FF:11398-118D3: Difference between revisions

Revision as of 20:54, 9 July 2012

Name:	Myoblast, donor3
Species:	Human (Homo sapiens)
Library ID:	{{{library_id}}}
Sample type:	{{{sample_category}}}
Genomic View:	UCSC
CAGEd-oPOSSUM:	link

Additional information

Sample information

strain	NA
tissue	skeletal muscle
dev stage	59 years old adult
sex	female
age	59
cell type	skeletal muscle myoblast
cell line	NA
company	Sciencell/3H
collaboration	FANTOM5 OSC CORE (contact: Al Forrest)
External link for information	[{{{sample_info_link}}} {{{sample_info_link}}}]

RNA information

lot number	SKM3
catalog number	SC3525
sample type	total RNA
extraction protocol (Details)	OP-RNA-extraction-totalRNA-TRIzol-isopropanol-v1.0

Download raw sequence, BAM & CTSS

Hg19

BAM	CTSS
[{{{hg19bam}}} download]	[{{{hg19ctss}}} donwload]

Hg38

BAM	CTSS
[{{{hg38bam}}} download]	[{{{hg38ctss}}} donwload]

Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.

Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. Analyst:NA link to dataset. data

Coexpression cluster	score
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral	0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate	0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural	0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial	0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel	0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS	0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils	0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural	0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis	-0.132
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy	0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood	0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate	0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma	0.333
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial	0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic	0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat	0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal	0
C113-thyroid-throat-lung-lymph-small-colon-trachea	0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma	0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus	0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea	0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal	0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula	0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD19	0
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils	0
C120-immature-salivary-tongue-skin-cervical-CD14-CD34	0
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B	0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal	0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils	0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte	0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus	0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain	0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil	0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP	0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small	0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD4	0
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar	0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin	0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived	0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma	0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis	0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum	0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal	0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic	0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal	0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal	0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen	0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen	0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B	0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair	0.235
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast	0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis	0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal	0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell	0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral	0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal	0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum	0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue	0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small	0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast	0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung	0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular	0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate	0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid	0
C156-plasma-splenic-hereditary-B-large-xeroderma-b	0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea	0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen	0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal	0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain	0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral	0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta	0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon	0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal	0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma	0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial	0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung	0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD4	0
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral	0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma	0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage	0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet	0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye	0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes	0.0715
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose	0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils	0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural	0
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19	-0.0504
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous	0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus	0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil	0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood	0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle	-0.169
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar	0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute	0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt	0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid	0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis	0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid	0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage	0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat	0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen	0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma	0
C190-colon-small-rectum-duodenum-appendix-temporal-oral	0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic	0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD4	0
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD14	0
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar	0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal	0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial	0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival	0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes	0.133
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma	0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast	0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat	0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed	-0.0486
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall	0
C202-salivary-skin-penis-tongue-uterus-cervical-immature	0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic	0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD34	0
C205-mycosis-cord-hairy-xeroderma-CD4-B-b	0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary	0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte	0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous	0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen	0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic	0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil	0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney	0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD34	0
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral	0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain	0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature	0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD34	0
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital	0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary	0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum	0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD19	0
C220-Adipocyte-mature-left-breast-skin-liver-adipose	0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular	0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte	-0.0821
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte	0.133
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal	0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal	0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal	0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue	0.317
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult	0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart	0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD14	0
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung	0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis	0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum	0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF7	0
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma	0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas	0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma	0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial	0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell	0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy	0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral	0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal	0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus	-0.048
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach	0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing	0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage	0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic	0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory	0
C247-pons-locus-medulla-spinal-paracentral-medial-occipital	0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast	0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial	0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall	0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD4	0
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue	0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma	0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum	0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris	0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast	0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla	0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral	0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric	0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing	0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole	0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood	0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal	0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms	0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil	0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute	0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD8	0
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast	0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear	0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate	0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD4	0
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung	0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth	-0.0451
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum	0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil	0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast	0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte	0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal	0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal	0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma	0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory	0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial	0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic	0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD4	0
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small	0.215
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat	0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular	0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus	0.0715
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic	0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial	0.0715
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal	0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal	0
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left	0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart	0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature	0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea	0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal	0.0715
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD34	0
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral	0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte	0.976
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed	0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral	0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital	0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood	0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala	0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal	0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils	0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic	0.498
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid	0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole	0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus	0.187
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea	0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory	0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen	0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile	0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula	0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt	0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea	0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms	0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD133	0
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus	0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small	0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal	0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon	0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder	0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature	0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS	0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel	0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix	0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus	0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma	0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas	0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma	0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas	0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma	0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary	0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature	0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma	0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue	0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural	0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H9	0
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic	0.133
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature	0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical	0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b	0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph	0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute	0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic	0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils	0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus	0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung	0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma	0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK	0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast	0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue	0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate	0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left	0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal	0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy	0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral	0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell	0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD8	0
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea	0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal	0.446
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD34	0
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast	0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid	0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD34	0
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic	0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon	0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma	0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma	0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic	0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived	0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic	0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left	0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen	0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair	0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole	0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular	0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma	0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid	0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix	0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain	0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole	0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid	0

Repeat families with enriched expression in this sampleSummary:Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed. Analyst:NA link to dataset. data no result for this sample

TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifsSummary:Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression Analyst: Michiel de Hoon link to dataset. data

library id: CNhs11908

Jaspar motif	Logo	P-value
MA0002.2	MA0002.2	0.752
MA0003.1	MA0003.1	0.504
MA0004.1	MA0004.1	0.543
MA0006.1	MA0006.1	0.447
MA0007.1	MA0007.1	0.584
MA0009.1	MA0009.1	0.0773
MA0014.1	MA0014.1	0.198
MA0017.1	MA0017.1	0.029
MA0018.2	MA0018.2	0.374
MA0019.1	MA0019.1	0.195
MA0024.1	MA0024.1	0.148
MA0025.1	MA0025.1	0.0628
MA0027.1	MA0027.1	0.656
MA0028.1	MA0028.1	0.00737
MA0029.1	MA0029.1	0.133
MA0030.1	MA0030.1	0.168
MA0031.1	MA0031.1	0.589
MA0035.2	MA0035.2	0.00817
MA0038.1	MA0038.1	0.0611
MA0039.2	MA0039.2	0.246
MA0040.1	MA0040.1	0.531
MA0041.1	MA0041.1	0.535
MA0042.1	MA0042.1	0.935
MA0043.1	MA0043.1	0.0149
MA0046.1	MA0046.1	0.786
MA0047.2	MA0047.2	0.246
MA0048.1	MA0048.1	0.685
MA0050.1	MA0050.1	8.82146e-6
MA0051.1	MA0051.1	0.0323
MA0052.1	MA0052.1	0.508
MA0055.1	MA0055.1	0.809
MA0057.1	MA0057.1	0.829
MA0058.1	MA0058.1	0.259
MA0059.1	MA0059.1	0.546
MA0060.1	MA0060.1	0.247
MA0061.1	MA0061.1	0.00114
MA0062.2	MA0062.2	0.108
MA0065.2	MA0065.2	0.00238
MA0066.1	MA0066.1	0.388
MA0067.1	MA0067.1	0.381
MA0068.1	MA0068.1	0.137
MA0069.1	MA0069.1	0.365
MA0070.1	MA0070.1	0.33
MA0071.1	MA0071.1	0.234
MA0072.1	MA0072.1	0.296
MA0073.1	MA0073.1	0.809
MA0074.1	MA0074.1	0.215
MA0076.1	MA0076.1	0.00303
MA0077.1	MA0077.1	0.91
MA0078.1	MA0078.1	0.171
MA0079.2	MA0079.2	0.182
MA0080.2	MA0080.2	7.0012e-7
MA0081.1	MA0081.1	0.619
MA0083.1	MA0083.1	0.0308
MA0084.1	MA0084.1	0.0942
MA0087.1	MA0087.1	0.352
MA0088.1	MA0088.1	0.966
MA0090.1	MA0090.1	8.66853e-5
MA0091.1	MA0091.1	0.263
MA0092.1	MA0092.1	0.647
MA0093.1	MA0093.1	0.413
MA0099.2	MA0099.2	0.0621
MA0100.1	MA0100.1	0.273
MA0101.1	MA0101.1	0.0219
MA0102.2	MA0102.2	0.168
MA0103.1	MA0103.1	9.72742e-6
MA0104.2	MA0104.2	0.341
MA0105.1	MA0105.1	7.31771e-6
MA0106.1	MA0106.1	0.675
MA0107.1	MA0107.1	0.0114
MA0108.2	MA0108.2	5.87133e-6
MA0111.1	MA0111.1	0.241
MA0112.2	MA0112.2	0.0265
MA0113.1	MA0113.1	0.848
MA0114.1	MA0114.1	0.109
MA0115.1	MA0115.1	0.0507
MA0116.1	MA0116.1	0.00117
MA0117.1	MA0117.1	0.812
MA0119.1	MA0119.1	0.442
MA0122.1	MA0122.1	0.726
MA0124.1	MA0124.1	0.664
MA0125.1	MA0125.1	0.611
MA0131.1	MA0131.1	0.992
MA0135.1	MA0135.1	0.236
MA0136.1	MA0136.1	7.51352e-4
MA0137.2	MA0137.2	0.688
MA0138.2	MA0138.2	0.235
MA0139.1	MA0139.1	0.0204
MA0140.1	MA0140.1	0.135
MA0141.1	MA0141.1	0.197
MA0142.1	MA0142.1	0.0134
MA0143.1	MA0143.1	0.428
MA0144.1	MA0144.1	0.369
MA0145.1	MA0145.1	0.432
MA0146.1	MA0146.1	0.499
MA0147.1	MA0147.1	0.282
MA0148.1	MA0148.1	0.674
MA0149.1	MA0149.1	0.787
MA0150.1	MA0150.1	0.615
MA0152.1	MA0152.1	0.177
MA0153.1	MA0153.1	0.976
MA0154.1	MA0154.1	0.00232
MA0155.1	MA0155.1	0.247
MA0156.1	MA0156.1	0.34
MA0157.1	MA0157.1	0.361
MA0159.1	MA0159.1	0.0808
MA0160.1	MA0160.1	0.133
MA0162.1	MA0162.1	0.804
MA0163.1	MA0163.1	2.46045e-6
MA0164.1	MA0164.1	0.739
MA0258.1	MA0258.1	0.00108
MA0259.1	MA0259.1	0.652

FANTOM5 phase1 novel unique motifsSummary:Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above Analyst: Michiel de Hoon link to dataset. data

library id: CNhs11908

Novel motif	Logo	P-value
1	1	0.255
10	10	0.453
100	100	0.47
101	101	0.204
102	102	0.601
103	103	0.814
104	104	0.927
105	105	0.148
106	106	0.00327
107	107	0.757
108	108	0.306
109	109	0.686
11	11	0.122
110	110	0.412
111	111	0.0629
112	112	0.0319
113	113	0.325
114	114	0.265
115	115	0.179
116	116	0.544
117	117	0.434
118	118	0.388
119	119	0.348
12	12	0.921
120	120	0.477
121	121	0.463
122	122	0.0701
123	123	1.18242e-4
124	124	0.0146
125	125	0.818
126	126	0.859
127	127	0.829
128	128	0.111
129	129	0.699
13	13	0.587
130	130	0.0269
131	131	0.45
132	132	0.753
133	133	0.196
134	134	0.171
135	135	0.423
136	136	0.357
137	137	0.802
138	138	0.0667
139	139	0.0123
14	14	0.437
140	140	0.00903
141	141	0.081
142	142	0.967
143	143	0.264
144	144	0.904
145	145	0.442
146	146	0.714
147	147	0.471
148	148	0.146
149	149	0.941
15	15	0.658
150	150	0.453
151	151	0.558
152	152	0.671
153	153	0.887
154	154	0.723
155	155	0.00563
156	156	0.538
157	157	0.077
158	158	0.0209
159	159	0.328
16	16	0.922
160	160	0.0259
161	161	0.012
162	162	0.969
163	163	0.312
164	164	0.18
165	165	0.132
166	166	0.641
167	167	0.312
168	168	0.863
169	169	0.39
17	17	0.433
18	18	0.208
19	19	0.793
2	2	0.436
20	20	0.719
21	21	0.991
22	22	0.853
23	23	0.344
24	24	0.999
25	25	0.701
26	26	0.195
27	27	0.465
28	28	0.595
29	29	0.489
3	3	0.275
30	30	0.927
31	31	0.846
32	32	0.812
33	33	0.692
34	34	0.251
35	35	0.0296
36	36	0.004
37	37	0.443
38	38	0.331
39	39	0.453
4	4	0.433
40	40	0.134
41	41	0.43
42	42	0.161
43	43	0.398
44	44	0.367
45	45	0.307
46	46	0.222
47	47	0.123
48	48	0.278
49	49	0.0632
5	5	0.747
50	50	0.639
51	51	0.424
52	52	0.652
53	53	0.173
54	54	0.559
55	55	0.524
56	56	0.741
57	57	0.486
58	58	0.172
59	59	0.0792
6	6	0.958
60	60	0.0768
61	61	0.755
62	62	0.0939
63	63	0.596
64	64	0.0527
65	65	0.103
66	66	0.568
67	67	0.776
68	68	0.352
69	69	0.817
7	7	0.501
70	70	0.0434
71	71	0.213
72	72	0.525
73	73	0.549
74	74	0.11
75	75	0.223
76	76	0.392
77	77	0.797
78	78	0.619
79	79	0.968
8	8	0.333
80	80	0.41
81	81	0.144
82	82	0.0878
83	83	0.46
84	84	0.748
85	85	0.149
86	86	0.999
87	87	0.101
88	88	0.188
89	89	0.526
9	9	0.759
90	90	0.581
91	91	0.0516
92	92	0.662
93	93	0.907
94	94	0.421
95	95	0.593
96	96	0.881
97	97	0.723
98	98	0.105
99	99	0.47

de novo motifs identified by HOMER in promoters active in this sampleSummary:The result of HOMER in this sample is shown. Analyst:NA library id: CNhs11908

FANTOM5 (FF) ontology

Direct parent terms

is_a relathionship
EFO:0002091 biological replicate
FF:0000164 human skeletal muscle myoblast sample

Ancestor terms (non development)Summary:Connected ontology terms with is_a, part_of or located_in relationship Analyst: Hideya Kawaji link to source data data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000055 (non-terminally differentiated cell)
0000003 (native cell)
0000548 (animal cell)
0000680 (muscle precursor cell)
0002321 (embryonic cell)
0002371 (somatic cell)
0000056 (myoblast)
0000255 (eukaryotic cell)
0000515 (skeletal muscle myoblast)

UBERON: Anatomy
0000468 (multi-cellular organism)
0001134 (skeletal muscle tissue)
0000479 (tissue)
0004120 (mesoderm-derived structure)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0002036 (striated muscle tissue)
0002385 (muscle tissue)
0010317 (germ layer / neural crest derived structure)
0001015 (musculature)
0002204 (musculoskeletal system)
0000383 (musculature of body)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000164 (human skeletal muscle myoblast sample)

Ancestor terms (development)Summary:Connected ontology terms with develops_from, derives_from or preceded_by relationship Analyst: Hideya Kawaji link to source data data
CL:0000355 (multi-potent skeletal muscle stem cell)
CL:0000222 (mesodermal cell)
CL:0000515 (skeletal muscle myoblast)

@@ Line 10: / Line 10: @@
 |def=
 |expression_enrichment_score=chr12:81110684..81110700,+!p1@MYF5!2.95!886.71!MYF5;;chr11:17741111..17741124,+!p1@MYOD1!1.88!74.85!MYOD1;;chr12:54410664..54410684,+!p1@HOXC4,p1@HOXC5,p1@HOXC6!1.83!66.07!HOXC5;;chr7:19157248..19157268,-!p1@TWIST1!1.80!167.42!TWIST1;;chr1:40105299..40105326,-!p1@HEYL!1.71!50.14!HEYL;;chrX:2418949..2419024,-!p1@DHRSX,p1@ZBED1!1.42!25.61!ZBED1;;chr10:131762504..131762555,-!p1@EBF3!1.42!25.25!EBF3;;chr12:54402745..54402788,+!p1@HOXC8!1.33!20.41!HOXC8;;chr14:61116183..61116208,-!p1@SIX1!1.32!73.95!SIX1;;chr12:66218255..66218304,+!p3@HMGA2!1.21!40.47!HMGA2;;chr4:111558135..111558198,-!p2@PITX2!1.21!15.40!PITX2;;chr8:49833948..49833973,-!p2@SNAI2!1.18!88.28!SNAI2;;chr14:62162285..62162296,+!p3@HIF1A!1.17!71.62!HIF1A;;chr14:62162258..62162269,+!p2@HIF1A!1.15!124.63!HIF1A;;chr12:54410639..54410659,+!p2@HOXC4,p2@HOXC5,p2@HOXC6!1.15!13.25!HOXC5;;chr12:54393880..54393962,+!p1@HOXC9!1.13!12.53!HOXC9;;chr2:19558373..19558392,-!p1@OSR1!1.11!32.77!OSR1;;chr11:17741254..17741282,+!p2@MYOD1!1.11!12.00!MYOD1;;chr15:57511609..57511651,+!p2@TCF12!1.06!17.91!TCF12;;chr12:66218598..66218645,+!p2@HMGA2!1.05!47.45!HMGA2;;chr2:85981073..85981091,+!p5@ATOH8!1.04!9.85!ATOH8;;chr8:49833978..49833996,-!p1@SNAI2!1.03!200.73!SNAI2;;chr21:36421535..36421610,-!p2@RUNX1!1.02!34.74!RUNX1;;chr15:42749722..42749739,-!p2@ZFP106!1.02!17.19!ZFP106;;chr2:119605214..119605230,-!p1@EN1!1.02!9.49!EN1;;chr2:85980951..85981004,+!p1@ATOH8!1.01!15.40!ATOH8;;chr1:170632285..170632309,+!p1@PRRX1!1.01!10.39!PRRX1;;chr2:85981107..85981120,+!p3@ATOH8!1.01!9.31!ATOH8;;chr12:54332608..54332636,+!p1@HOXC13!1.01!9.13!HOXC13;;chr2:200322654..200322707,-!p2@SATB2!0.95!11.82!SATB2;;chr11:65686802..65686818,+!p6@DRAP1!0.93!13.43!DRAP1;;chr20:30193083..30193098,+!p1@ID1!0.92!621.16!ID1;;chr16:86600426..86600441,+!p1@FOXC2!0.91!18.26!FOXC2;;chr14:61116168..61116180,-!p2@SIX1!0.90!8.06!SIX1;;chr3:147111231..147111281,+!p3@ZIC1!0.90!6.98!ZIC1;;chr1:170633348..170633399,+!p2@PRRX1!0.88!9.13!PRRX1;;chr17:46682321..46682362,-!p1@HOXB6!0.88!6.63!HOXB6;;chr17:48072574..48072597,-!p1@DLX3!0.88!6.63!DLX3;;chr11:125034640..125034655,+!p1@PKNOX2!0.87!6.45!PKNOX2;;chr12:54380404..54380433,+!p3@HOXC10!0.86!6.27!HOXC10;;chr22:19748231..19748317,+!p1@TBX1!0.86!6.27!TBX1;;chr1:54204818..54204870,-!p@chr1:54204818..54204870,-!0.85!6.45!GLIS1;;chr1:23885981..23886002,-!p1@ID3!0.84!1113.76!ID3;;chr12:66218836..66218888,+!p1@HMGA2!0.83!58.02!HMGA2;;chr11:65686732..65686756,+!p2@DRAP1!0.83!25.96!DRAP1;;chr16:54320617..54320643,-!p3@IRX3!0.83!7.52!IRX3;;chr12:54402729..54402743,+!p3@HOXC8!0.83!5.73!HOXC8;;chr15:83953397..83953425,-!p1@BNC1!0.82!6.45!BNC1;;chr1:170632959..170632987,+!p4@PRRX1!0.82!6.27!PRRX1;;chr1:119530493..119530572,-!p1@TBX15!0.80!5.37!TBX15;;chr12:54402790..54402805,+!p2@HOXC8!0.80!5.37!HOXC8;;chr12:53614115..53614154,-!p1@RARG!0.79!29.72!RARG;;chr3:147127142..147127168,+!p1@ZIC1!0.79!5.19!ZIC1;;chr14:62162224..62162254,+!p1@HIF1A!0.78!801.30!HIF1A;;chr16:54320158..54320200,-!p5@IRX3!0.78!7.52!IRX3;;chr17:46687959..46688007,-!p2@HOXB7!0.78!7.16!HOXB7;;chr2:85980919..85980942,+!p4@ATOH8!0.78!5.37!ATOH8;;chr12:54378923..54378966,+!p1@HOXC10!0.78!5.01!HOXC10;;chr1:203055129..203055147,-!p1@MYOG!0.78!5.01!MYOG;;chr7:19157043..19157088,-!p2@TWIST1!0.77!13.25!TWIST1;;chr19:13134772..13134822,+!p2@NFIX!0.77!7.52!NFIX;;chr17:46688334..46688385,-!p1@HOXB7!0.77!7.34!HOXB7;;chr3:147111198..147111225,+!p4@ZIC1!0.77!4.83!ZIC1;;chr1:170632250..170632277,+!p7@PRRX1!0.77!4.83!PRRX1;;chr2:45236540..45236577,-!p1@SIX2!0.75!4.66!SIX2;;chr3:21792682..21792720,-!p1@ZNF385D!0.75!4.66!ZNF385D;;chr11:46299199..46299233,+!p1@CREB3L1!0.74!25.61!CREB3L1;;chr1:170633262..170633285,+!p3@PRRX1!0.74!5.19!PRRX1;;chr4:26322267..26322334,+!p3@RBPJ!0.73!11.46!RBPJ;;chr12:66218378..66218401,+!p6@HMGA2!0.73!7.16!HMGA2;;chr18:72922743..72922761,+!p3@TSHZ1!0.72!15.40!TSHZ1;;chr12:66218212..66218244,+!p5@HMGA2!0.72!6.45!HMGA2;;chr4:111544219..111544240,-!p1@PITX2!0.72!4.30!PITX2;;chr2:238536207..238536290,+!p2@LRRFIP1!0.71!45.48!LRRFIP1;;chr16:54320646..54320672,-!p2@IRX3!0.71!6.63!IRX3;;chrX:66763856..66763896,+!p1@AR!0.71!6.27!AR;;chr16:54320101..54320125,-!p4@IRX3!0.71!6.09!IRX3;;chr3:170076314..170076334,+!p2@SKIL!0.71!5.55!SKIL;;chr17:46622440..46622477,-!p5@HOXB2!0.71!4.66!HOXB2;;chr12:54332687..54332701,+!p3@HOXC13!0.71!4.12!HOXC13;;chr12:54394309..54394336,+!p2@HOXC9!0.71!4.12!HOXC9;;chr12:54394416..54394467,+!p5@HOXC9!0.71!4.12!HOXC9;;chr11:113930425..113930471,+!p1@ZBTB16!0.70!6.09!ZBTB16;;chr2:85981008..85981025,+!p7@ATOH8!0.69!3.94!ATOH8;;chr3:114343768..114343822,-!p1@ZBTB20!0.68!18.80!ZBTB20;;chr20:39946361..39946379,-!p2@ZHX3!0.68!12.53!ZHX3;;chr10:31607702..31607755,+!p3@ZEB1!0.68!4.48!ZEB1;;chr10:104001259..104001274,-!p1@PITX3!0.68!3.76!PITX3;;chr2:85981027..85981047,+!p8@ATOH8!0.68!3.76!ATOH8;;chr2:71127699..71127744,+!p1@VAX2!0.67!8.24!VAX2;;chr2:85981222..85981259,+!p2@ATOH8!0.67!6.45!ATOH8;;chr8:67525443..67525459,-!p2@MYBL1!0.66!5.73!MYBL1;;chr19:2867325..2867348,+!p1@ZNF556!0.66!3.58!ZNF556;;chr11:65687362..65687436,+!p3@DRAP1!0.65!18.26!DRAP1;;chr11:65667884..65667895,-!p2@FOSL1!0.65!15.22!FOSL1;;chr8:67525473..67525518,-!p1@MYBL1!0.65!8.77!MYBL1;;chr5:174151553..174151610,+!p1@MSX2!0.65!6.27!MSX2;;chr12:66218183..66218209,+!p4@HMGA2!0.64!7.16!HMGA2;;chr12:66218923..66218934,+!p14@HMGA2!0.64!3.40!HMGA2;;chr2:176994408..176994492,+!p1@HOXD8!0.64!3.40!HOXD8;;chr1:170633058..170633084,+!p5@PRRX1!0.64!3.40!PRRX1;;chr6:108977520..108977534,+!p7@FOXO3!0.64!3.40!FOXO3;;chr16:31076332..31076388,-!p3@ZNF668!0.64!3.40!ZNF668;;chr11:65667846..65667868,-!p1@FOSL1!0.63!103.32!FOSL1;;chr2:145275162..145275202,-!p2@ZEB2!0.63!22.38!ZEB2;;chr2:102091144..102091183,-!p2@RFX8!0.63!3.22!RFX8;;chr3:147127177..147127194,+!p2@ZIC1!0.63!3.22!ZIC1;;chr11:125034605..125034636,+!p2@PKNOX2!0.63!3.22!PKNOX2;;chr7:63505799..63505904,+!p1@ZNF727!0.63!3.22!ZNF727;;chr19:13136130..13136165,+!p6@NFIX!0.62!4.48!NFIX;;chr8:106330656..106330684,+!p1@ZFPM2!0.61!9.31!ZFPM2;;chr8:106330696..106330719,+!p2@ZFPM2!0.61!4.12!ZFPM2;;chr2:45236579..45236596,-!p2@SIX2!0.61!3.04!SIX2;;chr11:17741084..17741094,+!p3@MYOD1!0.61!3.04!MYOD1;;chr12:54380036..54380091,+!p4@HOXC10!0.61!3.04!HOXC10;;chr12:66218420..66218439,+!p12@HMGA2!0.61!3.04!HMGA2;;chr12:115121962..115121987,-!p1@TBX3!0.60!29.90!TBX3;;chr3:178789522..178789564,-!p2@ZMAT3!0.60!26.32!ZMAT3;;chr2:208030647..208030689,-!p1@KLF7!0.59!29.37!KLF7;;chr17:46622070..46622109,-!p1@HOXB2!0.59!7.34!HOXB2;;chr11:65687222..65687240,+!p7@DRAP1!0.59!3.94!DRAP1;;chr12:66218443..66218461,+!p8@HMGA2!0.59!3.94!HMGA2;;chr10:131762385..131762398,-!p4@EBF3!0.59!2.86!EBF3;;chr12:66218904..66218913,+!p11@HMGA2!0.59!2.86!HMGA2;;chr2:102091566..102091581,-!p1@RFX8!0.59!2.86!RFX8;;chr2:119604456..119604501,-!p2@EN1!0.59!2.86!EN1;;chr7:27196267..27196311,-!p1@HOXA7!0.59!2.86!HOXA7;;chr17:46621146..46621180,-!p10@HOXB2!0.59!2.86!HOXB2;;chr1:44513995..44514031,+!p1@KLF17!0.59!2.86!KLF17;;chr8:77593474..77593612,+!p1@ZFHX4!0.58!14.15!ZFHX4;;chr7:150946015..150946070,-!p3@SMARCD3!0.58!6.98!SMARCD3;;chr2:200323414..200323455,-!p1@SATB2!0.58!6.80!SATB2;;chr3:21792585..21792625,-!p2@ZNF385D!0.58!3.22!ZNF385D;;chr18:53068911..53068935,-!p4@TCF4!0.58!3.22!TCF4;;chr2:239756671..239756732,+!p1@TWIST2!0.57!10.21!TWIST2;;chr16:54320675..54320715,-!p1@IRX3!0.57!6.63!IRX3;;chr1:158985493..158985535,+!p4@IFI16!0.57!4.48!IFI16;;chr21:36421347..36421380,-!p8@RUNX1!0.57!2.69!RUNX1;;chr5:174151612..174151633,+!p2@MSX2!0.57!2.69!MSX2;;chr11:125034586..125034604,+!p3@PKNOX2!0.57!2.69!PKNOX2;;chr12:85673977..85674015,+!p1@ALX1!0.57!2.69!ALX1;;chr2:5832508..5832524,+!p1@SOX11!0.57!2.69!SOX11;;chr2:85980868..85980880,+!p12@ATOH8!0.57!2.69!ATOH8;;chr2:85980903..85980914,+!p11@ATOH8!0.57!2.69!ATOH8;;chr5:321810..321877,+!p1@AHRR!0.56!9.85!AHRR;;chr20:39946400..39946423,-!p3@ZHX3!0.56!5.55!ZHX3;;chr5:134369905..134369972,-!p1@PITX1!0.56!4.48!PITX1;;chr11:46299539..46299620,+!p2@CREB3L1!0.55!4.83!CREB3L1;;chr6:1312325..1312340,+!p1@FOXQ1!0.55!4.66!FOXQ1;;chr1:214161272..214161322,+!p1@PROX1!0.55!3.94!PROX1;;chr5:92918919..92918942,+!p1@NR2F1!0.54!13.43!NR2F1;;chr5:92918768..92918783,+!p8@NR2F1!0.54!2.51!NR2F1;;chr1:170632477..170632506,+!p6@PRRX1!0.54!2.51!PRRX1;;chr1:40105347..40105358,-!p2@HEYL!0.54!2.51!HEYL;;chr3:147139053..147139112,+!p5@ZIC1!0.54!2.51!ZIC1;;chr10:31610110..31610159,+!p2@ZEB1!0.54!2.51!ZEB1;;chr2:239756739..239756755,+!p2@TWIST2!0.53!4.66!TWIST2;;chr8:72756667..72756736,-!p2@MSC!0.53!4.12!MSC;;chr19:31840130..31840160,-!p2@TSHZ3!0.53!4.12!TSHZ3;;chr17:46622205..46622218,-!p3@HOXB2!0.53!2.86!HOXB2;;chr12:96588143..96588185,+!p1@ELK3!0.52!36.17!ELK3;;chr11:113930291..113930339,+!p2@ZBTB16!0.52!4.30!ZBTB16;;chr8:103665947..103665981,-!p3@KLF10!0.52!3.58!KLF10;;chr6:45390077..45390105,+!p9@RUNX2!0.52!3.22!RUNX2;;chr9:16870659..16870675,-!p2@BNC2!0.52!3.04!BNC2;;chr4:111558118..111558133,-!p5@PITX2!0.52!2.33!PITX2;;chr13:37494248..37494260,-!p3@SMAD9!0.52!2.33!SMAD9;;chr13:37494275..37494304,-!p2@SMAD9!0.52!2.33!SMAD9;;chr12:96588219..96588263,+!p2@ELK3!0.51!20.95!ELK3;;chr5:133450365..133450444,+!p1@TCF7!0.51!12.89!TCF7;;chr13:73633131..73633149,+!p1@KLF5!0.50!30.44!KLF5;;chr1:211433275..211433335,+!p2@RCOR3!0.50!8.24!RCOR3;;chr21:36260295..36260310,-!p3@RUNX1!0.50!3.94!RUNX1;;chr4:26322373..26322393,+!p4@RBPJ!0.50!3.58!RBPJ;;chr11:65687243..65687276,+!p8@DRAP1!0.50!3.22!DRAP1;;chr19:23299814..23299844,+!p1@ZNF730!0.50!2.86!ZNF730;;chr16:54320280..54320291,-!p9@IRX3!0.50!2.15!IRX3;;chr3:21792631..21792665,-!p3@ZNF385D!0.50!2.15!ZNF385D;;chr12:54332652..54332671,+!p2@HOXC13!0.50!2.15!HOXC13;;chr12:54378864..54378884,+!p6@HOXC10!0.50!2.15!HOXC10;;chr16:67063142..67063153,+!p4@CBFB!0.49!3.40!CBFB;;chr11:65687158..65687216,+!p4@DRAP1!0.48!15.04!DRAP1;;chr7:150945754..150945789,-!p2@SMARCD3!0.48!7.88!SMARCD3;;chr9:16870710..16870763,-!p1@BNC2!0.48!4.12!BNC2;;chr12:66218573..66218596,+!p7@HMGA2!0.48!3.40!HMGA2;;chr11:17741228..17741243,+!p4@MYOD1!0.47!1.97!MYOD1;;chr12:54379029..54379057,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OC3L!0.17!5.55!NOC3L;;chr6:27440837..27440912,-!p1@ZNF184!0.17!5.37!ZNF184;;chr19:11998584..11998649,+!p1@ZNF69!0.17!5.19!ZNF69;;chr8:37963407..37963454,+!p2@ASH2L!0.17!3.22!ASH2L;;chr6:109804367..109804402,-!p2@ZBTB24!0.17!3.04!ZBTB24;;chrX:106960221..106960236,-!p3@TSC22D3!0.17!2.86!TSC22D3;;chr11:12696002..12696022,+!p2@TEAD1!0.17!2.51!TEAD1;;chr3:44754126..44754171,+!p1@ZNF502!0.17!2.51!ZNF502;;chr1:211432823..211432851,+!p3@RCOR3!0.17!2.51!RCOR3;;chr7:99102592..99102620,+!p3@ZKSCAN5!0.17!2.15!ZKSCAN5;;chr4:56412767..56412799,-!p3@CLOCK!0.17!2.15!CLOCK;;chr12:48298765..48298783,-!p2@VDR!0.17!1.97!VDR;;chr11:7041554..7041602,-!p1@ZNF214!0.17!1.79!ZNF214;;chr12:10875351..10875422,-!p4@CSDA!0.17!1.79!CSDA;;chr10:22292675..22292686,-!p3@DNAJC1!0.17!1.43!DNAJC1;;chr13:41635104..41635124,-!p6@ELF1!0.17!1.43!ELF1;;chr5:132299037..132299048,-!p7@AFF4!0.17!1.43!AFF4;;chr19:12075844..12075880,+!p3@ZNF763!0.17!1.43!ZNF763;;chr2:169312600..169312606,+!p2@CERS6!0.17!1.25!CERS6;;chr19:56879534..56879615,+!p3@ZNF542!0.17!1.25!ZNF542;;chr6:56954905..56954915,+!p4@ZNF451!0.17!1.25!ZNF451;;chr8:145159846..145159889,+!p6@MAF1!0.17!1.07!MAF1;;chr3:23986876..23986885,+!p4@NR1D2!0.17!1.07!NR1D2;;chr3:32023232..32023273,+!p1@ZNF860!0.17!1.07!ZNF860;;chr4:103422076..103422117,+!p5@NFKB1!0.17!1.07!NFKB1;;chr15:66994615..66994630,+!p3@SMAD6!0.17!1.07!SMAD6;;chr17:42297226..42297246,-!p14@UBTF!0.17!1.07!UBTF;;chr19:13106383..13106423,+!p8@NFIX!0.17!0.90!NFIX;;chr19:20011731..20011743,+!p3@ZNF93!0.17!0.90!ZNF93;;chr2:148779187..148779222,+!p5@MBD5!0.17!0.90!MBD5;;chr4:87928085..87928097,+!p17@AFF1!0.17!0.90!AFF1;;chr17:41623075..41623101,-!p9@ETV4!0.17!0.72!ETV4;;chr18:53255839..53255854,-!p13@TCF4!0.17!0.72!TCF4;;chr19:11877923..11877945,+!p3@ZNF441!0.17!0.72!ZNF441;;chr19:37329598..37329605,-!p4@ZNF790!0.17!0.72!ZNF790;;chr6:135502408..135502459,+!p2@MYB!0.17!0.72!MYB;;chr6:44355325..44355340,+!p4@CDC5L!0.17!0.72!CDC5L;;chr8:146024397..146024416,+!p2@ZNF517!0.17!0.72!ZNF517;;chr13:73636252..73636307,+!p2@KLF5!0.17!0.72!KLF5;;chr3:52008016..52008071,-!p1@ABHD14A-ACY1,p1@ABHD14B,p1@PCBP4!0.16!75.92!PCBP4;;chr7:137686791..137686821,-!p1@CREB3L2!0.16!37.07!CREB3L2;;chr19:20844368..20844407,-!p1@ZNF626!0.16!17.91!ZNF626;;chr3:129158715..129158766,-!p2@MBD4!0.16!11.82!MBD4;;chr6:108882109..108882173,+!p2@FOXO3!0.16!6.27!FOXO3;;chr12:48298785..48298828,-!p1@VDR!0.16!6.27!VDR;;chr12:7079780..7079791,-!p2@PHB2!0.16!6.09!PHB2;;chr2:95831529..95831569,+!p1@ZNF2!0.16!5.37!ZNF2;;chr9:116638565..116638606,+!p1@ZNF618!0.16!4.83!ZNF618;;chr19:2944907..2944981,-!p1@ZNF77!0.16!4.83!ZNF77;;chrX:131623044..131623089,-!p1@MBNL3!0.16!4.66!MBNL3;;chr2:208394817..208394834,+!p3@CREB1!0.16!4.48!CREB1;;chr18:5296001..5296045,-!p1@ZFP161!0.16!4.30!ZFP161;;chr1:8483878..8483907,-!p4@RERE!0.16!4.30!RERE;;chr14:73360799..73360817,-!p1@DPF3!0.16!3.76!DPF3;;chr4:47916543..47916580,-!p2@NFXL1!0.16!3.58!NFXL1;;chr19:37096194..37096235,+!p1@ZNF382!0.16!3.40!ZNF382;;chr4:1873155..1873185,+!p3@WHSC1!0.16!2.86!WHSC1;;chr12:27485762..27485776,+!p3@ARNTL2!0.16!2.69!ARNTL2;;chr19:52674853..52674892,-!p2@ZNF836!0.16!2.69!ZNF836;;chr19:8942909..8942953,-!p2@ZNF558!0.16!2.33!ZNF558;;chr1:211432887..211432903,+!p4@RCOR3!0.16!2.15!RCOR3;;chr10:77161133..77161176,-!p3@ZNF503!0.16!1.97!ZNF503;;chr2:37458749..37458766,-!p2@CEBPZ!0.16!1.97!CEBPZ;;chr19:24269949..24269969,+!p3@ZNF254!0.16!1.97!ZNF254;;chr1:8483821..8483845,-!p11@RERE!0.16!1.79!RERE;;chrX:47341928..47342010,-!p2@ZNF41!0.16!1.79!ZNF41;;chr20:32274150..32274166,-!p2@E2F1!0.16!1.61!E2F1;;chr2:28616316..28616327,+!p5@FOSL2!0.16!1.43!FOSL2;;chr6:45389835..45389861,+!p7@RUNX2!0.16!1.25!RUNX2;;chr7:100076723..100076737,-!p3@TSC22D4!0.16!1.25!TSC22D4;;chr14:64971404..64971415,+!p7@ZBTB1!0.16!1.07!ZBTB1;;chr2:208030705..208030718,-!p7@KLF7!0.16!1.07!KLF7;;chr4:1873216..1873238,+!p5@WHSC1!0.16!0.90!WHSC1;;chr6:136599737..136599767,-!p2@BCLAF1!0.16!0.90!BCLAF1;;chr6:151712922..151712942,-!p6@ZBTB2!0.16!0.90!ZBTB2;;chrX:119384725..119384736,+!p5@ZBTB33!0.16!0.90!ZBTB33;;chr15:56535922..56535936,-!p5@RFX7!0.16!0.90!RFX7;;chr14:35873101..35873119,-!p6@NFKBIA!0.16!0.90!NFKBIA;;chr4:2264015..2264041,-!p4@MXD4!0.16!0.72!MXD4;;chr6:130339753..130339762,+!p2@L3MBTL3!0.16!0.72!L3MBTL3;;chr8:128752734..128752763,+!p13@MYC!0.16!0.72!MYC;;chr19:24216327..24216345,+!p5@ZNF254!0.16!0.72!ZNF254;;chr17:41623667..41623682,-!p8@ETV4!0.16!0.54!ETV4;;chr6:35465058..35465077,-!p2@TEAD3!0.16!0.54!TEAD3;;chr19:11071685..11071798,+!p1@SMARCA4!0.15!35.28!SMARCA4;;chr16:67867749..67867852,-!p1@CENPT!0.15!29.01!CENPT;;chr16:11891048..11891130,-!p1@ZC3H7A!0.15!24.71!ZC3H7A;;chr1:67390665..67390698,+!p1@MIER1!0.15!17.19!MIER1;;chr1:37940170..37940190,+!p1@ZC3H12A!0.15!15.04!ZC3H12A;;chr16:68573182..68573228,+!p1@ZFP90!0.15!11.64!ZFP90;;chr6:116989916..116989979,-!p1@ZUFSP!0.15!11.28!ZUFSP;;chr19:52901094..52901134,+!p1@ZNF528!0.15!7.70!ZNF528;;chr19:22018966..22019001,-!p1@ZNF43!0.15!6.63!ZNF43;;chr19:21106049..21106072,+!p1@ZNF85!0.15!6.27!ZNF85;;chr1:33005020..33005077,+!p1@ZBTB8A!0.15!6.27!ZBTB8A;;chr17:16472486..16472533,-!p1@ZNF287!0.15!5.55!ZNF287;;chr14:89029336..89029363,+!p2@ZC3H14!0.15!4.30!ZC3H14;;chr1:149871114..149871134,+!p3@BOLA1!0.15!4.30!BOLA1;;chr16:73092898..73092931,-!p1@ZFHX3!0.15!4.12!ZFHX3;;chr19:12405645..12405685,-!p1@ZNF44!0.15!3.76!ZNF44;;chr17:46125685..46125699,+!p3@NFE2L1!0.15!3.58!NFE2L1;;chr9:73029219..73029289,-!p2@KLF9!0.15!3.04!KLF9;;chr19:36134528..36134563,+!p1@ETV2!0.15!2.86!ETV2;;chr19:36705617..36705644,+!p4@ZNF146!0.15!2.86!ZNF146;;chr8:145669791..145669834,-!p1@TONSL!0.15!2.86!TONSL;;chr5:43121653..43121678,+!p3@ZNF131!0.15!2.69!ZNF131;;chr8:116681409..116681431,-!p2@TRPS1!0.15!2.69!TRPS1;;chr1:161736125..161736136,+!p5@ATF6!0.15!2.51!ATF6;;chr19:56904880..56904919,-!p1@ZNF582!0.15!2.33!ZNF582;;chr1:33721900..33721921,+!p2@ZNF362!0.15!2.33!ZNF362;;chr15:60884747..60884774,-!p3@RORA!0.15!2.33!RORA;;chr14:61191018..61191048,-!p1@SIX4!0.15!1.97!SIX4;;chr1:61547781..61547809,+!p5@NFIA!0.15!1.79!NFIA;;chr19:57702832..57702844,+!p2@ZNF264!0.15!1.61!ZNF264;;chr3:52001396..52001425,-!p4@PCBP4!0.15!1.43!PCBP4;;chr8:28243813..28243839,-!p4@ZNF395!0.15!1.43!ZNF395;;chr19:54024251..54024305,+!p4@ZNF331!0.15!1.25!ZNF331;;chr3:107244229..107244254,+!p3@BBX!0.15!1.25!BBX;;chr19:57999082..57999095,+!p2@ZNF419!0.15!1.07!ZNF419;;chr19:49864746..49864780,-!p2@TEAD2!0.15!0.90!TEAD2;;chr19:11750566..11750627,+!p1@ZNF833P!0.15!0.90!ZNF833P;;chrX:84498989..84499003,+!p1@ZNF711!0.15!0.90!ZNF711;;chrX:129402754..129402766,-!p3@ZNF280C!0.15!0.90!ZNF280C;;chr2:176033027..176033050,-!p3@ATF2!0.15!0.90!ATF2;;chr2:66662895..66662907,+!p3@MEIS1!0.15!0.72!MEIS1;;chr3:141868230..141868250,-!p6@TFDP2!0.15!0.72!TFDP2;;chr3:5021026..5021035,+!p5@BHLHE40!0.15!0.72!BHLHE40;;chr19:44764031..44764072,+!p1@ZNF233!0.15!0.72!ZNF233;;chr1:43148716..43148756,+!p6@YBX1!0.15!0.72!YBX1;;chr9:73028462..73028491,-!p8@KLF9!0.15!0.72!KLF9;;chr3:71179785..71179810,-!p23@FOXP1!0.15!0.54!FOXP1;;chr7:100076744..100076749,-!p8@TSC22D4!0.15!0.54!TSC22D4;;chr16:69419724..69419735,-!p4@TERF2!0.15!0.54!TERF2;;chr19:20748620..20748630,-!p3@ZNF737!0.15!0.54!ZNF737;;chr1:78445097..78445110,-!p7@FUBP1!0.15!0.54!FUBP1;;chr13:27998720..27998826,+!p1@GTF3A!0.14!119.08!GTF3A;;chr2:74374995..74375055,-!p1@BOLA3!0.14!54.79!BOLA3;;chr5:132299290..132299310,-!p2@AFF4!0.14!23.82!AFF4;;chr5:16465869..16465891,-!p2@ZNF622!0.14!16.65!ZNF622;;chr12:95467359..95467417,-!p2@NR2C1!0.14!15.76!NR2C1;;chr22:38598086..38598105,+!p1@MAFF!0.14!12.71!MAFF;;chr11:13299319..13299424,+!p1@ARNTL!0.14!12.00!ARNTL;;chr3:141868293..141868355,-!p2@TFDP2!0.14!10.21!TFDP2;;chr19:37019136..37019178,-!p1@ZNF260!0.14!9.49!ZNF260;;chr12:51157744..51157796,+!p2@ATF1!0.14!7.88!ATF1;;chr13:41240717..41240735,-!p2@FOXO1!0.14!7.70!FOXO1;;chr10:63809013..63809041,+!p3@ARID5B!0.14!6.27!ARID5B;;chr3:44596679..44596726,+!p1@ZNF167!0.14!4.66!ZNF167;;chr17:5095126..5095169,-!p1@ZNF594!0.14!4.48!ZNF594;;chr19:44617538..44617598,+!p1@ZNF225!0.14!4.12!ZNF225;;chr9:73028332..73028385,-!p3@KLF9!0.14!3.58!KLF9;;chr20:306051..306096,+!p3@SOX12!0.14!2.51!SOX12;;chr18:3451646..3451691,+!p3@TGIF1!0.14!2.51!TGIF1;;chr6:45389791..45389832,+!p3@RUNX2!0.14!2.33!RUNX2;;chr6:12012536..12012554,+!p4@HIVEP1!0.14!2.15!HIVEP1;;chr8:146228226..146228264,-!p2@ZNF252!0.14!2.15!ZNF252P;;chr2:187350951..187350962,+!p2@ZC3H15!0.14!2.15!ZC3H15;;chr6:7108855..7108903,+!p5@RREB1!0.14!1.97!RREB1;;chr7:99156393..99156433,+!p6@ZNF655!0.14!1.97!ZNF655;;chr15:61521417..61521460,-!p2@RORA!0.14!1.97!RORA;;
+|ffid_belonging_in_development=CL:0000355,CL:0000222,CL:0000515
 |fonse_cell_line=
 |fonse_cell_line_closure=

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FF:11398-118D3: Difference between revisions

From FANTOM5_SSTAR

Revision as of 20:54, 9 July 2012

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	Mozilla Cavendish skin modified by DaSch for the Web Community Wiki GitHub project page – Report a bug – Skin version: 2.6.0