FF:11346-117G5: Difference between revisions

Revision as of 20:43, 9 July 2012

Name:	Fibroblast - Dermal, donor2
Species:	Human (Homo sapiens)
Library ID:	{{{library_id}}}
Sample type:	{{{sample_category}}}
Genomic View:	UCSC
CAGEd-oPOSSUM:	link

Additional information

Sample information

strain	NA
tissue	skin
dev stage	68 years old adult
sex	female
age	68
cell type	fibroblast
cell line	NA
company	Cell Applications
collaboration	FANTOM5 OSC CORE (contact: Al Forrest)
External link for information	[{{{sample_info_link}}} {{{sample_info_link}}}]

RNA information

lot number	1616
catalog number	CA106-R10a
sample type	total RNA
extraction protocol (Details)	OP-RNA-extraction-totalRNA-TRIzol-isopropanol-v1.0

Download raw sequence, BAM & CTSS

Hg19

BAM	CTSS
[{{{hg19bam}}} download]	[{{{hg19ctss}}} donwload]

Hg38

BAM	CTSS
[{{{hg38bam}}} download]	[{{{hg38ctss}}} donwload]

Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.

Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. Analyst:NA link to dataset. data

Coexpression cluster	score
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral	0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate	0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural	0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial	0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel	0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS	0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils	0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural	0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis	0.21
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy	0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood	0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate	0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma	0.161
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial	0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic	0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat	0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal	0
C113-thyroid-throat-lung-lymph-small-colon-trachea	0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma	0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus	0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea	0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal	0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula	0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD19	0
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils	0
C120-immature-salivary-tongue-skin-cervical-CD14-CD34	0
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B	0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal	0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils	0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte	0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus	0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain	0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil	0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP	0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small	0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD4	0
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar	0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin	0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived	0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma	0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis	0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum	0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal	0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic	0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal	0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal	0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen	0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen	0.516
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B	0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair	0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast	0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis	0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal	0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell	0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral	0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal	0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum	0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue	0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small	0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast	0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung	0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular	0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate	0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid	0
C156-plasma-splenic-hereditary-B-large-xeroderma-b	0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea	0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen	0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal	0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain	0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral	0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta	0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon	0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal	0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma	0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial	0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung	0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD4	0
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral	0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma	0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage	0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet	0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye	0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes	0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose	0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils	0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural	-0.0238
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19	-0.321
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous	0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus	0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil	0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood	0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle	-0.247
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar	0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute	0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt	0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid	0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis	0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid	0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage	0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat	0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen	0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma	0
C190-colon-small-rectum-duodenum-appendix-temporal-oral	0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic	0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD4	0
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD14	0
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar	0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal	0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial	0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival	0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes	0.196
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma	0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast	0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat	0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed	0.116
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall	0
C202-salivary-skin-penis-tongue-uterus-cervical-immature	0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic	0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD34	0
C205-mycosis-cord-hairy-xeroderma-CD4-B-b	0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary	0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte	0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous	0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen	0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic	0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil	0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney	0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD34	0
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral	0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain	0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature	0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD34	0
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital	0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary	0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum	0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD19	0
C220-Adipocyte-mature-left-breast-skin-liver-adipose	0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular	0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte	0.0392
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte	0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal	0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal	0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal	0.196
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue	0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult	0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart	0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD14	0
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung	0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis	0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum	0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF7	0
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma	0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas	0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma	0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial	0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell	0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy	0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral	0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal	0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus	0.505
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach	0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing	0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage	0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic	0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory	0
C247-pons-locus-medulla-spinal-paracentral-medial-occipital	0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast	0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial	0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall	0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD4	0
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue	0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma	0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum	0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris	0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast	0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla	0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral	0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric	0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing	0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole	0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood	0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal	0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms	0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil	0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute	0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD8	-0.0292
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast	0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear	0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate	0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD4	0
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung	0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth	0
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum	0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil	0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast	0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte	0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal	0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal	0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma	0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory	0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial	0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic	0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD4	0
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small	0.354
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat	0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular	0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus	0
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic	0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial	0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal	0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal	0
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left	0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart	0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature	0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea	0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal	0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD34	0
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral	0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte	0
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed	0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral	0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital	0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood	0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala	0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal	0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils	0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic	0.433
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid	0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole	0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus	0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea	0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory	0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen	0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile	0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula	0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt	0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea	0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms	0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD133	0
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus	0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small	0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal	0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon	0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder	0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature	0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS	0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel	0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix	0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus	0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma	0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas	0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma	0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas	0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma	0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary	0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature	0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma	0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue	0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural	0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H9	0
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic	0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature	0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical	0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b	0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph	0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute	0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic	0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils	0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus	0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung	0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma	0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK	0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast	0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue	0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate	0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left	0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal	0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy	0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral	0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell	0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD8	0
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea	0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal	0.254
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD34	0
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast	0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid	0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD34	0
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic	0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon	0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma	0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma	0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic	0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived	0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic	0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left	0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen	0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair	0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole	0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular	0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma	0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid	0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix	0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain	0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole	0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid	0

Repeat families with enriched expression in this sampleSummary:Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed. Analyst:NA link to dataset. data no result for this sample

TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifsSummary:Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression Analyst: Michiel de Hoon link to dataset. data

library id: CNhs11379

Jaspar motif	Logo	P-value
MA0002.2	MA0002.2	0.323
MA0003.1	MA0003.1	0.429
MA0004.1	MA0004.1	0.195
MA0006.1	MA0006.1	0.786
MA0007.1	MA0007.1	0.00167
MA0009.1	MA0009.1	0.749
MA0014.1	MA0014.1	0.499
MA0017.1	MA0017.1	0.345
MA0018.2	MA0018.2	3.3869e-4
MA0019.1	MA0019.1	0.796
MA0024.1	MA0024.1	0.189
MA0025.1	MA0025.1	0.165
MA0027.1	MA0027.1	0.538
MA0028.1	MA0028.1	0.272
MA0029.1	MA0029.1	0.525
MA0030.1	MA0030.1	0.177
MA0031.1	MA0031.1	0.515
MA0035.2	MA0035.2	0.299
MA0038.1	MA0038.1	0.107
MA0039.2	MA0039.2	0.133
MA0040.1	MA0040.1	0.69
MA0041.1	MA0041.1	0.508
MA0042.1	MA0042.1	0.914
MA0043.1	MA0043.1	1.50085e-4
MA0046.1	MA0046.1	0.981
MA0047.2	MA0047.2	0.168
MA0048.1	MA0048.1	0.245
MA0050.1	MA0050.1	1.50734e-6
MA0051.1	MA0051.1	0.0425
MA0052.1	MA0052.1	0.153
MA0055.1	MA0055.1	0.00202
MA0057.1	MA0057.1	0.0551
MA0058.1	MA0058.1	0.224
MA0059.1	MA0059.1	0.00345
MA0060.1	MA0060.1	0.0112
MA0061.1	MA0061.1	0.567
MA0062.2	MA0062.2	0.754
MA0065.2	MA0065.2	0.315
MA0066.1	MA0066.1	0.161
MA0067.1	MA0067.1	0.0202
MA0068.1	MA0068.1	0.33
MA0069.1	MA0069.1	0.217
MA0070.1	MA0070.1	0.247
MA0071.1	MA0071.1	0.476
MA0072.1	MA0072.1	0.428
MA0073.1	MA0073.1	0.998
MA0074.1	MA0074.1	0.657
MA0076.1	MA0076.1	0.958
MA0077.1	MA0077.1	0.674
MA0078.1	MA0078.1	0.966
MA0079.2	MA0079.2	0.536
MA0080.2	MA0080.2	0.304
MA0081.1	MA0081.1	0.376
MA0083.1	MA0083.1	0.0801
MA0084.1	MA0084.1	0.769
MA0087.1	MA0087.1	0.624
MA0088.1	MA0088.1	0.01
MA0090.1	MA0090.1	0.0818
MA0091.1	MA0091.1	0.229
MA0092.1	MA0092.1	0.361
MA0093.1	MA0093.1	0.264
MA0099.2	MA0099.2	1.71152e-17
MA0100.1	MA0100.1	0.902
MA0101.1	MA0101.1	0.49
MA0102.2	MA0102.2	0.0305
MA0103.1	MA0103.1	0.18
MA0104.2	MA0104.2	0.0903
MA0105.1	MA0105.1	0.367
MA0106.1	MA0106.1	0.00524
MA0107.1	MA0107.1	0.172
MA0108.2	MA0108.2	5.48841e-5
MA0111.1	MA0111.1	0.533
MA0112.2	MA0112.2	0.0135
MA0113.1	MA0113.1	0.00297
MA0114.1	MA0114.1	0.229
MA0115.1	MA0115.1	0.712
MA0116.1	MA0116.1	0.284
MA0117.1	MA0117.1	0.292
MA0119.1	MA0119.1	0.00951
MA0122.1	MA0122.1	0.899
MA0124.1	MA0124.1	0.164
MA0125.1	MA0125.1	0.654
MA0131.1	MA0131.1	0.887
MA0135.1	MA0135.1	0.326
MA0136.1	MA0136.1	0.234
MA0137.2	MA0137.2	0.0723
MA0138.2	MA0138.2	0.979
MA0139.1	MA0139.1	0.488
MA0140.1	MA0140.1	0.0838
MA0141.1	MA0141.1	0.0264
MA0142.1	MA0142.1	0.209
MA0143.1	MA0143.1	0.151
MA0144.1	MA0144.1	0.553
MA0145.1	MA0145.1	0.183
MA0146.1	MA0146.1	0.452
MA0147.1	MA0147.1	0.0181
MA0148.1	MA0148.1	0.51
MA0149.1	MA0149.1	0.00746
MA0150.1	MA0150.1	0.00756
MA0152.1	MA0152.1	0.575
MA0153.1	MA0153.1	0.773
MA0154.1	MA0154.1	0.437
MA0155.1	MA0155.1	0.264
MA0156.1	MA0156.1	0.301
MA0157.1	MA0157.1	0.98
MA0159.1	MA0159.1	0.319
MA0160.1	MA0160.1	0.205
MA0162.1	MA0162.1	0.101
MA0163.1	MA0163.1	0.0275
MA0164.1	MA0164.1	0.713
MA0258.1	MA0258.1	0.327
MA0259.1	MA0259.1	0.0724

FANTOM5 phase1 novel unique motifsSummary:Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above Analyst: Michiel de Hoon link to dataset. data

library id: CNhs11379

Novel motif	Logo	P-value
1	1	0.122
10	10	0.453
100	100	0.369
101	101	0.646
102	102	0.272
103	103	0.966
104	104	0.315
105	105	0.224
106	106	0.656
107	107	0.298
108	108	0.36
109	109	0.00222
11	11	0.0457
110	110	0.0165
111	111	0.604
112	112	0.882
113	113	0.343
114	114	0.133
115	115	0.725
116	116	0.55
117	117	0.525
118	118	0.885
119	119	0.352
12	12	0.78
120	120	0.103
121	121	0.308
122	122	0.483
123	123	0.0973
124	124	0.649
125	125	0.574
126	126	0.898
127	127	0.177
128	128	0.382
129	129	0.86
13	13	0.104
130	130	0.0711
131	131	0.755
132	132	0.903
133	133	0.188
134	134	0.425
135	135	0.671
136	136	0.308
137	137	0.178
138	138	0.762
139	139	0.943
14	14	0.402
140	140	0.508
141	141	0.715
142	142	0.89
143	143	0.0418
144	144	0.517
145	145	0.0277
146	146	0.0337
147	147	0.0835
148	148	0.507
149	149	0.179
15	15	0.322
150	150	0.279
151	151	0.658
152	152	0.158
153	153	0.479
154	154	0.559
155	155	0.126
156	156	0.369
157	157	0.43
158	158	0.204
159	159	0.488
16	16	0.799
160	160	0.00282
161	161	0.777
162	162	0.961
163	163	0.985
164	164	0.827
165	165	0.646
166	166	0.736
167	167	0.431
168	168	0.472
169	169	0.0518
17	17	0.191
18	18	0.0744
19	19	0.114
2	2	0.78
20	20	0.905
21	21	0.444
22	22	0.21
23	23	0.479
24	24	0.134
25	25	0.66
26	26	0.0888
27	27	0.288
28	28	0.133
29	29	0.682
3	3	0.485
30	30	0.611
31	31	0.882
32	32	0.817
33	33	0.0186
34	34	0.375
35	35	0.813
36	36	0.143
37	37	0.193
38	38	0.42
39	39	0.554
4	4	0.636
40	40	0.0469
41	41	0.586
42	42	0.355
43	43	0.232
44	44	0.407
45	45	0.688
46	46	0.0965
47	47	0.217
48	48	0.0493
49	49	0.273
5	5	0.758
50	50	0.329
51	51	0.647
52	52	0.646
53	53	0.784
54	54	0.721
55	55	0.836
56	56	0.503
57	57	0.0382
58	58	0.958
59	59	0.604
6	6	0.664
60	60	0.872
61	61	0.781
62	62	0.613
63	63	0.112
64	64	0.315
65	65	0.29
66	66	0.0156
67	67	0.735
68	68	0.0919
69	69	0.182
7	7	0.541
70	70	0.402
71	71	0.0177
72	72	0.97
73	73	0.0134
74	74	0.722
75	75	0.28
76	76	0.928
77	77	0.122
78	78	0.991
79	79	0.356
8	8	0.00344
80	80	0.579
81	81	0.611
82	82	0.74
83	83	0.551
84	84	0.0856
85	85	0.584
86	86	0.629
87	87	0.0439
88	88	0.197
89	89	0.0963
9	9	0.14
90	90	0.0715
91	91	0.731
92	92	0.799
93	93	0.328
94	94	0.525
95	95	0.0265
96	96	0.219
97	97	0.302
98	98	0.0329
99	99	9.36232e-4

de novo motifs identified by HOMER in promoters active in this sampleSummary:The result of HOMER in this sample is shown. Analyst:NA library id: CNhs11379

FANTOM5 (FF) ontology

Direct parent terms

is_a relathionship
EFO:0002091 biological replicate
FF:0000062 human dermal fibroblast sample

Ancestor terms (non development)Summary:Connected ontology terms with is_a, part_of or located_in relationship Analyst: Hideya Kawaji link to source data data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000548 (animal cell)
0002320 (connective tissue cell)
0002371 (somatic cell)
0000255 (eukaryotic cell)
0000057 (fibroblast)
0002620 (skin fibroblast)
0002551 (fibroblast of dermis)

UBERON: Anatomy
0000468 (multi-cellular organism)
0002097 (skin of body)
0002199 (integument)
0002384 (connective tissue)
0000479 (tissue)
0000064 (organ part)
0010314 (structure with developmental contribution from neural crest)
0000062 (organ)
0004120 (mesoderm-derived structure)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0004923 (organ component layer)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0003102 (surface structure)
0010317 (germ layer / neural crest derived structure)
0002067 (dermis)
0002416 (integumental system)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000057 (fibroblast sample)
0000250 (human fibroblast of skin sample)
0000001 (sample)
0000062 (human dermal fibroblast sample)

Ancestor terms (development)Summary:Connected ontology terms with develops_from, derives_from or preceded_by relationship Analyst: Hideya Kawaji link to source data data
CL:0000134 (mesenchymal cell)

@@ Line 10: / Line 10: @@
 |def=
 |expression_enrichment_score=chr6:34204921..34204939,+!p3@HMGA1!1.88!2122.16!HMGA1;;chr2:239756671..239756732,+!p1@TWIST2!1.53!103.26!TWIST2;;chr2:239756739..239756755,+!p2@TWIST2!1.50!51.34!TWIST2;;chrX:2418949..2419024,-!p1@DHRSX,p1@ZBED1!1.42!25.10!ZBED1;;chr1:170633348..170633399,+!p2@PRRX1!1.39!31.95!PRRX1;;chr2:19558373..19558392,-!p1@OSR1!1.38!62.18!OSR1;;chr1:170632285..170632309,+!p1@PRRX1!1.38!25.67!PRRX1;;chr20:62680984..62680999,-!p1@SOX18!1.36!28.52!SOX18;;chr8:25902876..25902936,-!p1@EBF2!1.32!19.97!EBF2;;chr7:19157248..19157268,-!p1@TWIST1!1.26!47.35!TWIST1;;chr11:65686802..65686818,+!p6@DRAP1!1.25!29.09!DRAP1;;chr21:39870339..39870443,-!p1@ERG!1.21!15.40!ERG;;chr8:55370487..55370503,+!p1@SOX17!1.17!13.69!SOX17;;chr18:53068911..53068935,-!p4@TCF4!1.15!14.83!TCF4;;chr1:170633262..170633285,+!p3@PRRX1!1.13!14.26!PRRX1;;chr19:46801639..46801699,+!p1@HIF3A!1.13!12.55!HIF3A;;chr15:57511609..57511651,+!p2@TCF12!1.12!20.54!TCF12;;chr2:102091566..102091581,-!p1@RFX8!1.11!11.98!RFX8;;chr11:65667884..65667895,-!p2@FOSL1!1.09!43.93!FOSL1;;chr20:55204351..55204377,+!p1@TFAP2C!1.07!13.69!TFAP2C;;chr17:59477233..59477263,+!p1@TBX2!1.06!33.09!TBX2;;chr11:65687362..65687436,+!p3@DRAP1!1.05!46.78!DRAP1;;chr12:66218255..66218304,+!p3@HMGA2!1.05!27.95!HMGA2;;chr17:6926362..6926377,+!p1@BCL6B!1.05!10.27!BCL6B;;chr11:65667846..65667868,-!p1@FOSL1!1.04!266.41!FOSL1;;chr11:65686732..65686756,+!p2@DRAP1!1.03!41.64!DRAP1;;chr3:141105705..141105770,+!p4@ZBTB38!1.01!11.41!ZBTB38;;chr6:34204973..34204990,+!p4@HMGA1!0.98!116.38!HMGA1;;chr8:128748308..128748324,+!p2@MYC!0.97!235.03!MYC;;chr16:86600426..86600441,+!p1@FOXC2!0.97!21.11!FOXC2;;chr9:132427972..132428056,+!p1@PRRX2!0.96!10.84!PRRX2;;chr1:170632439..170632465,+!p11@PRRX1!0.93!7.42!PRRX1;;chr1:6479968..6479986,-!p1@HES2!0.93!7.42!HES2;;chr15:83953397..83953425,-!p1@BNC1!0.90!7.99!BNC1;;chr17:41622925..41622976,-!p3@ETV4!0.89!10.27!ETV4;;chr1:170632477..170632506,+!p6@PRRX1!0.89!6.85!PRRX1;;chr8:10588010..10588030,-!p1@SOX7!0.89!6.85!SOX7;;chr12:96588368..96588394,+!p3@ELK3!0.88!18.26!ELK3;;chr11:47279504..47279563,+!p1@NR1H3!0.88!15.40!NR1H3;;chr17:41622765..41622821,-!p2@ETV4!0.88!10.27!ETV4;;chr3:141121847..141121868,+!p5@ZBTB38!0.88!10.27!ZBTB38;;chr3:12330560..12330579,+!p1@PPARG!0.87!7.42!PPARG;;chr5:2751762..2751784,-!p1@IRX2!0.86!6.28!IRX2;;chr8:93074803..93074845,-!p1@RUNX1T1!0.86!6.28!RUNX1T1;;chr12:53614115..53614154,-!p1@RARG!0.85!34.23!RARG;;chr12:66218836..66218888,+!p1@HMGA2!0.84!58.76!HMGA2;;chr6:134210243..134210257,+!p1@TCF21!0.83!5.70!TCF21;;chr9:132427883..132427951,+!p2@PRRX2!0.83!5.70!PRRX2;;chr11:65687222..65687240,+!p7@DRAP1!0.82!7.42!DRAP1;;chr6:34204672..34204692,+!p1@HMGA1!0.80!656.61!HMGA1;;chr11:65686952..65686975,+!p5@DRAP1!0.79!30.81!DRAP1;;chr19:13213511..13213545,-!p2@LYL1!0.79!5.70!LYL1;;chr1:170632959..170632987,+!p4@PRRX1!0.79!5.70!PRRX1;;chr7:35293685..35293718,-!p1@TBX20!0.79!5.13!TBX20;;chr4:81118647..81118666,+!p1@PRDM8!0.78!6.85!PRDM8;;chr12:66218598..66218645,+!p2@HMGA2!0.76!23.96!HMGA2;;chr20:42543441..42543497,+!p1@TOX2!0.76!23.39!TOX2;;chr17:59477275..59477286,+!p3@TBX2!0.75!6.28!TBX2;;chr17:7493405..7493419,-!p1@SOX15!0.75!4.56!SOX15;;chr8:93074848..93074871,-!p3@RUNX1T1!0.75!4.56!RUNX1T1;;chr1:170632250..170632277,+!p7@PRRX1!0.75!4.56!PRRX1;;chr1:170632723..170632739,+!p8@PRRX1!0.75!4.56!PRRX1;;chr3:12329358..12329393,+!p3@PPARG!0.74!11.98!PPARG;;chr8:128747661..128747703,+!p6@MYC!0.74!6.28!MYC;;chr11:65687243..65687276,+!p8@DRAP1!0.74!6.28!DRAP1;;chr11:65686776..65686787,+!p9@DRAP1!0.72!5.13!DRAP1;;chr1:54204818..54204870,-!p@chr1:54204818..54204870,-!0.72!4.56!GLIS1;;chr3:12329397..12329433,+!p2@PPARG!0.71!10.27!PPARG;;chr15:42749722..42749739,-!p2@ZFP106!0.71!7.99!ZFP106;;chr11:46299199..46299233,+!p1@CREB3L1!0.70!23.39!CREB3L1;;chr1:170632137..170632172,+!p10@PRRX1!0.70!3.99!PRRX1;;chr12:66218378..66218401,+!p6@HMGA2!0.68!6.28!HMGA2;;chr6:85473156..85473210,-!p2@TBX18!0.66!4.56!TBX18;;chr7:44143925..44143970,+!p1@AEBP1!0.65!91.85!AEBP1;;chr16:4322832..4322907,-!p1@TFAP4!0.65!30.24!TFAP4;;chr11:47279248..47279264,+!p3@NR1H3!0.65!3.99!NR1H3;;chr5:2751785..2751808,-!p2@IRX2!0.65!3.42!IRX2;;chr2:102091144..102091183,-!p2@RFX8!0.65!3.42!RFX8;;chr2:223163706..223163730,-!p1@PAX3!0.65!3.42!PAX3;;chr16:86600870..86600921,+!p2@FOXC2!0.65!3.42!FOXC2;;chr1:170633058..170633084,+!p5@PRRX1!0.65!3.42!PRRX1;;chr1:170633100..170633112,+!p19@PRRX1!0.65!3.42!PRRX1;;chr20:39946361..39946379,-!p2@ZHX3!0.64!11.41!ZHX3;;chr12:7079780..7079791,-!p2@PHB2!0.63!19.97!PHB2;;chr5:321810..321877,+!p1@AHRR!0.63!11.98!AHRR;;chr12:66218183..66218209,+!p4@HMGA2!0.63!6.85!HMGA2;;chr17:41623009..41623053,-!p4@ETV4!0.63!5.70!ETV4;;chr12:66218212..66218244,+!p5@HMGA2!0.63!5.13!HMGA2;;chr2:200322654..200322707,-!p2@SATB2!0.63!5.13!SATB2;;chr20:42543506..42543549,+!p2@TOX2!0.62!8.56!TOX2;;chr8:128747757..128747800,+!p7@MYC!0.62!4.56!MYC;;chr15:96869114..96869160,+!p11@NR2F2!0.62!4.56!NR2F2;;chr1:8938766..8938774,-!p2@ENO1!0.61!255.57!ENO1;;chr14:61116183..61116208,-!p1@SIX1!0.61!13.69!SIX1;;chr11:46299539..46299620,+!p2@CREB3L1!0.61!5.70!CREB3L1;;chr11:65687158..65687216,+!p4@DRAP1!0.60!20.54!DRAP1;;chr1:209979467..209979494,-!p1@IRF6!0.60!3.42!IRF6;;chr17:41623692..41623715,-!p1@ETV4!0.59!14.83!ETV4;;chr19:3366625..3366629,+!p4@NFIC!0.59!4.56!NFIC;;chr16:54320127..54320148,-!p6@IRX3!0.59!2.85!IRX3;;chr17:41622731..41622764,-!p5@ETV4!0.59!2.85!ETV4;;chr17:45810594..45810608,+!p1@TBX21!0.59!2.85!TBX21;;chr1:170632028..170632043,+!p20@PRRX1!0.59!2.85!PRRX1;;chr1:170632683..170632696,+!p12@PRRX1!0.59!2.85!PRRX1;;chr1:170633245..170633256,+!p14@PRRX1!0.59!2.85!PRRX1;;chr20:55205825..55205847,+!p2@TFAP2C!0.59!2.85!TFAP2C;;chr2:96012397..96012417,+!p3@KCNIP3!0.59!2.85!KCNIP3;;chr3:138665969..138665993,-!p2@FOXL2!0.59!2.85!FOXL2;;chr3:141121820..141121838,+!p9@ZBTB38!0.59!2.85!ZBTB38;;chr3:21792682..21792720,-!p1@ZNF385D!0.59!2.85!ZNF385D;;chr4:174450089..174450153,-!p2@HAND2!0.59!2.85!HAND2;;chr4:174451370..174451387,-!p1@HAND2!0.59!2.85!HAND2;;chr10:119302645..119302712,+!p3@EMX2!0.59!2.85!EMX2;;chr12:66218420..66218439,+!p12@HMGA2!0.59!2.85!HMGA2;;chr1:8938709..8938720,-!p3@ENO1!0.58!166.58!ENO1;;chr12:115121962..115121987,-!p1@TBX3!0.57!27.95!TBX3;;chr6:34205372..34205412,+!p5@HMGA1!0.57!16.54!HMGA1;;chr12:115122005..115122016,-!p3@TBX3!0.57!3.42!TBX3;;chr7:14029283..14029311,-!p1@ETV1!0.56!17.11!ETV1;;chr19:42636586..42636607,-!p1@POU2F2!0.56!8.56!POU2F2;;chr17:59477197..59477212,+!p2@TBX2!0.56!5.13!TBX2;;chr3:157823517..157823562,-!p1@SHOX2!0.56!2.85!SHOX2;;chr17:7492684..7492778,-!p2@SOX15!0.55!6.28!SOX15;;chr19:13134457..13134462,+!p5@NFIX!0.55!5.13!NFIX;;chr19:50431973..50431998,+!p5@ATF5!0.55!3.42!ATF5;;chr1:8938736..8938756,-!p1@ENO1!0.54!3457.63!ENO1;;chr1:158979792..158979814,+!p2@IFI16!0.54!29.66!IFI16;;chr8:49833948..49833973,-!p2@SNAI2!0.54!19.40!SNAI2;;chr20:42295713..42295738,+!p2@MYBL2!0.54!18.26!MYBL2;;chr5:72744445..72744466,-!p2@FOXD1!0.54!4.56!FOXD1;;chr8:72756267..72756296,-!p4@MSC!0.54!3.99!MSC;;chr5:133450365..133450444,+!p1@TCF7!0.53!13.69!TCF7;;chr12:2986275..2986363,-!p1@FOXM1!0.52!29.66!FOXM1;;chr5:72744594..72744609,-!p1@FOXD1!0.52!13.12!FOXD1;;chr1:212873267..212873332,-!p1@BATF3!0.52!3.42!BATF3;;chr1:158985469..158985489,+!p7@IFI16!0.52!2.85!IFI16;;chr15:96869222..96869251,+!p18@NR2F2!0.52!2.85!NR2F2;;chr11:65430535..65430549,-!p4@RELA!0.52!2.85!RELA;;chr3:169381420..169381535,-!p1@MECOM!0.52!2.85!MECOM;;chr2:102091478..102091490,-!p3@RFX8!0.52!2.28!RFX8;;chr2:119604456..119604501,-!p2@EN1!0.52!2.28!EN1;;chr2:19558327..19558334,-!p2@OSR1!0.52!2.28!OSR1;;chr2:237077022..237077038,-!p1@GBX2!0.52!2.28!GBX2;;chr1:170632115..170632136,+!p9@PRRX1!0.52!2.28!PRRX1;;chr6:34210478..34210481,+!p8@HMGA1!0.52!2.28!HMGA1;;chr12:66218923..66218934,+!p14@HMGA2!0.52!2.28!HMGA2;;chr19:13135386..13135435,+!p4@NFIX!0.52!2.28!NFIX;;chr19:13136057..13136085,+!p11@NFIX!0.52!2.28!NFIX;;chr2:200323414..200323455,-!p1@SATB2!0.51!5.70!SATB2;;chr20:42295745..42295765,+!p1@MYBL2!0.50!46.21!MYBL2;;chr7:44143978..44143989,+!p2@AEBP1!0.50!4.56!AEBP1;;chr6:1312325..1312340,+!p1@FOXQ1!0.50!3.99!FOXQ1;;chr19:38720294..38720348,-!p1@DPF1!0.50!2.85!DPF1;;chr17:47492252..47492265,-!p2@PHB!0.49!10.84!PHB;;chr2:66662281..66662308,+!p1@MEIS1!0.49!9.13!MEIS1;;chr8:145159324..145159333,+!p5@MAF1!0.49!5.13!MAF1;;chr17:41623667..41623682,-!p8@ETV4!0.49!2.28!ETV4;;chr12:124873357..124873401,-!p1@NCOR2!0.48!31.38!NCOR2;;chr1:221052700..221052730,+!p5@HLX!0.48!3.42!HLX;;chr4:4861385..4861398,+!p1@MSX1!0.47!7.42!MSX1;;chr11:65430554..65430579,-!p3@RELA!0.47!6.28!RELA;;chr12:10875351..10875422,-!p4@CSDA!0.47!4.56!CSDA;;chrX:66763815..66763854,+!p2@AR!0.47!2.85!AR;;chr19:45579762..45579772,-!p2@ZNF296!0.47!2.28!ZNF296;;chr17:46622440..46622477,-!p5@HOXB2!0.47!2.28!HOXB2;;chr15:96874244..96874259,+!p5@NR2F2!0.46!5.70!NR2F2;;chr2:242576431..242576458,-!p3@THAP4!0.46!5.70!THAP4;;chr15:90544532..90544563,+!p1@ZNF710!0.46!4.56!ZNF710;;chr1:43148625..43148710,+!p3@YBX1!0.46!3.99!YBX1;;chr8:49833978..49833996,-!p1@SNAI2!0.45!53.05!SNAI2;;chr17:41623075..41623101,-!p9@ETV4!0.45!2.28!ETV4;;chr19:6424813..6424835,-!p1@KHSRP!0.44!156.31!KHSRP;;chr19:19516543..19516559,+!p6@GATAD2A!0.44!7.42!GATAD2A;;chr11:113930291..113930339,+!p2@ZBTB16!0.44!3.42!ZBTB16;;chr5:174151553..174151610,+!p1@MSX2!0.44!3.42!MSX2;;chr6:10412600..10412637,-!p1@TFAP2A!0.44!3.42!TFAP2A;;chr17:3571887..3571918,-!p2@TAX1BP3!0.43!26.81!TAX1BP3;;chr8:10697329..10697365,-!p2@PINX1,p2@SOX7!0.43!15.40!SOX7;;chr7:150946015..150946070,-!p3@SMARCD3!0.43!4.56!SMARCD3;;chr15:96874145..96874166,+!p7@NR2F2!0.43!3.99!NR2F2;;chr16:86544113..86544145,+!p1@FOXF1!0.43!2.28!FOXF1;;chr6:10415276..10415341,-!p2@TFAP2A!0.43!2.28!TFAP2A;;chr1:43148716..43148756,+!p6@YBX1!0.43!2.28!YBX1;;chr19:46800289..46800327,+!p2@HIF3A!0.43!1.71!HIF3A;;chr19:50542543..50542548,+!p2@ZNF473!0.43!1.71!ZNF473;;chr1:170632867..170632878,+!p21@PRRX1!0.43!1.71!PRRX1;;chr1:170633225..170633230,+!p25@PRRX1!0.43!1.71!PRRX1;;chr1:200008734..200008765,+!p2@NR5A2!0.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MTA2!0.18!2.28!MTA2;;chr17:38256973..38256990,-!p5@NR1D1!0.18!2.28!NR1D1;;chr4:146402925..146402957,+!p4@SMAD1!0.18!2.28!SMAD1;;chr2:46524506..46524514,+!p5@EPAS1!0.18!1.71!EPAS1;;chr3:185826814..185826825,-!p3@ETV5!0.18!1.71!ETV5;;chr2:174830540..174830563,-!p8@SP3!0.18!1.14!SP3;;chr3:25469724..25469773,+!p1@RARB!0.18!1.14!RARB;;chr1:61547811..61547837,+!p7@NFIA!0.18!1.14!NFIA;;chr20:48807648..48807671,+!p9@CEBPB!0.18!1.14!CEBPB;;chr8:128752771..128752843,+!p9@MYC!0.18!1.14!MYC;;chr8:80679993..80680011,-!p1@HEY1!0.18!1.14!HEY1;;chrX:66763856..66763896,+!p1@AR!0.18!1.14!AR;;chr15:66994615..66994630,+!p3@SMAD6!0.18!1.14!SMAD6;;chr15:96869292..96869320,+!p15@NR2F2!0.18!1.14!NR2F2;;chr15:96876966..96877017,+!p12@NR2F2!0.18!1.14!NR2F2;;chr16:54320158..54320200,-!p5@IRX3!0.18!1.14!IRX3;;chr16:54964740..54964789,+!p1@IRX5!0.18!1.14!IRX5;;chr16:67063142..67063153,+!p4@CBFB!0.18!1.14!CBFB;;chr11:113930425..113930471,+!p1@ZBTB16!0.18!1.14!ZBTB16;;chr12:80085255..80085284,-!p9@PAWR!0.18!1.14!PAWR;;chr12:7079807..7079848,-!p1@PHB2!0.17!241.88!PHB2;;chr12:53835508..53835533,+!p1@PRR13,p2@PCBP2!0.17!100.97!PCBP2;;chr9:130953817..130953876,-!p1@CIZ1!0.17!80.44!CIZ1;;chr13:114238997..114239077,+!p1@TFDP1!0.17!66.75!TFDP1;;chr18:3450161..3450183,+!p1@TGIF1!0.17!45.07!TGIF1;;chr17:38474489..38474548,+!p1@RARA!0.17!42.21!RARA;;chr19:11071685..11071798,+!p1@SMARCA4!0.17!37.08!SMARCA4;;chr11:47236489..47236567,+!p2@DDB2!0.17!17.68!DDB2;;chr11:62369108..62369183,-!p3@MTA2!0.17!16.54!MTA2;;chr22:30162924..30163005,-!p1@ZMAT5!0.17!15.97!ZMAT5;;chr19:42580274..42580375,+!p1@ZNF574!0.17!14.83!ZNF574;;chr1:246729483..246729538,-!p2@TFB2M!0.17!11.98!TFB2M;;chr19:4065485..4065546,-!p2@ZBTB7A!0.17!11.41!ZBTB7A;;chr19:49865646..49865718,-!p1@TEAD2!0.17!10.84!TEAD2;;chr15:50647274..50647336,-!p1@GABPB1!0.17!8.56!GABPB1;;chr12:54772960..54773015,-!p3@ZNF385A!0.17!5.70!ZNF385A;;chr19:6280025..6280040,-!p2@MLLT1!0.17!3.99!MLLT1;;chr1:8484142..8484232,-!p10@RERE!0.17!2.85!RERE;;chr1:8763463..8763499,-!p6@RERE!0.17!2.85!RERE;;chr17:46621937..46621966,-!p2@HOXB2!0.17!2.85!HOXB2;;chr19:12721790..12721810,+!p2@ZNF791!0.17!2.85!ZNF791;;chr22:41697497..41697515,+!p2@ZC3H7B!0.17!2.85!ZC3H7B;;chr3:48282536..48282586,+!p2@ZNF589!0.17!2.85!ZNF589;;chr20:25677443..25677464,-!p2@ZNF337!0.17!2.28!ZNF337;;chr1:25256756..25256774,-!p1@RUNX3!0.17!1.71!RUNX3;;chr6:31869828..31869880,-!p1@ZBTB12!0.17!1.71!ZBTB12;;chr16:31724618..31724630,+!p2@ZNF720!0.17!1.71!ZNF720;;chr16:89787973..89788001,+!p3@ZNF276!0.17!1.71!ZNF276;;chr12:122516678..122516687,+!p3@MLXIP!0.17!1.71!MLXIP;;chr14:21566882..21566898,-!p3@ZNF219!0.17!1.14!ZNF219;;chr6:43139248..43139261,+!p4@SRF!0.17!1.14!SRF;;chr19:44037334..44037365,+!p2@ZNF575!0.17!1.14!ZNF575;;chr19:58666399..58666438,-!p3@ZNF329!0.17!1.14!ZNF329;;chr1:247171316..247171336,-!p3@ZNF695!0.17!1.14!ZNF695;;chr10:44144219..44144230,-!p5@ZNF32!0.17!0.57!ZNF32;;chr12:57853565..57853579,+!p1@GLI1!0.17!0.57!GLI1;;chr12:66218152..66218174,+!p10@HMGA2!0.17!0.57!HMGA2;;chr19:19302931..19302974,-!p1@MEF2BNB-MEF2B,p1@MEF2BNB,p1@MEF2B!0.16!31.95!MEF2B;;chr19:1863591..1863611,-!p2@KLF16!0.16!11.98!KLF16;;chr16:30418910..30418961,+!p1@ZNF771!0.16!9.13!ZNF771;;chr19:57106647..57106686,+!p1@ZNF71!0.16!7.99!ZNF71;;chr3:128206762..128206781,-!p2@GATA2!0.16!7.42!GATA2;;chr11:62368696..62368759,-!p4@MTA2!0.16!7.42!MTA2;;chr3:40518599..40518664,+!p1@ZNF619!0.16!6.85!ZNF619;;chr5:92918919..92918942,+!p1@NR2F1!0.16!5.13!NR2F1;;chr8:57123815..57123867,-!p1@PLAG1!0.16!4.56!PLAG1;;chr7:102985288..102985310,-!p2@DNAJC2!0.16!2.28!DNAJC2;;chr7:99102267..99102304,+!p2@ZKSCAN5!0.16!2.28!ZKSCAN5;;chr8:145159447..145159458,+!p4@MAF1!0.16!2.28!MAF1;;chr2:46524474..46524491,+!p4@EPAS1!0.16!2.28!EPAS1;;chr19:52408285..52408310,-!p3@ZNF649!0.16!2.28!ZNF649;;chr20:25677399..25677433,-!p3@ZNF337!0.16!1.71!ZNF337;;chr20:50808667..50808729,-!p3@ZFP64!0.16!1.71!ZFP64;;chr17:61920116..61920131,-!p5@SMARCD2!0.16!1.71!SMARCD2;;chr18:51750414..51750449,-!p5@MBD2!0.16!1.71!MBD2;;chr5:43065197..43065244,+!p5@ZNF131!0.16!1.71!ZNF131;;chr15:57025812..57025819,-!p4@ZNF280D!0.16!1.14!ZNF280D;;chr4:57774884..57774924,+!p4@REST!0.16!1.14!REST;;chr1:35657082..35657099,-!p8@SFPQ!0.16!1.14!SFPQ;;chr12:10875768..10875808,-!p3@CSDA!0.16!1.14!CSDA;;chr12:3068196..3068232,+!p9@TEAD4!0.16!0.57!TEAD4;;chr2:25565377..25565389,-!p9@DNMT3A!0.16!0.57!DNMT3A;;chr5:92918860..92918871,+!p10@NR2F1!0.16!0.57!NR2F1;;chr7:100076744..100076749,-!p8@TSC22D4!0.16!0.57!TSC22D4;;chr8:80680078..80680101,-!p3@HEY1!0.16!0.57!HEY1;;chr15:77197781..77197801,-!p3@SCAPER!0.16!0.57!SCAPER;;chr17:42295955..42295964,-!p22@UBTF!0.16!0.57!UBTF;;chr19:39390697..39390713,+!p4@NFKBIB!0.16!0.57!NFKBIB;;chr19:52772811..52772817,+!p3@ZNF766!0.16!0.57!ZNF766;;chr19:56154958..56155027,+!p1@ZNF581!0.15!41.64!ZNF581;;chr10:96122682..96122730,-!p1@NOC3L!0.15!18.26!NOC3L;;chr3:52001448..52001478,-!p2@PCBP4!0.15!17.11!PCBP4;;chr12:77459306..77459365,-!p1@E2F7!0.15!15.40!E2F7;;chr4:26322419..26322479,+!p2@RBPJ!0.15!14.83!RBPJ;;chr7:99097863..99097936,-!p1@ZNF394!0.15!11.98!ZNF394;;chr19:14117085..14117141,-!p1@RFX1!0.15!11.98!RFX1;;chr19:56652643..56652683,+!p1@ZNF444!0.15!6.28!ZNF444;;chr19:19516464..19516492,+!p4@GATAD2A!0.15!5.70!GATAD2A;;chr11:62521614..62521646,-!p1@ZBTB3!0.15!5.70!ZBTB3;;chr3:75834687..75834720,-!p1@ZNF717!0.15!5.70!ZNF717;;chr19:19496624..19496660,+!p3@GATAD2A!0.15!5.13!GATAD2A;;chr2:85197924..85197955,+!p3@KCMF1!0.15!3.99!KCMF1;;chr4:4291837..4291859,-!p2@LYAR!0.15!3.42!LYAR;;chr20:49547593..49547611,-!p3@ADNP!0.15!3.42!ADNP;;chr5:92918894..92918912,+!p2@NR2F1!0.15!3.42!NR2F1;;chr6:45390025..45390076,+!p2@RUNX2!0.15!2.28!RUNX2;;chr19:56904880..56904919,-!p1@ZNF582!0.15!2.28!ZNF582;;chr19:52956798..52956843,+!p1@ZNF578!0.15!1.71!ZNF578;;chr19:53496768..53496799,-!p1@ZNF702P!0.15!1.14!ZNF702P;;chr1:41157326..41157337,+!p5@NFYC!0.15!1.14!NFYC;;chr1:8483723..8483752,-!p12@RERE!0.15!1.14!RERE;;chr1:8484294..8484307,-!p16@RERE!0.15!1.14!RERE;;chr3:178789648..178789661,-!p4@ZMAT3!0.15!1.14!ZMAT3;;chr3:33482052..33482116,-!p2@UBP1!0.15!1.14!UBP1;;chr19:31840130..31840160,-!p2@TSHZ3!0.15!1.14!TSHZ3;;chr12:54785074..54785122,-!p2@ZNF385A!0.15!1.14!ZNF385A;;chr8:145159277..145159282,+!p7@MAF1!0.15!1.14!MAF1;;chr5:43121586..43121601,+!p10@ZNF131!0.15!0.57!ZNF131;;chr6:31514622..31514641,+!p4@NFKBIL1!0.15!0.57!NFKBIL1;;chr7:127032363..127032382,-!p6@ZNF800!0.15!0.57!ZNF800;;chr7:77428248..77428259,+!p5@PHTF2!0.15!0.57!PHTF2;;chr15:67418119..67418162,+!p5@SMAD3!0.15!0.57!SMAD3;;chr15:76629097..76629120,+!p2@ISL2!0.15!0.57!ISL2;;chr18:3452133..3452150,+!p19@TGIF1!0.15!0.57!TGIF1;;chr1:23696348..23696363,-!p4@ZNF436!0.15!0.57!ZNF436;;chr2:24930357..24930402,+!p3@NCOA1!0.15!0.57!NCOA1;;chr8:145515263..145515299,+!p1@HSF1!0.14!88.99!HSF1;;chr19:42759266..42759290,-!p1@ERF!0.14!39.36!ERF;;chr19:3572925..3573014,+!p1@HMG20B!0.14!35.94!HMG20B;;chr2:242576460..242576600,-!p1@THAP4!0.14!18.26!THAP4;;chr4:87856129..87856186,+!p1@AFF1!0.14!16.54!AFF1;;chr16:2273558..2273637,+!p1@E4F1!0.14!11.41!E4F1;;chr21:44394645..44394737,+!p1@PKNOX1!0.14!9.70!PKNOX1;;chr4:146402997..146403020,+!p1@SMAD1!0.14!7.99!SMAD1;;chr10:96122645..96122675,-!p2@NOC3L!0.14!5.13!NOC3L;;chr19:19303619..19303651,+!p2@RFXANK!0.14!3.99!RFXANK;;chr2:242576641..242576731,-!p2@THAP4!0.14!3.99!THAP4;;chr2:66662249..66662267,+!p2@MEIS1!0.14!3.99!MEIS1;;chr1:8585945..8586056,-!p3@RERE!0.14!3.42!RERE;;chr7:99613250..99613264,+!p2@ZKSCAN1!0.14!2.85!ZKSCAN1;;chr16:1429627..1429662,-!p2@UNKL!0.14!2.85!UNKL;;chr17:41322208..41322250,-!p3@BRCA1!0.14!2.85!BRCA1;;chr18:45457478..45457517,-!p6@SMAD2!0.14!2.85!SMAD2;;chr16:71518504..71518542,-!p1@ZNF19!0.14!2.28!ZNF19;;chr19:36545291..36545314,-!p2@THAP8!0.14!2.28!THAP8;;chr5:158526917..158526932,-!p1@EBF1!0.14!2.28!EBF1;;chr7:86781778..86781789,+!p4@DMTF1!0.14!1.71!DMTF1;;chr8:72756063..72756125,-!p1@MSC!0.14!1.71!MSC;;chr1:61547781..61547809,+!p5@NFIA!0.14!1.71!NFIA;;chr19:12512062..12512094,-!p1@ZNF799!0.14!1.71!ZNF799;;chr9:73028387..73028418,-!p4@KLF9!0.14!1.71!KLF9;;chrX:119384566..119384585,+!p2@ZBTB33!0.14!1.14!ZBTB33;;chr5:176449727..176449734,+!p2@ZNF346!0.14!1.14!ZNF346;;chr7:100076723..100076737,-!p3@TSC22D4!0.14!1.14!TSC22D4;;
+|ffid_belonging_in_development=CL:0000134
 |fonse_cell_line=
 |fonse_cell_line_closure=

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FF:11346-117G5: Difference between revisions

From FANTOM5_SSTAR

Revision as of 20:43, 9 July 2012

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	Mozilla Cavendish skin modified by DaSch for the Web Community Wiki GitHub project page – Report a bug – Skin version: 2.6.0