FF:11403-118D8: Difference between revisions

Revision as of 15:12, 15 May 2017

Name:	Preadipocyte - omental, donor3
Species:	Human (Homo sapiens)
Library ID:	CNhs12013
Sample type:	primary cells
Genomic View:	UCSC
FANTOM CAT:	1, 2, 3, 4, 5, 6
CAGEd-oPOSSUM:	link

Additional information

Sample information

strain	NA
tissue	omentum
dev stage	34 years old adult
sex	male
age	34
cell type	preadipocyte
cell line	NA
company	Zenbio
collaboration	FANTOM5 OSC CORE (contact: Al Forrest)
External link for information	[{{{sample_info_link}}} {{{sample_info_link}}}]

RNA information

lot number	NA
catalog number	N/A
sample type	total RNA
extraction protocol (Details)	OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0

CAGE Accession numbers

Method		Sample accession id
CAGE		SAMD00005026

Library accession numbers

Library id		Method		Exp. accession id		Run accession id
CNhs12013		CAGE		DRX008411		DRR009283

Accession ID Hg19

Library id		BAM		CTSS
CNhs12013		DRZ000708		DRZ002093

Download raw sequence, BAM & CTSS

Hg19

BAM	CTSS
[{{{hg19bam}}} download]	[{{{hg19ctss}}} donwload]

Hg38

BAM	CTSS
[{{{hg38bam}}} download]	[{{{hg38ctss}}} donwload]

Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.

Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. Analyst:NA link to dataset. data

Coexpression cluster	score
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral	0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate	0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural	0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial	0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel	0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS	0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils	0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural	0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis	0.209
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy	0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood	0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate	0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma	-0.39
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial	0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic	0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat	0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal	0
C113-thyroid-throat-lung-lymph-small-colon-trachea	0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma	0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus	0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea	0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal	0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula	0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD19	0
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils	0
C120-immature-salivary-tongue-skin-cervical-CD14-CD34	0
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B	0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal	0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils	0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte	0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus	0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain	0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil	0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP	0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small	0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD4	0
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar	0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin	0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived	0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma	0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis	0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum	0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal	0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic	0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal	0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal	0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen	0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen	0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B	0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair	1.071
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast	0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis	0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal	0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell	0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral	0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal	0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum	0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue	0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small	0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast	0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung	0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular	0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate	0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid	0
C156-plasma-splenic-hereditary-B-large-xeroderma-b	0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea	0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen	0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal	0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain	0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral	0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta	0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon	0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal	0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma	0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial	0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung	0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD4	0
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral	0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma	0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage	0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet	0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye	0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes	0.0648
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose	0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils	0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural	0
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19	-0.121
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous	0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus	0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil	0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood	0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle	0.129
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar	0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute	0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt	0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid	0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis	0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid	0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage	0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat	0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen	0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma	0
C190-colon-small-rectum-duodenum-appendix-temporal-oral	0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic	0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD4	0
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD14	0
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar	0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal	0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial	0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival	0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes	0.328
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma	0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast	0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat	0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed	0.379
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall	0
C202-salivary-skin-penis-tongue-uterus-cervical-immature	0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic	0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD34	0
C205-mycosis-cord-hairy-xeroderma-CD4-B-b	0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary	0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte	0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous	0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen	0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic	0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil	0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney	0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD34	0
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral	0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain	0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature	0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD34	0
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital	0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary	0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum	0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD19	0
C220-Adipocyte-mature-left-breast-skin-liver-adipose	0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular	0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte	0.576
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte	0.171
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal	0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal	0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal	0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue	0.121
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult	0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart	0.0648
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD14	0
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung	0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis	0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum	0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF7	0
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma	0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas	0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma	0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial	0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell	0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy	0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral	0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal	0.442
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus	-0.959
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach	0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing	0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage	0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic	0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory	0
C247-pons-locus-medulla-spinal-paracentral-medial-occipital	0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast	0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial	0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall	0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD4	0.039
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue	0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma	0.533
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum	0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris	0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast	0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla	0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral	0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric	0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing	0.881
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole	0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood	0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal	0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms	0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil	0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute	0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD8	0
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast	0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear	0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate	0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD4	0
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung	0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth	-0.0608
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum	0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil	0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast	0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte	0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal	0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal	0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma	0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory	0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial	0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic	0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD4	0
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small	-0.5
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat	0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular	0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus	0.328
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic	0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial	0.328
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal	0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal	0.657
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left	0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart	0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature	0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea	0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal	0.701
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD34	0
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral	0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte	1.065
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed	0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral	0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital	0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood	0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala	0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal	0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils	0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic	0.871
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid	0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole	0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus	0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea	0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory	0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen	0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile	0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula	0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt	0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea	0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms	0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD133	0
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus	0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small	0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal	0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon	0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder	0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature	0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS	0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel	0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix	0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus	0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma	0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas	0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma	0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas	0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma	0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary	0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature	0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma	0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue	0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural	0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H9	0
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic	1.137
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature	0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical	0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b	0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph	0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute	0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic	0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils	0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus	0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung	0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma	0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK	0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast	0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue	0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate	0.0342
C72-skeletal-tongue-throat-heart-diaphragm-penis-left	0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal	0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy	0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral	0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell	0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD8	0
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea	0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal	0.971
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD34	0
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast	0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid	0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD34	0
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic	0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon	0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma	0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma	0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic	0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived	0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic	0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left	0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen	0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair	0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole	0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular	0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma	0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid	0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix	0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain	0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole	0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid	0

Repeat families with enriched expression in this sampleSummary:Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed. Analyst:NA link to dataset. data

TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifsSummary:Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression Analyst: Michiel de Hoon link to dataset. data

library id: CNhs12013

Jaspar motif	Logo	P-value
MA0002.2	MA0002.2	0.0288
MA0003.1	MA0003.1	0.723
MA0004.1	MA0004.1	0.162
MA0006.1	MA0006.1	0.137
MA0007.1	MA0007.1	0.914
MA0009.1	MA0009.1	0.195
MA0014.1	MA0014.1	0.0729
MA0017.1	MA0017.1	0.258
MA0018.2	MA0018.2	2.10635e-4
MA0019.1	MA0019.1	0.971
MA0024.1	MA0024.1	8.17721e-7
MA0025.1	MA0025.1	3.29764e-4
MA0027.1	MA0027.1	0.92
MA0028.1	MA0028.1	0.146
MA0029.1	MA0029.1	0.475
MA0030.1	MA0030.1	0.283
MA0031.1	MA0031.1	0.195
MA0035.2	MA0035.2	0.0921
MA0038.1	MA0038.1	0.00199
MA0039.2	MA0039.2	3.77115e-4
MA0040.1	MA0040.1	0.445
MA0041.1	MA0041.1	0.93
MA0042.1	MA0042.1	0.907
MA0043.1	MA0043.1	0.00101
MA0046.1	MA0046.1	0.127
MA0047.2	MA0047.2	0.318
MA0048.1	MA0048.1	0.126
MA0050.1	MA0050.1	2.05045e-5
MA0051.1	MA0051.1	0.00286
MA0052.1	MA0052.1	0.0573
MA0055.1	MA0055.1	0.89
MA0057.1	MA0057.1	0.754
MA0058.1	MA0058.1	0.0383
MA0059.1	MA0059.1	0.592
MA0060.1	MA0060.1	3.21972e-12
MA0061.1	MA0061.1	3.79438e-4
MA0062.2	MA0062.2	1.28988e-5
MA0065.2	MA0065.2	0.143
MA0066.1	MA0066.1	0.853
MA0067.1	MA0067.1	0.0232
MA0068.1	MA0068.1	0.652
MA0069.1	MA0069.1	0.0438
MA0070.1	MA0070.1	0.798
MA0071.1	MA0071.1	0.973
MA0072.1	MA0072.1	0.193
MA0073.1	MA0073.1	0.781
MA0074.1	MA0074.1	0.525
MA0076.1	MA0076.1	0.012
MA0077.1	MA0077.1	0.908
MA0078.1	MA0078.1	0.805
MA0079.2	MA0079.2	0.576
MA0080.2	MA0080.2	3.95729e-7
MA0081.1	MA0081.1	0.01
MA0083.1	MA0083.1	0.032
MA0084.1	MA0084.1	0.546
MA0087.1	MA0087.1	0.71
MA0088.1	MA0088.1	0.108
MA0090.1	MA0090.1	4.34843e-5
MA0091.1	MA0091.1	0.0601
MA0092.1	MA0092.1	0.0868
MA0093.1	MA0093.1	0.126
MA0099.2	MA0099.2	2.10903e-5
MA0100.1	MA0100.1	0.421
MA0101.1	MA0101.1	7.08772e-6
MA0102.2	MA0102.2	0.0435
MA0103.1	MA0103.1	0.00842
MA0104.2	MA0104.2	0.00223
MA0105.1	MA0105.1	0.0031
MA0106.1	MA0106.1	0.253
MA0107.1	MA0107.1	5.08964e-6
MA0108.2	MA0108.2	0.871
MA0111.1	MA0111.1	0.285
MA0112.2	MA0112.2	0.137
MA0113.1	MA0113.1	0.674
MA0114.1	MA0114.1	0.0961
MA0115.1	MA0115.1	0.0437
MA0116.1	MA0116.1	0.689
MA0117.1	MA0117.1	0.35
MA0119.1	MA0119.1	0.145
MA0122.1	MA0122.1	0.226
MA0124.1	MA0124.1	0.0113
MA0125.1	MA0125.1	0.249
MA0131.1	MA0131.1	0.365
MA0135.1	MA0135.1	0.196
MA0136.1	MA0136.1	6.17955e-12
MA0137.2	MA0137.2	0.174
MA0138.2	MA0138.2	0.526
MA0139.1	MA0139.1	0.526
MA0140.1	MA0140.1	0.382
MA0141.1	MA0141.1	0.529
MA0142.1	MA0142.1	0.085
MA0143.1	MA0143.1	0.778
MA0144.1	MA0144.1	0.836
MA0145.1	MA0145.1	0.614
MA0146.1	MA0146.1	0.482
MA0147.1	MA0147.1	0.0292
MA0148.1	MA0148.1	0.549
MA0149.1	MA0149.1	0.531
MA0150.1	MA0150.1	0.013
MA0152.1	MA0152.1	0.0407
MA0153.1	MA0153.1	0.838
MA0154.1	MA0154.1	0.467
MA0155.1	MA0155.1	0.301
MA0156.1	MA0156.1	2.85434e-8
MA0157.1	MA0157.1	0.374
MA0159.1	MA0159.1	0.602
MA0160.1	MA0160.1	0.0287
MA0162.1	MA0162.1	0.2
MA0163.1	MA0163.1	0.133
MA0164.1	MA0164.1	0.277
MA0258.1	MA0258.1	0.628
MA0259.1	MA0259.1	0.206

FANTOM5 phase1 novel unique motifsSummary:Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above Analyst: Michiel de Hoon link to dataset. data

library id: CNhs12013

Novel motif	Logo	P-value
1	1	0.787
10	10	0.902
100	100	0.994
101	101	0.39
102	102	0.141
103	103	0.802
104	104	0.863
105	105	0.0111
106	106	0.194
107	107	0.246
108	108	0.189
109	109	0.948
11	11	0.721
110	110	0.635
111	111	0.632
112	112	0.602
113	113	0.509
114	114	0.142
115	115	0.0102
116	116	0.0218
117	117	0.73
118	118	0.285
119	119	0.672
12	12	0.562
120	120	0.677
121	121	0.419
122	122	0.244
123	123	0.0579
124	124	0.239
125	125	0.766
126	126	0.287
127	127	0.289
128	128	0.362
129	129	0.622
13	13	0.39
130	130	0.335
131	131	0.675
132	132	0.524
133	133	0.722
134	134	0.736
135	135	0.795
136	136	0.423
137	137	0.536
138	138	0.953
139	139	0.0708
14	14	0.163
140	140	0.361
141	141	0.618
142	142	0.645
143	143	0.658
144	144	0.48
145	145	0.337
146	146	0.309
147	147	0.0985
148	148	0.765
149	149	0.00262
15	15	0.734
150	150	0.414
151	151	0.82
152	152	0.0182
153	153	0.608
154	154	0.68
155	155	0.0107
156	156	0.57
157	157	0.48
158	158	0.0539
159	159	0.816
16	16	0.0234
160	160	0.747
161	161	0.403
162	162	0.925
163	163	0.328
164	164	0.052
165	165	0.708
166	166	0.0781
167	167	0.916
168	168	0.723
169	169	0.197
17	17	0.595
18	18	0.156
19	19	0.0219
2	2	0.446
20	20	0.571
21	21	0.461
22	22	0.607
23	23	0.388
24	24	0.0913
25	25	0.224
26	26	0.885
27	27	0.854
28	28	0.177
29	29	0.881
3	3	0.771
30	30	0.846
31	31	0.618
32	32	4.34948e-17
33	33	0.594
34	34	0.853
35	35	0.924
36	36	0.0112
37	37	0.147
38	38	0.37
39	39	0.38
4	4	0.87
40	40	0.139
41	41	0.54
42	42	0.364
43	43	0.967
44	44	0.382
45	45	0.612
46	46	0.97
47	47	0.962
48	48	0.737
49	49	0.671
5	5	0.69
50	50	0.901
51	51	0.637
52	52	0.83
53	53	0.0895
54	54	0.716
55	55	0.128
56	56	0.488
57	57	0.845
58	58	0.187
59	59	0.511
6	6	0.367
60	60	0.989
61	61	0.515
62	62	0.53
63	63	0.614
64	64	0.331
65	65	0.749
66	66	0.101
67	67	0.251
68	68	0.446
69	69	0.743
7	7	0.197
70	70	0.544
71	71	0.899
72	72	0.527
73	73	0.00421
74	74	0.285
75	75	0.701
76	76	0.809
77	77	0.0782
78	78	0.37
79	79	0.00423
8	8	0.365
80	80	0.0959
81	81	0.599
82	82	0.383
83	83	0.232
84	84	0.319
85	85	0.0548
86	86	0.413
87	87	0.409
88	88	0.998
89	89	0.174
9	9	0.828
90	90	0.911
91	91	0.993
92	92	0.133
93	93	0.468
94	94	0.894
95	95	0.702
96	96	0.776
97	97	0.424
98	98	0.496
99	99	0.124

de novo motifs identified by HOMER in promoters active in this sampleSummary:The result of HOMER in this sample is shown. Analyst:NA library id: CNhs12013

FANTOM5 (FF) ontology

Direct parent terms

is_a relathionship
EFO:0002091 biological replicate
FF:0000140 human omentum preadipocyte sample

Ancestor terms (non development)Summary:Connected ontology terms with is_a, part_of or located_in relationship Analyst: Hideya Kawaji link to source data data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000548 (animal cell)
0002320 (connective tissue cell)
0002371 (somatic cell)
0000255 (eukaryotic cell)
0000057 (fibroblast)
0002334 (preadipocyte)
0002579 (omentum preadipocyte)

UBERON: Anatomy
0000468 (multi-cellular organism)
0003688 (omentum)
0002100 (trunk)
0002384 (connective tissue)
0000479 (tissue)
0000064 (organ part)
0000466 (immaterial anatomical entity)
0000062 (organ)
0000475 (organism subdivision)
0004120 (mesoderm-derived structure)
0004457 (cavity lining)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000063 (organ segment)
0004923 (organ component layer)
0002553 (anatomical cavity)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0009569 (subdivision of trunk)
0002323 (body cavity)
0000042 (serous membrane)
0000464 (anatomical space)
0004458 (body cavity or lining)
0010317 (germ layer / neural crest derived structure)
0002417 (abdominal segment of trunk)
0002358 (peritoneum)
0000916 (abdomen)
0003684 (abdominal cavity)
0001178 (visceral peritoneum)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000137 (human preadipocyte sample)
0000140 (human omentum preadipocyte sample)

Ancestor terms (development)Summary:Connected ontology terms with develops_from, derives_from or preceded_by relationship Analyst: Hideya Kawaji link to source data data
CL:0000134 (mesenchymal cell)

@@ Line 13: / Line 13: @@
 |def=
 |expression_enrichment_score=chr6:134210243..134210257,+!p1@TCF21!1.82!64.34!TCF21;;chr12:54410664..54410684,+!p1@HOXC4,p1@HOXC5,p1@HOXC6!1.58!37.16!HOXC5;;chr19:47523058..47523114,+!p1@NPAS1!1.53!32.81!NPAS1;;chr11:46299199..46299233,+!p1@CREB3L1!1.43!129.97!CREB3L1;;chr2:19558373..19558392,-!p1@OSR1!1.43!69.97!OSR1;;chr8:72756637..72756664,-!p3@MSC!1.43!29.44!MSC;;chr18:19749541..19749557,+!p1@GATA6!1.41!76.24!GATA6;;chr11:46299539..46299620,+!p2@CREB3L1!1.39!39.73!CREB3L1;;chr18:19749386..19749404,+!p2@GATA6!1.38!32.81!GATA6;;chr9:132427883..132427951,+!p2@PRRX2!1.33!20.59!PRRX2;;chr12:54402745..54402788,+!p1@HOXC8!1.33!20.43!HOXC8;;chr9:132427972..132428056,+!p1@PRRX2!1.26!22.36!PRRX2;;chr9:96717629..96717644,-!p1@BARX1!1.24!16.57!BARX1;;chr6:144329384..144329405,-!p1@PLAGL1!1.20!167.77!PLAGL1;;chr14:62162285..62162296,+!p3@HIF1A!1.18!72.38!HIF1A;;chr8:72756667..72756736,-!p2@MSC!1.18!22.04!MSC;;chr14:62162258..62162269,+!p2@HIF1A!1.15!125.63!HIF1A;;chr8:72756267..72756296,-!p4@MSC!1.14!18.98!MSC;;chr16:86600426..86600441,+!p1@FOXC2!1.13!30.56!FOXC2;;chr1:23885981..23886002,-!p1@ID3!1.12!2122.79!ID3;;chr17:46682321..46682362,-!p1@HOXB6!1.09!11.42!HOXB6;;chr5:72744594..72744609,-!p1@FOXD1!1.05!47.29!FOXD1;;chr12:80085061..80085119,-!p6@PAWR!1.05!16.25!PAWR;;chr8:25902876..25902936,-!p1@EBF2!1.05!10.13!EBF2;;chr18:53068911..53068935,-!p4@TCF4!1.04!11.26!TCF4;;chr7:44143978..44143989,+!p2@AEBP1!1.03!18.02!AEBP1;;chr12:54410639..54410659,+!p2@HOXC4,p2@HOXC5,p2@HOXC6!1.03!9.81!HOXC5;;chr7:44143925..44143970,+!p1@AEBP1!0.99!202.19!AEBP1;;chr19:50432453..50432468,+!p1@ATF5!0.98!493.66!ATF5;;chr17:1959369..1959388,+!p2@HIC1!0.98!22.84!HIC1;;chr8:72756213..72756243,-!p5@MSC!0.98!11.10!MSC;;chr4:111544219..111544240,-!p1@PITX2!0.98!8.53!PITX2;;chr4:111558135..111558198,-!p2@PITX2!0.97!8.36!PITX2;;chr7:1577899..1577943,+!p3@MAFK!0.97!8.36!MAFK;;chr7:27183263..27183284,-!p2@HOXA5!0.97!8.36!HOXA5;;chr8:49833948..49833973,-!p2@SNAI2!0.96!53.56!SNAI2;;chr14:62213827..62213853,+!p6@HIF1A!0.96!11.58!HIF1A;;chr16:86544113..86544145,+!p1@FOXF1!0.96!10.13!FOXF1;;chr5:139492456..139492489,+!p7@PURA!0.96!8.20!PURA;;chr1:170632285..170632309,+!p1@PRRX1!0.94!8.69!PRRX1;;chr8:72756063..72756125,-!p1@MSC!0.92!15.12!MSC;;chr4:174450089..174450153,-!p2@HAND2!0.92!7.40!HAND2;;chrX:106960180..106960197,-!p2@TSC22D3!0.90!27.83!TSC22D3;;chr15:96874145..96874166,+!p7@NR2F2!0.90!13.83!NR2F2;;chr14:62203595..62203676,+!p4@HIF1A!0.90!13.51!HIF1A;;chr5:72744445..72744466,-!p2@FOXD1!0.90!11.90!FOXD1;;chr9:96717678..96717689,-!p2@BARX1!0.90!6.92!BARX1;;chr2:121493425..121493474,+!p1@GLI2!0.89!15.28!GLI2;;chr11:12696071..12696086,+!p3@TEAD1!0.89!9.01!TEAD1;;chrY:2803415..2803468,+!p1@ZFY!0.89!6.76!ZFY;;chr17:46688334..46688385,-!p1@HOXB7!0.88!9.81!HOXB7;;chr2:8822176..8822196,+!p1@ID2!0.87!960.78!ID2;;chr17:46703687..46703740,-!p1@HOXB9!0.87!6.43!HOXB9;;chr12:54402790..54402805,+!p2@HOXC8!0.87!6.43!HOXC8;;chrY:21906594..21906622,-!p1@KDM5D!0.87!6.43!KDM5D;;chr8:49833978..49833996,-!p1@SNAI2!0.86!137.21!SNAI2;;chr6:144289132..144289134,-!p3@PLAGL1!0.86!15.12!PLAGL1;;chr17:46687959..46688007,-!p2@HOXB7!0.86!8.85!HOXB7;;chr7:27183291..27183324,-!p1@HOXA5!0.86!6.27!HOXA5;;chr1:170633058..170633084,+!p5@PRRX1!0.86!6.27!PRRX1;;chr6:19837592..19837621,+!p1@ID4!0.85!39.09!ID4;;chr10:63809013..63809041,+!p3@ARID5B!0.85!35.71!ARID5B;;chr2:239756671..239756732,+!p1@TWIST2!0.85!20.75!TWIST2;;chr15:96869255..96869291,+!p6@NR2F2!0.85!11.58!NR2F2;;chr2:119605214..119605230,-!p1@EN1!0.85!6.11!EN1;;chr10:131762504..131762555,-!p1@EBF3!0.85!6.11!EBF3;;chr8:106330656..106330684,+!p1@ZFPM2!0.84!16.25!ZFPM2;;chr17:38498594..38498661,+!p2@RARA!0.83!20.27!RARA;;chr7:27183114..27183138,-!p3@HOXA5!0.83!5.79!HOXA5;;chr5:92918919..92918942,+!p1@NR2F1!0.82!26.86!NR2F1;;chr14:62213758..62213774,+!p8@HIF1A!0.82!7.40!HIF1A;;chr7:27196267..27196311,-!p1@HOXA7!0.82!5.63!HOXA7;;chr17:46622070..46622109,-!p1@HOXB2!0.81!12.87!HOXB2;;chr2:121493492..121493537,+!p2@GLI2!0.81!9.33!GLI2;;chr2:85980951..85981004,+!p1@ATOH8!0.81!9.33!ATOH8;;chr14:62203749..62203798,+!p5@HIF1A!0.81!8.69!HIF1A;;chr17:46621937..46621966,-!p2@HOXB2!0.80!15.28!HOXB2;;chr18:19749517..19749531,+!p3@GATA6!0.80!9.81!GATA6;;chr7:44143997..44144008,+!p3@AEBP1!0.80!6.92!AEBP1;;chr7:27153454..27153469,-!p2@HOXA3!0.80!5.31!HOXA3;;chr12:54393880..54393962,+!p1@HOXC9!0.80!5.31!HOXC9;;chr14:62214151..62214164,+!p11@HIF1A!0.80!5.31!HIF1A;;chr1:170632959..170632987,+!p4@PRRX1!0.79!5.79!PRRX1;;chr16:31076332..31076388,-!p3@ZNF668!0.79!5.15!ZNF668;;chr11:46299443..46299459,+!p4@CREB3L1!0.78!4.99!CREB3L1;;chr12:54402729..54402743,+!p3@HOXC8!0.78!4.99!HOXC8;;chr15:96874244..96874259,+!p5@NR2F2!0.77!12.71!NR2F2;;chr4:174451370..174451387,-!p1@HAND2!0.77!4.83!HAND2;;chr16:4366053..4366076,+!p@chr16:4366053..4366076,+!0.76!52.28!GLIS2;;chr7:150945754..150945789,-!p2@SMARCD3!0.76!15.92!SMARCD3;;chr14:62162224..62162254,+!p1@HIF1A!0.75!747.65!HIF1A;;chr12:80085120..80085156,-!p14@PAWR!0.75!4.66!PAWR;;chr7:27192185..27192209,-!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+|fantom_cat=http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000057;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000222;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0002334;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0002579;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0001178;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002323
 |ffid_belonging_in_development=CL:0000134
 |fonse_cell_line=

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FF:11403-118D8: Difference between revisions

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Revision as of 15:12, 15 May 2017

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	Mozilla Cavendish skin modified by DaSch for the Web Community Wiki GitHub project page – Report a bug – Skin version: 2.6.0