FF:10023-101D5: Difference between revisions

Latest revision as of 12:14, 3 June 2020

Name:	skeletal muscle, adult, pool1
Species:	Human (Homo sapiens)
Library ID:	CNhs10629
Sample type:	tissues
Genomic View:	UCSC
RefEX:	Specific genes
FANTOM CAT:	1, 2
CAGEd-oPOSSUM:	link
ZENBU report :	link

Additional information

Sample information

strain	NA
tissue	skeletal muscle
dev stage	55,79,79 years old adult
sex	mixed
age	NA
cell type	CELL MIXTURE - tissue sample
cell line	NA
company	Ambion
collaboration	FANTOM5 OSC CORE (contact: Al Forrest)
External link for information	[{{{sample_info_link}}} {{{sample_info_link}}}]

RNA information

lot number	0910061 -14
catalog number	Cat:AM6000 Lot:0910061 -14
sample type	total RNA
extraction protocol (Details)	OP-RNA-extraction-totalRNA-ToTALLY-RNA-v1.0

CAGE Accession numbers

Method		Sample accession id
CAGE		SAMD00005588

Library accession numbers

Library id		Method		Exp. accession id		Run accession id
CNhs10629		CAGE		DRX008720		DRR009592

Accession ID Hg19

Library id		BAM		CTSS
CNhs10629		DRZ001017		DRZ002402

Accession ID Hg38

Library id		BAM		CTSS
CNhs10629		DRZ012367		DRZ013752

Download raw sequence, BAM & CTSS

Hg19

Fasta	BAM	CTSS
download	download	donwload

Hg38

BAM	CTSS
download	donwload

Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.

Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. Analyst:NA link to dataset. data

Coexpression cluster	score
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral	0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate	0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural	0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial	0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel	0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS	0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils	0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural	0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis	-0.042
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy	0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood	0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate	0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma	-0.47
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial	0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic	0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat	0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal	0
C113-thyroid-throat-lung-lymph-small-colon-trachea	0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma	0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus	0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea	0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal	0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula	0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD19	0
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils	0
C120-immature-salivary-tongue-skin-cervical-CD14-CD34	0
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B	0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal	0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils	0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte	0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus	0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain	0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil	0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP	0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small	0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD4	0
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar	0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin	0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived	0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma	0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis	0.336
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum	0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal	0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic	0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal	0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal	0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen	0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen	0.307
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B	0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair	0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast	0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis	0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal	0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell	0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral	0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal	0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum	0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue	0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small	0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast	0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung	0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular	0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate	0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid	0
C156-plasma-splenic-hereditary-B-large-xeroderma-b	0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea	0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen	0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal	0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain	0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral	0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta	0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon	0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal	0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma	0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial	0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung	0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD4	0
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral	0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma	0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage	0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet	0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye	0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes	0.18
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose	0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils	0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural	0
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19	0.122
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous	0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus	0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil	0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood	0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle	0.232
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar	0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute	0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt	0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid	0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis	0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid	0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage	0.0811
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat	0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen	0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma	0
C190-colon-small-rectum-duodenum-appendix-temporal-oral	0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic	0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD4	0
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD14	0
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar	0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal	0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial	0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival	0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes	0.0424
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma	0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast	0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat	0.492
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed	0.355
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall	0
C202-salivary-skin-penis-tongue-uterus-cervical-immature	0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic	0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD34	0
C205-mycosis-cord-hairy-xeroderma-CD4-B-b	0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary	0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte	0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous	0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen	0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic	0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil	0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney	0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD34	0
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral	0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain	0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature	0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD34	0
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital	0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary	0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum	0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD19	0
C220-Adipocyte-mature-left-breast-skin-liver-adipose	0.0424
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular	0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte	0.15
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte	0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal	0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal	0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal	0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue	0.387
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult	0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart	0.016
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD14	0
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung	0.0424
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis	0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum	0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF7	0
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma	0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas	0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma	0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial	0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell	0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy	0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral	0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal	0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus	-1.116
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach	0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing	0.0424
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage	0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic	0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory	0.0774
C247-pons-locus-medulla-spinal-paracentral-medial-occipital	0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast	0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial	0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall	0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD4	0.209
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue	0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma	0.117
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum	0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris	0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast	0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla	0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral	0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric	0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing	0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole	0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood	0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal	0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms	0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil	0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute	0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD8	-0.00972
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast	0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear	0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate	0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD4	0
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung	0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth	0
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum	0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil	0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast	0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte	0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal	0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal	0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma	0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory	0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial	0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic	0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD4	0
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small	-0.553
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat	0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular	0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus	4.206229e-4
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic	0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial	0.0424
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal	0.208
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal	0.0424
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left	0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart	0.0424
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature	0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea	0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal	0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD34	0
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral	0.0811
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte	0
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed	0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral	0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital	0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood	0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala	0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal	0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils	0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic	0
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid	0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole	0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus	1.021
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea	0.78
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory	0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen	0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile	0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula	0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt	0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea	0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms	0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD133	0
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus	0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small	0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal	0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon	0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder	0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature	0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS	0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel	0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix	0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus	0.0424
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma	0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas	0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma	0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas	0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma	0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary	0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature	0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma	0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue	0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural	0.0424
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H9	0
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic	0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature	0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical	0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b	0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph	0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute	0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic	0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils	0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus	0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung	0.0424
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma	0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK	0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast	0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue	0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate	0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left	1.027
C73-pineal-eye-retina-caudate-cerebellum-left-parietal	0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy	0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral	0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell	0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD8	0
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea	0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal	0
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD34	0
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast	0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid	0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD34	0
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic	0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon	0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma	0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma	0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic	0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived	0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic	0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left	0.773
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen	0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair	0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole	0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular	0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma	0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid	0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix	0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain	0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole	0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid	0

Repeat families with enriched expression in this sampleSummary:Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed. Analyst:NA link to dataset. data

TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifsSummary:Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression Analyst: Michiel de Hoon link to dataset. data

library id: CNhs10629

Jaspar motif	Logo	P-value
MA0002.2	MA0002.2	0.0244
MA0003.1	MA0003.1	0.184
MA0004.1	MA0004.1	0.993
MA0006.1	MA0006.1	0.351
MA0007.1	MA0007.1	0.485
MA0009.1	MA0009.1	0.127
MA0014.1	MA0014.1	0.449
MA0017.1	MA0017.1	0.0949
MA0018.2	MA0018.2	0.125
MA0019.1	MA0019.1	0.101
MA0024.1	MA0024.1	9.08118e-4
MA0025.1	MA0025.1	0.243
MA0027.1	MA0027.1	0.651
MA0028.1	MA0028.1	1.53694e-7
MA0029.1	MA0029.1	0.968
MA0030.1	MA0030.1	0.01
MA0031.1	MA0031.1	0.0367
MA0035.2	MA0035.2	0.486
MA0038.1	MA0038.1	0.00528
MA0039.2	MA0039.2	0.00161
MA0040.1	MA0040.1	0.375
MA0041.1	MA0041.1	0.213
MA0042.1	MA0042.1	0.243
MA0043.1	MA0043.1	0.032
MA0046.1	MA0046.1	0.615
MA0047.2	MA0047.2	0.146
MA0048.1	MA0048.1	1.46164e-5
MA0050.1	MA0050.1	0.0039
MA0051.1	MA0051.1	0.197
MA0052.1	MA0052.1	3.12138e-44
MA0055.1	MA0055.1	1.12303e-5
MA0057.1	MA0057.1	0.98
MA0058.1	MA0058.1	0.952
MA0059.1	MA0059.1	0.554
MA0060.1	MA0060.1	3.76103e-5
MA0061.1	MA0061.1	0.0102
MA0062.2	MA0062.2	1.95594e-15
MA0065.2	MA0065.2	0.0308
MA0066.1	MA0066.1	0.281
MA0067.1	MA0067.1	0.706
MA0068.1	MA0068.1	0.0415
MA0069.1	MA0069.1	0.71
MA0070.1	MA0070.1	0.621
MA0071.1	MA0071.1	0.142
MA0072.1	MA0072.1	0.631
MA0073.1	MA0073.1	0.568
MA0074.1	MA0074.1	0.53
MA0076.1	MA0076.1	4.47677e-8
MA0077.1	MA0077.1	0.131
MA0078.1	MA0078.1	0.263
MA0079.2	MA0079.2	0.961
MA0080.2	MA0080.2	5.33263e-6
MA0081.1	MA0081.1	0.0217
MA0083.1	MA0083.1	0.00425
MA0084.1	MA0084.1	0.834
MA0087.1	MA0087.1	0.371
MA0088.1	MA0088.1	0.208
MA0090.1	MA0090.1	0.141
MA0091.1	MA0091.1	0.00252
MA0092.1	MA0092.1	0.129
MA0093.1	MA0093.1	0.983
MA0099.2	MA0099.2	1.86655e-5
MA0100.1	MA0100.1	0.0422
MA0101.1	MA0101.1	0.0222
MA0102.2	MA0102.2	0.0481
MA0103.1	MA0103.1	0.625
MA0104.2	MA0104.2	0.34
MA0105.1	MA0105.1	0.0325
MA0106.1	MA0106.1	0.436
MA0107.1	MA0107.1	0.00997
MA0108.2	MA0108.2	5.62196e-17
MA0111.1	MA0111.1	0.923
MA0112.2	MA0112.2	3.28312e-4
MA0113.1	MA0113.1	6.38467e-4
MA0114.1	MA0114.1	0.131
MA0115.1	MA0115.1	0.0493
MA0116.1	MA0116.1	0.0799
MA0117.1	MA0117.1	0.744
MA0119.1	MA0119.1	0.165
MA0122.1	MA0122.1	0.103
MA0124.1	MA0124.1	0.633
MA0125.1	MA0125.1	0.358
MA0131.1	MA0131.1	0.0245
MA0135.1	MA0135.1	0.971
MA0136.1	MA0136.1	3.6327e-8
MA0137.2	MA0137.2	0.551
MA0138.2	MA0138.2	0.855
MA0139.1	MA0139.1	0.131
MA0140.1	MA0140.1	0.388
MA0141.1	MA0141.1	0.00142
MA0142.1	MA0142.1	0.0552
MA0143.1	MA0143.1	0.423
MA0144.1	MA0144.1	0.424
MA0145.1	MA0145.1	0.0797
MA0146.1	MA0146.1	0.395
MA0147.1	MA0147.1	0.276
MA0148.1	MA0148.1	0.153
MA0149.1	MA0149.1	0.214
MA0150.1	MA0150.1	0.921
MA0152.1	MA0152.1	0.729
MA0153.1	MA0153.1	0.2
MA0154.1	MA0154.1	0.993
MA0155.1	MA0155.1	0.115
MA0156.1	MA0156.1	9.14842e-12
MA0157.1	MA0157.1	0.0783
MA0159.1	MA0159.1	0.13
MA0160.1	MA0160.1	0.0146
MA0162.1	MA0162.1	0.565
MA0163.1	MA0163.1	0.0824
MA0164.1	MA0164.1	0.637
MA0258.1	MA0258.1	0.00704
MA0259.1	MA0259.1	0.254

FANTOM5 phase1 novel unique motifsSummary:Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above Analyst: Michiel de Hoon link to dataset. data

library id: CNhs10629

Novel motif	Logo	P-value
1	1	0.568
10	10	0.656
100	100	0.427
101	101	0.0996
102	102	0.678
103	103	0.562
104	104	0.987
105	105	0.478
106	106	0.157
107	107	0.0661
108	108	0.251
109	109	0.56
11	11	0.735
110	110	0.315
111	111	0.755
112	112	0.191
113	113	0.895
114	114	0.679
115	115	0.524
116	116	0.424
117	117	0.218
118	118	0.0572
119	119	0.0778
12	12	0.963
120	120	0.172
121	121	0.962
122	122	0.295
123	123	0.0641
124	124	0.263
125	125	0.694
126	126	0.607
127	127	0.788
128	128	0.064
129	129	0.902
13	13	0.608
130	130	0.872
131	131	0.154
132	132	0.389
133	133	0.00154
134	134	0.124
135	135	0.0561
136	136	0.496
137	137	0.757
138	138	0.918
139	139	0.00829
14	14	0.205
140	140	0.355
141	141	0.928
142	142	0.785
143	143	0.0241
144	144	0.585
145	145	0.836
146	146	0.318
147	147	0.00153
148	148	0.28
149	149	0.0792
15	15	0.874
150	150	0.644
151	151	0.147
152	152	0.414
153	153	0.125
154	154	0.986
155	155	0.546
156	156	0.219
157	157	0.505
158	158	0.492
159	159	0.586
16	16	0.543
160	160	0.717
161	161	0.2
162	162	0.771
163	163	0.49
164	164	0.113
165	165	0.0174
166	166	0.427
167	167	0.388
168	168	0.597
169	169	0.128
17	17	0.863
18	18	0.64
19	19	0.0208
2	2	0.141
20	20	0.0255
21	21	0.417
22	22	0.0552
23	23	0.181
24	24	0.242
25	25	0.706
26	26	0.343
27	27	0.648
28	28	0.609
29	29	0.0975
3	3	0.896
30	30	0.153
31	31	0.494
32	32	0.556
33	33	0.346
34	34	0.328
35	35	0.451
36	36	0.05
37	37	0.472
38	38	0.961
39	39	0.0405
4	4	0.996
40	40	0.0387
41	41	0.395
42	42	0.399
43	43	0.687
44	44	0.0203
45	45	0.13
46	46	0.869
47	47	0.409
48	48	0.442
49	49	0.923
5	5	0.388
50	50	0.502
51	51	0.909
52	52	0.0701
53	53	0.644
54	54	0.488
55	55	0.195
56	56	0.824
57	57	0.766
58	58	0.58
59	59	0.516
6	6	0.815
60	60	0.0617
61	61	0.791
62	62	0.223
63	63	0.205
64	64	0.613
65	65	0.344
66	66	0.0273
67	67	0.549
68	68	0.373
69	69	0.515
7	7	0.229
70	70	0.314
71	71	0.376
72	72	0.356
73	73	0.537
74	74	0.414
75	75	0.399
76	76	0.184
77	77	0.0783
78	78	0.123
79	79	0.0231
8	8	0.672
80	80	0.575
81	81	0.485
82	82	0.381
83	83	0.632
84	84	0.302
85	85	0.0132
86	86	0.375
87	87	0.461
88	88	0.992
89	89	0.128
9	9	0.376
90	90	0.993
91	91	0.311
92	92	0.177
93	93	0.862
94	94	0.518
95	95	0.0582
96	96	0.406
97	97	0.94
98	98	0.1
99	99	0.438

de novo motifs identified by HOMER in promoters active in this sampleSummary:The result of HOMER in this sample is shown. Analyst:NA library id: CNhs10629

FANTOM5 (FF) ontology

Direct parent terms

is_a relathionship
EFO:0002091 biological replicate
FF:0010023 human skeletal muscle - adult sample

Ancestor terms (non development)Summary:Connected ontology terms with is_a, part_of or located_in relationship Analyst: Hideya Kawaji link to source data data

UBERON: Anatomy
0000468 (multi-cellular organism)
0007023 (adult organism)
0001134 (skeletal muscle tissue)
0000479 (tissue)
0004120 (mesoderm-derived structure)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0002036 (striated muscle tissue)
0002385 (muscle tissue)
0010317 (germ layer / neural crest derived structure)
0001015 (musculature)
0002204 (musculoskeletal system)
0000383 (musculature of body)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000101 (sample by species)
0000001 (sample)
0000998 (adult tissue sample)
0000004 (tissue sample)
0010023 (human skeletal muscle - adult sample)

Ancestor terms (development)Summary:Connected ontology terms with develops_from, derives_from or preceded_by relationship Analyst: Hideya Kawaji link to source data data
UBERON:0002532 (epiblast (generic))
UBERON:0006603 (presumptive mesoderm)
UBERON:0003104 (mesenchyme)
UBERON:0010316 (germ layer / neural crest)

@@ Line 1: / Line 1: @@
 {{f5samples
-|ancestors_in_anatomy_facet=UBERON:0000061,UBERON:0000119,UBERON:0000383,UBERON:0000465,UBERON:0000467,UBERON:0000468,UBERON:0000475,UBERON:0000479,UBERON:0000480,UBERON:0000481,UBERON:0000483,UBERON:0000486,UBERON:0000490,UBERON:0000914,UBERON:0000922,UBERON:0000923,UBERON:0000926,UBERON:0001015,UBERON:0001062,UBERON:0001134,UBERON:0002036,UBERON:0002050,UBERON:0002204,UBERON:0002329,UBERON:0002385,UBERON:0002532,UBERON:0003059,UBERON:0003077,UBERON:0003082,UBERON:0003104,UBERON:0004120,UBERON:0004290,UBERON:0005291,UBERON:0005423,UBERON:0007023,UBERON:0009142
+|DRA_sample_Accession=CAGE@SAMD00005588
+|accession_numbers=CAGE;DRX008720;DRR009592;DRZ001017;DRZ002402;DRZ012367;DRZ013752
+|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0007023,UBERON:0001134,UBERON:0000479,UBERON:0004120,UBERON:0000061,UBERON:0000465,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0002036,UBERON:0002385,UBERON:0010317,UBERON:0001015,UBERON:0002204,UBERON:0000383
 |ancestors_in_cell_lineage_facet=
 |ancestors_in_disease_facet=
+|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000101,FF:0000001,FF:0000998,FF:0000004,FF:0010023
 |comment=
 |created_by=
 |creation_date=
+|data_phase=2
+|datafreeze_phase=2
 |def=
 |expression_enrichment_score=chr12:81101404..81101421,+!p1@MYF6!2.76!577.17!MYF6;;chr12:10875658..10875708,-!p2@CSDA!2.59!856.21!CSDA;;chr12:52437488..52437507,+!p2@NR4A1!2.44!276.47!NR4A1;;chr15:42749722..42749739,-!p2@ZFP106!2.43!470.81!ZFP106;;chr1:151804244..151804310,-!p1@RORC!2.13!135.00!RORC;;chr1:203055129..203055147,-!p1@MYOG!1.94!86.24!MYOG;;chr12:10875831..10876025,-!p1@CSDA!1.88!5761.44!CSDA;;chr12:10870927..10870966,-!p5@CSDA!1.86!71.56!CSDA;;chr12:81101472..81101483,+!p2@MYF6!1.85!69.71!MYF6;;chr20:62680984..62680999,-!p1@SOX18!1.76!73.20!SOX18;;chr3:141150883..141150961,+!p6@ZBTB38!1.76!56.16!ZBTB38;;chr3:189349162..189349207,+!p2@TP63!1.72!51.23!TP63;;chr11:113930425..113930471,+!p1@ZBTB16!1.65!61.60!ZBTB16;;chr22:19748231..19748317,+!p1@TBX1!1.65!44.04!TBX1;;chr3:141151009..141151033,+!p10@ZBTB38!1.63!41.99!ZBTB38;;chr12:54378923..54378966,+!p1@HOXC10!1.54!33.37!HOXC10;;chr1:170633348..170633399,+!p2@PRRX1!1.52!43.22!PRRX1;;chr21:39870339..39870443,-!p1@ERG!1.52!32.34!ERG;;chr12:10875768..10875808,-!p3@CSDA!1.51!47.22!CSDA;;chr3:126076242..126076257,-!p1@KLF15!1.51!38.40!KLF15;;chr17:38256799..38256815,-!p3@NR1D1!1.50!54.41!NR1D1;;chr3:69788576..69788648,+!p1@MITF!1.49!153.79!MITF;;chr12:10870989..10871013,-!p11@CSDA!1.49!29.77!CSDA;;chr8:55370487..55370503,+!p1@SOX17!1.49!29.57!SOX17;;chr14:61116183..61116208,-!p1@SIX1!1.46!102.35!SIX1;;chr17:38256822..38256851,-!p1@NR1D1!1.45!207.07!NR1D1;;chr1:170632285..170632309,+!p1@PRRX1!1.45!30.49!PRRX1;;chr1:119530493..119530572,-!p1@TBX15!1.44!26.49!TBX15;;chr3:189348969..189349018,+!p4@TP63!1.44!26.49!TP63;;chr15:60884706..60884743,-!p1@RORA!1.42!127.51!RORA;;chr12:26277817..26277863,-!p2@BHLHE41!1.42!33.78!BHLHE41;;chr7:73038839..73038862,-!p1@MLXIPL!1.41!24.43!MLXIPL;;chr1:170633262..170633285,+!p3@PRRX1!1.40!27.82!PRRX1;;chr8:10588010..10588030,-!p1@SOX7!1.40!24.23!SOX7;;chr13:41240717..41240735,-!p2@FOXO1!1.39!154.61!FOXO1;;chr12:81101442..81101449,+!p3@MYF6!1.38!23.00!MYF6;;chr6:126070769..126070801,+!p1@HEY2!1.35!24.33!HEY2;;chr12:10871020..10871032,-!p26@CSDA!1.34!20.74!CSDA;;chr11:125034640..125034655,+!p1@PKNOX2!1.33!20.33!PKNOX2;;chr9:102584159..102584174,+!p2@NR4A3!1.32!35.42!NR4A3;;chr12:26277956..26277980,-!p1@BHLHE41!1.30!66.63!BHLHE41;;chr12:3069037..3069119,+!p2@TEAD4!1.29!62.21!TEAD4;;chr7:27205136..27205164,-!p1@HOXA9!1.29!18.48!HOXA9;;chr12:54393880..54393962,+!p1@HOXC9!1.27!17.66!HOXC9;;chr5:134369879..134369898,-!p2@PITX1!1.26!17.14!PITX1;;chr13:41240737..41240787,-!p1@FOXO1!1.24!189.52!FOXO1;;chr11:113930291..113930339,+!p2@ZBTB16!1.24!26.90!ZBTB16;;chr1:170633058..170633084,+!p5@PRRX1!1.24!16.22!PRRX1;;chr8:48650715..48650735,-!p1@CEBPD!1.23!1963.73!CEBPD;;chr1:170632959..170632987,+!p4@PRRX1!1.23!17.35!PRRX1;;chr11:17741111..17741124,+!p1@MYOD1!1.23!15.91!MYOD1;;chr10:63809106..63809127,+!p1@ARID5B!1.22!207.07!ARID5B;;chr3:187463179..187463201,-!p2@BCL6!1.20!61.19!BCL6;;chr1:214161272..214161322,+!p1@PROX1!1.20!20.74!PROX1;;chr7:15726296..15726315,-!p1@MEOX2!1.20!14.99!MEOX2;;chr17:80797886..80797906,-!p1@ZNF750!1.20!14.89!ZNF750;;chr1:40105299..40105326,-!p1@HEYL!1.19!14.37!HEYL;;chr12:81110684..81110700,+!p1@MYF5!1.18!14.06!MYF5;;chr9:73028814..73028895,-!p1@KLF9!1.17!135.72!KLF9;;chr4:87928413..87928433,+!p3@AFF1!1.17!85.21!AFF1;;chr12:10865870..10865888,-!p6@CSDA!1.16!18.48!CSDA;;chr8:25902876..25902936,-!p1@EBF2!1.16!13.55!EBF2;;chr1:165414325..165414369,-!p1@RXRG!1.16!13.45!RXRG;;chr12:10875612..10875631,-!p9@CSDA!1.15!15.71!CSDA;;chr7:15726243..15726293,-!p2@MEOX2!1.15!13.24!MEOX2;;chr7:27196267..27196311,-!p1@HOXA7!1.15!13.14!HOXA7;;chr11:16627528..16627550,-!p7@SOX6!1.14!12.94!SOX6;;chr19:46801639..46801699,+!p1@HIF3A!1.14!12.94!HIF3A;;chr16:79634624..79634642,-!p1@MAF!1.12!48.46!MAF;;chr16:79633894..79633954,-!p3@MAF!1.12!23.72!MAF;;chr9:14313641..14313652,-!p13@NFIB!1.12!12.32!NFIB;;chr2:242556880..242556899,-!p5@THAP4!1.12!12.22!THAP4;;chr17:41739283..41739297,-!p1@MEOX1!1.12!12.11!MEOX1;;chr5:71803177..71803255,-!p1@ZNF366!1.11!11.81!ZNF366;;chr10:63809013..63809041,+!p3@ARID5B!1.10!64.88!ARID5B;;chr14:73360799..73360817,-!p1@DPF3!1.10!40.45!DPF3;;chr10:63809077..63809089,+!p5@ARID5B!1.10!25.36!ARID5B;;chr11:113930401..113930422,+!p3@ZBTB16!1.10!11.60!ZBTB16;;chr5:134369905..134369972,-!p1@PITX1!1.09!17.45!PITX1;;chr12:3068957..3068978,+!p6@TEAD4!1.09!12.83!TEAD4;;chr1:10856639..10856662,-!p2@CASZ1!1.09!11.40!CASZ1;;chr6:108977520..108977534,+!p7@FOXO3!1.09!11.29!FOXO3;;chr7:150945754..150945789,-!p2@SMARCD3!1.08!33.88!SMARCD3;;chr8:106330656..106330684,+!p1@ZFPM2!1.08!29.05!ZFPM2;;chr2:85981222..85981259,+!p2@ATOH8!1.08!18.48!ATOH8;;chr12:10871049..10871064,-!p19@CSDA!1.08!10.98!CSDA;;chr12:52445218..52445237,+!p1@NR4A1!1.07!137.36!NR4A1;;chr3:52001396..52001425,-!p4@PCBP4!1.07!19.10!PCBP4;;chr12:10871068..10871079,-!p25@CSDA!1.07!10.78!CSDA;;chr18:53068911..53068935,-!p4@TCF4!1.06!11.81!TCF4;;chr17:46126136..46126152,+!p1@NFE2L1!1.05!531.90!NFE2L1;;chr12:54410664..54410684,+!p1@HOXC4,p1@HOXC5,p1@HOXC6!1.05!10.16!HOXC5;;chr7:150946015..150946070,-!p3@SMARCD3!1.04!21.97!SMARCD3;;chr7:150945865..150945896,-!p4@SMARCD3!1.04!9.96!SMARCD3;;chr12:10854595..10854628,-!p7@CSDA!1.02!13.24!CSDA;;chrX:106960285..106960299,-!p1@TSC22D3!1.01!251.83!TSC22D3;;chr12:26277929..26277955,-!p3@BHLHE41!1.01!13.24!BHLHE41;;chrX:70315688..70315709,+!p1@FOXO4!1.00!21.46!FOXO4;;chr18:53089453..53089482,-!p11@TCF4!1.00!9.03!TCF4;;chr12:10876282..10876288,-!p29@CSDA!1.00!8.93!CSDA;;chr4:87856191..87856208,+!p2@AFF1!0.99!70.84!AFF1;;chr2:119605214..119605230,-!p1@EN1!0.99!8.73!EN1;;chr1:8483878..8483907,-!p4@RERE!0.98!33.78!RERE;;chr3:52001426..52001447,-!p3@PCBP4!0.98!24.64!PCBP4;;chr7:113726357..113726443,+!p1@FOXP2!0.98!15.09!FOXP2;;chr9:94186085..94186096,-!p3@NFIL3!0.98!14.17!NFIL3;;chr3:126076264..126076305,-!p2@KLF15!0.98!12.22!KLF15;;chr11:16629261..16629284,-!p1@SOX6!0.98!8.52!SOX6;;chr19:16435625..16435682,+!p1@KLF2!0.97!273.90!KLF2;;chr3:114343768..114343822,-!p1@ZBTB20!0.97!37.68!ZBTB20;;chr12:10856713..10856723,-!p23@CSDA!0.97!8.32!CSDA;;chr13:37494365..37494381,-!p1@SMAD9!0.96!14.27!SMAD9;;chr17:53342311..53342400,+!p1@HLF!0.96!9.34!HLF;;chr11:47400078..47400106,-!p1@SPI1!0.96!8.21!SPI1;;chr12:10875481..10875504,-!p14@CSDA!0.96!8.21!CSDA;;chr1:8483756..8483809,-!p5@RERE!0.95!22.48!RERE;;chrX:24167548..24167617,+!p2@ZFX!0.94!24.33!ZFX;;chr8:80679993..80680011,-!p1@HEY1!0.94!11.50!HEY1;;chrX:107018969..107019024,-!p6@TSC22D3!0.94!10.88!TSC22D3;;chr13:27998854..27998866,+!p3@GTF3A!0.93!15.40!GTF3A;;chr12:3068979..3068993,+!p11@TEAD4!0.93!7.60!TEAD4;;chr1:216896752..216896778,-!p1@ESRRG!0.93!7.60!ESRRG;;chr12:10875548..10875563,-!p13@CSDA!0.93!7.49!CSDA;;chr8:144512897..144512903,-!p1@MAFA!0.93!7.49!MAFA;;chr9:73028786..73028797,-!p11@KLF9!0.93!7.49!KLF9;;chr4:111543899..111543923,-!p6@PITX2!0.93!7.49!PITX2;;chr17:6926362..6926377,+!p1@BCL6B!0.92!7.39!BCL6B;;chrX:25034067..25034088,-!p1@ARX!0.92!7.39!ARX;;chr11:12766597..12766618,+!p11@TEAD1!0.92!7.29!TEAD1;;chr20:48807351..48807384,+!p1@CEBPB!0.91!763.30!CEBPB;;chr19:3366570..3366619,+!p1@NFIC!0.91!237.97!NFIC;;chr22:38597987..38598021,+!p2@MAFF!0.91!45.17!MAFF;;chr10:63808979..63808990,+!p8@ARID5B!0.91!7.80!ARID5B;;chr13:41240387..41240405,-!p3@FOXO1!0.91!7.19!FOXO1;;chr9:94186101..94186122,-!p1@NFIL3!0.90!102.46!NFIL3;;chr1:156470515..156470542,-!p2@MEF2D!0.90!38.29!MEF2D;;chr1:216978721..216978728,-!p13@ESRRG!0.90!6.98!ESRRG;;chr12:81101462..81101467,+!p4@MYF6!0.90!6.98!MYF6;;chr2:176994408..176994492,+!p1@HOXD8!0.90!6.88!HOXD8;;chr22:38598086..38598105,+!p1@MAFF!0.89!76.28!MAFF;;chrX:106960180..106960197,-!p2@TSC22D3!0.89!26.90!TSC22D3;;chr11:12696002..12696022,+!p2@TEAD1!0.89!17.25!TEAD1;;chr9:102584262..102584276,+!p1@NR4A3!0.89!15.81!NR4A3;;chr12:10875823..10875827,-!p22@CSDA!0.89!6.78!CSDA;;chr12:54379029..54379057,+!p2@HOXC10!0.89!6.78!HOXC10;;chr1:156470556..156470643,-!p1@MEF2D!0.88!280.58!MEF2D;;chr12:81101753..81101762,+!p5@MYF6!0.88!6.67!MYF6;;chr10:131762504..131762555,-!p1@EBF3!0.88!6.57!EBF3;;chr12:10856697..10856712,-!p12@CSDA!0.88!6.57!CSDA;;chr19:13106214..13106382,+!p1@NFIX!0.87!158.92!NFIX;;chr9:137218341..137218361,+!p2@RXRA!0.87!27.62!RXRA;;chr18:77155922..77155939,+!p1@NFATC1!0.87!18.58!NFATC1;;chr2:19558373..19558392,-!p1@OSR1!0.87!18.58!OSR1;;chrX:107019163..107019179,-!p7@TSC22D3!0.87!7.49!TSC22D3;;chr4:149363494..149363543,-!p1@NR3C2!0.87!6.47!NR3C2;;chr1:61548225..61548299,+!p1@NFIA!0.86!86.03!NFIA;;chr3:18466787..18466839,-!p1@SATB1!0.86!29.26!SATB1;;chr19:3359257..3359362,+!p3@NFIC!0.86!19.81!NFIC;;chr1:8483849..8483868,-!p14@RERE!0.86!10.47!RERE;;chr20:50159198..50159299,-!p1@NFATC2!0.86!9.44!NFATC2;;chr17:38256877..38256900,-!p2@NR1D1!0.85!20.43!NR1D1;;chr1:8484314..8484348,-!p7@RERE!0.85!17.14!RERE;;chr10:63809134..63809145,+!p6@ARID5B!0.85!14.68!ARID5B;;chr16:79634595..79634620,-!p2@MAF!0.85!11.50!MAF;;chr1:8483723..8483752,-!p12@RERE!0.85!9.75!RERE;;chr6:91006575..91006602,-!p2@BACH2!0.85!9.24!BACH2;;chr12:10865922..10865934,-!p15@CSDA!0.85!6.16!CSDA;;chr11:16627614..16627651,-!p4@SOX6!0.85!6.06!SOX6;;chr17:38256590..38256599,-!p8@NR1D1!0.85!6.06!NR1D1;;chr1:10856694..10856715,-!p3@CASZ1!0.85!6.06!CASZ1;;chr1:165414227..165414242,-!p2@RXRG!0.85!6.06!RXRG;;chr21:40177845..40177863,+!p1@ETS2!0.84!375.23!ETS2;;chr6:41703296..41703367,-!p1@TFEB!0.84!31.93!TFEB;;chr9:73029219..73029289,-!p2@KLF9!0.84!19.10!KLF9;;chr3:5021191..5021202,+!p3@BHLHE40!0.84!16.84!BHLHE40;;chr13:72441315..72441454,-!p1@DACH1!0.84!12.42!DACH1;;chr11:113930355..113930366,+!p5@ZBTB16!0.84!5.95!ZBTB16;;chr2:24714729..24714761,+!p1@NCOA1!0.84!5.95!NCOA1;;chr2:68592406..68592424,+!p1@PLEK!0.84!5.95!PLEK;;chr7:27196217..27196246,-!p2@HOXA7!0.84!5.95!HOXA7;;chr1:165414259..165414273,-!p6@RXRG!0.84!5.95!RXRG;;chr7:27169801..27169844,-!p2@HOXA4!0.84!5.85!HOXA4;;chr2:45236540..45236577,-!p1@SIX2!0.83!5.75!SIX2;;chr1:119530636..119530653,-!p2@TBX15!0.83!5.75!TBX15;;chr2:97202480..97202499,+!p1@ARID5A!0.82!61.70!ARID5A;;chr13:45151259..45151326,-!p2@TSC22D1!0.82!35.83!TSC22D1;;chr4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+|fantom_cat=http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0001134;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002385
+|ffid_belonging_in_development=UBERON:0002532,UBERON:0006603,UBERON:0003104,UBERON:0010316
 |fonse_cell_line=
 |fonse_cell_line_closure=
@@ Line 35: / Line 42: @@
 |fonse_treatment_closure=
 |has_quality=
+|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/skeletal%2520muscle%252c%2520adult%252c%2520pool1.CNhs10629.10023-101D5.hg19.nobarcode.bam
+|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/skeletal%2520muscle%252c%2520adult%252c%2520pool1.CNhs10629.10023-101D5.hg19.ctss.bed.gz
+|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/skeletal%2520muscle%252c%2520adult%252c%2520pool1.CNhs10629.10023-101D5.hg19.nobarcode.rdna.fa.gz
+|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.tissue.hCAGE/skeletal%2520muscle%252c%2520adult%252c%2520pool1.CNhs10629.10023-101D5.hg38.nobarcode.bam
+|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.tissue.hCAGE/skeletal%2520muscle%252c%2520adult%252c%2520pool1.CNhs10629.10023-101D5.hg38.nobarcode.ctss.bed.gz
 |id=FF:10023-101D5
-|is_a=EFO:0002091;;FF:0000004;;FF:0000210;;FF:0010023
+|is_a=EFO:0002091;;FF:0010023
+|is_obsolete=
+|library_id=CNhs10629
+|library_id_phase_based=2:CNhs10629
+|microRNAs=
+|microRNAs_nn=
+|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;10023
+|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;10023
 |name=skeletal muscle, adult, pool1
 |namespace=FANTOM5
@@ Line 42: / Line 61: @@
 |profile_cagescan=,,,
 |profile_hcage=CNhs10629,LSID657,release008,COMPLETED
-|profile_rnaseq=,,,
+|profile_rnaseq=
 |profile_srnaseq=,,,
+|refex=http://refex.dbcls.jp/genelist.php?lang
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 |rna_box=101
 |rna_catalog_number=Cat:AM6000 Lot:0910061 -14
@@ Line 57: / Line 79: @@
 |rna_weight_ug=10
 |sample_age=
+|sample_category=tissues
 |sample_cell_catalog=NA
 |sample_cell_line=
@@ Line 69: / Line 92: @@
 |sample_ethnicity=C
 |sample_experimental_condition=
+|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;1.80666161626941e-217!GO:0005737;cytoplasm;3.07992816759316e-192!GO:0043226;organelle;1.75766259816179e-163!GO:0043229;intracellular organelle;4.90274194258115e-163!GO:0043227;membrane-bound organelle;2.53537214804327e-151!GO:0043231;intracellular membrane-bound organelle;2.53537214804327e-151!GO:0044444;cytoplasmic part;1.67291782590076e-139!GO:0005515;protein binding;9.78037644546268e-101!GO:0044422;organelle part;2.72255043530024e-98!GO:0044446;intracellular organelle part;2.61130144936476e-97!GO:0032991;macromolecular complex;7.42051232198498e-92!GO:0005739;mitochondrion;4.00506666966911e-78!GO:0044238;primary metabolic process;1.06263286634129e-71!GO:0044237;cellular metabolic process;1.56216818849978e-71!GO:0030529;ribonucleoprotein complex;4.661687130954e-69!GO:0043170;macromolecule metabolic process;2.52300358337283e-66!GO:0043233;organelle lumen;1.46839508112381e-63!GO:0031974;membrane-enclosed lumen;1.46839508112381e-63!GO:0003723;RNA binding;9.93421058997059e-58!GO:0005634;nucleus;1.33916733997069e-55!GO:0044429;mitochondrial part;5.5159069286894e-55!GO:0044428;nuclear part;3.09670376518925e-54!GO:0043234;protein complex;2.83552953589101e-49!GO:0019538;protein metabolic process;2.34152231876658e-48!GO:0031967;organelle envelope;5.59436177347752e-45!GO:0031975;envelope;1.02320062733153e-44!GO:0006412;translation;2.15351589887697e-44!GO:0005840;ribosome;2.69654706526664e-44!GO:0044260;cellular macromolecule metabolic process;9.5947387595876e-43!GO:0044267;cellular protein metabolic process;2.16537034936922e-40!GO:0016043;cellular component organization and biogenesis;4.56074038176221e-39!GO:0031090;organelle membrane;7.88487006853861e-39!GO:0003735;structural constituent of ribosome;1.10103108792829e-37!GO:0010467;gene expression;7.46039671233006e-37!GO:0005740;mitochondrial envelope;1.8429342616683e-36!GO:0031966;mitochondrial membrane;1.02631821872294e-35!GO:0043283;biopolymer metabolic process;5.94304630592524e-35!GO:0031981;nuclear lumen;1.41090706906221e-34!GO:0006396;RNA processing;1.51372629404093e-34!GO:0044249;cellular biosynthetic process;5.12622913216483e-34!GO:0033036;macromolecule localization;1.36477587213326e-33!GO:0005829;cytosol;2.03627622290881e-33!GO:0019866;organelle inner membrane;2.41980689337292e-32!GO:0015031;protein transport;5.89744276191727e-32!GO:0033279;ribosomal subunit;6.8726083321901e-32!GO:0005743;mitochondrial inner membrane;2.46382111283196e-31!GO:0009059;macromolecule biosynthetic process;3.58434909107843e-31!GO:0016071;mRNA metabolic process;5.6397134725817e-31!GO:0008380;RNA splicing;7.04810989878891e-31!GO:0008104;protein localization;7.6846262043289e-31!GO:0045184;establishment of protein localization;1.84514931145991e-30!GO:0009058;biosynthetic process;2.82399636865465e-30!GO:0046907;intracellular transport;1.74488309501044e-27!GO:0022613;ribonucleoprotein complex biogenesis and assembly;1.17366288913051e-26!GO:0006397;mRNA processing;6.83795357858355e-26!GO:0065003;macromolecular complex assembly;7.22847450559922e-25!GO:0022607;cellular component assembly;1.5464934100078e-24!GO:0006886;intracellular protein transport;2.74636719764965e-24!GO:0043228;non-membrane-bound organelle;5.69403720161194e-24!GO:0043232;intracellular non-membrane-bound organelle;5.69403720161194e-24!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;2.37481783338042e-23!GO:0006512;ubiquitin cycle;3.60640673548789e-23!GO:0031980;mitochondrial lumen;4.03342815195917e-23!GO:0005759;mitochondrial matrix;4.03342815195917e-23!GO:0044455;mitochondrial membrane part;7.89662603139504e-23!GO:0006119;oxidative phosphorylation;7.99282064174644e-23!GO:0005830;cytosolic ribosome (sensu Eukaryota);2.91202060803039e-21!GO:0005654;nucleoplasm;3.75906295303486e-21!GO:0005746;mitochondrial respiratory chain;1.19217440373563e-20!GO:0008134;transcription factor binding;2.85288100229433e-20!GO:0005681;spliceosome;3.21569590967362e-20!GO:0044451;nucleoplasm part;1.11586827433163e-19!GO:0044445;cytosolic part;7.04068094478242e-19!GO:0051603;proteolysis involved in cellular protein catabolic process;1.02772514719436e-18!GO:0006511;ubiquitin-dependent protein catabolic process;1.65570208124157e-18!GO:0019941;modification-dependent protein catabolic process;1.84911276449598e-18!GO:0043632;modification-dependent macromolecule catabolic process;1.84911276449598e-18!GO:0044265;cellular macromolecule catabolic process;1.96508857422056e-18!GO:0008092;cytoskeletal protein binding;2.31438460702807e-18!GO:0044257;cellular protein catabolic process;5.27127635990278e-18!GO:0022618;protein-RNA complex assembly;5.61185005045757e-18!GO:0000166;nucleotide binding;6.16136329495326e-18!GO:0006996;organelle organization and biogenesis;8.95313377211331e-18!GO:0008135;translation factor activity, nucleic acid binding;1.06120789597224e-17!GO:0050136;NADH dehydrogenase (quinone) activity;2.91564125116184e-17!GO:0003954;NADH dehydrogenase activity;2.91564125116184e-17!GO:0008137;NADH dehydrogenase (ubiquinone) activity;2.91564125116184e-17!GO:0044248;cellular catabolic process;4.09788871105936e-17!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;4.71783863037217e-17!GO:0015935;small ribosomal subunit;8.21347570704762e-17!GO:0016874;ligase activity;2.30050485526633e-16!GO:0051641;cellular localization;2.73864291369332e-16!GO:0051649;establishment of cellular localization;2.99037522392555e-16!GO:0015934;large ribosomal subunit;3.4386026702528e-16!GO:0043285;biopolymer catabolic process;6.37697587644885e-16!GO:0016070;RNA metabolic process;1.06200302032841e-15!GO:0042775;organelle ATP synthesis coupled electron transport;1.10019662759506e-15!GO:0042773;ATP synthesis coupled electron transport;1.10019662759506e-15!GO:0003676;nucleic acid binding;1.92539622195826e-15!GO:0030964;NADH dehydrogenase complex (quinone);2.49945133239617e-15!GO:0045271;respiratory chain complex I;2.49945133239617e-15!GO:0005747;mitochondrial respiratory chain complex I;2.49945133239617e-15!GO:0043412;biopolymer modification;4.28398577315395e-15!GO:0043687;post-translational protein modification;6.66448299533355e-15!GO:0051186;cofactor metabolic process;7.41770591021764e-15!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;8.00019678751121e-15!GO:0009057;macromolecule catabolic process;8.15604959473267e-15!GO:0006457;protein folding;8.21939201572475e-15!GO:0005761;mitochondrial ribosome;9.35012623994574e-15!GO:0000313;organellar ribosome;9.35012623994574e-15!GO:0044449;contractile fiber part;1.12957375537398e-14!GO:0015629;actin cytoskeleton;1.15835712397642e-14!GO:0043292;contractile fiber;1.25258489480771e-14!GO:0005730;nucleolus;1.47820312093018e-14!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;1.95558826150636e-14!GO:0030163;protein catabolic process;2.49046424940487e-14!GO:0006605;protein targeting;2.54843609291638e-14!GO:0000502;proteasome complex (sensu Eukaryota);3.42610437195523e-14!GO:0006464;protein modification process;5.59628803367914e-14!GO:0003712;transcription cofactor activity;5.64038294268499e-14!GO:0048770;pigment granule;8.5815007579131e-14!GO:0042470;melanosome;8.5815007579131e-14!GO:0009055;electron carrier activity;5.33774619231109e-13!GO:0048523;negative regulation of cellular process;9.56010757367205e-13!GO:0030016;myofibril;9.84804229209143e-13!GO:0015980;energy derivation by oxidation of organic compounds;1.49089465243257e-12!GO:0006413;translational initiation;2.05066881230409e-12!GO:0006446;regulation of translational initiation;2.10405593977795e-12!GO:0050789;regulation of biological process;2.83758850627161e-12!GO:0051082;unfolded protein binding;3.10326056839061e-12!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;4.27496946659679e-12!GO:0007517;muscle development;4.67456620756104e-12!GO:0017111;nucleoside-triphosphatase activity;4.84876714204961e-12!GO:0016817;hydrolase activity, acting on acid anhydrides;5.05030165536732e-12!GO:0003743;translation initiation factor activity;5.05030165536732e-12!GO:0006366;transcription from RNA polymerase II promoter;5.64805819640425e-12!GO:0016462;pyrophosphatase activity;5.83205740761661e-12!GO:0003779;actin binding;1.07663012841896e-11!GO:0006461;protein complex assembly;1.4906967237007e-11!GO:0005783;endoplasmic reticulum;1.52106977156503e-11!GO:0017076;purine nucleotide binding;1.52106977156503e-11!GO:0016604;nuclear body;1.84505450784076e-11!GO:0016192;vesicle-mediated transport;1.85407685792292e-11!GO:0008307;structural constituent of muscle;2.34624613728381e-11!GO:0050794;regulation of cellular process;2.49399822995301e-11!GO:0006732;coenzyme metabolic process;3.06587944609435e-11!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);3.24189805384098e-11!GO:0030017;sarcomere;3.45189019912628e-11!GO:0048519;negative regulation of biological process;4.19234413319406e-11!GO:0008639;small protein conjugating enzyme activity;5.47411154059022e-11!GO:0012501;programmed cell death;7.19706272317998e-11!GO:0045333;cellular respiration;7.80573950171829e-11!GO:0032553;ribonucleotide binding;8.67056551158772e-11!GO:0032555;purine ribonucleotide binding;8.67056551158772e-11!GO:0006915;apoptosis;9.39135804910101e-11!GO:0008565;protein transporter activity;1.10963953598156e-10!GO:0004842;ubiquitin-protein ligase activity;1.16823047462122e-10!GO:0006091;generation of precursor metabolites and energy;1.16877643238489e-10!GO:0006913;nucleocytoplasmic transport;1.32247603568563e-10!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);1.41666643473581e-10!GO:0009056;catabolic process;1.66927056934383e-10!GO:0019787;small conjugating protein ligase activity;1.9457949224459e-10!GO:0016564;transcription repressor activity;2.8844125702544e-10!GO:0051169;nuclear transport;3.61032616173449e-10!GO:0005635;nuclear envelope;4.10412111346675e-10!GO:0012505;endomembrane system;5.47053697917166e-10!GO:0009060;aerobic respiration;6.92872656247018e-10!GO:0016607;nuclear speck;7.96284158293778e-10!GO:0048193;Golgi vesicle transport;9.8757900265927e-10!GO:0051246;regulation of protein metabolic process;1.09252943178742e-09!GO:0031965;nuclear membrane;1.40239666239406e-09!GO:0042254;ribosome biogenesis and assembly;1.42334601722577e-09!GO:0008219;cell death;1.49227105923666e-09!GO:0016265;death;1.49227105923666e-09!GO:0000398;nuclear mRNA splicing, via spliceosome;1.50754144089097e-09!GO:0000375;RNA splicing, via transesterification reactions;1.50754144089097e-09!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;1.50754144089097e-09!GO:0017038;protein import;2.39586181591972e-09!GO:0005794;Golgi apparatus;2.92206962718059e-09!GO:0015078;hydrogen ion transmembrane transporter activity;6.06772801843331e-09!GO:0016879;ligase activity, forming carbon-nitrogen bonds;6.41959275240936e-09!GO:0016881;acid-amino acid ligase activity;1.37457470450241e-08!GO:0065007;biological regulation;1.92411539076134e-08!GO:0030554;adenyl nucleotide binding;2.24964179288288e-08!GO:0006084;acetyl-CoA metabolic process;3.28753538977407e-08!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;3.73029168421423e-08!GO:0005768;endosome;3.80264763776876e-08!GO:0003012;muscle system process;4.8107564130092e-08!GO:0006936;muscle contraction;4.8107564130092e-08!GO:0006099;tricarboxylic acid cycle;4.8107564130092e-08!GO:0046356;acetyl-CoA catabolic process;4.8107564130092e-08!GO:0016529;sarcoplasmic reticulum;6.03581307344663e-08!GO:0016528;sarcoplasm;6.03581307344663e-08!GO:0003713;transcription coactivator activity;6.15733830466528e-08!GO:0030036;actin cytoskeleton organization and biogenesis;6.95688390394211e-08!GO:0009892;negative regulation of metabolic process;7.53638173297611e-08!GO:0003714;transcription corepressor activity;7.64672514636057e-08!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;8.7494844203454e-08!GO:0031324;negative regulation of cellular metabolic process;8.93284666466891e-08!GO:0030029;actin filament-based process;9.04177821711514e-08!GO:0032559;adenyl ribonucleotide binding;9.14763534051833e-08!GO:0009109;coenzyme catabolic process;9.93469559267044e-08!GO:0006793;phosphorus metabolic process;9.98477908512836e-08!GO:0006796;phosphate metabolic process;9.98477908512836e-08!GO:0005524;ATP binding;1.05641832024123e-07!GO:0019829;cation-transporting ATPase activity;1.57326433508483e-07!GO:0051187;cofactor catabolic process;1.58673507053557e-07!GO:0006163;purine nucleotide metabolic process;1.98215591900841e-07!GO:0044432;endoplasmic reticulum part;1.99074534867211e-07!GO:0016563;transcription activator activity;2.38505705087898e-07!GO:0006259;DNA metabolic process;3.38597200765182e-07!GO:0044453;nuclear membrane part;3.86308853968261e-07!GO:0051188;cofactor biosynthetic process;4.68785468098808e-07!GO:0051170;nuclear import;4.84148700689096e-07!GO:0006357;regulation of transcription from RNA polymerase II promoter;5.46720420383573e-07!GO:0006606;protein import into nucleus;6.10108147317337e-07!GO:0019899;enzyme binding;6.43950962907773e-07!GO:0005793;ER-Golgi intermediate compartment;8.79288381992426e-07!GO:0000151;ubiquitin ligase complex;8.83835763636596e-07!GO:0015077;monovalent inorganic cation transmembrane transporter activity;9.14670674712727e-07!GO:0015986;ATP synthesis coupled proton transport;9.39343315829573e-07!GO:0015985;energy coupled proton transport, down electrochemical gradient;9.39343315829573e-07!GO:0016887;ATPase activity;9.65560605816416e-07!GO:0009150;purine ribonucleotide metabolic process;9.6910652521542e-07!GO:0016469;proton-transporting two-sector ATPase complex;1.08527647156328e-06!GO:0005643;nuclear pore;1.17950795939221e-06!GO:0005741;mitochondrial outer membrane;1.27774371127616e-06!GO:0016481;negative regulation of transcription;1.49182977947438e-06!GO:0046034;ATP metabolic process;1.52766772597509e-06!GO:0014706;striated muscle development;1.7791971365077e-06!GO:0045259;proton-transporting ATP synthase complex;1.78474438825223e-06!GO:0042981;regulation of apoptosis;2.14054734473013e-06!GO:0032446;protein modification by small protein conjugation;2.55390823701875e-06!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;2.69570769627298e-06!GO:0016491;oxidoreductase activity;2.71126869646028e-06!GO:0009259;ribonucleotide metabolic process;2.91212534418529e-06!GO:0016310;phosphorylation;3.13726468939176e-06!GO:0031252;leading edge;3.33984660893008e-06!GO:0065002;intracellular protein transport across a membrane;3.33984660893008e-06!GO:0043067;regulation of programmed cell death;3.35903768135149e-06!GO:0008361;regulation of cell size;3.54745225044001e-06!GO:0006941;striated muscle contraction;3.86431070908853e-06!GO:0043069;negative regulation of programmed cell death;4.01951293770767e-06!GO:0016567;protein ubiquitination;4.06214757875721e-06!GO:0031968;organelle outer membrane;4.17435899399041e-06!GO:0051427;hormone receptor binding;4.72292068603252e-06!GO:0042623;ATPase activity, coupled;4.77432936165224e-06!GO:0006364;rRNA processing;4.7928905414784e-06!GO:0043066;negative regulation of apoptosis;4.83669062581685e-06!GO:0019867;outer membrane;4.90690047971395e-06!GO:0019222;regulation of metabolic process;4.99952546022014e-06!GO:0006164;purine nucleotide biosynthetic process;5.44052760683696e-06!GO:0016049;cell growth;5.99947184233568e-06!GO:0006916;anti-apoptosis;6.97163575477974e-06!GO:0007519;skeletal muscle development;7.09448712766671e-06!GO:0005770;late endosome;8.23650156388997e-06!GO:0050657;nucleic acid transport;8.68741742560817e-06!GO:0051236;establishment of RNA localization;8.68741742560817e-06!GO:0050658;RNA transport;8.68741742560817e-06!GO:0016072;rRNA metabolic process;9.11845738714665e-06!GO:0006403;RNA localization;9.53797875918057e-06!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;9.79857127409777e-06!GO:0007005;mitochondrion organization and biogenesis;9.84176007332656e-06!GO:0045786;negative regulation of progression through cell cycle;1.03292397816094e-05!GO:0035257;nuclear hormone receptor binding;1.06964498976023e-05!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;1.09074310671757e-05!GO:0004812;aminoacyl-tRNA ligase activity;1.09074310671757e-05!GO:0016875;ligase activity, forming carbon-oxygen bonds;1.09074310671757e-05!GO:0003924;GTPase activity;1.20054713495751e-05!GO:0009199;ribonucleoside triphosphate metabolic process;1.25061625918933e-05!GO:0009205;purine ribonucleoside triphosphate metabolic process;1.25400672445261e-05!GO:0009144;purine nucleoside triphosphate metabolic process;1.25400672445261e-05!GO:0005839;proteasome core complex (sensu Eukaryota);1.40774138891482e-05!GO:0005523;tropomyosin binding;1.49131203037615e-05!GO:0001558;regulation of cell growth;1.63802747887943e-05!GO:0005667;transcription factor complex;1.69766015170231e-05!GO:0009108;coenzyme biosynthetic process;1.89815110134353e-05!GO:0009141;nucleoside triphosphate metabolic process;1.89815110134353e-05!GO:0006754;ATP biosynthetic process;1.95739869335183e-05!GO:0006753;nucleoside phosphate metabolic process;1.95739869335183e-05!GO:0042802;identical protein binding;1.98590859333874e-05!GO:0005773;vacuole;2.15331351604797e-05!GO:0000245;spliceosome assembly;2.19510221056917e-05!GO:0030532;small nuclear ribonucleoprotein complex;2.39183257390082e-05!GO:0005762;mitochondrial large ribosomal subunit;2.53029591726576e-05!GO:0000315;organellar large ribosomal subunit;2.53029591726576e-05!GO:0009152;purine ribonucleotide biosynthetic process;2.55272087561824e-05!GO:0043038;amino acid activation;2.71528959355632e-05!GO:0006418;tRNA aminoacylation for protein translation;2.71528959355632e-05!GO:0043039;tRNA aminoacylation;2.71528959355632e-05!GO:0031674;I band;2.83349092408629e-05!GO:0006950;response to stress;3.00977615614073e-05!GO:0000314;organellar small ribosomal subunit;3.05923821525461e-05!GO:0005763;mitochondrial small ribosomal subunit;3.05923821525461e-05!GO:0005788;endoplasmic reticulum lumen;3.09767642145258e-05!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;3.51403256471517e-05!GO:0046930;pore complex;3.83656803190796e-05!GO:0044440;endosomal part;3.83656803190796e-05!GO:0010008;endosome membrane;3.83656803190796e-05!GO:0030120;vesicle coat;3.83656803190796e-05!GO:0030662;coated vesicle membrane;3.83656803190796e-05!GO:0048475;coated membrane;3.88530801125446e-05!GO:0030117;membrane coat;3.88530801125446e-05!GO:0006888;ER to Golgi vesicle-mediated transport;4.11650103734439e-05!GO:0031202;RNA splicing factor activity, transesterification mechanism;4.56183578730423e-05!GO:0016044;membrane organization and biogenesis;4.73633117846333e-05!GO:0043566;structure-specific DNA binding;5.33845415702006e-05!GO:0005865;striated muscle thin filament;5.40178603441207e-05!GO:0031988;membrane-bound vesicle;5.7215728284891e-05!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;6.23967192966678e-05!GO:0005525;GTP binding;6.23967192966678e-05!GO:0009260;ribonucleotide biosynthetic process;6.45516154668199e-05!GO:0003697;single-stranded DNA binding;6.7243880822188e-05!GO:0031982;vesicle;7.26935232401505e-05!GO:0016568;chromatin modification;7.59226749852491e-05!GO:0051128;regulation of cellular component organization and biogenesis;7.8056851347328e-05!GO:0005798;Golgi-associated vesicle;8.77430197832869e-05!GO:0016023;cytoplasmic membrane-bound vesicle;8.84920953887008e-05!GO:0008026;ATP-dependent helicase activity;0.000108152913618572!GO:0048471;perinuclear region of cytoplasm;0.000113707735677589!GO:0004298;threonine endopeptidase activity;0.000116028174849118!GO:0006974;response to DNA damage stimulus;0.000125179128535587!GO:0048522;positive regulation of cellular process;0.00012935882474211!GO:0005977;glycogen metabolic process;0.000134231191683478!GO:0007010;cytoskeleton organization and biogenesis;0.000139057841331861!GO:0045892;negative regulation of transcription, DNA-dependent;0.000147932402702866!GO:0031410;cytoplasmic vesicle;0.000150116482318659!GO:0000323;lytic vacuole;0.000150968209842306!GO:0005764;lysosome;0.000150968209842306!GO:0042175;nuclear envelope-endoplasmic reticulum network;0.000155224905507349!GO:0009142;nucleoside triphosphate biosynthetic process;0.000156193210395901!GO:0009201;ribonucleoside triphosphate biosynthetic process;0.000156193210395901!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;0.000157652395999079!GO:0009145;purine nucleoside triphosphate biosynthetic process;0.000157652395999079!GO:0006399;tRNA metabolic process;0.000158832575791552!GO:0040008;regulation of growth;0.000158832575791552!GO:0003746;translation elongation factor activity;0.000161104205186063!GO:0009117;nucleotide metabolic process;0.000164259057932704!GO:0051789;response to protein stimulus;0.000165009625776954!GO:0006986;response to unfolded protein;0.000165009625776954!GO:0005789;endoplasmic reticulum membrane;0.000184106400035139!GO:0051028;mRNA transport;0.000184900361466727!GO:0008286;insulin receptor signaling pathway;0.000188873372319391!GO:0030133;transport vesicle;0.000199235750575351!GO:0006414;translational elongation;0.000227935141853212!GO:0043284;biopolymer biosynthetic process;0.00025490576676756!GO:0003724;RNA helicase activity;0.000260877871804463!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.000323334700867386!GO:0015002;heme-copper terminal oxidase activity;0.000323334700867386!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.000323334700867386!GO:0004129;cytochrome-c oxidase activity;0.000323334700867386!GO:0032561;guanyl ribonucleotide binding;0.000348280884975828!GO:0019001;guanyl nucleotide binding;0.000348280884975828!GO:0007243;protein kinase cascade;0.000354855121025053!GO:0043623;cellular protein complex assembly;0.000390128144092091!GO:0044262;cellular carbohydrate metabolic process;0.000410091899852875!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;0.000441828005286973!GO:0006613;cotranslational protein targeting to membrane;0.000463105427345641!GO:0006073;glucan metabolic process;0.000480182701135626!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.000481296212420382!GO:0030518;steroid hormone receptor signaling pathway;0.000485567364124842!GO:0051287;NAD binding;0.000498243478682945!GO:0043021;ribonucleoprotein binding;0.000520126971119413!GO:0004386;helicase activity;0.000534607417925393!GO:0009719;response to endogenous stimulus;0.00057498514771154!GO:0007264;small GTPase mediated signal transduction;0.000581496547638749!GO:0035258;steroid hormone receptor binding;0.000609421767131361!GO:0007050;cell cycle arrest;0.000617400375648354!GO:0006402;mRNA catabolic process;0.000620879787801859!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;0.000661450665458203!GO:0007049;cell cycle;0.000694747803380692!GO:0033017;sarcoplasmic reticulum membrane;0.000703572476644776!GO:0031072;heat shock protein binding;0.000704422030180804!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000708579494329334!GO:0006635;fatty acid beta-oxidation;0.000718341014091611!GO:0051087;chaperone binding;0.000730697270849669!GO:0045941;positive regulation of transcription;0.000730697270849669!GO:0005769;early endosome;0.000742313200369322!GO:0050662;coenzyme binding;0.000793634306241889!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.00081427130597711!GO:0051540;metal cluster binding;0.00081427130597711!GO:0051536;iron-sulfur cluster binding;0.00081427130597711!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.000894641426636692!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.000894641426636692!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.000894641426636692!GO:0022890;inorganic cation transmembrane transporter activity;0.000898961613881938!GO:0006979;response to oxidative stress;0.000899005910079242!GO:0016281;eukaryotic translation initiation factor 4F complex;0.000899015024624522!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.00091349633247954!GO:0000074;regulation of progression through cell cycle;0.000932534419721248!GO:0016197;endosome transport;0.000940804818866838!GO:0051726;regulation of cell cycle;0.0009580570789287!GO:0045893;positive regulation of transcription, DNA-dependent;0.000970766688828136!GO:0044431;Golgi apparatus part;0.00107406998598807!GO:0005665;DNA-directed RNA polymerase II, core complex;0.00107742754077363!GO:0006752;group transfer coenzyme metabolic process;0.00109153276026623!GO:0006325;establishment and/or maintenance of chromatin architecture;0.00113171444782609!GO:0030018;Z disc;0.00124412885354905!GO:0048518;positive regulation of biological process;0.001302745135493!GO:0030521;androgen receptor signaling pathway;0.00132437970875684!GO:0003702;RNA polymerase II transcription factor activity;0.00134680020087778!GO:0006897;endocytosis;0.00135371750419625!GO:0010324;membrane invagination;0.00135371750419625!GO:0031323;regulation of cellular metabolic process;0.0013855096273359!GO:0030880;RNA polymerase complex;0.00141584271442453!GO:0046983;protein dimerization activity;0.0014644042514833!GO:0005852;eukaryotic translation initiation factor 3 complex;0.00147342585008264!GO:0007249;I-kappaB kinase/NF-kappaB cascade;0.00152314259191654!GO:0001726;ruffle;0.00155308811911753!GO:0007265;Ras protein signal transduction;0.00160906670647876!GO:0016772;transferase activity, transferring phosphorus-containing groups;0.00165196851291918!GO:0033673;negative regulation of kinase activity;0.00174304281117758!GO:0006469;negative regulation of protein kinase activity;0.00174304281117758!GO:0015992;proton transport;0.00178527252710568!GO:0005791;rough endoplasmic reticulum;0.00196343666274285!GO:0046314;phosphocreatine biosynthetic process;0.001994986457085!GO:0006603;phosphocreatine metabolic process;0.001994986457085!GO:0008287;protein serine/threonine phosphatase complex;0.00211046326421682!GO:0051252;regulation of RNA metabolic process;0.0021179484987788!GO:0030027;lamellipodium;0.00217341669524655!GO:0006323;DNA packaging;0.00233745426470963!GO:0006818;hydrogen transport;0.00236601071424938!GO:0006118;electron transport;0.00240850185755909!GO:0043488;regulation of mRNA stability;0.00245699441261292!GO:0043487;regulation of RNA stability;0.00245699441261292!GO:0031902;late endosome membrane;0.00251934111407942!GO:0016779;nucleotidyltransferase activity;0.00253404483552995!GO:0045947;negative regulation of translational initiation;0.00261003511567197!GO:0030522;intracellular receptor-mediated signaling pathway;0.00269501082162668!GO:0051920;peroxiredoxin activity;0.00286428863178655!GO:0008186;RNA-dependent ATPase activity;0.0028973285261738!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.00297268698288655!GO:0000428;DNA-directed RNA polymerase complex;0.00297268698288655!GO:0005905;coated pit;0.00302132986557214!GO:0016791;phosphoric monoester hydrolase activity;0.00308206987801875!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;0.0032091838802318!GO:0019752;carboxylic acid metabolic process;0.00325137474780089!GO:0003899;DNA-directed RNA polymerase activity;0.00327248831755209!GO:0006112;energy reserve metabolic process;0.00336221520912855!GO:0006082;organic acid metabolic process;0.00339548654791387!GO:0005856;cytoskeleton;0.00353196971620014!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00356385836602735!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00356385836602735!GO:0006417;regulation of translation;0.00361890061982661!GO:0051168;nuclear export;0.00364572546197556!GO:0019843;rRNA binding;0.00365729750946439!GO:0006839;mitochondrial transport;0.00369654576349264!GO:0016853;isomerase activity;0.00374005141564691!GO:0008654;phospholipid biosynthetic process;0.00375042943887494!GO:0015631;tubulin binding;0.00377686454076891!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.00384256936907513!GO:0030132;clathrin coat of coated pit;0.00387608077281565!GO:0043681;protein import into mitochondrion;0.00387608077281565!GO:0048487;beta-tubulin binding;0.00394187155168372!GO:0001666;response to hypoxia;0.00415954563576551!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.00417659447467933!GO:0006350;transcription;0.00420818380758356!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.00437730392452694!GO:0051539;4 iron, 4 sulfur cluster binding;0.00438633597394404!GO:0019783;small conjugating protein-specific protease activity;0.00451695640976027!GO:0051348;negative regulation of transferase activity;0.00470519147610095!GO:0008180;signalosome;0.00477904851258846!GO:0045454;cell redox homeostasis;0.00478248124888551!GO:0004843;ubiquitin-specific protease activity;0.0049479324698889!GO:0031326;regulation of cellular biosynthetic process;0.0052992299095294!GO:0016859;cis-trans isomerase activity;0.00538586271122591!GO:0006401;RNA catabolic process;0.00540221253481481!GO:0048741;skeletal muscle fiber development;0.00564604726387234!GO:0048747;muscle fiber development;0.00564604726387234!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.00571777703637764!GO:0007006;mitochondrial membrane organization and biogenesis;0.0057524164659686!GO:0030867;rough endoplasmic reticulum membrane;0.00584063720341494!GO:0010468;regulation of gene expression;0.0058857761431091!GO:0005048;signal sequence binding;0.00605299057077261!GO:0009889;regulation of biosynthetic process;0.00617624709411886!GO:0005790;smooth endoplasmic reticulum;0.00652486491919555!GO:0005869;dynactin complex;0.00687749792492156!GO:0006607;NLS-bearing substrate import into nucleus;0.00688338995012553!GO:0019395;fatty acid oxidation;0.00694010699328012!GO:0006612;protein targeting to membrane;0.00705596832086961!GO:0006006;glucose metabolic process;0.00708607279229692!GO:0004004;ATP-dependent RNA helicase activity;0.00714590968352799!GO:0051289;protein homotetramerization;0.00735637206371867!GO:0004674;protein serine/threonine kinase activity;0.00738832858723857!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.00771437490507149!GO:0015399;primary active transmembrane transporter activity;0.00771437490507149!GO:0015036;disulfide oxidoreductase activity;0.00804928534258786!GO:0042805;actinin binding;0.00819281203935214!GO:0045098;type III intermediate filament;0.00833280057585164!GO:0008139;nuclear localization sequence binding;0.00836983180484409!GO:0007179;transforming growth factor beta receptor signaling pathway;0.00848644719923449!GO:0005813;centrosome;0.00859323614543537!GO:0004721;phosphoprotein phosphatase activity;0.00865239390710647!GO:0003729;mRNA binding;0.0089293271083499!GO:0004722;protein serine/threonine phosphatase activity;0.00893796740377412!GO:0004221;ubiquitin thiolesterase activity;0.00916940823136925!GO:0006595;polyamine metabolic process;0.0092290426792952!GO:0065009;regulation of a molecular function;0.0094896797139351!GO:0005859;muscle myosin complex;0.0095780175531418!GO:0031625;ubiquitin protein ligase binding;0.00989574902388443!GO:0008234;cysteine-type peptidase activity;0.0100071856685084!GO:0005862;muscle thin filament tropomyosin;0.0100973174302498!GO:0051098;regulation of binding;0.0101388068584342!GO:0006942;regulation of striated muscle contraction;0.010321058201771!GO:0006281;DNA repair;0.0104565809522894!GO:0048500;signal recognition particle;0.0104565809522894!GO:0005885;Arp2/3 protein complex;0.0105970105848321!GO:0048468;cell development;0.0106478792560041!GO:0030663;COPI coated vesicle membrane;0.0107056062756875!GO:0030126;COPI vesicle coat;0.0107056062756875!GO:0000059;protein import into nucleus, docking;0.0108503893211839!GO:0019902;phosphatase binding;0.0108936621911257!GO:0033018;sarcoplasmic reticulum lumen;0.0113760213369238!GO:0003690;double-stranded DNA binding;0.0113760213369238!GO:0031032;actomyosin structure organization and biogenesis;0.0119720558217921!GO:0030118;clathrin coat;0.0124235287387063!GO:0050681;androgen receptor binding;0.0124235287387063!GO:0016787;hydrolase activity;0.0132338808247333!GO:0005912;adherens junction;0.013415661782888!GO:0005774;vacuolar membrane;0.0138792326917613!GO:0009165;nucleotide biosynthetic process;0.0139878057692608!GO:0009966;regulation of signal transduction;0.0141920661647677!GO:0006891;intra-Golgi vesicle-mediated transport;0.0141920661647677!GO:0016627;oxidoreductase activity, acting on the CH-CH group of donors;0.0142327760616099!GO:0004177;aminopeptidase activity;0.014313937690087!GO:0006007;glucose catabolic process;0.0144336469305235!GO:0044264;cellular polysaccharide metabolic process;0.0144336469305235!GO:0008017;microtubule binding;0.0145766348982871!GO:0008250;oligosaccharyl transferase complex;0.0148606476361234!GO:0006626;protein targeting to mitochondrion;0.0150848820127766!GO:0008383;manganese superoxide dismutase activity;0.0150852424218004!GO:0001315;age-dependent response to reactive oxygen species;0.0150852424218004!GO:0006354;RNA elongation;0.0152456491668183!GO:0016460;myosin II complex;0.0158104148821736!GO:0048037;cofactor binding;0.0163580292356997!GO:0050811;GABA receptor binding;0.0164796415199089!GO:0044452;nucleolar part;0.0164796415199089!GO:0045792;negative regulation of cell size;0.0165919454773647!GO:0006260;DNA replication;0.0165962408291715!GO:0051493;regulation of cytoskeleton organization and biogenesis;0.0167470359362643!GO:0033043;regulation of organelle organization and biogenesis;0.0167470359362643!GO:0001725;stress fiber;0.0167470359362643!GO:0032432;actin filament bundle;0.0167470359362643!GO:0051129;negative regulation of cellular component organization and biogenesis;0.0171853827828553!GO:0016272;prefoldin complex;0.0175399889886577!GO:0035035;histone acetyltransferase binding;0.0175399889886577!GO:0006650;glycerophospholipid metabolic process;0.0175860046515461!GO:0045445;myoblast differentiation;0.0177520120610438!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.01789568620486!GO:0005976;polysaccharide metabolic process;0.0187632575042046!GO:0046474;glycerophospholipid biosynthetic process;0.0188025762726251!GO:0000122;negative regulation of transcription from RNA polymerase II promoter;0.0192248812061637!GO:0016311;dephosphorylation;0.0194660911327993!GO:0030658;transport vesicle membrane;0.0197742831947343!GO:0030308;negative regulation of cell growth;0.0200337764344866!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.0200337764344866!GO:0017166;vinculin binding;0.0202308353520809!GO:0031589;cell-substrate adhesion;0.0202308353520809!GO:0051248;negative regulation of protein metabolic process;0.0206164689073057!GO:0030055;cell-matrix junction;0.020681694563424!GO:0022402;cell cycle process;0.0213667136683387!GO:0008154;actin polymerization and/or depolymerization;0.0215143150827016!GO:0030100;regulation of endocytosis;0.0219770006219817!GO:0006352;transcription initiation;0.0219911884754305!GO:0030140;trans-Golgi network transport vesicle;0.0222761546756912!GO:0016790;thiolester hydrolase activity;0.0223505506774867!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.0225387966572936!GO:0006383;transcription from RNA polymerase III promoter;0.0230207901753086!GO:0047485;protein N-terminus binding;0.0231050950445119!GO:0007242;intracellular signaling cascade;0.023106256906939!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.0231174266682224!GO:0016363;nuclear matrix;0.0238545274447323!GO:0019318;hexose metabolic process;0.0238976354261191!GO:0003711;transcription elongation regulator activity;0.0238976354261191!GO:0005924;cell-substrate adherens junction;0.0241627462691855!GO:0030137;COPI-coated vesicle;0.0242205906589091!GO:0032981;mitochondrial respiratory chain complex I assembly;0.0243314675335746!GO:0010257;NADH dehydrogenase complex assembly;0.0243314675335746!GO:0033108;mitochondrial respiratory chain complex assembly;0.0243314675335746!GO:0043492;ATPase activity, coupled to movement of substances;0.0244570270684136!GO:0006376;mRNA splice site selection;0.0245426592496765!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0245426592496765!GO:0007266;Rho protein signal transduction;0.0247072223603288!GO:0016740;transferase activity;0.0248357161521426!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.0248357161521426!GO:0045047;protein targeting to ER;0.0248357161521426!GO:0005853;eukaryotic translation elongation factor 1 complex;0.0248454484828065!GO:0008312;7S RNA binding;0.025441664445656!GO:0019903;protein phosphatase binding;0.027097396116847!GO:0006611;protein export from nucleus;0.0273154718476769!GO:0004576;oligosaccharyl transferase activity;0.0274438429635288!GO:0005815;microtubule organizing center;0.0280983151709831!GO:0019208;phosphatase regulator activity;0.0285217321195646!GO:0009893;positive regulation of metabolic process;0.0293427783382036!GO:0051101;regulation of DNA binding;0.0295274696786297!GO:0005765;lysosomal membrane;0.0298960480331421!GO:0048041;focal adhesion formation;0.0302138195594447!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.0304805034375318!GO:0017015;regulation of transforming growth factor beta receptor signaling pathway;0.0306563169139454!GO:0051276;chromosome organization and biogenesis;0.0307427701161962!GO:0000139;Golgi membrane;0.0307427701161962!GO:0019904;protein domain specific binding;0.0311910030682012!GO:0051393;alpha-actinin binding;0.0314408815328145!GO:0016405;CoA-ligase activity;0.0317362394021891!GO:0019219;regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.0320338266950495!GO:0006778;porphyrin metabolic process;0.0327637988289266!GO:0033013;tetrapyrrole metabolic process;0.0327637988289266!GO:0005832;chaperonin-containing T-complex;0.0327637988289266!GO:0051260;protein homooligomerization;0.0328619696564014!GO:0005861;troponin complex;0.0329215507949391!GO:0006892;post-Golgi vesicle-mediated transport;0.0333311585735261!GO:0030134;ER to Golgi transport vesicle;0.0335499045670385!GO:0000288;mRNA catabolic process, deadenylation-dependent decay;0.0339652214396534!GO:0017022;myosin binding;0.0340452522236725!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.034535939995165!GO:0000159;protein phosphatase type 2A complex;0.0348748978933499!GO:0008601;protein phosphatase type 2A regulator activity;0.0353884244841686!GO:0009967;positive regulation of signal transduction;0.0353989541790515!GO:0006518;peptide metabolic process;0.0354220316625203!GO:0000209;protein polyubiquitination;0.0358339807501607!GO:0043065;positive regulation of apoptosis;0.0367152209377016!GO:0005684;U2-dependent spliceosome;0.0373941512480533!GO:0006695;cholesterol biosynthetic process;0.0375986218602764!GO:0007034;vacuolar transport;0.0376528786151586!GO:0031111;negative regulation of microtubule polymerization or depolymerization;0.0377373746475254!GO:0006631;fatty acid metabolic process;0.0379506556637661!GO:0044437;vacuolar part;0.0379506556637661!GO:0031461;cullin-RING ubiquitin ligase complex;0.0380955559318612!GO:0007160;cell-matrix adhesion;0.0380955559318612!GO:0001944;vasculature development;0.0385225419828585!GO:0048659;smooth muscle cell proliferation;0.0385542221908116!GO:0005996;monosaccharide metabolic process;0.0386246921853279!GO:0016251;general RNA polymerase II transcription factor activity;0.0389071921775278!GO:0016126;sterol biosynthetic process;0.0394349011357112!GO:0033116;ER-Golgi intermediate compartment membrane;0.0398393433717705!GO:0043022;ribosome binding;0.040900911937921!GO:0030660;Golgi-associated vesicle membrane;0.0419914521992058!GO:0051262;protein tetramerization;0.0421589262805503!GO:0006351;transcription, DNA-dependent;0.0422332509328929!GO:0032774;RNA biosynthetic process;0.0432051354893269!GO:0030911;TPR domain binding;0.0434708069458469!GO:0000060;protein import into nucleus, translocation;0.043637030769099!GO:0006779;porphyrin biosynthetic process;0.043637030769099!GO:0033014;tetrapyrrole biosynthetic process;0.043637030769099!GO:0004111;creatine kinase activity;0.043637030769099!GO:0014866;skeletal myofibril assembly;0.0446300045872949!GO:0032787;monocarboxylic acid metabolic process;0.0448478324716136!GO:0000096;sulfur amino acid metabolic process;0.0455181619946209!GO:0043068;positive regulation of programmed cell death;0.0468309695834359!GO:0055001;muscle cell development;0.0473149572097984!GO:0030239;myofibril assembly;0.0473149572097984!GO:0055002;striated muscle cell development;0.0473149572097984!GO:0006937;regulation of muscle contraction;0.0474869386111047!GO:0015630;microtubule cytoskeleton;0.0476013361820885!GO:0051370;ZASP binding;0.0476623223599296!GO:0051374;FATZ 1 binding;0.0476623223599296!GO:0008629;induction of apoptosis by intracellular signals;0.0479787478093205!GO:0031901;early endosome membrane;0.0482812789346424!GO:0046467;membrane lipid biosynthetic process;0.0489037437331808!GO:0004300;enoyl-CoA hydratase activity;0.0497208760332068!GO:0032535;regulation of cellular component size;0.0497733750317337
 |sample_id=10023
 |sample_note=
@@ Line 76: / Line 100: @@
 |sample_tissue=skeletal muscle
 |top_motifs=MEF2{A,B,C,D}:7.94112847148;NR1H4:4.79944954124;FOXL1:3.8639796894;NFE2L1:3.71903709557;NR5A1,2:3.68661967348;AR:3.5408665247;ESRRA:3.50270092203;PDX1:3.46119976025;MYOD1:3.2871534463;NKX2-2,8:3.07178063432;TLX2:2.81596630824;HOX{A4,D4}:2.80642997834;MAFB:2.59615221606;SPZ1:2.58014873508;NFIX:2.48063006716;NHLH1,2:2.47500766093;TGIF1:2.40807532562;NR6A1:2.3551834701;SOX5:2.34132470459;SRF:2.25641150569;RORA:2.24994654335;SMAD1..7,9:2.24283925828;RXR{A,B,G}_{NR1H2,PPAR}dimers:2.17747406279;RXR{A,B,G}:2.08012308852;ESR1:2.02000651855;NKX3-2:1.91514384142;IKZF2:1.87666225722;ATF2:1.84036222831;FOX{D1,D2}:1.79331719837;TFAP4:1.77989921921;POU6F1:1.7230746314;HAND1,2:1.71420106306;STAT5{A,B}:1.69581654742;TFAP2{A,C}:1.66921412162;FOXQ1:1.6198897969;HSF1,2:1.54954267298;PATZ1:1.52892243887;NFATC1..3:1.52630459572;EVI1:1.42977058049;FOXO1,3,4:1.41116901982;CUX2:1.39895568459;TBP:1.38139153605;PAX6:1.37459136533;HES1:1.37305026087;YY1:1.36909851296;NKX6-1,2:1.3674591793;GCM1,2:1.36703636086;GATA4:1.34804799248;POU1F1:1.31864559645;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:1.2668402868;HOX{A6,A7,B6,B7}:1.20726178227;ARID5B:1.1990256978;FOXP3:1.18370179883;GLI1..3:1.16266494615;BPTF:1.16098199012;FOX{F1,F2,J1}:1.14850451471;POU3F1..4:1.10880089968;MTF1:1.09038928986;UFEwm:1.02721790148;TFCP2:1.00924977493;GTF2A1,2:0.992661725573;RREB1:0.989763978833;STAT2,4,6:0.983410558029;TLX1..3_NFIC{dimer}:0.972702705279;FOXM1:0.953672221865;LMO2:0.948526721194;HIC1:0.933309682992;PAX1,9:0.915737126536;ZNF423:0.882579180557;ALX4:0.878687935716;MAZ:0.850713235121;MYBL2:0.756223010045;EN1,2:0.752096333372;TEAD1:0.745389816878;IKZF1:0.709449773568;TFAP2B:0.690756274676;LEF1_TCF7_TCF7L1,2:0.680223012289;TBX4,5:0.674717660743;ZIC1..3:0.65583877547;IRF7:0.654399922835;NR3C1:0.639786897769;MYFfamily:0.62373291495;MED-1{core}:0.614301731934;RFX2..5_RFXANK_RFXAP:0.609044896646;ATF4:0.57650955933;SREBF1,2:0.565816001166;KLF4:0.530140824838;NKX2-1,4:0.521162114957;MTE{core}:0.519990993944;MZF1:0.500609784639;PBX1:0.492579157707;bHLH_family:0.479144623901;TP53:0.478230757145;ZBTB16:0.46809468577;GFI1B:0.449640911061;CDX1,2,4:0.422081366599;REST:0.420605209421;PPARG:0.399161589704;SNAI1..3:0.387069031573;EGR1..3:0.379037423282;ZNF238:0.35590460711;JUN:0.349451544471;DMAP1_NCOR{1,2}_SMARC:0.349302485212;GTF2I:0.344186303116;SP1:0.297569996932;ZNF384:0.292003337706;XBP1:0.284373933871;HMX1:0.2436941172;HNF4A_NR2F1,2:0.23847185036;ALX1:0.234402691845;PAX5:0.226382094609;ZFP161:0.20258500328;FOSL2:0.20058807087;RXRA_VDR{dimer}:0.184530874744;NFE2L2:0.123784563426;HMGA1,2:0.100889366495;ZNF148:0.1002359861;TEF:0.0867792229707;RBPJ:0.0676979977482;EP300:0.0673385880823;FOXA2:0.0669961028744;NANOG{mouse}:0.0562242851893;TAL1_TCF{3,4,12}:0.0483090244245;NFE2:0.0449240229532;PAX2:0.0359761414503;CEBPA,B_DDIT3:0.0315410125232;ZNF143:0.0294035069586;SOX{8,9,10}:0.0261638042258;HLF:0.0085376706691;BREu{core}:-0.0171651001091;PAX3,7:-0.0291010359768;ATF5_CREB3:-0.0348208735992;ZBTB6:-0.0381120171425;LHX3,4:-0.101125298696;ETS1,2:-0.155550906697;SOX17:-0.176995620099;NKX2-3_NKX2-5:-0.184125607147;ATF6:-0.190872537134;FOXN1:-0.192946746868;FOX{I1,J2}:-0.194954234649;NKX3-1:-0.204146809591;ZEB1:-0.215101761785;SPI1:-0.224703866598;CRX:-0.253605201899;IRF1,2:-0.275727666611;HNF1A:-0.294951463604;PRDM1:-0.324282524928;NFKB1_REL_RELA:-0.338895247863;STAT1,3:-0.361242915572;GZF1:-0.396132840642;HOX{A5,B5}:-0.43745760284;NFIL3:-0.448804981764;FOS_FOS{B,L1}_JUN{B,D}:-0.464467262692;SPIB:-0.467806277027;NRF1:-0.511474368602;BACH2:-0.589417966393;T:-0.649643162635;PITX1..3:-0.680436242592;ELF1,2,4:-0.685344922779;EBF1:-0.700607703341;GATA6:-0.706621817034;NANOG:-0.773405349523;HBP1_HMGB_SSRP1_UBTF:-0.785446293272;AHR_ARNT_ARNT2:-0.807705421297;PAX4:-0.812889197401;RUNX1..3:-0.818998441277;CREB1:-0.845375117909;TOPORS:-0.8544630775;NFY{A,B,C}:-0.862222990676;E2F1..5:-0.87025801861;TFDP1:-0.923697806177;HOXA9_MEIS1:-0.948638603929;FOXP1:-0.99315643176;PRRX1,2:-1.06973431544;CDC5L:-1.12493468093;OCT4_SOX2{dimer}:-1.14689585632;ONECUT1,2:-1.15688336308;XCPE1{core}:-1.24799380652;ADNP_IRX_SIX_ZHX:-1.25254288845;MYB:-1.25470719103;RFX1:-1.28115550972;GFI1:-1.315990732;SOX2:-1.32813318954;FOXD3:-1.39414290465;HIF1A:-1.44059983554;ELK1,4_GABP{A,B1}:-1.45562233041;VSX1,2:-1.61198434344;DBP:-1.71340317384;AIRE:-1.82489173902;POU5F1:-2.01468768523;POU2F1..3:-2.13134231287;PAX8:-2.35739812734
+|xref=
+|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:10023-101D5;search_select_hide=table117:FF:10023-101D5
 }}

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FF:10023-101D5: Difference between revisions

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Latest revision as of 12:14, 3 June 2020

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	Mozilla Cavendish skin modified by DaSch for the Web Community Wiki GitHub project page – Report a bug – Skin version: 2.6.0