FF:11759-123H4: Difference between revisions

Revision as of 21:54, 9 July 2012

Name:	mesenchymal precursor cell - ovarian cancer right ovary, donor2
Species:	Human (Homo sapiens)
Library ID:	{{{library_id}}}
Sample type:	{{{sample_category}}}
Genomic View:	UCSC
CAGEd-oPOSSUM:	link

Additional information

Sample information

strain	NA
tissue	ovary
dev stage	NA
sex	NA
age	NA
cell type	mesenchymal precursor cell
cell line	NA
company	NA
collaboration	Claudio Schneider LNCIB
External link for information	[{{{sample_info_link}}} {{{sample_info_link}}}]

RNA information

lot number	NA
catalog number	NA
sample type	NA
extraction protocol (Details)	NA

Download raw sequence, BAM & CTSS

Hg19

BAM	CTSS
[{{{hg19bam}}} download]	[{{{hg19ctss}}} donwload]

Hg38

BAM	CTSS
[{{{hg38bam}}} download]	[{{{hg38ctss}}} donwload]

Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.

Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. Analyst:NA link to dataset. data

Coexpression cluster	score
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral	0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate	0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural	0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial	0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel	0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS	0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils	0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural	0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis	0.0529
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy	0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood	0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate	0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma	0.0213
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial	0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic	0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat	0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal	0
C113-thyroid-throat-lung-lymph-small-colon-trachea	0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma	0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus	0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea	0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal	0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula	0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD19	0
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils	0
C120-immature-salivary-tongue-skin-cervical-CD14-CD34	0
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B	0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal	0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils	0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte	0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus	0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain	0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil	0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP	0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small	0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD4	0
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar	0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin	0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived	0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma	0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis	0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum	0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal	0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic	0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal	0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal	0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen	0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen	0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B	0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair	0.32
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast	0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis	0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal	0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell	0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral	0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal	0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum	0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue	0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small	0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast	0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung	0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular	0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate	0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid	0
C156-plasma-splenic-hereditary-B-large-xeroderma-b	0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea	0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen	0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal	0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain	0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral	0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta	0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon	0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal	0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma	0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial	0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung	0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD4	0
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral	0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma	0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage	0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet	0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye	0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes	0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose	0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils	0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural	0
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19	-0.0699
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous	0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus	0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil	0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood	0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle	0.0426
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar	0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute	0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt	0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid	0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis	0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid	0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage	0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat	0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen	0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma	0
C190-colon-small-rectum-duodenum-appendix-temporal-oral	0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic	0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD4	0
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD14	0
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar	0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal	0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial	0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival	0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes	0.64
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma	0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast	0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat	0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed	-0.0459
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall	0
C202-salivary-skin-penis-tongue-uterus-cervical-immature	0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic	0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD34	0
C205-mycosis-cord-hairy-xeroderma-CD4-B-b	0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary	0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte	0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous	0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen	0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic	0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil	0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney	0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD34	0
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral	0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain	0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature	0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD34	0
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital	0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary	0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum	0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD19	0
C220-Adipocyte-mature-left-breast-skin-liver-adipose	0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular	0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte	0.0432
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte	0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal	0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal	0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal	0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue	0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult	0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart	0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD14	0
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung	0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis	0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum	0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF7	0
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma	0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas	0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma	0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial	0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell	0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy	0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral	0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal	0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus	-0.121
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach	0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing	0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage	0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic	0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory	0
C247-pons-locus-medulla-spinal-paracentral-medial-occipital	0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast	0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial	0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall	0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD4	0.0793
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue	0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma	0.259
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum	0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris	0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast	0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla	0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral	0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric	0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing	0.135
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole	0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood	0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal	0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms	0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil	0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute	0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD8	0
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast	0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear	0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate	0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD4	0.135
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung	0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth	0
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum	0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil	0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast	0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte	0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal	0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal	0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma	0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory	0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial	0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic	0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD4	0.0726
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small	-0.117
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat	0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular	0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus	0.0726
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic	0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial	0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal	0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal	0.135
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left	0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart	0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature	0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea	0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal	0.436
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD34	0
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral	0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte	0.45
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed	0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral	0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital	0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood	0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala	0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal	0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils	0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic	0.592
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid	0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole	0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus	0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea	0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory	0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen	0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile	0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula	0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt	0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea	0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms	0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD133	0
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus	0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small	0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal	0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon	0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder	0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature	0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS	0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel	0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix	0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus	0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma	0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas	0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma	0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas	0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma	0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary	0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature	0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma	0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue	0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural	0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H9	0
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic	0.509
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature	0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical	0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b	0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph	0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute	0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic	0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils	0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus	0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung	0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma	0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK	0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast	0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue	0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate	0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left	0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal	0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy	0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral	0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell	0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD8	0
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea	0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal	0.631
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD34	0
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast	0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid	0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD34	0
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic	0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon	0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma	0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma	0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic	0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived	0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic	0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left	0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen	0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair	0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole	0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular	0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma	0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid	0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix	0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain	0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole	0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid	0

Repeat families with enriched expression in this sampleSummary:Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed. Analyst:NA link to dataset. data no result for this sample

TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifsSummary:Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression Analyst: Michiel de Hoon link to dataset. data

library id: CNhs12375

Jaspar motif	Logo	P-value
MA0002.2	MA0002.2	0.887
MA0003.1	MA0003.1	0.929
MA0004.1	MA0004.1	0.9
MA0006.1	MA0006.1	0.492
MA0007.1	MA0007.1	0.367
MA0009.1	MA0009.1	0.454
MA0014.1	MA0014.1	0.597
MA0017.1	MA0017.1	0.37
MA0018.2	MA0018.2	0.0454
MA0019.1	MA0019.1	0.483
MA0024.1	MA0024.1	3.44312e-6
MA0025.1	MA0025.1	0.381
MA0027.1	MA0027.1	0.577
MA0028.1	MA0028.1	0.152
MA0029.1	MA0029.1	0.857
MA0030.1	MA0030.1	0.266
MA0031.1	MA0031.1	0.181
MA0035.2	MA0035.2	0.0155
MA0038.1	MA0038.1	0.0214
MA0039.2	MA0039.2	0.00129
MA0040.1	MA0040.1	0.559
MA0041.1	MA0041.1	0.819
MA0042.1	MA0042.1	0.667
MA0043.1	MA0043.1	0.0391
MA0046.1	MA0046.1	0.193
MA0047.2	MA0047.2	0.755
MA0048.1	MA0048.1	0.0921
MA0050.1	MA0050.1	0.0159
MA0051.1	MA0051.1	0.0688
MA0052.1	MA0052.1	0.977
MA0055.1	MA0055.1	0.512
MA0057.1	MA0057.1	0.779
MA0058.1	MA0058.1	0.961
MA0059.1	MA0059.1	0.734
MA0060.1	MA0060.1	2.05881e-9
MA0061.1	MA0061.1	0.0346
MA0062.2	MA0062.2	7.98147e-5
MA0065.2	MA0065.2	0.0134
MA0066.1	MA0066.1	0.562
MA0067.1	MA0067.1	0.734
MA0068.1	MA0068.1	0.0301
MA0069.1	MA0069.1	0.921
MA0070.1	MA0070.1	0.894
MA0071.1	MA0071.1	0.64
MA0072.1	MA0072.1	0.529
MA0073.1	MA0073.1	0.836
MA0074.1	MA0074.1	0.184
MA0076.1	MA0076.1	0.0334
MA0077.1	MA0077.1	0.442
MA0078.1	MA0078.1	0.765
MA0079.2	MA0079.2	0.0818
MA0080.2	MA0080.2	3.06691e-4
MA0081.1	MA0081.1	0.0265
MA0083.1	MA0083.1	4.0093e-9
MA0084.1	MA0084.1	0.0406
MA0087.1	MA0087.1	0.739
MA0088.1	MA0088.1	0.972
MA0090.1	MA0090.1	0.00163
MA0091.1	MA0091.1	0.267
MA0092.1	MA0092.1	0.669
MA0093.1	MA0093.1	0.672
MA0099.2	MA0099.2	2.11963e-16
MA0100.1	MA0100.1	0.699
MA0101.1	MA0101.1	0.00882
MA0102.2	MA0102.2	0.911
MA0103.1	MA0103.1	3.6134e-5
MA0104.2	MA0104.2	0.245
MA0105.1	MA0105.1	0.00523
MA0106.1	MA0106.1	0.175
MA0107.1	MA0107.1	0.00452
MA0108.2	MA0108.2	0.00117
MA0111.1	MA0111.1	0.465
MA0112.2	MA0112.2	0.0834
MA0113.1	MA0113.1	0.396
MA0114.1	MA0114.1	0.0292
MA0115.1	MA0115.1	0.0416
MA0116.1	MA0116.1	0.758
MA0117.1	MA0117.1	0.38
MA0119.1	MA0119.1	0.171
MA0122.1	MA0122.1	0.601
MA0124.1	MA0124.1	0.654
MA0125.1	MA0125.1	0.0668
MA0131.1	MA0131.1	0.768
MA0135.1	MA0135.1	0.109
MA0136.1	MA0136.1	2.24872e-4
MA0137.2	MA0137.2	0.535
MA0138.2	MA0138.2	0.699
MA0139.1	MA0139.1	0.685
MA0140.1	MA0140.1	0.115
MA0141.1	MA0141.1	0.817
MA0142.1	MA0142.1	0.297
MA0143.1	MA0143.1	0.828
MA0144.1	MA0144.1	0.598
MA0145.1	MA0145.1	0.992
MA0146.1	MA0146.1	0.183
MA0147.1	MA0147.1	0.386
MA0148.1	MA0148.1	0.818
MA0149.1	MA0149.1	0.926
MA0150.1	MA0150.1	0.00139
MA0152.1	MA0152.1	0.00143
MA0153.1	MA0153.1	0.606
MA0154.1	MA0154.1	0.406
MA0155.1	MA0155.1	0.416
MA0156.1	MA0156.1	0.0131
MA0157.1	MA0157.1	0.197
MA0159.1	MA0159.1	0.45
MA0160.1	MA0160.1	0.335
MA0162.1	MA0162.1	0.142
MA0163.1	MA0163.1	0.0691
MA0164.1	MA0164.1	0.675
MA0258.1	MA0258.1	0.815
MA0259.1	MA0259.1	0.831

FANTOM5 phase1 novel unique motifsSummary:Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above Analyst: Michiel de Hoon link to dataset. data

library id: CNhs12375

Novel motif	Logo	P-value
1	1	0.783
10	10	0.244
100	100	0.259
101	101	0.582
102	102	0.253
103	103	0.776
104	104	0.947
105	105	0.853
106	106	0.151
107	107	0.387
108	108	0.904
109	109	0.986
11	11	0.668
110	110	0.0534
111	111	0.316
112	112	0.539
113	113	0.00467
114	114	0.464
115	115	0.485
116	116	0.344
117	117	0.177
118	118	0.719
119	119	0.275
12	12	0.458
120	120	0.0814
121	121	0.876
122	122	0.0619
123	123	0.00372
124	124	0.458
125	125	0.99
126	126	0.695
127	127	0.984
128	128	0.408
129	129	0.573
13	13	0.446
130	130	0.421
131	131	0.0365
132	132	0.758
133	133	0.888
134	134	0.12
135	135	0.733
136	136	0.481
137	137	0.862
138	138	0.557
139	139	0.406
14	14	0.178
140	140	0.356
141	141	0.511
142	142	0.622
143	143	0.0352
144	144	0.618
145	145	0.546
146	146	0.581
147	147	0.0457
148	148	0.799
149	149	0.308
15	15	0.443
150	150	0.0517
151	151	0.487
152	152	0.192
153	153	0.825
154	154	0.82
155	155	0.00328
156	156	0.285
157	157	0.31
158	158	0.038
159	159	0.0929
16	16	0.0226
160	160	0.317
161	161	0.359
162	162	0.614
163	163	0.221
164	164	0.0798
165	165	0.928
166	166	0.438
167	167	0.942
168	168	0.794
169	169	0.455
17	17	0.286
18	18	0.0656
19	19	0.0928
2	2	0.596
20	20	0.809
21	21	0.891
22	22	0.716
23	23	0.0113
24	24	0.429
25	25	0.19
26	26	0.301
27	27	0.757
28	28	0.255
29	29	0.204
3	3	0.434
30	30	0.776
31	31	0.77
32	32	3.05195e-7
33	33	0.863
34	34	0.903
35	35	0.208
36	36	0.108
37	37	0.072
38	38	0.734
39	39	0.383
4	4	0.499
40	40	0.145
41	41	0.816
42	42	0.981
43	43	0.656
44	44	0.33
45	45	0.54
46	46	0.328
47	47	0.515
48	48	0.644
49	49	0.221
5	5	0.306
50	50	0.446
51	51	0.899
52	52	0.835
53	53	0.125
54	54	0.977
55	55	0.184
56	56	0.512
57	57	0.955
58	58	0.217
59	59	0.768
6	6	0.321
60	60	0.57
61	61	0.894
62	62	0.969
63	63	0.715
64	64	0.856
65	65	0.358
66	66	0.132
67	67	0.508
68	68	0.891
69	69	0.386
7	7	0.31
70	70	0.874
71	71	0.413
72	72	0.77
73	73	0.0801
74	74	0.0477
75	75	0.463
76	76	0.537
77	77	0.0243
78	78	0.255
79	79	0.0596
8	8	0.676
80	80	0.767
81	81	0.545
82	82	0.777
83	83	0.872
84	84	0.915
85	85	0.0367
86	86	0.201
87	87	0.311
88	88	0.714
89	89	0.214
9	9	0.308
90	90	0.675
91	91	0.924
92	92	0.528
93	93	0.938
94	94	0.666
95	95	0.464
96	96	0.481
97	97	0.0971
98	98	0.0992
99	99	0.327

de novo motifs identified by HOMER in promoters active in this sampleSummary:The result of HOMER in this sample is shown. Analyst:NA library id: CNhs12375

FANTOM5 (FF) ontology

Direct parent terms

is_a relathionship
EFO:0002091 biological replicate
FF:0000275 human mesenchymal precursor cell- ovarian cancer-right ovary sample

Ancestor terms (non development)Summary:Connected ontology terms with is_a, part_of or located_in relationship Analyst: Hideya Kawaji link to source data data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000723 (somatic stem cell)
0000048 (multi fate stem cell)
0000548 (animal cell)
0002320 (connective tissue cell)
0002371 (somatic cell)
0000219 (motile cell)
0000134 (mesenchymal cell)
0000255 (eukaryotic cell)
0000034 (stem cell)

DOID: Disease
4 (disease)
0050686 (organ system cancer)
162 (cancer)
14566 (disease of cellular proliferation)
193 (reproductive organ cancer)
2394 (ovarian cancer)
120 (female reproductive organ cancer)

UBERON: Anatomy
0000468 (multi-cellular organism)
0000992 (female gonad)
0000991 (gonad)
0002384 (connective tissue)
0003134 (female reproductive organ)
0000479 (tissue)
0005156 (reproductive structure)
0000466 (immaterial anatomical entity)
0000062 (organ)
0004120 (mesoderm-derived structure)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000990 (reproductive system)
0002553 (anatomical cavity)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0003133 (reproductive organ)
0002323 (body cavity)
0000464 (anatomical space)
0004458 (body cavity or lining)
0010317 (germ layer / neural crest derived structure)
0002118 (right ovary)
0003100 (female organism)
0000474 (female reproductive system)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000272 (human ovarian cancer mesenchymal precursor cell sample)
0000275 (human mesenchymal precursor cell- ovarian cancer-right ovary sample)

Ancestor terms (development)Summary:Connected ontology terms with develops_from, derives_from or preceded_by relationship Analyst: Hideya Kawaji link to source data data
CL:0000134 (mesenchymal cell)

@@ Line 10: / Line 10: @@
 |def=
 |expression_enrichment_score=chr2:19558373..19558392,-!p1@OSR1!1.41!65.83!OSR1;;chr20:50179368..50179392,-!p2@NFATC2!1.39!30.37!NFATC2;;chrX:2418949..2419024,-!p1@DHRSX,p1@ZBED1!1.36!22.00!ZBED1;;chr19:45971246..45971265,+!p1@FOSB!1.34!377.15!FOSB;;chr12:66218598..66218645,+!p2@HMGA2!1.29!82.92!HMGA2;;chr1:170632285..170632309,+!p1@PRRX1!1.28!20.37!PRRX1;;chr8:55370487..55370503,+!p1@SOX17!1.28!18.18!SOX17;;chr11:34642612..34642646,+!p1@EHF!1.24!16.55!EHF;;chr21:36260773..36260804,-!p7@RUNX1!1.21!20.73!RUNX1;;chr19:46801639..46801699,+!p1@HIF3A!1.20!14.73!HIF3A;;chr8:11561684..11561751,+!p1@GATA4!1.19!14.37!GATA4;;chr12:52445218..52445237,+!p1@NR4A1!1.16!169.85!NR4A1;;chr12:66218255..66218304,+!p3@HMGA2!1.15!35.10!HMGA2;;chr12:54410664..54410684,+!p1@HOXC4,p1@HOXC5,p1@HOXC6!1.13!12.37!HOXC5;;chr11:46299199..46299233,+!p1@CREB3L1!1.12!62.56!CREB3L1;;chr3:141087393..141087426,+!p3@ZBTB38!1.11!47.64!ZBTB38;;chr8:49833948..49833973,-!p2@SNAI2!1.10!73.47!SNAI2;;chr8:72756267..72756296,-!p4@MSC!1.10!17.28!MSC;;chr19:42636586..42636607,-!p1@POU2F2!1.08!30.91!POU2F2;;chr9:127269661..127269719,-!p1@NR5A1!1.08!10.91!NR5A1;;chr2:102091566..102091581,-!p1@RFX8!1.04!10.00!RFX8;;chr6:134210243..134210257,+!p1@TCF21!1.03!9.82!TCF21;;chr2:157189180..157189290,-!p1@NR4A2!1.01!48.74!NR4A2;;chr6:106534192..106534224,+!p1@PRDM1!0.99!25.10!PRDM1;;chr1:170633348..170633399,+!p2@PRRX1!0.99!12.18!PRRX1;;chr2:176994408..176994492,+!p1@HOXD8!0.99!8.73!HOXD8;;chr12:66218836..66218888,+!p1@HMGA2!0.96!77.47!HMGA2;;chr12:66218183..66218209,+!p4@HMGA2!0.95!15.46!HMGA2;;chr21:36260295..36260310,-!p3@RUNX1!0.95!13.09!RUNX1;;chr12:66218212..66218244,+!p5@HMGA2!0.95!11.82!HMGA2;;chr1:170632137..170632172,+!p10@PRRX1!0.95!7.82!PRRX1;;chr8:49833978..49833996,-!p1@SNAI2!0.93!162.21!SNAI2;;chr2:239756739..239756755,+!p2@TWIST2!0.93!13.27!TWIST2;;chr8:72756063..72756125,-!p1@MSC!0.92!15.09!MSC;;chr5:72744445..72744466,-!p2@FOXD1!0.89!11.46!FOXD1;;chr15:96869255..96869291,+!p6@NR2F2!0.88!12.37!NR2F2;;chr3:141087454..141087465,+!p19@ZBTB38!0.88!6.55!ZBTB38;;chr2:239756671..239756732,+!p1@TWIST2!0.87!21.82!TWIST2;;chr17:1959369..1959388,+!p2@HIC1!0.87!17.46!HIC1;;chr17:59477233..59477263,+!p1@TBX2!0.84!19.28!TBX2;;chr8:72756667..72756736,-!p2@MSC!0.84!9.64!MSC;;chr1:170632959..170632987,+!p4@PRRX1!0.84!6.55!PRRX1;;chr1:170633262..170633285,+!p3@PRRX1!0.83!6.73!PRRX1;;chr14:75745523..75745537,+!p1@FOS!0.82!722.48!FOS;;chr14:62162258..62162269,+!p2@HIF1A!0.82!57.83!HIF1A;;chr7:44143925..44143970,+!p1@AEBP1!0.81!132.93!AEBP1;;chr14:62162285..62162296,+!p3@HIF1A!0.81!30.91!HIF1A;;chr11:65686732..65686756,+!p2@DRAP1!0.81!24.55!DRAP1;;chr3:138665937..138665968,-!p1@FOXL2!0.81!5.46!FOXL2;;chr3:5021268..5021282,+!p4@BHLHE40!0.80!11.27!BHLHE40;;chr8:72756637..72756664,-!p3@MSC!0.80!6.18!MSC;;chr12:115121962..115121987,-!p1@TBX3!0.79!47.64!TBX3;;chr5:72744594..72744609,-!p1@FOXD1!0.79!25.64!FOXD1;;chr14:24837368..24837401,+!p1@NFATC4!0.78!12.55!NFATC4;;chr15:96869114..96869160,+!p11@NR2F2!0.78!7.09!NR2F2;;chr15:96869222..96869251,+!p18@NR2F2!0.77!5.82!NR2F2;;chr8:106330656..106330684,+!p1@ZFPM2!0.76!13.27!ZFPM2;;chr6:106534230..106534254,+!p2@PRDM1!0.76!12.91!PRDM1;;chr19:54058073..54058088,+!p1@ZNF331!0.76!4.73!ZNF331;;chr10:94449703..94449718,+!p1@HHEX!0.75!19.46!HHEX;;chr5:321810..321877,+!p1@AHRR!0.75!15.82!AHRR;;chr15:96874927..96874938,+!p8@NR2F2!0.74!10.37!NR2F2;;chr3:193853927..193853944,+!p1@HES1!0.73!159.84!HES1;;chr5:137804484..137804498,+!p2@EGR1!0.73!19.46!EGR1;;chr12:66218904..66218913,+!p11@HMGA2!0.73!4.36!HMGA2;;chr19:54041669..54041697,+!p2@ZNF331!0.73!4.36!ZNF331;;chr7:19157043..19157088,-!p2@TWIST1!0.72!11.64!TWIST1;;chr9:102584262..102584276,+!p1@NR4A3!0.72!10.18!NR4A3;;chr15:96874145..96874166,+!p7@NR2F2!0.72!8.73!NR2F2;;chr14:75746722..75746777,+!p2@FOS!0.72!5.64!FOS;;chr17:1958388..1958404,+!p1@HIC1!0.71!29.64!HIC1;;chr1:59249688..59249703,-!p3@JUN!0.71!28.00!JUN;;chr9:102584159..102584174,+!p2@NR4A3!0.71!8.00!NR4A3;;chr1:170632250..170632277,+!p7@PRRX1!0.71!4.18!PRRX1;;chr12:54410639..54410659,+!p2@HOXC4,p2@HOXC5,p2@HOXC6!0.71!4.18!HOXC5;;chr12:66218923..66218934,+!p14@HMGA2!0.71!4.18!HMGA2;;chr10:63809106..63809127,+!p1@ARID5B!0.69!59.83!ARID5B;;chr1:37940170..37940190,+!p1@ZC3H12A!0.69!55.10!ZC3H12A;;chr11:65686802..65686818,+!p6@DRAP1!0.69!7.27!DRAP1;;chr11:46299539..46299620,+!p2@CREB3L1!0.69!7.09!CREB3L1;;chr21:36260343..36260402,-!p6@RUNX1!0.69!6.73!RUNX1;;chr8:106330696..106330719,+!p2@ZFPM2!0.69!5.09!ZFPM2;;chr15:57511609..57511651,+!p2@TCF12!0.68!6.73!TCF12;;chr17:41739283..41739297,-!p1@MEOX1!0.68!3.82!MEOX1;;chr1:170632115..170632136,+!p9@PRRX1!0.68!3.82!PRRX1;;chr1:170632647..170632659,+!p17@PRRX1!0.68!3.82!PRRX1;;chr12:66218420..66218439,+!p12@HMGA2!0.68!3.82!HMGA2;;chr12:77459306..77459365,-!p1@E2F7!0.67!53.28!E2F7;;chr12:115122318..115122331,-!p2@TBX3!0.67!3.64!TBX3;;chr12:54402745..54402788,+!p1@HOXC8!0.67!3.64!HOXC8;;chr5:158526917..158526932,-!p1@EBF1!0.66!10.00!EBF1;;chr12:66218573..66218596,+!p7@HMGA2!0.66!5.64!HMGA2;;chr7:19157248..19157268,-!p1@TWIST1!0.65!10.91!TWIST1;;chr12:66218378..66218401,+!p6@HMGA2!0.65!5.82!HMGA2;;chr3:141121847..141121868,+!p5@ZBTB38!0.65!5.64!ZBTB38;;chr15:96869292..96869320,+!p15@NR2F2!0.65!5.27!NR2F2;;chr12:54447599..54447630,+!p3@HOXC4!0.65!4.36!HOXC4;;chr11:46299186..46299195,+!p3@CREB3L1!0.65!4.00!CREB3L1;;chr15:96869206..96869220,+!p21@NR2F2!0.65!3.46!NR2F2;;chr9:16705069..16705086,-!p3@BNC2!0.65!3.46!BNC2;;chr15:96874012..96874042,+!p2@NR2F2!0.64!35.46!NR2F2;;chr2:145275162..145275202,-!p2@ZEB2!0.64!23.28!ZEB2;;chr11:65687362..65687436,+!p3@DRAP1!0.64!17.64!DRAP1;;chr2:66662281..66662308,+!p1@MEIS1!0.64!13.46!MEIS1;;chr1:200379104..200379128,-!p2@ZNF281!0.64!9.27!ZNF281;;chr7:44143978..44143989,+!p2@AEBP1!0.64!6.73!AEBP1;;chr12:66218443..66218461,+!p8@HMGA2!0.64!4.55!HMGA2;;chr14:62162224..62162254,+!p1@HIF1A!0.63!563.37!HIF1A;;chr13:45010939..45011033,-!p1@TSC22D1!0.63!255.68!TSC22D1;;chr22:38598086..38598105,+!p1@MAFF!0.63!41.28!MAFF;;chr15:42749722..42749739,-!p2@ZFP106!0.63!6.36!ZFP106;;chr19:31840130..31840160,-!p2@TSHZ3!0.63!5.46!TSHZ3;;chr8:72756213..72756243,-!p5@MSC!0.63!4.36!MSC;;chr16:86544113..86544145,+!p1@FOXF1!0.63!4.18!FOXF1;;chr2:102091144..102091183,-!p2@RFX8!0.63!3.27!RFX8;;chr3:25469815..25469866,+!p3@RARB!0.63!3.27!RARB;;chr12:54447637..54447659,+!p4@HOXC4!0.63!3.27!HOXC4;;chr2:121493425..121493474,+!p1@GLI2!0.62!7.82!GLI2;;chr15:96874216..96874236,+!p13@NR2F2!0.62!5.27!NR2F2;;chr3:141105705..141105770,+!p4@ZBTB38!0.62!4.00!ZBTB38;;chr1:54204818..54204870,-!p@chr1:54204818..54204870,-!0.62!3.46!GLIS1;;chr12:54394309..54394336,+!p2@HOXC9!0.61!3.09!HOXC9;;chr12:54422217..54422239,+!p3@HOXC6!0.61!3.09!HOXC6;;chr11:65687158..65687216,+!p4@DRAP1!0.60!20.55!DRAP1;;chr9:35732647..35732678,+!p2@CREB3!0.59!19.46!CREB3;;chr11:128392273..128392308,-!p2@ETS1!0.59!14.55!ETS1;;chr12:80085061..80085119,-!p6@PAWR!0.59!5.09!PAWR;;chr11:125034605..125034636,+!p2@PKNOX2!0.59!2.91!PKNOX2;;chr12:66218469..66218477,+!p16@HMGA2!0.59!2.91!HMGA2;;chr3:141087562..141087594,+!p12@ZBTB38!0.59!2.91!ZBTB38;;chr1:170632723..170632739,+!p8@PRRX1!0.59!2.91!PRRX1;;chr18:3448455..3448480,+!p5@TGIF1!0.58!5.82!TGIF1;;chr2:121493492..121493537,+!p2@GLI2!0.58!5.09!GLI2;;chrX:66763856..66763896,+!p1@AR!0.58!4.36!AR;;chr7:28448995..28449011,+!p4@CREB5!0.58!4.18!CREB5;;chr17:59477275..59477286,+!p3@TBX2!0.58!4.00!TBX2;;chr7:44143997..44144008,+!p3@AEBP1!0.58!3.82!AEBP1;;chr2:66662895..66662907,+!p3@MEIS1!0.58!3.64!MEIS1;;chr1:151032860..151032918,+!p1@MLLT11!0.57!39.46!MLLT11;;chr17:41622765..41622821,-!p2@ETV4!0.57!4.55!ETV4;;chr14:62213827..62213853,+!p6@HIF1A!0.57!4.18!HIF1A;;chr12:115121770..115121781,-!p4@TBX3!0.57!2.73!TBX3;;chr12:80085120..80085156,-!p14@PAWR!0.57!2.73!PAWR;;chr21:36260325..36260341,-!p14@RUNX1!0.57!2.73!RUNX1;;chr7:42276787..42276815,-!p1@GLI3!0.56!8.37!GLI3;;chr12:26277817..26277863,-!p2@BHLHE41!0.56!3.82!BHLHE41;;chr14:62213758..62213774,+!p8@HIF1A!0.56!3.64!HIF1A;;chr3:101568349..101568365,+!p1@NFKBIZ!0.55!169.12!NFKBIZ;;chr1:120190786..120190915,-!p1@ZNF697!0.55!22.73!ZNF697;;chr13:74708029..74708077,-!p2@KLF12!0.55!8.73!KLF12;;chr21:36259445..36259519,-!p4@RUNX1!0.55!8.37!RUNX1;;chr2:200323414..200323455,-!p1@SATB2!0.55!6.36!SATB2;;chr14:62203595..62203676,+!p4@HIF1A!0.55!5.46!HIF1A;;chr2:200322654..200322707,-!p2@SATB2!0.55!4.00!SATB2;;chr3:25470156..25470227,+!p2@RARB!0.55!2.55!RARB;;chr19:45251395..45251432,+!p8@BCL3!0.55!2.55!BCL3;;chr1:170632051..170632081,+!p16@PRRX1!0.55!2.55!PRRX1;;chr1:170633058..170633084,+!p5@PRRX1!0.55!2.55!PRRX1;;chr11:125034640..125034655,+!p1@PKNOX2!0.55!2.55!PKNOX2;;chr8:72755987..72756002,-!p7@MSC!0.55!2.55!MSC;;chr15:96873984..96873999,+!p3@NR2F2!0.54!22.91!NR2F2;;chr12:26277956..26277980,-!p1@BHLHE41!0.54!10.73!BHLHE41;;chr11:61520075..61520136,+!p1@C11orf9!0.54!6.00!C11orf9;;chr1:151032739..151032748,+!p6@MLLT11!0.54!3.27!MLLT11;;chr9:16870710..16870763,-!p1@BNC2!0.53!4.73!BNC2;;chr17:20492136..20492165,+!p1@MEIS3P2!0.53!4.18!MEIS3P2;;chr8:72756380..72756427,-!p8@MSC!0.53!2.36!MSC;;chr3:141087339..141087387,+!p2@ZBTB38!0.52!30.19!ZBTB38;;chr1:157108130..157108173,-!p1@ETV3!0.52!21.09!ETV3;;chr3:71630980..71631110,-!p3@FOXP1!0.52!9.82!FOXP1;;chr6:15246200..15246214,+!p2@JARID2!0.52!7.82!JARID2;;chr3:5021191..5021202,+!p3@BHLHE40!0.52!7.46!BHLHE40;;chr7:137686763..137686784,-!p5@CREB3L2!0.52!4.55!CREB3L2;;chr17:41622925..41622976,-!p3@ETV4!0.52!3.82!ETV4;;chr15:96875041..96875052,+!p17@NR2F2!0.52!3.64!NR2F2;;chr15:96873921..96873946,+!p1@NR2F2!0.51!83.10!NR2F2;;chr10:63809134..63809145,+!p6@ARID5B!0.51!6.18!ARID5B;;chr9:94186085..94186096,-!p3@NFIL3!0.51!4.18!NFIL3;;chr12:66218003..66218018,+!p9@HMGA2!0.51!2.91!HMGA2;;chr5:137801160..137801176,+!p1@EGR1!0.50!284.78!EGR1;;chr6:19837592..19837621,+!p1@ID4!0.50!17.09!ID4;;chr18:19749541..19749557,+!p1@GATA6!0.50!8.37!GATA6;;chr15:96874244..96874259,+!p5@NR2F2!0.50!6.36!NR2F2;;chr15:37391271..37391376,-!p5@MEIS2!0.50!4.73!MEIS2;;chr17:41623009..41623053,-!p4@ETV4!0.50!4.00!ETV4;;chr12:2627792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+|ffid_belonging_in_development=CL:0000134
 |fonse_cell_line=
 |fonse_cell_line_closure=

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FF:11759-123H4: Difference between revisions - resource_browser

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FF:11759-123H4: Difference between revisions

From FANTOM5_SSTAR

Revision as of 21:54, 9 July 2012

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	Mozilla Cavendish skin modified by DaSch for the Web Community Wiki GitHub project page – Report a bug – Skin version: 2.6.0