FF:11435-118H4: Difference between revisions

Revision as of 21:03, 9 July 2012

Name:	Smooth Muscle Cells - Coronary Artery, donor3
Species:	Human (Homo sapiens)
Library ID:	{{{library_id}}}
Sample type:	{{{sample_category}}}
Genomic View:	UCSC
CAGEd-oPOSSUM:	link

Additional information

Sample information

strain	NA
tissue	coronary artery
dev stage	39 years old adult
sex	male
age	39
cell type	smooth muscle cell
cell line	NA
company	Cell Applications
collaboration	FANTOM5 OSC CORE (contact: Al Forrest)
External link for information	[{{{sample_info_link}}} {{{sample_info_link}}}]

RNA information

lot number	1401
catalog number	CA350-R10a
sample type	total RNA
extraction protocol (Details)	OP-RNA-extraction-totalRNA-TRIzol-isopropanol-v1.0

Download raw sequence, BAM & CTSS

Hg19

BAM	CTSS
[{{{hg19bam}}} download]	[{{{hg19ctss}}} donwload]

Hg38

BAM	CTSS
[{{{hg38bam}}} download]	[{{{hg38ctss}}} donwload]

Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.

Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. Analyst:NA link to dataset. data

Coexpression cluster	score
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral	0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate	0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural	0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial	0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel	0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS	0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils	0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural	0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis	-0.156
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy	0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood	0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate	0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma	-0.0424
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial	0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic	0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat	0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal	0
C113-thyroid-throat-lung-lymph-small-colon-trachea	0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma	0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus	0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea	0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal	0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula	0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD19	0
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils	0
C120-immature-salivary-tongue-skin-cervical-CD14-CD34	0
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B	0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal	0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils	0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte	0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus	0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain	0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil	0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP	0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small	0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD4	0
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar	0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin	0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived	0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma	0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis	0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum	0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal	0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic	0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal	0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal	0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen	0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen	0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B	0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair	0.355
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast	0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis	0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal	0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell	0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral	0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal	0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum	0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue	0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small	0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast	0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung	0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular	0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate	0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid	0
C156-plasma-splenic-hereditary-B-large-xeroderma-b	0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea	0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen	0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal	0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain	0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral	0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta	0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon	0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal	0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma	0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial	0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung	0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD4	0
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral	0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma	0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage	0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet	0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye	0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes	0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose	0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils	0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural	-0.0388
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19	-0.301
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous	0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus	0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil	0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood	0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle	-0.467
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar	0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute	0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt	0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid	0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis	0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid	0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage	0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat	0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen	0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma	0
C190-colon-small-rectum-duodenum-appendix-temporal-oral	0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic	0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD4	0
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD14	0
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar	0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal	0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial	0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival	0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes	0.355
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma	0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast	0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat	0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed	0.154
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall	0
C202-salivary-skin-penis-tongue-uterus-cervical-immature	0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic	0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD34	0
C205-mycosis-cord-hairy-xeroderma-CD4-B-b	0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary	0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte	0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous	0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen	0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic	0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil	0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney	0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD34	0
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral	0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain	0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature	0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD34	0
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital	0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary	0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum	0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD19	0
C220-Adipocyte-mature-left-breast-skin-liver-adipose	0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular	0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte	0.189
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte	0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal	0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal	0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal	0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue	0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult	0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart	0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD14	0
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung	0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis	0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum	0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF7	0
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma	0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas	0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma	0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial	0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell	0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy	0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral	0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal	0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus	0.108
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach	0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing	0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage	0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic	0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory	0
C247-pons-locus-medulla-spinal-paracentral-medial-occipital	0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast	0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial	0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall	0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD4	0
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue	0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma	0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum	0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris	0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast	0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla	0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral	0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric	0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing	0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole	0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood	0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal	0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms	0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil	0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute	0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD8	-0.00613
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast	0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear	0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate	0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD4	0
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung	0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth	0
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum	0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil	0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast	0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte	0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal	0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal	0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma	0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory	0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial	0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic	0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD4	0
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small	0.0228
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat	0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular	0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus	0
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic	0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial	0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal	0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal	0.153
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left	0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart	0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature	0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea	0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal	0.153
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD34	0
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral	0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte	0.811
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed	0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral	0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital	0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood	0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala	0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal	0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils	0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic	1.029
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid	0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole	0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus	0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea	0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory	0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen	0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile	0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula	0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt	0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea	0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms	0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD133	0
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus	0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small	0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal	0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon	0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder	0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature	0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS	0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel	0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix	0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus	0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma	0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas	0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma	0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas	0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma	0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary	0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature	0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma	0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue	0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural	0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H9	0
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic	0.355
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature	0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical	0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b	0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph	0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute	0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic	0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils	0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus	0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung	0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma	0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK	0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast	0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue	0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate	0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left	0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal	0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy	0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral	0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell	0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD8	0
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea	0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal	0.265
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD34	0
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast	0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid	0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD34	0
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic	0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon	0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma	0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma	0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic	0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived	0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic	0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left	0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen	0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair	0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole	0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular	0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma	0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid	0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix	0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain	0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole	0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid	0

Repeat families with enriched expression in this sampleSummary:Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed. Analyst:NA link to dataset. data no result for this sample

TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifsSummary:Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression Analyst: Michiel de Hoon link to dataset. data

library id: CNhs12045

Jaspar motif	Logo	P-value
MA0002.2	MA0002.2	0.975
MA0003.1	MA0003.1	0.247
MA0004.1	MA0004.1	0.761
MA0006.1	MA0006.1	0.183
MA0007.1	MA0007.1	0.224
MA0009.1	MA0009.1	0.834
MA0014.1	MA0014.1	0.808
MA0017.1	MA0017.1	0.554
MA0018.2	MA0018.2	0.00127
MA0019.1	MA0019.1	0.244
MA0024.1	MA0024.1	0.00279
MA0025.1	MA0025.1	0.4
MA0027.1	MA0027.1	0.783
MA0028.1	MA0028.1	0.316
MA0029.1	MA0029.1	0.312
MA0030.1	MA0030.1	0.0443
MA0031.1	MA0031.1	0.00303
MA0035.2	MA0035.2	0.935
MA0038.1	MA0038.1	0.12
MA0039.2	MA0039.2	0.886
MA0040.1	MA0040.1	0.358
MA0041.1	MA0041.1	0.288
MA0042.1	MA0042.1	0.871
MA0043.1	MA0043.1	0.0581
MA0046.1	MA0046.1	0.962
MA0047.2	MA0047.2	0.523
MA0048.1	MA0048.1	0.488
MA0050.1	MA0050.1	1.23608e-5
MA0051.1	MA0051.1	0.0351
MA0052.1	MA0052.1	0.0466
MA0055.1	MA0055.1	0.118
MA0057.1	MA0057.1	0.496
MA0058.1	MA0058.1	0.427
MA0059.1	MA0059.1	0.445
MA0060.1	MA0060.1	0.00327
MA0061.1	MA0061.1	0.437
MA0062.2	MA0062.2	0.941
MA0065.2	MA0065.2	0.32
MA0066.1	MA0066.1	0.338
MA0067.1	MA0067.1	0.0205
MA0068.1	MA0068.1	0.904
MA0069.1	MA0069.1	0.528
MA0070.1	MA0070.1	0.763
MA0071.1	MA0071.1	0.568
MA0072.1	MA0072.1	0.551
MA0073.1	MA0073.1	0.693
MA0074.1	MA0074.1	0.0922
MA0076.1	MA0076.1	0.66
MA0077.1	MA0077.1	0.198
MA0078.1	MA0078.1	0.0644
MA0079.2	MA0079.2	0.492
MA0080.2	MA0080.2	0.00101
MA0081.1	MA0081.1	0.5
MA0083.1	MA0083.1	0.024
MA0084.1	MA0084.1	0.181
MA0087.1	MA0087.1	0.31
MA0088.1	MA0088.1	0.41
MA0090.1	MA0090.1	0.0185
MA0091.1	MA0091.1	0.108
MA0092.1	MA0092.1	0.101
MA0093.1	MA0093.1	0.787
MA0099.2	MA0099.2	4.76626e-7
MA0100.1	MA0100.1	0.148
MA0101.1	MA0101.1	0.441
MA0102.2	MA0102.2	0.2
MA0103.1	MA0103.1	0.163
MA0104.2	MA0104.2	0.384
MA0105.1	MA0105.1	0.366
MA0106.1	MA0106.1	0.0295
MA0107.1	MA0107.1	0.435
MA0108.2	MA0108.2	0.0235
MA0111.1	MA0111.1	0.0716
MA0112.2	MA0112.2	0.0363
MA0113.1	MA0113.1	0.27
MA0114.1	MA0114.1	0.737
MA0115.1	MA0115.1	0.424
MA0116.1	MA0116.1	0.836
MA0117.1	MA0117.1	0.315
MA0119.1	MA0119.1	0.293
MA0122.1	MA0122.1	0.969
MA0124.1	MA0124.1	0.256
MA0125.1	MA0125.1	0.245
MA0131.1	MA0131.1	0.348
MA0135.1	MA0135.1	0.938
MA0136.1	MA0136.1	0.00739
MA0137.2	MA0137.2	0.227
MA0138.2	MA0138.2	0.878
MA0139.1	MA0139.1	0.967
MA0140.1	MA0140.1	0.83
MA0141.1	MA0141.1	0.164
MA0142.1	MA0142.1	0.362
MA0143.1	MA0143.1	0.673
MA0144.1	MA0144.1	0.893
MA0145.1	MA0145.1	0.161
MA0146.1	MA0146.1	0.34
MA0147.1	MA0147.1	0.703
MA0148.1	MA0148.1	0.605
MA0149.1	MA0149.1	0.798
MA0150.1	MA0150.1	0.323
MA0152.1	MA0152.1	0.243
MA0153.1	MA0153.1	0.667
MA0154.1	MA0154.1	0.292
MA0155.1	MA0155.1	0.0193
MA0156.1	MA0156.1	0.696
MA0157.1	MA0157.1	0.109
MA0159.1	MA0159.1	0.414
MA0160.1	MA0160.1	0.945
MA0162.1	MA0162.1	0.0118
MA0163.1	MA0163.1	0.0503
MA0164.1	MA0164.1	0.586
MA0258.1	MA0258.1	0.222
MA0259.1	MA0259.1	0.504

FANTOM5 phase1 novel unique motifsSummary:Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above Analyst: Michiel de Hoon link to dataset. data

library id: CNhs12045

Novel motif	Logo	P-value
1	1	0.833
10	10	0.211
100	100	0.816
101	101	0.197
102	102	0.987
103	103	0.143
104	104	0.515
105	105	0.487
106	106	0.351
107	107	0.0804
108	108	0.28
109	109	0.0696
11	11	0.116
110	110	0.21
111	111	0.339
112	112	0.783
113	113	0.0256
114	114	0.536
115	115	0.0817
116	116	0.039
117	117	0.807
118	118	0.714
119	119	0.159
12	12	0.905
120	120	0.0329
121	121	0.959
122	122	0.97
123	123	0.0186
124	124	0.334
125	125	0.709
126	126	0.699
127	127	0.719
128	128	0.283
129	129	0.704
13	13	0.648
130	130	0.239
131	131	0.791
132	132	0.867
133	133	0.417
134	134	0.238
135	135	0.11
136	136	0.152
137	137	0.632
138	138	0.511
139	139	0.397
14	14	0.755
140	140	0.668
141	141	0.713
142	142	0.426
143	143	0.00959
144	144	0.903
145	145	0.417
146	146	0.421
147	147	0.184
148	148	0.615
149	149	0.113
15	15	0.687
150	150	0.134
151	151	0.634
152	152	0.00995
153	153	0.249
154	154	0.418
155	155	0.117
156	156	0.962
157	157	0.407
158	158	0.0542
159	159	0.486
16	16	0.123
160	160	0.309
161	161	0.55
162	162	0.902
163	163	0.947
164	164	0.473
165	165	0.534
166	166	0.999
167	167	0.618
168	168	0.976
169	169	0.0828
17	17	0.128
18	18	0.0717
19	19	0.227
2	2	0.0874
20	20	0.365
21	21	0.967
22	22	0.192
23	23	0.12
24	24	0.279
25	25	0.388
26	26	0.214
27	27	0.454
28	28	0.267
29	29	0.481
3	3	0.58
30	30	0.216
31	31	0.587
32	32	2.0821e-5
33	33	0.891
34	34	0.194
35	35	0.842
36	36	0.289
37	37	0.095
38	38	0.653
39	39	0.552
4	4	0.825
40	40	0.541
41	41	0.283
42	42	0.98
43	43	0.517
44	44	0.161
45	45	0.297
46	46	0.258
47	47	0.588
48	48	0.38
49	49	0.97
5	5	0.924
50	50	0.607
51	51	0.73
52	52	0.901
53	53	0.367
54	54	0.686
55	55	0.325
56	56	0.886
57	57	0.942
58	58	0.4
59	59	0.0554
6	6	0.989
60	60	0.851
61	61	0.923
62	62	0.898
63	63	0.482
64	64	0.7
65	65	0.0655
66	66	0.856
67	67	0.429
68	68	0.383
69	69	0.647
7	7	0.879
70	70	0.658
71	71	0.878
72	72	0.728
73	73	0.00118
74	74	0.56
75	75	0.681
76	76	0.58
77	77	5.83809e-4
78	78	0.685
79	79	0.146
8	8	0.0824
80	80	0.875
81	81	0.852
82	82	0.762
83	83	0.927
84	84	0.804
85	85	0.246
86	86	0.599
87	87	0.00267
88	88	0.712
89	89	0.00258
9	9	0.246
90	90	0.619
91	91	0.832
92	92	0.307
93	93	0.0656
94	94	0.592
95	95	0.0241
96	96	0.653
97	97	0.41
98	98	0.715
99	99	0.0124

de novo motifs identified by HOMER in promoters active in this sampleSummary:The result of HOMER in this sample is shown. Analyst:NA library id: CNhs12045

FANTOM5 (FF) ontology

Direct parent terms

is_a relathionship
EFO:0002091 biological replicate
FF:0000172 human smooth muscle cell of coronary artery sample

Ancestor terms (non development)Summary:Connected ontology terms with is_a, part_of or located_in relationship Analyst: Hideya Kawaji link to source data data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000548 (animal cell)
0002371 (somatic cell)
0000393 (electrically responsive cell)
0000183 (contractile cell)
0000187 (muscle cell)
0000192 (smooth muscle cell)
0000211 (electrically active cell)
0000255 (eukaryotic cell)
0002494 (cardiocyte)
0000359 (vascular associated smooth muscle cell)
0002592 (smooth muscle cell of the coronary artery)

UBERON: Anatomy
0000468 (multi-cellular organism)
0007100 (primary circulatory organ)
0000948 (heart)
0001637 (artery)
0000483 (epithelium)
0000479 (tissue)
0000055 (vessel)
0010314 (structure with developmental contribution from neural crest)
0000062 (organ)
0004111 (anatomical conduit)
0004120 (mesoderm-derived structure)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0003914 (epithelial tube)
0000025 (tube)
0000477 (anatomical cluster)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0000119 (cell layer)
0003103 (compound organ)
0004573 (systemic artery)
0003498 (heart blood vessel)
0003509 (arterial blood vessel)
0007500 (epithelial tube open at both ends)
0001981 (blood vessel)
0002049 (vasculature)
0005985 (coronary vessel)
0010317 (germ layer / neural crest derived structure)
0007798 (vascular system)
0001621 (coronary artery)
0004535 (cardiovascular system)
0004571 (systemic arterial system)
0004572 (arterial system)
0004537 (blood vasculature)
0001009 (circulatory system)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000167 (smooth muscle cell sample)
0000172 (human smooth muscle cell of coronary artery sample)

Ancestor terms (development)Summary:Connected ontology terms with develops_from, derives_from or preceded_by relationship Analyst: Hideya Kawaji link to source data data
CL:0000355 (multi-potent skeletal muscle stem cell)
CL:0000222 (mesodermal cell)
CL:0000514 (smooth muscle myoblast)

@@ Line 10: / Line 10: @@
 |def=
 |expression_enrichment_score=chr8:55370487..55370503,+!p1@SOX17!2.16!144.49!SOX17;;chr6:134210243..134210257,+!p1@TCF21!1.72!51.39!TCF21;;chr20:6748325..6748352,+!p1@BMP2!1.42!35.81!BMP2;;chr17:1959369..1959388,+!p2@HIC1!1.36!57.29!HIC1;;chr8:11561684..11561751,+!p1@GATA4!1.34!20.64!GATA4;;chr11:34642612..34642646,+!p1@EHF!1.24!16.43!EHF;;chr11:65686802..65686818,+!p6@DRAP1!1.12!21.48!DRAP1;;chr16:86544113..86544145,+!p1@FOXF1!1.09!13.90!FOXF1;;chr15:83953397..83953425,-!p1@BNC1!1.08!12.64!BNC1;;chr18:19749541..19749557,+!p1@GATA6!1.03!30.75!GATA6;;chr1:170633348..170633399,+!p2@PRRX1!1.03!13.48!PRRX1;;chr7:1577899..1577943,+!p3@MAFK!1.03!9.69!MAFK;;chr18:19749386..19749404,+!p2@GATA6!1.00!13.06!GATA6;;chr19:42636586..42636607,-!p1@POU2F2!0.97!23.59!POU2F2;;chr7:19157248..19157268,-!p1@TWIST1!0.97!23.59!TWIST1;;chr7:35293685..35293718,-!p1@TBX20!0.97!8.43!TBX20;;chr1:37940170..37940190,+!p1@ZC3H12A!0.96!102.37!ZC3H12A;;chr11:46299199..46299233,+!p1@CREB3L1!0.96!42.97!CREB3L1;;chr10:94449703..94449718,+!p1@HHEX!0.96!32.02!HHEX;;chr11:65687362..65687436,+!p3@DRAP1!0.95!37.49!DRAP1;;chr2:239756739..239756755,+!p2@TWIST2!0.92!12.64!TWIST2;;chr1:170633262..170633285,+!p3@PRRX1!0.90!8.00!PRRX1;;chr12:124873357..124873401,-!p1@NCOR2!0.89!82.15!NCOR2;;chr7:19157043..19157088,-!p2@TWIST1!0.86!16.43!TWIST1;;chr5:72744594..72744609,-!p1@FOXD1!0.84!28.65!FOXD1;;chr16:31076332..31076388,-!p3@ZNF668!0.84!5.90!ZNF668;;chr17:3571863..3571881,-!p1@TAX1BP3!0.83!444.85!TAX1BP3;;chr1:170632959..170632987,+!p4@PRRX1!0.83!6.32!PRRX1;;chr1:151032782..151032801,+!p4@MLLT11!0.82!11.80!MLLT11;;chr8:72756637..72756664,-!p3@MSC!0.81!6.32!MSC;;chr17:1958388..1958404,+!p1@HIC1!0.80!36.23!HIC1;;chr11:65686732..65686756,+!p2@DRAP1!0.80!24.01!DRAP1;;chr8:106330656..106330684,+!p1@ZFPM2!0.80!14.74!ZFPM2;;chr5:72744445..72744466,-!p2@FOXD1!0.80!9.27!FOXD1;;chr2:239756671..239756732,+!p1@TWIST2!0.79!17.69!TWIST2;;chr17:59477233..59477263,+!p1@TBX2!0.79!17.27!TBX2;;chr17:46622440..46622477,-!p5@HOXB2!0.79!5.90!HOXB2;;chr4:174450089..174450153,-!p2@HAND2!0.78!5.06!HAND2;;chr6:34204921..34204939,+!p3@HMGA1!0.77!163.03!HMGA1;;chr8:72756063..72756125,-!p1@MSC!0.77!10.53!MSC;;chr12:66218836..66218888,+!p1@HMGA2!0.76!49.29!HMGA2;;chr11:46299539..46299620,+!p2@CREB3L1!0.76!8.43!CREB3L1;;chr1:151032860..151032918,+!p1@MLLT11!0.75!60.24!MLLT11;;chr10:131762504..131762555,-!p1@EBF3!0.75!4.63!EBF3;;chr4:174451370..174451387,-!p1@HAND2!0.75!4.63!HAND2;;chr15:67458491..67458505,+!p18@SMAD3!0.75!4.63!SMAD3;;chrY:2803415..2803468,+!p1@ZFY!0.75!4.63!ZFY;;chr21:36260773..36260804,-!p7@RUNX1!0.74!6.32!RUNX1;;chr10:8096772..8096787,+!p2@GATA3!0.74!5.48!GATA3;;chr3:141087393..141087426,+!p3@ZBTB38!0.73!19.38!ZBTB38;;chr20:50721803..50721857,-!p2@ZFP64!0.73!7.16!ZFP64;;chr1:170632285..170632309,+!p1@PRRX1!0.73!5.06!PRRX1;;chr12:66218923..66218934,+!p14@HMGA2!0.72!4.21!HMGA2;;chr8:72756267..72756296,-!p4@MSC!0.71!6.32!MSC;;chr11:65687222..65687240,+!p7@DRAP1!0.71!5.48!DRAP1;;chr20:42543441..42543497,+!p1@TOX2!0.69!19.80!TOX2;;chr8:72756667..72756736,-!p2@MSC!0.68!6.32!MSC;;chr21:38071430..38071456,+!p1@SIM2!0.68!3.79!SIM2;;chr3:25469815..25469866,+!p3@RARB!0.68!3.79!RARB;;chr3:25470156..25470227,+!p2@RARB!0.68!3.79!RARB;;chr11:125034640..125034655,+!p1@PKNOX2!0.68!3.79!PKNOX2;;chr14:62162258..62162269,+!p2@HIF1A!0.66!39.60!HIF1A;;chr12:66218598..66218645,+!p2@HMGA2!0.66!18.96!HMGA2;;chr5:174151553..174151610,+!p1@MSX2!0.66!6.32!MSX2;;chr11:65687158..65687216,+!p4@DRAP1!0.65!23.17!DRAP1;;chr14:62162285..62162296,+!p3@HIF1A!0.65!21.06!HIF1A;;chr20:42543506..42543549,+!p2@TOX2!0.65!9.27!TOX2;;chr17:46622229..46622257,-!p6@HOXB2!0.65!4.21!HOXB2;;chr3:157823517..157823562,-!p1@SHOX2!0.65!3.79!SHOX2;;chr17:3571887..3571918,-!p2@TAX1BP3!0.64!43.81!TAX1BP3;;chr15:67418119..67418162,+!p5@SMAD3!0.64!3.79!SMAD3;;chr2:113994526..113994556,-!p3@PAX8!0.64!3.37!PAX8;;chr10:35484053..35484076,+!p1@CREM!0.63!9.27!CREM;;chr9:35732647..35732678,+!p2@CREB3!0.62!20.64!CREB3;;chr7:44143925..44143970,+!p1@AEBP1!0.60!81.30!AEBP1;;chr12:27485762..27485776,+!p3@ARNTL2!0.60!9.27!ARNTL2;;chr2:200322654..200322707,-!p2@SATB2!0.60!4.63!SATB2;;chr11:46299186..46299195,+!p3@CREB3L1!0.60!3.37!CREB3L1;;chr2:102091144..102091183,-!p2@RFX8!0.60!2.95!RFX8;;chr2:119604456..119604501,-!p2@EN1!0.60!2.95!EN1;;chr8:40755333..40755352,-!p1@ZMAT4!0.60!2.95!ZMAT4;;chr8:55370720..55370733,+!p2@SOX17!0.60!2.95!SOX17;;chr9:16705069..16705086,-!p3@BNC2!0.60!2.95!BNC2;;chrY:21906594..21906622,-!p1@KDM5D!0.60!2.95!KDM5D;;chr12:124873852..124873881,-!p3@NCOR2!0.59!21.06!NCOR2;;chr5:72744562..72744573,-!p3@FOXD1!0.59!3.79!FOXD1;;chr18:53068911..53068935,-!p4@TCF4!0.59!3.37!TCF4;;chr12:115121962..115121987,-!p1@TBX3!0.58!28.65!TBX3;;chr16:86600426..86600441,+!p1@FOXC2!0.58!8.00!FOXC2;;chr8:106330696..106330719,+!p2@ZFPM2!0.58!3.79!ZFPM2;;chr17:46622205..46622218,-!p3@HOXB2!0.58!3.37!HOXB2;;chr11:65686776..65686787,+!p9@DRAP1!0.57!3.37!DRAP1;;chr8:49833948..49833973,-!p2@SNAI2!0.56!20.64!SNAI2;;chr11:61520075..6152013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0.42!ZBTB47;;chr3:42695202..42695213,+!p6@ZBTB47!0.15!0.42!ZBTB47;;chr3:71180051..71180085,-!p21@FOXP1!0.15!0.42!FOXP1;;chr3:71294213..71294240,-!p30@FOXP1!0.15!0.42!FOXP1;;chr3:71630844..71630862,-!p40@FOXP1!0.15!0.42!FOXP1;;chr4:103422811..103422822,+!p11@NFKB1!0.15!0.42!NFKB1;;chr4:103423079..103423112,+!p4@NFKB1!0.15!0.42!NFKB1;;chr4:103423120..103423142,+!p8@NFKB1!0.15!0.42!NFKB1;;chr4:103516083..103516095,+!p23@NFKB1!0.15!0.42!NFKB1;;chr4:174451350..174451363,-!p3@HAND2!0.15!0.42!HAND2;;chr4:26323764..26323821,+!p15@RBPJ!0.15!0.42!RBPJ;;chr4:26324474..26324501,+!p16@RBPJ!0.15!0.42!RBPJ;;chr4:299227..299272,-!p1@ZNF732!0.15!0.42!ZNF732;;chr4:81105065..81105089,+!p8@PRDM8!0.15!0.42!PRDM8;;chrX:118739782..118739829,-!p2@NKRF!0.15!0.42!NKRF;;chrX:66765139..66765146,+!p5@AR!0.15!0.42!AR;;chr9:139094988..139095012,-!p1@LHX3!0.15!0.42!LHX3;;chr9:16728161..16728185,-!p4@BNC2!0.15!0.42!BNC2;;chrX:102000987..102001029,+!p3@BHLHB9!0.15!0.42!BHLHB9;;chrX:129244430..129244442,-!p5@ELF4!0.15!0.42!ELF4;;chr9:73028447..73028458,-!p13@KLF9!0.15!0.42!KLF9;;chr9:16727978..16728010,-!p6@BNC2!0.15!0.42!BNC2;;chr9:16727949..16727965,-!p14@BNC2!0.15!0.42!BNC2;;chr9:2158487..2158498,+!p21@SMARCA2!0.15!0.42!SMARCA2;;chr10:104154415..104154434,+!p5@NFKB2!0.15!0.42!NFKB2;;chr10:131762558..131762569,-!p5@EBF3!0.15!0.42!EBF3;;chr10:135122906..135122921,+!p4@ZNF511!0.15!0.42!ZNF511;;chr10:31607335..31607354,+!p5@ZEB1!0.15!0.42!ZEB1;;chr10:35416172..35416184,+!p13@CREM!0.15!0.42!CREM;;chr10:35485013..35485034,+!p15@CREM!0.15!0.42!CREM;;chr10:3824646..3824677,-!p9@KLF6!0.15!0.42!KLF6;;chr10:63661004..63661019,+!p15@ARID5B!0.15!0.42!ARID5B;;chr10:64133934..64133954,+!p6@ZNF365!0.15!0.42!ZNF365;;chr10:98591737..98591748,+!p12@LCOR!0.15!0.42!LCOR;;chr11:125034586..125034604,+!p3@PKNOX2!0.15!0.42!PKNOX2;;chr11:12696102..12696113,+!p5@TEAD1!0.15!0.42!TEAD1;;chr11:128392258..128392264,-!p7@ETS1!0.15!0.42!ETS1;;chr11:128392265..128392267,-!p10@ETS1!0.15!0.42!ETS1;;chr11:32457185..32457193,-!p7@WT1!0.15!0.42!WT1;;chr11:32457194..32457200,-!p11@WT1!0.15!0.42!WT1;;chr11:34643638..34643667,+!p8@EHF!0.15!0.42!EHF;;chr11:46333934..46333963,+!p5@CREB3L1!0.15!0.42!CREB3L1;;chr11:46333979..46333991,+!p7@CREB3L1!0.15!0.42!CREB3L1;;chr11:47279491..47279502,+!p6@NR1H3!0.15!0.42!NR1H3;;chr11:62369084..62369093,-!p9@MTA2!0.15!0.42!MTA2;;chr11:64073314..64073351,+!p5@ESRRA!0.15!0.42!ESRRA;;chr11:64764402..64764413,-!p2@BATF2!0.15!0.42!BATF2;;chr11:65668011..65668020,-!p3@FOSL1!0.15!0.42!FOSL1;;chr11:85393886..85393913,-!p3@CREBZF!0.15!0.42!CREBZF;;chr12:10856697..10856712,-!p12@CSDA!0.15!0.42!CSDA;;chr12:10875823..10875827,-!p22@CSDA!0.15!0.42!CSDA;;chr12:114843607..114843621,-!p7@TBX5!0.15!0.42!TBX5;;chr12:115121802..115121814,-!p5@TBX3!0.15!0.42!TBX3;;chr12:115122303..115122314,-!p6@TBX3!0.15!0.42!TBX3;;chr12:115122318..115122331,-!p2@TBX3!0.15!0.42!TBX3;;chr12:122623097..122623101,+!p18@MLXIP!0.15!0.42!MLXIP;;chr12:124915257..124915277,-!p23@NCOR2!0.15!0.42!NCOR2;;chr12:26277994..26278001,-!p6@BHLHE41!0.15!0.42!BHLHE41;;chr12:51611583..51611612,-!p4@POU6F1!0.15!0.42!POU6F1;;chr12:53613935..53613947,-!p8@RARG!0.15!0.42!RARG;;chr12:56583362..56583369,-!p7@SMARCC2!0.15!0.42!SMARCC2;;chr12:57522813..57522825,-!p10@STAT6!0.15!0.42!STAT6;;chr12:57853634..57853662,+!p2@GLI1!0.15!0.42!GLI1;;chr12:57917037..57917052,+!p9@MBD6!0.15!0.42!MBD6;;chr12:66357214..66357233,+!p13@HMGA2!0.15!0.42!HMGA2;;chr12:66358080..66358094,+!p15@HMGA2!0.15!0.42!HMGA2;;chr12:80085120..80085156,-!p14@PAWR!0.15!0.42!PAWR;;chr12:85673977..85674015,+!p1@ALX1!0.15!0.42!ALX1;;chr14:29235961..29236008,+!p1@FOXG1!0.15!0.42!FOXG1;;chr14:35874296..35874308,-!p12@NFKBIA!0.15!0.42!NFKBIA;;chr14:55494125..55494134,-!p3@WDHD1!0.15!0.42!WDHD1;;chr14:61190359..61190385,-!p4@SIX4!0.15!0.42!SIX4;;chr14:61190754..61190776,-!p6@SIX4!0.15!0.42!SIX4;;chr14:69263043..69263069,-!p8@ZFP36L1!0.15!0.42!ZFP36L1;;chr5:124082525..124082536,-!p10@ZNF608!0.15!0.42!ZNF608;;chr5:142780237..142780261,-!p7@NR3C1!0.15!0.42!NR3C1;;chr5:158524625..158524669,-!p6@EBF1!0.15!0.42!EBF1;;chr5:174151612..174151633,+!p2@MSX2!0.15!0.42!MSX2;;chr5:174151648..174151659,+!p3@MSX2!0.15!0.42!MSX2;;chr5:1887052..1887065,-!p2@IRX4!0.15!0.42!IRX4;;chr5:2751762..2751784,-!p1@IRX2!0.15!0.42!IRX2;;chr5:72744336..72744359,-!p5@FOXD1!0.15!0.42!FOXD1;;chr5:88081308..88081333,-!p8@MEF2C!0.15!0.42!MEF2C;;chr6:126070748..126070768,+!p2@HEY2!0.15!0.42!HEY2;;chr6:152011654..152011682,+!p1@ESR1!0.15!0.42!ESR1;;chr6:152011695..152011709,+!p6@ESR1!0.15!0.42!ESR1;;chr6:1610178..1610190,+!p5@FOXC1!0.15!0.42!FOXC1;;chr6:21594206..21594221,+!p15@SOX4!0.15!0.42!SOX4;;chr6:34210478..34210481,+!p8@HMGA1!0.15!0.42!HMGA1;;chr6:45390137..45390148,+!p12@RUNX2!0.15!0.42!RUNX2;;chr7:108209901..108209913,-!p4@THAP5!0.15!0.42!THAP5;;chr7:108209925..108209941,-!p2@THAP5!0.15!0.42!THAP5;;chr7:115670804..115670825,-!p1@TFEC!0.15!0.42!TFEC;;chr7:137565269..137565282,-!p16@CREB3L2!0.15!0.42!CREB3L2;;chr7:14029004..14029017,-!p8@ETV1!0.15!0.42!ETV1;;chr7:14029034..14029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+|ffid_belonging_in_development=CL:0000355,CL:0000222,CL:0000514
 |fonse_cell_line=
 |fonse_cell_line_closure=

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FF:11435-118H4: Difference between revisions

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Revision as of 21:03, 9 July 2012

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	Mozilla Cavendish skin modified by DaSch for the Web Community Wiki GitHub project page – Report a bug – Skin version: 2.6.0