!p6@ARID5B!0.61!8.02!ARID5B;;chr11:46299186..46299195,+!p3@CREB3L1!0.61!3.51!CREB3L1;;chr3:21792585..21792625,-!p2@ZNF385D!0.61!3.51!ZNF385D;;chr12:48298765..48298783,-!p2@VDR!0.60!7.02!VDR;;chr16:54320101..54320125,-!p4@IRX3!0.60!4.51!IRX3;;chr16:54320617..54320643,-!p3@IRX3!0.60!4.01!IRX3;;chr1:23694556..23694584,-!p6@ZNF436!0.60!4.01!ZNF436;;chr2:45236809..45236823,-!p4@SIX2!0.60!3.01!SIX2;;chr6:1612219..1612239,+!p8@FOXC1!0.60!3.01!FOXC1;;chr7:15725757..15725828,-!p5@MEOX2!0.60!3.01!MEOX2;;chr7:15726176..15726191,-!p3@MEOX2!0.60!3.01!MEOX2;;chr7:27212407..27212421,-!p9@HOXA10!0.60!3.01!HOXA10;;chr15:66994885..66994904,+!p7@SMAD6!0.60!3.01!SMAD6;;chr19:13135386..13135435,+!p4@NFIX!0.60!3.01!NFIX;;chr10:63853436..63853442,+!p4@ARID5B!0.59!18.55!ARID5B;;chr13:37494365..37494381,-!p1@SMAD9!0.59!5.51!SMAD9;;chr6:21597370..21597408,+!p5@SOX4!0.59!5.01!SOX4;;chr2:46524865..46524870,+!p9@EPAS1!0.59!3.51!EPAS1;;chr18:77155922..77155939,+!p1@NFATC1!0.58!9.02!NFATC1;;chr12:53625966..53626012,-!p2@RARG!0.58!8.52!RARG;;chr15:80696703..80696754,+!p1@ARNT2!0.58!4.01!ARNT2;;chr19:13136241..13136258,+!p7@NFIX!0.58!4.01!NFIX;;chr14:75894714..75894733,+!p1@JDP2!0.57!94.75!JDP2;;chr9:35732647..35732678,+!p2@CREB3!0.57!18.55!CREB3;;chr22:41777927..41777971,+!p1@TEF!0.56!27.57!TEF;;chr10:44144264..44144286,-!p2@ZNF32!0.56!6.52!ZNF32;;chr11:65686802..65686818,+!p6@DRAP1!0.55!5.01!DRAP1;;chr12:80085061..80085119,-!p6@PAWR!0.55!4.51!PAWR;;chr14:61116168..61116180,-!p2@SIX1!0.55!3.01!SIX1;;chr15:83953397..83953425,-!p1@BNC1!0.55!3.01!BNC1;;chr1:8938736..8938756,-!p1@ENO1!0.54!3464.75!ENO1;;chr19:47922750..47922795,-!p1@MEIS3!0.54!4.51!MEIS3;;chr6:21597283..21597312,+!p7@SOX4!0.54!3.51!SOX4;;chr5:134369973..134369984,-!p3@PITX1!0.54!2.51!PITX1;;chr7:15726220..15726236,-!p4@MEOX2!0.54!2.51!MEOX2;;chr7:27195867..27195893,-!p3@HOXA7!0.54!2.51!HOXA7;;chr1:119530636..119530653,-!p2@TBX15!0.54!2.51!TBX15;;chr1:119530857..119530884,-!p4@TBX15!0.54!2.51!TBX15;;chr11:125034586..125034604,+!p3@PKNOX2!0.54!2.51!PKNOX2;;chr11:125034605..125034636,+!p2@PKNOX2!0.54!2.51!PKNOX2;;chr12:80085120..80085156,-!p14@PAWR!0.54!2.51!PAWR;;chr17:59477266..59477273,+!p6@TBX2!0.54!2.51!TBX2;;chr18:42260840..42260860,+!p2@SETBP1!0.54!2.51!SETBP1;;chr2:45236648..45236659,-!p5@SIX2!0.54!2.51!SIX2;;chr2:85981271..85981289,+!p9@ATOH8!0.54!2.51!ATOH8;;chrY:2803415..2803468,+!p1@ZFY!0.54!2.51!ZFY;;chr9:129376201..129376225,+!p1@LMX1B!0.54!2.51!LMX1B;;chrY:21906594..21906622,-!p1@KDM5D!0.54!2.51!KDM5D;;chr5:43067636..43067674,+!p6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!0.50!NPAS2;;chr2:102091144..102091183,-!p2@RFX8!0.18!0.50!RFX8;;chr2:113994526..113994556,-!p3@PAX8!0.18!0.50!PAX8;;chr2:119605214..119605230,-!p1@EN1!0.18!0.50!EN1;;chr2:145274805..145274825,-!p35@ZEB2!0.18!0.50!ZEB2;;chr2:145277820..145277831,-!p18@ZEB2!0.18!0.50!ZEB2;;chr2:145277833..145277845,-!p16@ZEB2!0.18!0.50!ZEB2;;chr2:157186607..157186620,-!p13@NR4A2!0.18!0.50!NR4A2;;chr2:172949484..172949522,+!p1@DLX1!0.18!0.50!DLX1;;chr2:172967242..172967265,-!p2@DLX2!0.18!0.50!DLX2;;chr2:176987441..176987454,+!p1@HOXD9!0.18!0.50!HOXD9;;chr2:176995011..176995029,+!p6@HOXD8!0.18!0.50!HOXD8;;chr2:191885737..191885750,-!p4@STAT1!0.18!0.50!STAT1;;chr2:19558327..19558334,-!p2@OSR1!0.18!0.50!OSR1;;chr2:200322723..200322739,-!p6@SATB2!0.18!0.50!SATB2;;chr2:200323212..200323223,-!p8@SATB2!0.18!0.50!SATB2;;chr2:200323304..200323315,-!p12@SATB2!0.18!0.50!SATB2;;chr2:208030614..208030625,-!p9@KLF7!0.18!0.50!KLF7;;chr2:25475094..25475112,-!p3@DNMT3A!0.18!0.50!DNMT3A;;chr2:28635317..28635334,+!p10@FOSL2!0.18!0.50!FOSL2;;chr2:42795598..42795609,+!p9@MTA3!0.18!0.50!MTA3;;chr2:43454125..43454146,-!p2@ZFP36L2!0.18!0.50!ZFP36L2;;chr2:66662797..66662818,+!p10@MEIS1!0.18!0.50!MEIS1;;chr2:74726710..74726736,-!p3@LBX2!0.18!0.50!LBX2;;chr2:8819174..8819185,+!p8@ID2!0.18!0.50!ID2;;chr2:96012353..96012378,+!p4@KCNIP3!0.18!0.50!KCNIP3;;chr2:97203110..97203159,+!p4@ARID5A!0.18!0.50!ARID5A;;chr3:114343870..114343887,-!p9@ZBTB20!0.18!0.50!ZBTB20;;chr3:128205876..128205904,-!p4@GATA2!0.18!0.50!GATA2;;chr3:128207349..128207386,-!p3@GATA2!0.18!0.50!GATA2;;chr3:141150883..141150961,+!p6@ZBTB38!0.18!0.50!ZBTB38;;chr3:25470156..25470227,+!p2@RARB!0.18!0.50!RARB;;chr3:39196049..39196062,-!p5@CSRNP1!0.18!0.50!CSRNP1;;chr3:52001374..52001385,-!p6@PCBP4!0.18!0.50!PCBP4;;chr3:71180051..71180085,-!p21@FOXP1!0.18!0.50!FOXP1;;chr4:103423079..103423112,+!p4@NFKB1!0.18!0.50!NFKB1;;chr4:121843402..121843416,+!p4@PRDM5!0.18!0.50!PRDM5;;chr4:26322673..26322684,+!p11@RBPJ!0.18!0.50!RBPJ;;chr4:26323764..26323821,+!p15@RBPJ!0.18!0.50!RBPJ;;chr4:26323870..26323885,+!p13@RBPJ!0.18!0.50!RBPJ;;chr4:4291780..4291807,-!p4@LYAR!0.18!0.50!LYAR;;chr4:57522598..57522664,-!p3@HOPX!0.18!0.50!HOPX;;chr9:16728161..16728185,-!p4@BNC2!0.18!0.50!BNC2;;chrX:102000987..102001029,+!p3@BHLHB9!0.18!0.50!BHLHB9;;chr9:14083091..14083096,-!p12@NFIB!0.18!0.50!NFIB;;chr9:16705069..16705086,-!p3@BNC2!0.18!0.50!BNC2;;chrX:118739782..118739829,-!p2@NKRF!0.18!0.50!NKRF;;chr9:73028433..73028444,-!p15@KLF9!0.18!0.50!KLF9;;chr9:33295026..33295035,+!p2@NFX1!0.18!0.50!NFX1;;chr9:2158487..2158498,+!p21@SMARCA2!0.18!0.50!SMARCA2;;chr9:2157749..2157764,+!p26@SMARCA2!0.18!0.50!SMARCA2;;chrX:147582130..147582147,+!p3@AFF2!0.18!0.50!AFF2;;chrX:147582254..147582320,+!p1@AFF2!0.18!0.50!AFF2;;chr9:73028447..73028458,-!p13@KLF9!0.18!0.50!KLF9;;chr9:16871214..16871260,-!p11@BNC2!0.18!0.50!BNC2;;chr9:73029044..73029056,-!p10@KLF9!0.18!0.50!KLF9;;chr9:16727880..16727894,-!p10@BNC2!0.18!0.50!BNC2;;chr9:130966497..130966541,-!p4@CIZ1!0.18!0.50!CIZ1;;chrX:57619083..57619113,+!p1@ZXDB!0.18!0.50!ZXDB;;chrX:56259316..56259331,+!p6@KLF8!0.18!0.50!KLF8;;chr5:131825168..131825179,-!p4@IRF1!0.18!0.50!IRF1;;
+|ffid_belonging_in_development=CL:0000134
 |fonse_cell_line=
 |fonse_cell_line_closure=

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FF:11338-117F6: Difference between revisions

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Revision as of 20:40, 9 July 2012

	FAQ
	Mozilla Cavendish skin modified by DaSch for the Web Community Wiki GitHub project page – Report a bug – Skin version: 2.6.0